View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20038_low_10 (Length: 271)
Name: NF20038_low_10
Description: NF20038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20038_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 41705817 - 41706077
Alignment:
| Q |
1 |
caatcccaacgttcgcctatgtttgttatgactacttgacacatgattcatgtgtcaagtacgttagagttacattgttaatatctgttagtgaattcag |
100 |
Q |
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| T |
41705817 |
caatcccaacgttcgcctatgtttgttatgactacttgacacatgattcatgtgtcaagtacgttagagttacactgttaatatctgttagtgaattcag |
41705916 |
T |
|
| Q |
101 |
ggttcaaacaattgatataatatttaaaacgcatcatcaattagaacaacaacaaccaagtcttatcgcagtagcattaagtggggccgactacacagag |
200 |
Q |
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||||||||||| ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| |
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| T |
41705917 |
ggttcaaacaactgatagaatgtttaaaatgcatcatcaactagaacaacaacaaccaagtcttatcgcagtagtactaagtggggcctactacacagag |
41706016 |
T |
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| Q |
201 |
aatgtttaaaacacatgttaagataatttccttatccatcactattactactatatctctg |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41706017 |
aatgtttaaaacacatgttaagataatttccttatccatcactattactactatatgtctg |
41706077 |
T |
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