View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20042_high_2 (Length: 650)

Name: NF20042_high_2
Description: NF20042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20042_high_2
NF20042_high_2
[»] chr4 (48 HSPs)
chr4 (396-647)||(43901753-43902002)
chr4 (1-196)||(43901549-43901744)
chr4 (208-386)||(28982732-28982922)
chr4 (208-386)||(35017733-35017922)
chr4 (208-356)||(33703183-33703331)
chr4 (212-356)||(27864606-27864750)
chr4 (212-356)||(27893756-27893900)
chr4 (208-386)||(1771176-1771366)
chr4 (208-356)||(25051735-25051883)
chr4 (208-356)||(27550351-27550499)
chr4 (208-384)||(43514596-43514784)
chr4 (208-350)||(43735790-43735932)
chr4 (208-372)||(51512175-51512339)
chr4 (212-356)||(55966260-55966404)
chr4 (208-356)||(27316622-27316771)
chr4 (208-356)||(23036022-23036170)
chr4 (212-356)||(31680944-31681088)
chr4 (208-356)||(43949711-43949859)
chr4 (224-356)||(39631143-39631275)
chr4 (212-356)||(48463364-48463508)
chr4 (208-348)||(23204688-23204828)
chr4 (211-386)||(12496956-12497143)
chr4 (246-384)||(46412417-46412557)
chr4 (212-356)||(41848013-41848157)
chr4 (212-356)||(45490227-45490371)
chr4 (208-337)||(21687067-21687196)
chr4 (237-344)||(41878460-41878567)
chr4 (233-335)||(41327478-41327580)
chr4 (212-356)||(28988515-28988658)
chr4 (212-371)||(56215812-56215970)
chr4 (299-386)||(36004117-36004204)
chr4 (489-571)||(51305282-51305364)
chr4 (485-601)||(34113300-34113417)
chr4 (487-575)||(47492020-47492109)
chr4 (299-356)||(17619153-17619210)
chr4 (299-356)||(55272377-55272434)
chr4 (310-356)||(35037047-35037093)
chr4 (299-356)||(19879996-19880053)
chr4 (347-386)||(25051693-25051732)
chr4 (212-278)||(19880074-19880140)
chr4 (212-278)||(35037125-35037190)
chr4 (212-278)||(55272290-55272356)
chr4 (299-356)||(712002-712059)
chr4 (299-356)||(38851555-38851612)
chr4 (299-356)||(48435580-48435637)
chr4 (350-386)||(711960-711996)
chr4 (347-383)||(23204839-23204875)
chr4 (358-386)||(28988473-28988501)
[»] chr2 (36 HSPs)
chr2 (208-386)||(42849769-42849946)
chr2 (208-356)||(19047199-19047347)
chr2 (208-356)||(30838674-30838822)
chr2 (208-356)||(4764636-4764784)
chr2 (208-386)||(1750414-1750604)
chr2 (210-386)||(12302165-12302353)
chr2 (208-356)||(43335673-43335821)
chr2 (208-384)||(43490311-43490499)
chr2 (208-386)||(16096747-16096938)
chr2 (208-348)||(39149204-39149342)
chr2 (239-356)||(13780676-13780793)
chr2 (208-356)||(34817686-34817834)
chr2 (211-344)||(42026823-42026956)
chr2 (259-337)||(8896544-8896622)
chr2 (304-356)||(33229344-33229396)
chr2 (299-356)||(43114599-43114656)
chr2 (353-385)||(19047158-19047190)
chr2 (227-270)||(12415389-12415432)
chr2 (227-270)||(12427449-12427492)
chr2 (212-278)||(11825568-11825634)
chr2 (212-278)||(34895655-34895721)
chr2 (299-344)||(4451951-4451996)
chr2 (347-384)||(7070418-7070455)
chr2 (299-356)||(11825655-11825712)
chr2 (299-356)||(12415461-12415518)
chr2 (299-356)||(12427521-12427578)
chr2 (299-356)||(34895742-34895799)
chr2 (299-356)||(41281975-41282032)
chr2 (350-386)||(966898-966934)
chr2 (350-386)||(4764790-4764826)
chr2 (350-386)||(16803968-16804004)
chr2 (350-386)||(16843250-16843286)
chr2 (350-386)||(18491705-18491741)
chr2 (232-295)||(19930830-19930894)
chr2 (230-273)||(27864728-27864772)
chr2 (350-386)||(43114557-43114593)
[»] chr3 (32 HSPs)
chr3 (208-386)||(46941053-46941243)
chr3 (208-386)||(52629840-52630018)
chr3 (208-356)||(40808907-40809055)
chr3 (208-385)||(42394329-42394518)
chr3 (208-356)||(54237138-54237286)
chr3 (212-356)||(36150172-36150316)
chr3 (208-348)||(40480799-40480939)
chr3 (208-386)||(54246058-54246248)
chr3 (208-356)||(24688312-24688460)
chr3 (208-386)||(47190936-47191125)
chr3 (208-386)||(25413681-25413871)
chr3 (212-356)||(45126842-45126986)
chr3 (208-348)||(53581768-53581908)
chr3 (208-386)||(42100688-42100878)
chr3 (208-304)||(1078312-1078408)
chr3 (212-348)||(27748613-27748740)
chr3 (212-356)||(51249350-51249494)
chr3 (208-356)||(53273603-53273742)
chr3 (231-338)||(11064655-11064762)
chr3 (212-278)||(10457806-10457872)
chr3 (299-356)||(9434166-9434223)
chr3 (299-356)||(10457893-10457950)
chr3 (212-296)||(29556873-29556956)
chr3 (353-385)||(54237097-54237129)
chr3 (227-278)||(9434244-9434295)
chr3 (347-386)||(36150130-36150169)
chr3 (310-356)||(25996310-25996356)
chr3 (232-294)||(45058564-45058626)
chr3 (299-348)||(4190266-4190315)
chr3 (299-356)||(51757635-51757692)
chr3 (350-386)||(4190329-4190365)
chr3 (226-270)||(19148896-19148940)
[»] chr1 (31 HSPs)
chr1 (208-386)||(5489776-5489966)
chr1 (208-386)||(43570996-43571186)
chr1 (208-356)||(48498872-48499020)
chr1 (208-386)||(4888055-4888232)
chr1 (208-356)||(24769409-24769557)
chr1 (208-356)||(4401370-4401518)
chr1 (212-356)||(37814820-37814964)
chr1 (208-351)||(7447872-7448015)
chr1 (208-356)||(750215-750363)
chr1 (212-356)||(2497476-2497620)
chr1 (208-348)||(50448170-50448310)
chr1 (212-353)||(23989437-23989578)
chr1 (486-610)||(15504229-15504354)
chr1 (299-356)||(48119670-48119727)
chr1 (487-610)||(2260079-2260203)
chr1 (299-356)||(35003336-35003393)
chr1 (299-356)||(38335960-38336017)
chr1 (299-356)||(44112719-44112776)
chr1 (299-356)||(46168425-46168482)
chr1 (486-564)||(17302328-17302407)
chr1 (299-356)||(41065195-41065252)
chr1 (229-278)||(44112797-44112846)
chr1 (299-356)||(45427746-45427803)
chr1 (299-356)||(45639733-45639790)
chr1 (299-356)||(45705867-45705924)
chr1 (350-386)||(14427347-14427383)
chr1 (350-386)||(35003294-35003330)
chr1 (226-278)||(35003414-35003466)
chr1 (350-386)||(41065153-41065189)
chr1 (226-278)||(41065271-41065323)
chr1 (350-386)||(44112677-44112713)
[»] chr8 (32 HSPs)
chr8 (208-386)||(9241564-9241742)
chr8 (208-386)||(42197345-42197535)
chr8 (208-356)||(30660652-30660800)
chr8 (211-356)||(29705404-29705549)
chr8 (208-386)||(36743393-36743583)
chr8 (212-356)||(29800864-29801008)
chr8 (208-356)||(31384706-31384854)
chr8 (211-386)||(11582766-11582953)
chr8 (208-356)||(2547038-2547186)
chr8 (212-356)||(20148802-20148946)
chr8 (212-356)||(26125677-26125820)
chr8 (208-384)||(30912472-30912660)
chr8 (208-357)||(45397357-45397505)
chr8 (208-356)||(3743813-3743961)
chr8 (210-353)||(2165875-2166018)
chr8 (208-384)||(42295197-42295384)
chr8 (229-356)||(5754945-5755072)
chr8 (212-356)||(1375584-1375728)
chr8 (229-356)||(40528565-40528692)
chr8 (299-386)||(10678153-10678240)
chr8 (302-384)||(42699259-42699353)
chr8 (351-386)||(28977146-28977181)
chr8 (347-385)||(45397317-45397355)
chr8 (299-356)||(18066719-18066776)
chr8 (299-356)||(34304830-34304887)
chr8 (299-356)||(35181558-35181615)
chr8 (347-386)||(2166024-2166063)
chr8 (232-286)||(30479493-30479548)
chr8 (212-278)||(34304908-34304973)
chr8 (233-278)||(18066653-18066698)
chr8 (350-386)||(19386634-19386670)
chr8 (350-386)||(35181516-35181552)
[»] scaffold0038 (2 HSPs)
scaffold0038 (208-356)||(112697-112845)
scaffold0038 (353-385)||(112656-112688)
[»] chr7 (33 HSPs)
chr7 (208-356)||(43343534-43343682)
chr7 (208-356)||(44416844-44416992)
chr7 (211-386)||(24000925-24001112)
chr7 (211-386)||(42538344-42538531)
chr7 (211-356)||(32029730-32029875)
chr7 (212-356)||(5015437-5015581)
chr7 (208-356)||(16180267-16180415)
chr7 (208-386)||(5810834-5811024)
chr7 (212-356)||(44326220-44326364)
chr7 (211-356)||(42972894-42973039)
chr7 (208-356)||(35069763-35069911)
chr7 (209-348)||(27393171-27393310)
chr7 (224-356)||(38160505-38160637)
chr7 (212-356)||(45326062-45326206)
chr7 (212-350)||(26898316-26898454)
chr7 (212-356)||(4638113-4638257)
chr7 (212-356)||(41861716-41861862)
chr7 (212-356)||(10573791-10573935)
chr7 (210-351)||(9216348-9216489)
chr7 (231-339)||(43317502-43317610)
chr7 (231-356)||(5194164-5194289)
chr7 (259-337)||(24280557-24280635)
chr7 (212-318)||(47279638-47279744)
chr7 (212-278)||(27535145-27535211)
chr7 (299-353)||(31513332-31513386)
chr7 (353-386)||(38160661-38160694)
chr7 (355-386)||(9216302-9216333)
chr7 (212-278)||(31408547-31408613)
chr7 (310-356)||(40236961-40237007)
chr7 (212-278)||(40237039-40237105)
chr7 (299-356)||(31408634-31408691)
chr7 (358-386)||(41861674-41861702)
chr7 (232-275)||(46033831-46033875)
[»] chr6 (20 HSPs)
chr6 (208-356)||(24203897-24204045)
chr6 (208-351)||(21279976-21280119)
chr6 (211-386)||(9698246-9698433)
chr6 (208-386)||(30014343-30014533)
chr6 (212-356)||(3213442-3213586)
chr6 (212-356)||(21293591-21293735)
chr6 (212-356)||(7292789-7292933)
chr6 (208-356)||(30736024-30736172)
chr6 (209-356)||(7367591-7367738)
chr6 (208-386)||(7273245-7273435)
chr6 (212-386)||(26669923-26670109)
chr6 (212-356)||(13743135-13743279)
chr6 (212-356)||(13748635-13748779)
chr6 (208-386)||(26466799-26466989)
chr6 (299-348)||(27441592-27441641)
chr6 (299-356)||(33242445-33242502)
chr6 (227-278)||(27441662-27441713)
chr6 (350-384)||(24204051-24204085)
chr6 (212-278)||(33242523-33242589)
chr6 (299-356)||(33253955-33254012)
[»] chr5 (22 HSPs)
chr5 (211-386)||(2614562-2614749)
chr5 (208-386)||(18033982-18034172)
chr5 (212-356)||(5257037-5257181)
chr5 (212-356)||(41334577-41334721)
chr5 (231-386)||(22512305-22512472)
chr5 (208-356)||(7617175-7617323)
chr5 (208-356)||(33801511-33801659)
chr5 (212-356)||(38470621-38470765)
chr5 (208-304)||(25914906-25915002)
chr5 (246-351)||(39122381-39122486)
chr5 (212-311)||(39122270-39122369)
chr5 (347-386)||(33855104-33855143)
chr5 (489-565)||(11429808-11429888)
chr5 (299-356)||(17208116-17208173)
chr5 (351-384)||(25915052-25915085)
chr5 (299-356)||(32473395-32473452)
chr5 (212-278)||(32473308-32473374)
chr5 (209-278)||(17208194-17208263)
chr5 (212-278)||(30622633-30622699)
chr5 (358-386)||(7617133-7617161)
chr5 (299-351)||(30622720-30622772)
chr5 (358-386)||(41334735-41334763)
[»] scaffold0187 (2 HSPs)
scaffold0187 (208-386)||(14099-14288)
scaffold0187 (208-386)||(24427-24616)
[»] scaffold0119 (1 HSPs)
scaffold0119 (212-386)||(685-871)
[»] scaffold0385 (1 HSPs)
scaffold0385 (208-356)||(11293-11441)
[»] scaffold0157 (1 HSPs)
scaffold0157 (211-386)||(23334-23521)
[»] scaffold0003 (2 HSPs)
scaffold0003 (299-348)||(45720-45769)
scaffold0003 (227-278)||(45648-45699)
[»] scaffold0100 (1 HSPs)
scaffold0100 (299-356)||(35457-35514)


Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 396 - 647
Target Start/End: Original strand, 43901753 - 43902002
Alignment:
Q  396 ggagaaccgacttgcatgtgatcttgccacacaagcaaacaaccgtacatgtcatatcacaccactaagtgcgtgtgtttggatcaggtttgcaaatatc 495  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  43901753 ggagaactgacttgcatgtgatcttgccacacaagcaaacaaccgtacatgtcatatcacaccactaagtgcgtgt--ttggatcaggttcgcaaatatc 43901850  T
Q  496 acgtcccaagtcaagttggatgtggaaatcctgaagctacaaaacaagcttttgtgaaaacgtgaaaatccaccgtaatttgcttgaaacaactgctaaa 595  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43901851 acgtcccaagtcaagttggatgtggaaatcctgaagctacaaagcaagcttttgtgaaaacgtgaaaatccaccgtaatttgcttgaaacaaccgctaaa 43901950  T
Q  596 ccaaacaagtactaatcttttagttaacacaaagactatattcttcgacatc 647  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  43901951 ccaaacaagtactaatcttttagttaacacgaagactatattgttcgacatc 43902002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 43901549 - 43901744
Alignment:
Q  1 ataccctgatactttggcataaggccactgtccattagaggacttacactagtttgaccactcgtggaggaacaacaccaactccactacatacgaacgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  43901549 ataccctgatactttggcataaggccactgtccattagaggacttacactagtttgaccactcgtggaggaacaacaccaactccaccacatatgaacgc 43901648  T
Q  101 tccataccatacctatgagaaaaccaacactgcttatttaggaggaaaaagcaaagagcaattgaattgaagtgggggaaatcaaagagaaactag 196  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43901649 tccataccatacctatgagaaaaccaacactgcttacttaggaggaaaaagcaaagagcaattgaattgaagtgggggaaatcaaagagaaactag 43901744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 28982732 - 28982922
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28982732 gtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 28982831  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatg------------gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    || ||||||||||||||||||||||||||||| ||||| |||            |||||||| ||||||||||||||||||||||||||||    
T  28982832 tgcggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcc 28982922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 35017922 - 35017733
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35017922 gtgatgatacatgtaccaccccatgtggcaatacatcttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 35017823  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtg------------taggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||            ||||||||||||||||||||||||||||||||    
T  35017822 tgtggttgtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 33703331 - 33703183
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  33703331 gtgatgatacatgtaccaccccatatggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccgcacaaatagaagataaag 33703232  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33703231 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgta 33703183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 27864750 - 27864606
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||| |||||||| ||||||||||    
T  27864750 tgatacatgtaccaccccatgtggcaatacaccctttacatccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagtgtg 27864651  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  27864650 gttgtgagatgaacttaccaaaatatccctaatacatggggtgta 27864606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 27893756 - 27893900
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  27893756 tgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtg 27893855  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  27893856 gttgtgagatgaaattaccaaaatatccctaatacatggggtgta 27893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 1771176 - 1771366
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||     
T  1771176 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgagacgtggcaacttggaccccacataaatagaagataaaa 1771275  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||| |||||||||  ||||||            ||||||||||||||||||||||||||||||||||||||||    
T  1771276 tgtggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 25051883 - 25051735
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||| ||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25051883 gtgatgatacatgtaccaccccacgtggcaatacatcatttacatccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaag 25051784  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  25051783 tgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgta 25051735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 27550499 - 27550351
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  27550499 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacataaatagaagataaag 27550400  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  27550399 tgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgta 27550351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 43514596 - 43514784
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||| |    
T  43514596 gtgatgatacatgtaccaccccatgtggcaatacactctttacatccacaaaaaattctgacacgtggcaacctagaccccacacaaatagaagataagg 43514695  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    ||||||||||||||||||||||||||||| || ||||||            |||| |||||||||||||||||||||||||||||||||    
T  43514696 tgtggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 208 - 350
Target Start/End: Complemental strand, 43735932 - 43735790
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  43735932 gtgatgatacatgtaccaccccacgtggcaatacaccctttacatccacataaaattctgacacgtgacaacttggatcccacacaaatagaagataaag 43735833  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgg 350  Q
    |||| |||||||||||||||| |||||||||  ||||||||||    
T  43735832 tgtgattgtgagatgaacttatcaaaatatctctaatacatgg 43735790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 51512175 - 51512339
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||| ||||||||||| | || | | ||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  51512175 gtgatgatacatgtaccaccccacgtggcaatacatctttaatacccacacaaaattctgacacgtggcaacctggaccccacacaaataaaagataaag 51512274  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttc 372  Q
    ||||||| | |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  51512275 tgtggttataagatgaacttaccaaaatatctctaatacatggggtgtaggaataaagggtgttc 51512339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 55966260 - 55966404
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| |||||||||||||| ||||    
T  55966260 tgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctgacaggtggcaatctagaccccacataaatagaagataaattgtg 55966359  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||    
T  55966360 gttgtgagatgaacttaccaaaatatccctaatacatgggatgta 55966404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 27316622 - 27316771
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaa-ttctgacacgtggcaatttggaccccacacaaatagaagataaa 306  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||| ||| | ||||||||||||||    
T  27316622 gtgatgatacatttatcatcccatgtgacaatacaccctttacatccacacaaaaattctgacacgtggcaacttggactccaaataaatagaagataaa 27316721  T
Q  307 gtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27316722 gtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgta 27316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 23036170 - 23036022
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  23036170 gtgatgatacatgtaccaccccatgtggcaacacatcctttacacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaag 23036071  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||| ||||||||| ||||| || |||||||    
T  23036070 tgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgta 23036022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 31681088 - 31680944
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||    
T  31681088 tgatacatgtagcatcccatgtggcaatacaccctttacacctacataaaattctgacacgtggcaatctaaaccccacataaatagaagataaagtgtg 31680989  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||    
T  31680988 gttgtgagatgaacttaccaaaatatccctaatatacggggtgta 31680944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 43949711 - 43949859
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| || ||||||||||||||||| | ||| | |||||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  43949711 gtgatgatacatgtaccaccctatttggcaatacaccctttatacccatacaaaattctgacacgtggcatattggatcccgcacaaatagaagataaag 43949810  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43949811 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgta 43949859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 39631275 - 39631143
Alignment:
Q  224 caccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatga 323  Q
    ||||||||||| ||||||| |||||||| ||||| |||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  39631275 caccccatgtgacaatacatcctttacacccacacaaaattctgacacgtgacatattgaaccccacacaaatagaagataaagtgtggttgtgagatga 39631176  T
Q  324 acttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||| ||||||||| ||||||    
T  39631175 acttaccaaaatatccctaatacatgaggtgta 39631143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 48463364 - 48463508
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||| |||| ||| || |||||||| |||||||| ||||||| ||    
T  48463364 tgatacatgtaccactctatgtggcaatacaccctttacacccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagtatg 48463463  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||    
T  48463464 gttgtgagatgaacttaccaaaatatccctaatacatgggatgta 48463508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 23204688 - 23204828
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||| ||| || |||||||||||||| | |||||||| |||||||||||||||||| |||||||  ||||||||||| |||||||||||||||    
T  23204688 gtgatgatacacgtaccatcccatgtggcaatatatcctttacacccacataaaattctgacatgtggcaacctggaccccacataaatagaagataaag 23204787  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    ||||||||||| |||||||||| ||||||||| ||||||||    
T  23204788 tgtggttgtgacatgaacttacaaaaatatccctaatacat 23204828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 211 - 386
Target Start/End: Complemental strand, 12497143 - 12496956
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||| | ||||||||||| ||||||||  |||||| ||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||||    
T  12497143 atgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgt 12497044  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggg------------gtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    | |||| |||||||||||||||||||||  |||||||||||            ||||||||||||||||||||||| |||||||||||    
T  12497043 gattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 246 - 384
Target Start/End: Original strand, 46412417 - 46412557
Alignment:
Q  246 tttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccataata 345  Q
    |||||||| ||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||||||||  |||||    
T  46412417 tttacatctacacaaaattctgacacgtggcaatttaaaccccacataaatagaagataaagtgtggttgtgagaagaacttaccaaaatatctctaata 46412516  T
Q  346 --catggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
       |||  ||||||||||||| |||||||| ||||||||||    
T  46412517 ataatgaagtgtaggaataaaaggtgttcacgtaacatttt 46412557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 41848157 - 41848013
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    |||||||||||   |||||||||||||||||||| ||||||||||  |||||||||||| ||| |||| || ||||||||||||||||||| ||||||||    
T  41848157 tgatacatgtacacccccatgtggcaatacaccccttacatccacgcaaaattctgacatgtgacaatctgaaccccacacaaatagaagagaaagtgtg 41848058  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||| |||||| || ||||||| ||  |||| |||||||||||    
T  41848057 gttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgta 41848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 45490227 - 45490371
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    |||||||||||  |||| ||||||||||| | | |||||| ||||| || |||||||||||||||||  |||| |||  |||||||||||||||||||||    
T  45490227 tgatacatgtagtaccctatgtggcaatatatcatttacacccacacaagattctgacacgtggcaacctggatcccgtacaaatagaagataaagtgtg 45490326  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||| |||| ||| ||||| ||||||||| ||||||    
T  45490327 gttgtgagatgaatttactaaagtatccctaatacatgaggtgta 45490371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 208 - 337
Target Start/End: Complemental strand, 21687196 - 21687067
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| || || |||||||||||||  |||||||| |||| ||||||||||||||||||||  || || ||| |||||||||||||||||    
T  21687196 gtgatgatatatgtaccaacctatgtggcaatacattctttacattcacacaaaattctgacacgtggcaacctgaactccagacaaatagaagataaag 21687097  T
Q  308 tgtggttgtgagatgaacttaccaaaatat 337  Q
    | ||||| |||||||||||||| |||||||    
T  21687096 tatggttatgagatgaacttactaaaatat 21687067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 41878567 - 41878460
Alignment:
Q  237 aatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaata 336  Q
    ||||||| ||||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||| || || ||||||||||||||||||| |||||||    
T  41878567 aatacactctttacaccaacacaaaattctgacacgtgacaatctggaccccacacaaatagaagagaaggtttggttgtgagatgaacttatcaaaata 41878468  T
Q  337 tccataat 344  Q
    ||| ||||    
T  41878467 tccctaat 41878460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 41327478 - 41327580
Alignment:
Q  233 tggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaa 332  Q
    ||||||||||||| |||||  |||| |||||||| ||| |||||||  |||||||||||||||| ||||| ||||||||| ||||||||||| |||||||    
T  41327478 tggcaatacaccccttacactcacaaaaaattctaacatgtggcaacctggaccccacacaaattgaagagaaagtgtggatgtgagatgaatttaccaa 41327577  T
Q  333 aat 335  Q
    |||    
T  41327578 aat 41327580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 28988658 - 28988515
Alignment:
Q  212 tgatacatgtatcaccc-catgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    ||||||||||| ||||| |||||| |||||||||| |||| || | | ||||||||||||  ||||||  |||||||||||||||||||||| |||||||    
T  28988658 tgatacatgta-caccctcatgtgacaatacaccccttacctc-atacaaaattctgacatatggcaacctggaccccacacaaatagaagagaaagtgt 28988561  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||||||| ||| |||||| ||| || | |||||||||||    
T  28988560 ggttatgagatgaatttatcaaaatgtccctagtgcatggggtgta 28988515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 371
Target Start/End: Original strand, 56215812 - 56215970
Alignment:
Q  212 tgatacatgtatcacc-ccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    ||||||||||| |||| ||||||||| |||||||  ||||| ||||| ||||||||||||  | ||||  | ||||||||||||||||| || |||||||    
T  56215812 tgatacatgta-caccaccatgtggccatacacctcttacacccacacaaaattctgacatatagcaacctagaccccacacaaataga-gagaaagtgt 56215909  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgtt 371  Q
    ||||||||||| || || ||||||||||  |||| ||| || |||| ||||||||| ||||    
T  56215910 ggttgtgagataaattttccaaaatatcgctaatgcataggatgtatgaataaaggatgtt 56215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 36004117 - 36004204
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||| ||||| |||||||||||| || ||| |||||| ||| ||||| |||||||||| || |||||||| |||||||||||||||||    
T  36004117 aagagaaagtatggttgtgagataaatttatcaaaatgtccctaatatatggggtgtatgattaaagggtattcatgtaacattttcc 36004204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 571
Target Start/End: Complemental strand, 51305364 - 51305282
Alignment:
Q  489 aaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaacaagcttttgtgaaaacgtgaaaatccaccgt 571  Q
    |||||||||||||| || ||||||||||||| |||| || || ||| |||||||| |||||||||||| ||||||| ||||||    
T  51305364 aaatatcacgtcccgaggcaagttggatgtgaaaattctcaaactaaaaaacaagtttttgtgaaaacatgaaaattcaccgt 51305282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 601
Target Start/End: Original strand, 34113300 - 34113417
Alignment:
Q  485 ttgcaaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaac-aagcttttgtgaaaacgtgaaaatccaccgtaatttgcttgaa 583  Q
    |||| ||||||||||||| ||  ||  ||||||| |||||| ||||| |||||||  || |||||||||||||||||||||||||||| |||  || |||    
T  34113300 ttgcgaatatcacgtcccgagataaactggatgtagaaatcttgaaggtacaaaagtaaacttttgtgaaaacgtgaaaatccaccgtgattctctagaa 34113399  T
Q  584 acaactgctaaaccaaac 601  Q
    || | |||||||||||||    
T  34113400 accattgctaaaccaaac 34113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 575
Target Start/End: Original strand, 47492020 - 47492109
Alignment:
Q  487 gcaaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaac-aagcttttgtgaaaacgtgaaaatccaccgtaatt 575  Q
    ||||||||||||||   || |||| ||||  |||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||    
T  47492020 gcaaatatcacgtctagaggcaagctggacatggaaatcctgaagttacaaaagtaagattttgtgaaaacgtgaaaatccaccgtaatt 47492109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 17619153 - 17619210
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  17619153 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgta 17619210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 55272377 - 55272434
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  55272377 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgta 55272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 35037093 - 35037047
Alignment:
Q  310 tggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  35037093 tggttgtgagatgaatttaccaaaatatccttaatgcatggggtgta 35037047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 19880053 - 19879996
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| || |||||||||||| |||||||||| ||||||||| ||||||||||    
T  19880053 aagagaaagtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgta 19879996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 25051732 - 25051693
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  25051732 atggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 19880140 - 19880074
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  19880140 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 19880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 35037190 - 35037125
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||| ||| |||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  35037190 tgatacatgta-cactccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 55272290 - 55272356
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  55272290 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 55272356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 712059 - 712002
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| || |||||||||||| |||||||||||||| |||| ||| |||||||    
T  712059 aagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgta 712002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 38851612 - 38851555
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| ||| |||||| |||||||| ||||| |||||    
T  38851612 aagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgta 38851555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 48435580 - 48435637
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||| || |||||||||||| ||||||| || ||| |||| |||||||||||    
T  48435580 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgta 48435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 711996 - 711960
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  711996 gggtgtatgattaaagggtgttcatgtaacattttcc 711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 23204839 - 23204875
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattt 383  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  23204839 atgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 386
Target Start/End: Complemental strand, 28988501 - 28988473
Alignment:
Q  358 gaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||    
T  28988501 gaataaagggtgttcatgtaacattttcc 28988473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 42849769 - 42849946
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  42849769 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa-ataaag 42849867  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42849868 tgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 19047347 - 19047199
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  19047347 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaag 19047248  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  19047247 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 19047199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 30838822 - 30838674
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| | ||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  30838822 gtgatgatacatgtaccaccccatgtggcaatacaccttttacacctacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 30838723  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30838722 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgta 30838674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 4764636 - 4764784
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  4764636 gtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 4764735  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  4764736 tgtggttgtgagatgaatttaccaaaatatttataatacatggggtgta 4764784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 1750604 - 1750414
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||  |||| ||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1750604 gtgatgatatttgtaccaccccatgtggcaacacaccctttacactcacacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaag 1750505  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||||            ||||||||||||||||||||||||||||||||||||||||    
T  1750504 tgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 210 - 386
Target Start/End: Original strand, 12302165 - 12302353
Alignment:
Q  210 gatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtg 309  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||  ||||||||||| |||||||||||||||||    
T  12302165 gatgatacatgtatcaccccatgtggcaatacatcctttacatccacacaaaattctgacacatggtaacctggaccccacataaatagaagataaagtg 12302264  T
Q  310 tggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||| ||||||||| ||||||            ||||||||||| ||||||||||||||||||||||||||||    
T  12302265 tggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 43335673 - 43335821
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||  |||| |||||| |||||||||||||||    
T  43335673 gtgatgatacatgtaccaccccatgtggcaatataccttttacatccacacaaaattctgacacgtggcaacctggatcccacataaatagaagataaag 43335772  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||| |||||||||||||||||||||||||||| ||||||||||| ||||    
T  43335773 tgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgta 43335821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 43490311 - 43490499
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||| |||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  43490311 gtgatgctacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacataaatagaagataaag 43490410  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    ||||||| |||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||    
T  43490411 tgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 16096938 - 16096747
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttgga-ccccacacaaatagaagataaa 306  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||||||||| || || ||||||| || |||||||||||    
T  16096938 gtgatgatacatgtaccacatcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttagacccccacataagtagaagataaa 16096839  T
Q  307 gtgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||| |||| |||||||||||| ||||||            ||||||||||||||||||||||||||||||||||||||||    
T  16096838 gtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 39149204 - 39149342
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| |||||| |||||||| |||||| ||||| |||||| ||| |||||| ||||| ||||| ||||||||| |||||||||    
T  39149204 gtgatgatacatgtaccaccc-atgtggtaatacaccttttacacccacacaaaattatgagacgtggtaatttagaccc-acacaaataaaagataaag 39149301  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    ||| |||||| ||||||||||||||||||||  ||||||||    
T  39149302 tgtagttgtgggatgaacttaccaaaatatctctaatacat 39149342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 356
Target Start/End: Original strand, 13780676 - 13780793
Alignment:
Q  239 tacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatc 338  Q
    ||||||||||||| | | | |||||||||||| |||||||  ||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||    
T  13780676 tacaccctttacacctatacaaaattctgacatgtggcaacctggaccccacataaatagaagagaaagtgtggttgtgagatgaatttatcaaaatatc 13780775  T
Q  339 cataatacatggggtgta 356  Q
    | ||||  ||||||||||    
T  13780776 cctaatgtatggggtgta 13780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 34817686 - 34817834
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||||||||   |||||||||||||| | ||| ||||| ||| | |||||||||||| |||||||  |||| |||  |||||||||||| ||||    
T  34817686 gtgatgatacatgtacacccccatgtggcaatgctccccttacacccatacaaaattctgacatgtggcaacctggatcccgtacaaatagaagagaaag 34817785  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||| |||||||||| | | || | |||||||||||    
T  34817786 tgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgta 34817834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 211 - 344
Target Start/End: Complemental strand, 42026956 - 42026823
Alignment:
Q  211 atgatacatgtatcacc-ccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtg 309  Q
    |||||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||||||||  | ||||  | |||||||||||||||||| | ||||||    
T  42026956 atgatacatgta-cacctccatgtggcaatacaccccttacacccacacaaaattctgacatcttgcaacctagaccccacacaaatagaaaagaaagtg 42026858  T
Q  310 tggttgtgagatgaacttaccaaaatatccataat 344  Q
    | ||||||||||||| || ||||||||||| ||||    
T  42026857 tagttgtgagatgaatttgccaaaatatccctaat 42026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 8896544 - 8896622
Alignment:
Q  259 aaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatat 337  Q
    |||||||||||| |||||||  || ||| ||||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  8896544 aaaattctgacatgtggcaacctgaacctcacacaaatagaaaagaaagtgtgattgtgagatgaatttaccaaaatat 8896622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 33229396 - 33229344
Alignment:
Q  304 aaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||||||||||||    
T  33229396 aaagtgtgattgtatgatgaacttaccaaaatatccctaatacatggggtgta 33229344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 43114656 - 43114599
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  43114656 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 43114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 385
Target Start/End: Complemental strand, 19047190 - 19047158
Alignment:
Q  353 tgtaggaataaagggtgttcatgtaacattttc 385  Q
    |||||||||||||||||||||||||||||||||    
T  19047190 tgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 12415389 - 12415432
Alignment:
Q  227 cccatgtggcaatacaccctttacatccacataaaattctgaca 270  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||    
T  12415389 cccatgtggcaatacacctcttacatccacacaaaattctgaca 12415432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 12427449 - 12427492
Alignment:
Q  227 cccatgtggcaatacaccctttacatccacataaaattctgaca 270  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||    
T  12427449 cccatgtggcaatacacctcttacatccacacaaaattctgaca 12427492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 11825568 - 11825634
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  11825568 tgatacatgtacatccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 11825634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 34895655 - 34895721
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  34895655 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 34895721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 4451951 - 4451996
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataat 344  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||    
T  4451951 aagagaaagtatggttgtgagatgaatttaccaaaatatccctaat 4451996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 384
Target Start/End: Complemental strand, 7070455 - 7070418
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  7070455 atgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 11825655 - 11825712
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| || |||||||||||| |||||||||| ||| |||| |||||||||||    
T  11825655 aagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 11825712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 12415461 - 12415518
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| |||||||||||| || |||||||||| ||| |||| |||||||||||    
T  12415461 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgta 12415518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 12427521 - 12427578
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| |||||||||||| || |||||||||| ||| |||| |||||||||||    
T  12427521 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgta 12427578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 34895742 - 34895799
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||| || |||||||||||| ||||||| || ||| |||| |||||||||||    
T  34895742 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgta 34895799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 41281975 - 41282032
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| ||| |||||| ||| |||| |||||||||||    
T  41281975 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgta 41282032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 966898 - 966934
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  966898 gggtgtatgattaaagggtgttcatgtaacattttcc 966934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 4764790 - 4764826
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  4764790 gggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 16804004 - 16803968
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  16804004 gggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 16843286 - 16843250
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  16843286 gggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 18491741 - 18491705
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  18491741 gggtgtatgattaaagggtgttcatgtaacattttcc 18491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 19930894 - 19930830
Alignment:
Q  232 gtggcaatacacccttt-acatccacataaaattctgacacgtggcaatttggaccccacacaaa 295  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| |  || |||||||| ||||||    
T  19930894 gtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaa 19930830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 27864728 - 27864772
Alignment:
Q  230 atgtggcaatacacccttt-acatccacataaaattctgacacgt 273  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  27864728 atgtggcaatacaccctttgacatccacacaaaaatctgacacgt 27864772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 43114593 - 43114557
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  43114593 gggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 5e-67; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 46941243 - 46941053
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46941243 gtgatgatacatgtaccaccccatgtggcaatacactctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 46941144  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgggg------------tgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||||||||            ||||||||||||||||||||||||||||||||||    
T  46941143 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 52630018 - 52629840
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||||||| ||| |||||||||||||||    
T  52630018 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtagcaacctggaccctacataaatagaagataaag 52629919  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  52629918 tgtggttgtgagatgaacttacaaaaatatccttaatacatagggtgtaggaataaaaggtgttcatgtaatattttcc 52629840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 40809055 - 40808907
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  40809055 gtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 40808956  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40808955 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgta 40808907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 385
Target Start/End: Original strand, 42394329 - 42394518
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  42394329 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaag 42394428  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta------------ggaataaagggtgttcatgtaacattttc 385  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||            |||||||||||||||||||||||||||||    
T  42394429 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 54237286 - 54237138
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | || |||||||||||||||||| |||||||||||||||||||||||||||    
T  54237286 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaatattctgacacgtggcaatctggaccccacacaaatagaagataaag 54237187  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  54237186 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 54237138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 36150316 - 36150172
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  36150316 tgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtg 36150217  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| | |||||| |||||||    
T  36150216 gttgtgagatgaacttaccaaaatatccctgatacatagggtgta 36150172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 40480939 - 40480799
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  40480939 gtgatgatacatgtatcaccccatgcggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccctacacaaatagaagataaag 40480840  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  40480839 tgtggttgtgagatgaacttaccaaaatatccctaatacat 40480799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 54246058 - 54246248
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  54246058 gtgatgatacatgtaccaccccatgtggcaatacattctttacacccacataaaattctgacatgtggcaacctggaccccacacaaatagaagataaag 54246157  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||  ||||||            ||||||||||||||||||||||||||||||||||||||||    
T  54246158 tgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 24688312 - 24688460
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  24688312 gtgatgatacatgtaccaccccatgtggcaatacaccatttacccccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaag 24688411  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  24688412 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 24688460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 47190936 - 47191125
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| ||||| |||||||||||| |||| || ||||||||||||||||||||||||||||    
T  47190936 gtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacatgtggtaacttggaccccacacaaatagaagataaag 47191035  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgg-----------ggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||| |||||||||  ||||||||||           ||||||||||||||||||||||||||||||||||||    
T  47191036 tgtggttgtgagatgaacttatcaaaatatctctaatacatgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 25413871 - 25413681
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||| || |||||||||||||||| ||||| |||| |||||||||||| ||  |||||||||||||||||||||||||||    
T  25413871 gtgatgatacatgtaccaccccatatgacaatacaccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaatagaagataaag 25413772  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||||            ||||||||||||||||||||||||||||||||||||||||    
T  25413771 tgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 45126842 - 45126986
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||| ||||||||||| |||||||| ||||||||||    
T  45126842 tgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctggcatgtggtaatctggaccccacataaatagaaaataaagtgtg 45126941  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  45126942 gttgtgagatgaacttaccaaaatatccctaatacatggggtgta 45126986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 53581768 - 53581908
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||| |||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  53581768 gtgatgatacctgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 53581867  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  53581868 tgtggttgtgagatgaacttatcaaaatatccctaatacat 53581908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 42100878 - 42100688
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||| ||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||  || || ||||||||||| ||||||||     
T  42100878 gtgatcatacatgtaccacctcatgtggcaatgcaccctttacacccacataaaattctgacacgtggcaacctgaactccacacaaataaaagataaaa 42100779  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgggg------------tgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||||||||            ||||||||||||||||||||||||||||||||||    
T  42100778 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 1078408 - 1078312
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagata 304  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||  || || ||||||||||||||||||    
T  1078408 gtgatgatacatgtaccacctcatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgaactccacacaaatagaagata 1078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 348
Target Start/End: Complemental strand, 27748740 - 27748613
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||          ||| |||||||||||| |||||||  |||||||||||||||||||||||||||| |     
T  27748740 tgatacatgtaccaccccatgtggcaatacaccg---------acacaaaattctgacatgtggcaacctggaccccacacaaatagaagataaagtatt 27748650  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacat 348  Q
    |||||||||||||||||||||||||||| ||||||||    
T  27748649 gttgtgagatgaacttaccaaaatatccctaatacat 27748613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 51249494 - 51249350
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||||  || ||| ||  ||||||| | |||||| || | |||||||||||| |||||||| |||| ||||||||||||||||| ||||||||    
T  51249494 tgatacatgtatatcctcatatgataatacactccttacattcatacaaaattctgacatgtggcaatctggatcccacacaaatagaagagaaagtgtg 51249395  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||| |||||||||||||| |||| |||| ||||||    
T  51249394 gttgtgagatgaatttaccaaaatatccttaatgcatgaggtgta 51249350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 53273603 - 53273742
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| || ||||||||||||||||||          ||| |||||||||| |||||| ||  |||| |||||| ||||| |||||||||    
T  53273603 gtgatgatacatgtaccatcccatgtggcaatacacct---------acacaaaattctgatacgtggtaacctggatcccacataaataaaagataaag 53273693  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    | |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  53273694 tatggttgtgagatgaacttaccaaaatatccctaatacatgggatgta 53273742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 11064655 - 11064762
Alignment:
Q  231 tgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 330  Q
    |||| |||||||||| ||||| ||||| |||||| ||||| |||| ||| | ||||||||||||||||||||  ||||||| || ||||||||| | | |    
T  11064655 tgtgacaatacaccccttacacccacacaaaattttgacatgtggtaatctagaccccacacaaatagaagagtaagtgtgattatgagatgaattaatc 11064754  T
Q  331 aaaatatc 338  Q
    ||||||||    
T  11064755 aaaatatc 11064762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 10457806 - 10457872
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||  || ||||||||||||||||  ||||||||||| ||||| |||||| |||||||    
T  10457806 tgatacatgtataccctcatgtggcaatacacctcttacatccacacaaaatcctgacatgtggcaa 10457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 9434223 - 9434166
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  9434223 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 9434166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 10457893 - 10457950
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| |||||||||||| || |||||||||||||| |||| |||||||||||    
T  10457893 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgta 10457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 29556873 - 29556956
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaat 296  Q
    ||||||||||| |||  |||||||||||||||  |||||| ||| |||||| ||||||| |||||||  || |||||||||||||    
T  29556873 tgatacatgtaccactacatgtggcaatacacaatttacacccatataaaa-tctgacatgtggcaacctgaaccccacacaaat 29556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 385
Target Start/End: Complemental strand, 54237129 - 54237097
Alignment:
Q  353 tgtaggaataaagggtgttcatgtaacattttc 385  Q
    |||||||||||||||||||||||||||||||||    
T  54237129 tgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 9434295 - 9434244
Alignment:
Q  227 cccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||||||||  ||||| ||||| |||||||||||| |||||||    
T  9434295 cccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 9434244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 36150169 - 36150130
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  36150169 atggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 25996356 - 25996310
Alignment:
Q  310 tggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||| |||||||||| ||| ||||| ||||||||||    
T  25996356 tggttgtgagatgaatttaccaaaatgtccttaatatatggggtgta 25996310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 45058626 - 45058564
Alignment:
Q  232 gtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaa 294  Q
    |||||||||||||||| ||| |||||||||| ||||||| ||| | || |||||||| |||||    
T  45058626 gtggcaatacacccttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaa 45058564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 4190266 - 4190315
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    |||| ||||| ||||||||||||||| |||||||||||||  ||||||||    
T  4190266 aagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacat 4190315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 51757692 - 51757635
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||| ||||| |||||||| |||| ||||||    
T  51757692 aagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgta 51757635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 4190329 - 4190365
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  4190329 gggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 19148940 - 19148896
Alignment:
Q  226 ccccatgtggcaatacaccctttacatccacataaaattctgaca 270  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||    
T  19148940 ccccatgtggcaatacaccacttacacccacacaaaattctgaca 19148896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 5e-67; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 5489966 - 5489776
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5489966 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 5489867  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  5489866 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 43570996 - 43571186
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43570996 gtgatgatatatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 43571095  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgg------------ggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||||||            ||||||||||||||||||||||||||||||||||||    
T  43571096 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 48498872 - 48499020
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48498872 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 48498971  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  48498972 tgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgta 48499020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 4888232 - 4888055
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| ||||||||||| | |||||||||||||| |||||||||| || ||||||||||||| |||||||||||||| ||||||    
T  4888232 gtgatgatacatgtaccaccc-atgtggcaatatatcctttacatccacacaaaattctgatacatggcaatttggacaccacacaaatagaaaataaag 4888134  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  4888133 tgtggttgtgagataaacttaccaaaatatccctaatacatgggatgtaggaataaagggcgttcatgtaacattttcc 4888055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 24769409 - 24769557
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24769409 gtgatgatacatgtaccaccccatgtggcaatacactctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 24769508  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  24769509 tgtggttgtgataagaacttaccaaaatatccctaatacatggggtgta 24769557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 4401518 - 4401370
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4401518 gtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcatattggaccccacacaaatagaagataaag 4401419  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  4401418 tgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgta 4401370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 37814964 - 37814820
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  37814964 tgatacatgtaccaccccatgtggcaatacaccctttacatccatataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtgtg 37814865  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||    
T  37814864 gttgtgaaatgaatttaccaaaatatccttaatacatggggtgta 37814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 7448015 - 7447872
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7448015 gtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 7447916  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggg 351  Q
    ||||||||||||||||||||| |||||||||  |||||||||||    
T  7447915 tgtggttgtgagatgaacttatcaaaatatctgtaatacatggg 7447872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 750215 - 750363
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  750215 gtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggtaacatggaccccacacaaatagaagataaag 750314  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||||||    
T  750315 tgtggttttgagatgaatttatcaaaatatccctgatacatggggtgta 750363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 2497476 - 2497620
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||||||| |||| |||| |||||| ||||||| |||||||||||    
T  2497476 tgatacatgtaccacaccatgtggcaatacaccctttatacccacataaaattctgacacgtgacaatctggatcccacataaatagatgataaagtgtg 2497575  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  2497576 gttgtgagatgaacttaccaaaatatccttaatatatggggtgta 2497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 50448170 - 50448310
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||||| ||||||||||||||     
T  50448170 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaacccacaaaaatagaagataaaa 50448269  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    ||||||||| |||||||||||| ||||||||| ||||||||    
T  50448270 tgtggttgtaagatgaacttacaaaaatatccctaatacat 50448310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 212 - 353
Target Start/End: Original strand, 23989437 - 23989578
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||| || ||||||||||||||||||| ||||| || ||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  23989437 tgatacatgtaccaccctatatggcaatacaccctttacacccacacaagattctgacatgtggcaacctggaccccacacaaatagaagataaagtgtg 23989536  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggt 353  Q
    |||||||||| || |||||||||||||| |||||||| ||||    
T  23989537 gttgtgagataaatttaccaaaatatccctaatacatagggt 23989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 610
Target Start/End: Original strand, 15504229 - 15504354
Alignment:
Q  486 tgcaaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaac-aagcttttgtgaaaacgtgaaaatccaccgtaatttgcttgaaa 584  Q
    ||||||||||||||  | ||  ||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| || | ||    
T  15504229 tgcaaatatcacgtttcgaggtaagctggacgtggaaatcctgaagctacaaaagtaagcttttgtgaaaacgtgaaaatccaccgtgattttctagtaa 15504328  T
Q  585 caactgctaaaccaaacaagtactaa 610  Q
    | || |||||||||||| || |||||    
T  15504329 ccaccgctaaaccaaacgagcactaa 15504354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 48119727 - 48119670
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||||||||||    
T  48119727 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgta 48119670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 610
Target Start/End: Complemental strand, 2260203 - 2260079
Alignment:
Q  487 gcaaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaa-caagcttttgtgaaaacgtgaaaatccaccgtaatttgcttgaaac 585  Q
    ||||| ||||||| || ||  |||||||| ||| ||||| ||||||||||||| ||| ||||| ||||||| | ||||||||||||||||  || |||||    
T  2260203 gcaaagatcacgttccgaggtaagttggacgtgaaaatcttgaagctacaaaaacaaacttttatgaaaacataaaaatccaccgtaattctctagaaac 2260104  T
Q  586 aactgctaaaccaaacaagtactaa 610  Q
     || | |||||||||| || |||||    
T  2260103 caccgataaaccaaaccagcactaa 2260079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 35003393 - 35003336
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||  ||||||||||    
T  35003393 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgta 35003336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 38336017 - 38335960
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||||| ||||    
T  38336017 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgta 38335960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 44112776 - 44112719
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  44112776 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 44112719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 46168482 - 46168425
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| |||||||    
T  46168482 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgta 46168425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 564
Target Start/End: Original strand, 17302328 - 17302407
Alignment:
Q  486 tgcaaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaa-caagcttttgtgaaaacgtgaaaat 564  Q
    |||||||||||| ||||  | |||| | || |||||||| || ||||||||||| |||||||||||| ||||||||||||    
T  17302328 tgcaaatatcacatcccggggcaagcttgacgtggaaattctaaagctacaaaagcaagcttttgtgtaaacgtgaaaat 17302407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 41065252 - 41065195
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| ||||||||||  || |||| |||||||||||    
T  41065252 aagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgta 41065195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 44112846 - 44112797
Alignment:
Q  229 catgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||||||  ||||| ||||| |||||||||||| |||||||    
T  44112846 catgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 44112797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 45427746 - 45427803
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| ||||| |||||    
T  45427746 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgta 45427803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 45639733 - 45639790
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| || |||||||||||| |||||||||||||| ||||  ||||||||||    
T  45639733 aagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgta 45639790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 45705924 - 45705867
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| ||| |||||| |||||||| ||||| |||||    
T  45705924 aagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgta 45705867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 14427383 - 14427347
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  14427383 gggtgtatgattaaagggtgttcatgtaacattttcc 14427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 35003330 - 35003294
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  35003330 gggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 35003466 - 35003414
Alignment:
Q  226 ccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  35003466 ccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 41065189 - 41065153
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  41065189 gggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 41065323 - 41065271
Alignment:
Q  226 ccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||||||||||  |||||||| || ||||| |||||| |||||||    
T  41065323 ccccatgtggcaatacacctcttacatccgcacaaaatcctgacatgtggcaa 41065271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 44112713 - 44112677
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  44112713 gggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 7e-63; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 9241742 - 9241564
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  9241742 gtgatgatacatgtaccaccccatgtggcaacacaccctttgcacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaag 9241643  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||| || |||||||||||||||||  ||||||||||||||||||    
T  9241642 tgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtaggaataaaggaggttcatgtaacattttcc 9241564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 42197345 - 42197535
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  42197345 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaag 42197444  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||            |||||||||||||||||| |||||||||||||||||||||    
T  42197445 tgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 30660652 - 30660800
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  30660652 gtgatgatacatgtatcatcctatgtggcaatacaccctttacatccacataaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 30660751  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  30660752 tgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgta 30660800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 29705549 - 29705404
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29705549 atgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccgcacaaatagaagataaagtgt 29705450  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  29705449 ggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 29705404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 36743393 - 36743583
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36743393 gtgatgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaag 36743492  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  36743493 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 29800864 - 29801008
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  29800864 tgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtg 29800963  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  29800964 gttgtgagatgaacttaccaaaatatccctaatacatggggtgta 29801008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 31384854 - 31384706
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  31384854 gtgatgatatatgtaccaccccatgtggcaatataccctttacatccacataaaattctgacacgtagcaacctggaccccacacaaatagaagataaag 31384755  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  31384754 tgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgta 31384706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 211 - 386
Target Start/End: Complemental strand, 11582953 - 11582766
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11582953 atgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgt 11582854  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  11582853 ggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 2547186 - 2547038
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2547186 gtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataaag 2547087  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  2547086 tgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgta 2547038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 20148946 - 20148802
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||    
T  20148946 tgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgataaagtgtg 20148847  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  20148846 gttgtgagatgaacttaccaaaatatccctaatatatgaggtgta 20148802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 26125820 - 26125677
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  26125820 tgatatatgtaccaccccatgtggcaatacaccctttacacccgcataaaattctgacacgtggcaatctggaccc-acataaatagaagataaagtgtg 26125722  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  26125721 gttgtgagatgaacttaccaaaatatccctaatacatagggtgta 26125677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 208 - 384
Target Start/End: Original strand, 30912472 - 30912660
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||  | ||||||||||||||||||||||| |    
T  30912472 gtgatgatacatgtaccaccccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacctagaccccacacaaatagaagataagg 30912571  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    || |||||||||||||||||||||||||| || ||||||            ||||||||||||||||||||||||||||||||||||||    
T  30912572 tgcggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 208 - 357
Target Start/End: Complemental strand, 45397505 - 45397357
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||     
T  45397505 gtgatgatacatgtaccaccc-atgtggcaacacaccctttacacccacacaaaattctgacacgtggcaatctggagcccacacaaatagaagataaat 45397407  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtag 357  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  45397406 tgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtag 45397357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 3743961 - 3743813
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |||| ||| |||||||||||||||    
T  3743961 gtgatgatatatgtaccaccccatgtagcaatacaccctttacacccacataaaattctgacacgtggcaatctgaaccctacataaatagaagataaag 3743862  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  3743861 tgtggttgtgagatgaacttatcaaaatatacttaatatatggggtgta 3743813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 210 - 353
Target Start/End: Original strand, 2165875 - 2166018
Alignment:
Q  210 gatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtg 309  Q
    ||||||||||||| || |||||||| |||||||||||||||| ||||| ||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  2165875 gatgatacatgtaccatcccatgtgacaatacaccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaatagaagataaagtg 2165974  T
Q  310 tggttgtgagatgaacttaccaaaatatccataatacatggggt 353  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  2165975 tggttatgagatgaacttaccaaaatatctctaatacatggggt 2166018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 208 - 384
Target Start/End: Complemental strand, 42295384 - 42295197
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  42295384 gtgatgataaatgtaccatcctatgtggcaatataccctttacatccacacaaaattctgacatgtggcaacttggaccc-acataaatagaagataaag 42295286  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgg------------ggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    |||||||||||||||||||||||||||||||| ||||||||||            ||||||||||||||||||||||||||||||||||    
T  42295285 tgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 5755072 - 5754945
Alignment:
Q  229 catgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaactta 328  Q
    |||| |||||||||||||||||| ||||| |||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  5755072 catggggcaatacaccctttacacccacacaaaattctaacacgtggcaacttggatcccacataaatagaagataaagtgtggttgtgagatgaactta 5754973  T
Q  329 ccaaaatatccataatacatggggtgta 356  Q
    ||||||||||| ||||| ||||| ||||    
T  5754972 ccaaaatatccctaatatatgggatgta 5754945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 1375728 - 1375584
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||| ||||| |||||||  ||||||| ||||| || ||||| |||||||||||| || || ||||||||||||||||||||||||     
T  1375728 tgatacatgtaccaccctatgtgacaatacattctttacacccacacaagattctaacacgtggcaatctgaactccacacaaatagaagataaagtgta 1375629  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||| || |||||||||||||| ||||| ||||||||||    
T  1375628 gttgtgagataaatttaccaaaatatccctaatatatggggtgta 1375584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 229 - 356
Target Start/End: Original strand, 40528565 - 40528692
Alignment:
Q  229 catgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaactta 328  Q
    |||||| ||||| | | |||||||||||| |||||| ||||| ||| ||| ||| ||||||||||||||||||| |||||||||||||||||| || |||    
T  40528565 catgtgacaatatatcatttacatccacacaaaattatgacatgtgacaacttgaaccccacacaaatagaagagaaagtgtggttgtgagataaattta 40528664  T
Q  329 ccaaaatatccataatacatggggtgta 356  Q
     |||||| ||| ||||| ||||||||||    
T  40528665 tcaaaatgtccctaatatatggggtgta 40528692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 10678153 - 10678240
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| ||||| |||||||||| || |||||||| |||||||||||||||||    
T  10678153 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtatgattaaagggtattcatgtaacattttcc 10678240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 42699353 - 42699259
Alignment:
Q  302 ataaagtgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    |||||||||||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||||||||||||||||||||||    
T  42699353 ataaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 386
Target Start/End: Complemental strand, 28977181 - 28977146
Alignment:
Q  351 ggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  28977181 ggtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 45397355 - 45397317
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattttc 385  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45397355 atggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 18066719 - 18066776
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||| ||||||||| ||||||||||| ||||    
T  18066719 aagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgta 18066776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 34304887 - 34304830
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  34304887 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 34304830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 35181615 - 35181558
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  35181615 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 35181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 2166024 - 2166063
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  2166024 atggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 30479548 - 30479493
Alignment:
Q  232 gtggcaatacacccttt-acatccacataaaattctgacacgtggcaatttggacc 286  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||| || ||||||    
T  30479548 gtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacc 30479493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 34304973 - 34304908
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||| | ||||| |||||| |||||||    
T  34304973 tgatacatgta-caccccatgtggcaatacacctcttacacccaaacaaaatcctgacatgtggcaa 34304908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 18066653 - 18066698
Alignment:
Q  233 tggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||  ||||| |||||||||||||||||| |||||||    
T  18066653 tggcaatacacctcttacacccacataaaattctgacatgtggcaa 18066698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Original strand, 19386634 - 19386670
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  19386634 gggtgtatgattaaagggtgttcatgtaacattttcc 19386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 35181552 - 35181516
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||| || ||||||||||||||||||||||||||    
T  35181552 gggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 112845 - 112697
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  112845 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaag 112746  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  112745 tgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 112697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 385
Target Start/End: Complemental strand, 112688 - 112656
Alignment:
Q  353 tgtaggaataaagggtgttcatgtaacattttc 385  Q
    |||||||||||||||||||||||||||||||||    
T  112688 tgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 3e-59; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 43343534 - 43343682
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43343534 gtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataaag 43343633  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  43343634 tgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 43343682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 44416844 - 44416992
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  44416844 gtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataaag 44416943  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  44416944 tgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 44416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 24000925 - 24001112
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24000925 atgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgt 24001024  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  24001025 ggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 42538344 - 42538531
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42538344 atgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgt 42538443  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  42538444 ggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 211 - 356
Target Start/End: Original strand, 32029730 - 32029875
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  32029730 atgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgt 32029829  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||    
T  32029830 ggttgttagatgaatttaccaaaatatccctaatacatggggtgta 32029875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 5015581 - 5015437
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||||||||||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5015581 tgatacatgtaccaccccatgtggcaatacaccttttacactcacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtg 5015482  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  5015481 gttgtgagatgaacttaccaaaatatccctaatacatgaggtgta 5015437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 16180267 - 16180415
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  16180267 gtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 16180366  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||||||||    
T  16180367 tgtggttgtgagatgaatttaccaaaatatttataatacgtggggtgta 16180415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 5810834 - 5811024
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  5810834 gtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacatgtggcaacttggaccccacacaaatagaagataaag 5810933  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataata------------catggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||| |||||||||| |||||             ||||||||||||||||||||||| ||||||||||||||||    
T  5810934 tgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 44326364 - 44326220
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||    
T  44326364 tgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatgataaagtgtg 44326265  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  44326264 gttgtgagatgaacttaccaaaatatccctaatatatgaggtgta 44326220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 42973039 - 42972894
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    ||||||||||||  | || ||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  42973039 atgatacatgtactatcctatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaaatgt 42972940  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  42972939 ggttgtgagatgaacttaccaaaatatccctaatacatgaggtgta 42972894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 35069911 - 35069763
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| || || ||||||||||| | |||||||||| ||| |||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  35069911 gtgatgatacatgtaccatcctatgtggcaatatatcctttacatctacacaaaattctgacacgtggcaacttggacctcacataaatagaagataaag 35069812  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  35069811 tgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgta 35069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 27393171 - 27393310
Alignment:
Q  209 tgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagt 308  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| | |||||  ||||||||||| ||||||||||||||||    
T  27393171 tgatgatacatgtaccaccccatgtggcaatacatcctttacacccacataaaattctgacatgaggcaacctggaccccacataaatagaagataaagt 27393270  T
Q  309 gtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  27393271 gtggttgtgagatgaacttacaaaaatatccctaatacat 27393310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 224 - 356
Target Start/End: Original strand, 38160505 - 38160637
Alignment:
Q  224 caccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatga 323  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  38160505 caccccatgtggcaatacaccccttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtagttgtgagatga 38160604  T
Q  324 acttaccaaaatatccataatacatggggtgta 356  Q
    | |||| ||||||||| ||||||||||||||||    
T  38160605 agttactaaaatatccctaatacatggggtgta 38160637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 45326206 - 45326062
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||| |||| | | ||||||||||| |||||||||||||||||||    
T  45326206 tgatacatgtaccaccccatgtgacaatacaccatttacacccacataaaattctgacaggtggtagtctggaccccacataaatagaagataaagtgtg 45326107  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
     ||||||||||||||||||||||||||| ||||| ||||||||||    
T  45326106 attgtgagatgaacttaccaaaatatccctaatatatggggtgta 45326062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 212 - 350
Target Start/End: Original strand, 26898316 - 26898454
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| || || ||||||||||||||| |||||| ||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||    
T  26898316 tgatacatgtaccatcctatgtggcaatacaccttttacacccacataaaattctgacacgtggtaacctggaccccacacaaatagaatataaagtgtg 26898415  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatgg 350  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  26898416 gttgtaagatgaacttaccaaaatatccctaatacatgg 26898454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 4638113 - 4638257
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||| | ||| |||||||||||||||||||| | || |||||||||||||| ||  | |||||||||||||||||||||||||| ||    
T  4638113 tgatacatgtaccaccctacgtgacaatacaccctttacatccatacaagattctgacacgtggtaacctagaccccacacaaatagaagataaagtatg 4638212  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  4638213 gttgtgagatgaacttaccaaaatatccataatatatggggtgta 4638257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 41861862 - 41861716
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  41861862 tgatacatgtaccactccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccatacaaatagaagataaagtgtg 41861763  T
Q  312 gttgtgagatgaacttaccaaaata--tccataatacatggggtgta 356  Q
    |||||||||| ||||||||||||||  || ||||||||| |||||||    
T  41861762 gttgtgagataaacttaccaaaatatctctataatacatagggtgta 41861716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 10573935 - 10573791
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||| |||||| ||||| | |||||||| |||||||||||||||| | |||||||| | ||||||||| |||||||||||||||||||    
T  10573935 tgatacatgtaccaccgcatgtgacaatatatcctttacacccacataaaattctgatatgtggcaatcttgaccccacataaatagaagataaagtgtg 10573836  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||    
T  10573835 gttgtgagatgaatttaccaaaatattcctaatacatggggtgta 10573791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 210 - 351
Target Start/End: Complemental strand, 9216489 - 9216348
Alignment:
Q  210 gatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtg 309  Q
    ||||||| || || ||||||||||| ||||||||| |||||||||||| |||||||||||| | ||||| ||  ||||||||||||||||||||||| ||    
T  9216489 gatgatatatataccaccccatgtgacaatacaccttttacatccacacaaaattctgacatgcggcaacttaaaccccacacaaatagaagataaaatg 9216390  T
Q  310 tggttgtgagatgaacttaccaaaatatccataatacatggg 351  Q
    |||||||||||||||||||||||||||||  |||| ||||||    
T  9216389 tggttgtgagatgaacttaccaaaatatctctaatgcatggg 9216348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 43317610 - 43317502
Alignment:
Q  231 tgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 330  Q
    ||||||||||||||| ||||| ||||| |||||||||||| |||||||| | ||||||||||||||||||||  ||||||| |||||||||||| ||| |    
T  43317610 tgtggcaatacaccccttacacccacacaaaattctgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatc 43317511  T
Q  331 aaaatatcc 339  Q
    |||||||||    
T  43317510 aaaatatcc 43317502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 231 - 356
Target Start/End: Original strand, 5194164 - 5194289
Alignment:
Q  231 tgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 330  Q
    |||||||||||| || ||||| ||||| |||||| ||||| |||||||| | ||||||||||||||||||||  ||||||| |||||||||||| ||| |    
T  5194164 tgtggcaatacaacccttacacccacacaaaattttgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatc 5194263  T
Q  331 aaaatatccataatacatggggtgta 356  Q
    ||||||||| ||| |||| |||||||    
T  5194264 aaaatatccttaaaacatagggtgta 5194289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 24280557 - 24280635
Alignment:
Q  259 aaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatat 337  Q
    |||||||||| |  |||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  24280557 aaaattctgatatatggcaacttggaccccacacaaatagaagagaaagtgtgattgtgagatgaatttaccaaaatat 24280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 47279638 - 47279744
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| || ||||| || |||||||||||||| | |||||||||||||||| | |||| ||| |||| || | | |||||||||||||||||||    
T  47279638 tgatacatgtaccatcccatctgacaatacaccctttatacccacataaaattctgatatgtggtaatctggatcctatataaatagaagataaagtgtg 47279737  T
Q  312 gttgtga 318  Q
    |||||||    
T  47279738 gttgtga 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 27535145 - 27535211
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||  | ||||||||||||||| |  ||||||||||| |||||||||||| |||||||    
T  27535145 tgatacatgtattcctccatgtggcaatacatctcttacatccacacaaaattctgacatgtggcaa 27535211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 353
Target Start/End: Complemental strand, 31513386 - 31513332
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggt 353  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||||||||    
T  31513386 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggt 31513332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 38160661 - 38160694
Alignment:
Q  353 tgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttcc 38160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 386
Target Start/End: Complemental strand, 9216333 - 9216302
Alignment:
Q  355 taggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||||||    
T  9216333 taggaataaagggtgttcatgtaacattttcc 9216302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 31408547 - 31408613
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   ||||||||| |||||||||  ||||| ||||||||||| |||||| |||||||    
T  31408547 tgatacatgtacacccccatgtgacaatacacctcttacacccacataaaatcctgacatgtggcaa 31408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 40237007 - 40236961
Alignment:
Q  310 tggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  40237007 tggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgta 40236961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 40237105 - 40237039
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  40237105 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 40237039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 31408634 - 31408691
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||| ||||| |||||||||||||| |||| |||||| ||||    
T  31408634 aagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgta 31408691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 386
Target Start/End: Complemental strand, 41861702 - 41861674
Alignment:
Q  358 gaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||    
T  41861702 gaataaagggtgttcatgtaacattttcc 41861674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 46033875 - 46033831
Alignment:
Q  232 gtggcaatacacccttta-catccacataaaattctgacacgtgg 275  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  46033875 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 46033831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 3e-59; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 208 - 356
Target Start/End: Original strand, 24203897 - 24204045
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  24203897 gtgatgatacatgtaccactccatgtgacaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaatataaag 24203996  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  24203997 tgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgta 24204045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 21280119 - 21279976
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21280119 gtgatgatacatgtaccaccccatgtggcaatataccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaag 21280020  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggg 351  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  21280019 tgtggttgtgagatgaatttaccaaaatatccctaatacatggg 21279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 9698246 - 9698433
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9698246 atgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgt 9698345  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  9698346 ggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 30014533 - 30014343
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||||    
T  30014533 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggtaacttggaccccatataaatagaagataaag 30014434  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataataca------------tggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    | |||||||||||||||||||||||||||| | |||||||            |||| ||||||||||||||||||||||||||||||||||    
T  30014433 tatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 3213586 - 3213442
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  3213586 tgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtatg 3213487  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||    
T  3213486 gttgtgaaatgaatttaccaaaatatccttaatacatggggtgta 3213442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 21293591 - 21293735
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21293591 tgatacatgtaccacctcatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagataaagtgtg 21293690  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||    
T  21293691 gttgtgaaatgaatttaccaaaatatccttaatacatggggtgta 21293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 7292933 - 7292789
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||||||||||||||||||||||||||  || | ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7292933 tgatacatgtaccaccccatgtggcaatacaccctttacacacaaacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 7292834  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  7292833 gttgtgagatgaacttaccaaaatatccctaatacatagggtgta 7292789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 30736172 - 30736024
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  30736172 gtgatgatacatgtaccatcccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataaag 30736073  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||||||||||||||||||||||||  ||||||||| ||||||    
T  30736072 tgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgta 30736024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 209 - 356
Target Start/End: Complemental strand, 7367738 - 7367591
Alignment:
Q  209 tgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagt 308  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||||| |||||||| |||||||    
T  7367738 tgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggatcccacataaatagaaaataaagt 7367639  T
Q  309 gtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7367638 gtggttgtgagatgaacttaccaaaatatccctaatacatgggatgta 7367591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 7273245 - 7273435
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||| |||||| |||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  7273245 gtgatgatgcatgtaccaccccatgtggtaatacactctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaag 7273344  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatgg------------ggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||| ||||||||||||||||||||||||||  ||||||||||            ||||||||||||||||||||||||||||||||||||    
T  7273345 tgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 26669923 - 26670109
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  26669923 tgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtg 26670022  T
Q  312 gttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||| ||||||            ||| ||||||||||||||||||||||||||||||||||||    
T  26670023 gttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 13743135 - 13743279
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||| ||||||||||| | |||||||| ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13743135 tgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 13743234  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  13743235 gttgtgagatgaacttaccaaaatatccctaatacatggggtgta 13743279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 13748635 - 13748779
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||| ||||||||||| | |||||||| ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13748635 tgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 13748734  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  13748735 gttgtgagatgaacttaccaaaatatccctaatacatggggtgta 13748779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 26466989 - 26466799
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    |||||||||||| || ||||| ||||||||||||||| |||||| ||| | ||||| |||| |||||||||  || |||||| |||||||||||||||||    
T  26466989 gtgatgatacatttaccaccctatgtggcaatacaccttttacacccatacaaaatcctgatacgtggcaacctgaaccccaaacaaatagaagataaag 26466890  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| || ||||||            ||||||||||||||||||||||||| ||||||||||||||    
T  26466889 tgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 27441641 - 27441592
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  27441641 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacat 27441592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 33242502 - 33242445
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| || |||||||||||| |||||||||| ||| ||||||||||||||||    
T  33242502 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgta 33242445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 27441713 - 27441662
Alignment:
Q  227 cccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||| |||||||    
T  27441713 cccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 27441662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 384
Target Start/End: Original strand, 24204051 - 24204085
Alignment:
Q  350 gggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    ||||||||||||||| |||||||||||||||||||    
T  24204051 gggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 33242589 - 33242523
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  33242589 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 33242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 33254012 - 33253955
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||| || |||||||||||| ||||||| || ||| |||| |||||||||||    
T  33254012 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgta 33253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 2614562 - 2614749
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2614562 atgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgt 2614661  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||| ||||||            ||||| ||||||||||||||||||||||||||||||||||    
T  2614662 ggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 208 - 386
Target Start/End: Complemental strand, 18034172 - 18033982
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  18034172 gtgatgatacatgtaccaccccatatggcaatacaccctttacacccatataaaattctgacacgtggcaacctggaccccacacaaatagaagataaag 18034073  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||||            |||| |||||||||||||||||||||||||||||||||||    
T  18034072 tgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 5257181 - 5257037
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  5257181 tgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtg 5257082  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  5257081 gttgtgagatgaaattaccaaaatatccctaatacatggggtgta 5257037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 212 - 356
Target Start/End: Original strand, 41334577 - 41334721
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41334577 tgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 41334676  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  41334677 gttgtgagatgaacttaccaaaatatccctaatacatagggtgta 41334721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 22512472 - 22512305
Alignment:
Q  231 tgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 330  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22512472 tgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 22512373  T
Q  331 aaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||| ||||||            |||| |||||||||||||||||||||||||||||||||||    
T  22512372 aaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 7617323 - 7617175
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| ||| || || |||||| |||||||||||||||    
T  7617323 gtgatgatacatgtatcaccccatgtggcaatacaccttttacaccaacacaaaattctgacatgtgacaacttagatcccacataaatagaagataaag 7617224  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7617223 tgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgta 7617175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 33801659 - 33801511
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||| ||||| |  ||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  33801659 gtgatgatatatgtaccttcccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataaag 33801560  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  33801559 tgtggttgtgagatgaacttactaaaatatccctaatacatggagtgta 33801511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 212 - 356
Target Start/End: Complemental strand, 38470765 - 38470621
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||    
T  38470765 tgatacatgtaccacctcatatggcaatacaccctttacacccacataaaattctgatacgtggtaatctggaccccacataaatagaagataaagtgtg 38470666  T
Q  312 gttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
     |||||| ||||| |||||||||||||| ||||||||||||||||    
T  38470665 attgtgaaatgaatttaccaaaatatccttaatacatggggtgta 38470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 25914906 - 25915002
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagata 304  Q
    ||||||||||||||| |||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  25914906 gtgatgatacatgtaccacctcatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 25915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 351
Target Start/End: Original strand, 39122381 - 39122486
Alignment:
Q  246 tttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccataata 345  Q
    |||||||||||| || ||||||||| |||||||  |  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||    
T  39122381 tttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtagttgtgagatgaatttaccaaaatattcctaata 39122480  T
Q  346 catggg 351  Q
    ||||||    
T  39122481 catggg 39122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 39122270 - 39122369
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||||||||| ||||||||||| ||||| | | |||||||||||| || ||||||||| |||||||  |  ||||||||||||||||||||||||||||    
T  39122270 tgatacatgtaccaccccatgtgacaatatatcatttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 33855104 - 33855143
Alignment:
Q  347 atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33855104 atggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 565
Target Start/End: Original strand, 11429808 - 11429888
Alignment:
Q  489 aaatatcacgtcccaagtcaagttggatgtggaaatcctgaagctacaaaa-----caagcttttgtgaaaacgtgaaaatc 565  Q
    |||||||||||||| || ||||||||| |||| |||||||||| |||||||     |||| |||||||||||||||||||||    
T  11429808 aaatatcacgtcccgaggcaagttggacgtgg-aatcctgaagttacaaaagttcgcaagtttttgtgaaaacgtgaaaatc 11429888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 17208173 - 17208116
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  17208173 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgta 17208116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 25915052 - 25915085
Alignment:
Q  351 ggtgtaggaataaagggtgttcatgtaacatttt 384  Q
    ||||||||||||||||||||||||||||||||||    
T  25915052 ggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 32473395 - 32473452
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| |||| ||||||    
T  32473395 aagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgta 32473452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 32473308 - 32473374
Alignment:
Q  212 tgatacatgtatcacc-ccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||| |||| |||||||||||||||||  ||||| ||||| |||||||||||| |||||||    
T  32473308 tgatacatgta-cacctccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 32473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 17208263 - 17208194
Alignment:
Q  209 tgatgatacatgtatcacccc-atgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||||| |||||| ||||| |||||||||  ||||||||||| ||||| |||||| |||||||    
T  17208263 tgatgatacatgta-cacccctatgtgacaatacacctcttacatccacacaaaatcctgacatgtggcaa 17208194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 30622633 - 30622699
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    |||||||||||   |||||||||||||||||||  ||||| ||||| |||||| ||||| |||||||    
T  30622633 tgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaattttgacatgtggcaa 30622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 386
Target Start/End: Complemental strand, 7617161 - 7617133
Alignment:
Q  358 gaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||    
T  7617161 gaataaagggtgttcatgtaacattttcc 7617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 30622720 - 30622772
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggg 351  Q
    |||| ||||| |||||||||||| || |||||||||||||| |||| ||||||    
T  30622720 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggg 30622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 386
Target Start/End: Original strand, 41334735 - 41334763
Alignment:
Q  358 gaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||||    
T  41334735 gaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 14099 - 14288
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  14099 gtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgga-cccacacaaatagaagataaag 14197  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||||            ||||||||||| ||||||||||||||||||||||||||||    
T  14198 tgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 24427 - 24616
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  24427 gtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgga-cccacacaaatagaagataaag 24525  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||| ||||||||| ||||||            ||||||||||| ||||||||||||||||||||||||||||    
T  24526 tgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 212 - 386
Target Start/End: Complemental strand, 871 - 685
Alignment:
Q  212 tgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgtg 311  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  871 tgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaagataaagtgtg 772  T
Q  312 gttgtgagatgaacttaccaaaatatccataatac------------atggggtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    |||||||||||||||||||||||||||| ||||||            ||| ||||||||||||||||||||||||||||||||||||    
T  771 gttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 208 - 356
Target Start/End: Complemental strand, 11441 - 11293
Alignment:
Q  208 gtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaag 307  Q
    ||||||||||||||| || |||||||||||||||||  |||||| | ||| ||||||||||||||| |||| ||||||||||||  ||||||||||||||    
T  11441 gtgatgatacatgtaccatcccatgtggcaatacactatttacacctacacaaaattctgacacgtagcaacttggaccccacatcaatagaagataaag 11342  T
Q  308 tgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  11341 tgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgta 11293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 23334 - 23521
Alignment:
Q  211 atgatacatgtatcaccccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaatttggaccccacacaaatagaagataaagtgt 310  Q
    |||||||||| | ||||||||||| ||||||||  |||||| ||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||||    
T  23334 atgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgt 23433  T
Q  311 ggttgtgagatgaacttaccaaaatatccataatacatggg------------gtgtaggaataaagggtgttcatgtaacattttcc 386  Q
    | |||| |||||||||||||||||||||  |||||||||||            ||||||||||||||||||||||| |||||||||||    
T  23434 gattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 45720 - 45769
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacat 348  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||||||    
T  45720 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacat 45769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 45648 - 45699
Alignment:
Q  227 cccatgtggcaatacaccctttacatccacataaaattctgacacgtggcaa 278  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||| |||||||    
T  45648 cccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 45699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 35457 - 35514
Alignment:
Q  299 aagataaagtgtggttgtgagatgaacttaccaaaatatccataatacatggggtgta 356  Q
    |||| ||||| ||||||||||||||| ||||||| || ||| |||| |||||||||||    
T  35457 aagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgta 35514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University