View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20042_high_23 (Length: 277)
Name: NF20042_high_23
Description: NF20042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20042_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 9496850 - 9496602
Alignment:
| Q |
19 |
tcttacatgttcctggtcacgtgctatctgtgacattgcaatcaggcggtcctgcagcaaggcagcaggtaaaggttggatcagaggctgtactgcaatg |
118 |
Q |
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| T |
9496850 |
tcttacatgttcctggtcacgtgctatctgtgacattgcaatcaggcggtcctgcagcaaggcagcaggtaaaggttgaatcagaggctgtactgcaatg |
9496751 |
T |
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| Q |
119 |
tttttacctctccaagaaggccacacaacttcagcaccatccattcttaaacaaccatcctctaaattacttccatcatgataccagcctctcattcccc |
218 |
Q |
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| T |
9496750 |
tttttacctctccaagaaggccacacaacttcagcaccatccattcttaaacaaccatcctctaaattacttccatcatgataccagcctctcattcccc |
9496651 |
T |
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| Q |
219 |
agtgtcttgggctggaactaccagacctaacagttggaaaacccctttg |
267 |
Q |
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| T |
9496650 |
agtgtcttgggctggaactaccagacctaacagttggaaaacccctttg |
9496602 |
T |
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