View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20045_low_21 (Length: 294)
Name: NF20045_low_21
Description: NF20045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20045_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 277
Target Start/End: Original strand, 10584612 - 10584872
Alignment:
| Q |
13 |
aatatatataatgcaacaagtgtaccaaataattaggtaaaattttatgctcttataacatgttattattgattgatctcaaaatcgatgatacctaaga |
112 |
Q |
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| T |
10584612 |
aatatatataatgcaacaagtgtaccaaataattaggtaaaattttatgctctta--acatgttattattgattgatctcaaaatcgatgatacctaaga |
10584709 |
T |
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| Q |
113 |
tgcgattgaatagtttaaagaaatatgcattttttatgttgattgtatatttgtgaattctctacctctctctaaattgtttgtttattttgttgtctct |
212 |
Q |
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|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10584710 |
tgcgattgaatagtttaaaggaatatgcatttcttatgttgattgtatatttgtgaattctctacctctctctaaattgtttgtttattttgttgtctct |
10584809 |
T |
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| Q |
213 |
catcctttctctcgacagaggaagctccaaatgtaaaacaagaacaggtgatatgcccacctcat |
277 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10584810 |
catcctt--tctcgacagaggaagctccaaatgtaaaacaagaacaggtgatatgcccacctcat |
10584872 |
T |
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