View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20045_low_26 (Length: 239)
Name: NF20045_low_26
Description: NF20045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20045_low_26 |
 | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
| [»] scaffold0434 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0210 (1 HSPs) |
| | |
|
| [»] scaffold0049 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 2880335 - 2880543
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2880335 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
2880434 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2880435 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacactggcgaaaa |
2880534 |
T |
|
| Q |
201 |
tcgctatca |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
2880535 |
tcgctatca |
2880543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 2867876 - 2868084
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2867876 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattacaatcacacaaattcagtacctttttgttcaattaag |
2867975 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2867976 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacacttggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
2868075 |
T |
|
| Q |
201 |
tcgctatca |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
2868076 |
tcgctatca |
2868084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 35024083 - 35024293
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcaca--caaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
35024083 |
catccctgacaattttcttattatagttcaatccaattttactttacttaactttcattattgcaatcacacacaaattcagtaactttttgttcaatta |
35024182 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35024183 |
aatcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
35024282 |
T |
|
| Q |
199 |
aatcgctatca |
209 |
Q |
| |
|
||||||||||| |
|
|
| T |
35024283 |
aatcgctatca |
35024293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 33354444 - 33354605
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| ||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33354444 |
ttaatttacattattgctatcaaacatatctcgtacctttttgttcaattaagtaacaaatattatttgacagtataacgcgatcctcgagttcgacact |
33354543 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33354544 |
cggtcttaccgttttaattttattacttgcacgatttcgtacacttgcgaaaatcgctatca |
33354605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 28872126 - 28872210
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatc |
132 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |
|
|
| T |
28872126 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatcattcgacagtataacgcgatc |
28872210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 20026617 - 20026702
Alignment:
| Q |
123 |
taacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||| |||| |||| ||||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
20026617 |
taacgcgaccctcaagtttgacactcaaagttaccgtttaaattt-actacttgtacgatttcgtacacttgtaaaaatcgctatca |
20026702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 31472756 - 31472676
Alignment:
| Q |
112 |
attcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacactt |
193 |
Q |
| |
|
|||||||| ||| |||| ||||||||||| ||||| | | || ||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
31472756 |
attcgacaatatgacgcagtcctcgagttcaacacttgttttt-ccgttttaactttactaattgcacgatttcgtacactt |
31472676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 31499325 - 31499238
Alignment:
| Q |
112 |
attcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||| ||||| | | || ||||||||| ||||||| || || |||||||||||||||| |||| |
|
|
| T |
31499325 |
attcgacaatatgacgcggtcctcgagttcaacacttgttttt-ccgttttaactttactaattacatgatttcgtacacttgcaaaaa |
31499238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 31513849 - 31513753
Alignment:
| Q |
112 |
attcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||| ||| |||| ||||||||||| ||||| || || ||||||||| ||||||| || ||||||| |||||||||| ||||||| ||||| |
|
|
| T |
31513849 |
attcgacaatatgacgcagtcctcgagttcaacact-tgtttttccgttttaactttactaattatacgattttgtacacttgcaaaaatcggtatca |
31513753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 31493939 - 31493852
Alignment:
| Q |
112 |
attcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
|||||||| ||| |||| ||||||||||| ||||| | | || ||||||||| ||||||| || || |||||||||||||||| |||| |
|
|
| T |
31493939 |
attcgacaatatgacgcagtcctcgagttcaacacttgttttt-ccgttttaactttactaattacatgatttcgtacacttgcaaaaa |
31493852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 53437371 - 53437580
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
53437371 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgtaatcacacaaattcagtacctttttgttcaattaag |
53437470 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
53437471 |
ttataaatactattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgattttgtacacttgcgaaaa |
53437570 |
T |
|
| Q |
201 |
tcgctatcac |
210 |
Q |
| |
|
|||||||||| |
|
|
| T |
53437571 |
tcgctatcac |
53437580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 53438804 - 53439013
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
53438804 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgtaatcacacaaattcagtacctttttgttcaattaag |
53438903 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
53438904 |
ttataaatactattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgattttgtacacttgcgaaaa |
53439003 |
T |
|
| Q |
201 |
tcgctatcac |
210 |
Q |
| |
|
|||||||||| |
|
|
| T |
53439004 |
tcgctatcac |
53439013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 55584816 - 55584608
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
55584816 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattatcgcaatcaaacaaattcagtacctttttgttcaattaag |
55584717 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55584716 |
ttataaatactattcgacagtataacgcgatcctcgagttcgacactcgttcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
55584617 |
T |
|
| Q |
201 |
tcgctatca |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
55584616 |
tcgctatca |
55584608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 16420607 - 16420800
Alignment:
| Q |
15 |
ttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattatt |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16420607 |
ttattattatagttcattccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattatt |
16420706 |
T |
|
| Q |
115 |
cgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
16420707 |
cgacagtataacgcgatcctcgagttcgacactcggtcttaccg-tttaaatttactacttgaacgattttgtacacttgcgaaaatcgctatca |
16420800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 46671008 - 46670803
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
|||| |||||||| |||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
46671008 |
catcgctgacaattttattactataaagttcaaaccaattttactttgcttaattttcattattgcaatcaaccaaattcagtacctttttgttcaatta |
46670909 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46670908 |
agttataaatattattcgacagtataacgcgatcctcgagtttaatactcgatcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
46670809 |
T |
|
| Q |
199 |
aatcgc |
204 |
Q |
| |
|
|||||| |
|
|
| T |
46670808 |
aatcgc |
46670803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 9341700 - 9341539
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
9341700 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatttttcgacagtataacgcgatccttgagttcgacact |
9341601 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
9341600 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaaccgctatca |
9341539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 9352801 - 9352640
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
9352801 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatttttcgacagtataacgcgatccttgagttcgacact |
9352702 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
9352701 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaaccgctatca |
9352640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 6673228 - 6673067
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||||| || |||||||||||| |
|
|
| T |
6673228 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatcattcgacagtataacgcgattcttgagttcgacact |
6673129 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6673128 |
cggtcttaacgtttaaaatttactacttgaacgatttcgtacacttgcgaaaatcgctatca |
6673067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 42515255 - 42515084
Alignment:
| Q |
25 |
agttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtata |
124 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||||| |||| |||| | || ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
42515255 |
agttcaaaccaattttatttttcttaattttcattattgctatcaaacaagtccattacctttttgttcaattaagtcacaaatattat--------ata |
42515164 |
T |
|
| Q |
125 |
acgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgc |
204 |
Q |
| |
|
||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
42515163 |
acgagatcttcgagttcgagactcagtcttaccgttttaattttactacttgcacgatttcatacacttgcgaaaatcgc |
42515084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 987937 - 988020
Alignment:
| Q |
105 |
aaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgta |
188 |
Q |
| |
|
||||| ||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
987937 |
aaataatattcgacaatataacgtgattctcgagttcgacattcgatcttaccgttttaattttactacttatacgatttcgta |
988020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 40841055 - 40841134
Alignment:
| Q |
85 |
tttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaa |
164 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| ||| |||| |||||| || | || ||||||| |||||||||||||| |
|
|
| T |
40841055 |
tttttgttcaatcaagtaacaaatattattcaacaacataaagcgatcttcaaatttgacactcaatcttaccgttttaa |
40841134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 41586321 - 41586515
Alignment:
| Q |
15 |
ttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattatt |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
41586321 |
ttattattatagttcaatccaattttactttaattaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcaaaaatattatt |
41586420 |
T |
|
| Q |
115 |
cgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41586421 |
cgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcttacacttgcgaaaatcgctatca |
41586515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 32484129 - 32484245
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||| ||||||||| | |||| |||||| || |||||||||||| | |||||| | ||||| ||||||||| |||||||||| |||| | ||||||||| |
|
|
| T |
32484129 |
ttaatgttcattattcctatcaaacaaatccaatacctttttgtttagttaagttataaatagtattcgacattataacgcgaacctcaaattcgacact |
32484228 |
T |
|
| Q |
148 |
cggtcttaccgttttaa |
164 |
Q |
| |
|
|||||||||| |||||| |
|
|
| T |
32484229 |
cggtcttaccattttaa |
32484245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 39890 - 39682
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39890 |
catccctgacaatcttattattatagttcaatccaattatactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
39791 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| | ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39790 |
ttataaatactattcgagagtataacgcaatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacatttgcgaaaa |
39691 |
T |
|
| Q |
201 |
tcgctatca |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
39690 |
tcgctatca |
39682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21221996 - 21222204
Alignment:
| Q |
1 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21221996 |
catccctgacaatcttattattatagttcaatccaattttactttacttaattttcattattgcaatcacacaaatctggtacctttttgttcaattaag |
21222095 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21222096 |
taacaagtattattcgacagtataacgcgatccttgagttcgacactcgatcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaa |
21222195 |
T |
|
| Q |
201 |
tcgctatca |
209 |
Q |
| |
|
||| ||||| |
|
|
| T |
21222196 |
tcgttatca |
21222204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 11773352 - 11773141
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
||||||| |||| ||||||||||| |||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11773352 |
catccctcacaactttattattataaagttcaaaccaattt-actttgcttaattttcattattgcaatcgaacaaattcagtacctttttgttcaatta |
11773254 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | ||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11773253 |
agttataaatactattcgacagtataacacgatcctcgagttccacactcggtcttaccgttttaattttactacttgcatgatttcgtacacttgcgaa |
11773154 |
T |
|
| Q |
199 |
aatcgctatcact |
211 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11773153 |
aatcgctatcact |
11773141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 12678586 - 12678425
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| ||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12678586 |
ttaatttacattattgctatcgaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatcctcgagttcgacact |
12678487 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12678486 |
cgatcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
12678425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 27088421 - 27088211
Alignment:
| Q |
1 |
catccctgacaatcttattattat--agttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
||||||| ||||| |||||||||| |||| || |||||||||||| || |||||||||||||||| |||| | ||||| ||||| ||||||||||||| |
|
|
| T |
27088421 |
catccctaacaattttattattatcaagtttaaaccaattttacttcacataattttcattattgctatcaaaaaaatttagtactattttgttcaatta |
27088322 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | ||| | ||||| | |||||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27088321 |
agttataaacactattcaatagtataacatgatcttcgagtttgacactgtgtcttaccgttttaattttactacttgcacgatttcgtacagtagcgaa |
27088222 |
T |
|
| Q |
199 |
aatcgctatca |
209 |
Q |
| |
|
||||||||||| |
|
|
| T |
27088221 |
aatcgctatca |
27088211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 36530172 - 36530330
Alignment:
| Q |
49 |
taattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacactc |
148 |
Q |
| |
|
|||||||||||||||| || | ||||| | || ||||||| |||||||||||||| |||| ||||| ||| || | ||| ||||||||||||||||||| |
|
|
| T |
36530172 |
taattttcattattgctataaaacaaacttagaacctttt-gttcaattaagtcataaattctattcaacattaaaccgcaatcctcgagttcgacactc |
36530270 |
T |
|
| Q |
149 |
ggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36530271 |
ggtcttaccgtttt-attttactacttgcacgatttcgtacacttgcgaaaatcgccatca |
36530330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 209
Target Start/End: Original strand, 36533615 - 36533773
Alignment:
| Q |
49 |
taattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacactc |
148 |
Q |
| |
|
|||||||||||||||| || | ||||| | || ||||||| |||||||||||||| |||| ||||| || || | ||| ||||||||||||||||||| |
|
|
| T |
36533615 |
taattttcattattgctataaaacaaacttagaacctttt-gttcaattaagtcataaattctattcatcattaaaccgcaatcctcgagttcgacactc |
36533713 |
T |
|
| Q |
149 |
ggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36533714 |
ggtcttaccgtttt-attttactacttgcacgatttcgtacacttgcgaaaatcgccatca |
36533773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 560124 - 560232
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||| ||||| || ||||||| |||||||||||| |
|
|
| T |
560124 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatcattcgcca--------cgatccttgagttcgacact |
560215 |
T |
|
| Q |
148 |
cggtcttaccgttttaa |
164 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
560216 |
cggtcttaccgttttaa |
560232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 9953777 - 9953567
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
9953777 |
catccctgacaactttattattataaagttcaaaccaattt-actttacttaattttcattattgcaatcaaacaaattgagtacctttttgttcaatta |
9953679 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9953678 |
agttataaatatcattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
9953579 |
T |
|
| Q |
199 |
aatcgctatcac |
210 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9953578 |
aatcgctatcac |
9953567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 23410029 - 23410240
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
||||||| |||| ||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
23410029 |
catccctaacaactttattattataaagttcaaaccaaatttactttgcttaattttcattattgcaatcaaacaaattcaggacctttttgttcaatta |
23410128 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacga-tttcgtacacttgcga |
197 |
Q |
| |
|
||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
23410129 |
agttataaatactattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgattttcgtacacttgtga |
23410228 |
T |
|
| Q |
198 |
aaatcgctatca |
209 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23410229 |
aaatcgctatca |
23410240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 23688429 - 23688245
Alignment:
| Q |
25 |
agttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtata |
124 |
Q |
| |
|
||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
23688429 |
agttcaaaccaaatttactttgcttaattttcattattgcaatcaaacaaattcagtacctttttgttcaattaagtagcaagtattattcgacagtata |
23688330 |
T |
|
| Q |
125 |
acgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|| |||| || ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23688329 |
acacgattcttgagtttgacactcggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaatcgctatca |
23688245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 30759032 - 30759193
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
30759032 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatccttgagttcgacact |
30759131 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
30759132 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaaccgctatca |
30759193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 25138053 - 25138213
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25138053 |
ttaatttacattattgctatcaaacaaatctcgtacctttt-gttcaattaagttataaatattattcgacagtataacgcgatcctcgagttcgacact |
25138151 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
25138152 |
cgatcttaccgttttaattttactacttacacgatttcgtacacttacgaaaatcgctatca |
25138213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 7747825 - 7748034
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
||||| ||||||| ||||||||||| |||||| |||||||| ||| |||||||||||||||||| |||| |||||| ||||||||||||||| ||| |
|
|
| T |
7747825 |
catccttgacaattttattattataaagttcaaaccaattttt-tttgcttaattttcattattgctatcaaacaaatctcgtacctttttgttcactta |
7747923 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| || | ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
7747924 |
agtaacgagtattattcgacagtataacacgatcttcgagttcgacactcggtcttaccgatttaattttactacttgcacaatttcgttaacttgcgaa |
7748023 |
T |
|
| Q |
199 |
aatcgctatca |
209 |
Q |
| |
|
||||| ||||| |
|
|
| T |
7748024 |
aatcgttatca |
7748034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 201
Target Start/End: Complemental strand, 42779381 - 42779220
Alignment:
| Q |
38 |
tttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcga |
137 |
Q |
| |
|
|||||||||| ||| |||||||||||| || | |||||| ||| | |||||||||||||||| | |||| ||||| |||||| | ||| |||||||| |
|
|
| T |
42779381 |
tttactttacgtaactttcattattgcgattaaacaaatctcgtaaccttttgttcaattaagttataaatcctattcaacagtaaaccgcaatcctcga |
42779282 |
T |
|
| Q |
138 |
gttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaat |
201 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42779281 |
gttcgatactcggtcttaccgttttaa--ttactacttgcacgatttcgtacacttgcgaaaat |
42779220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 45280181 - 45280145
Alignment:
| Q |
166 |
tttactacttgcacgatttcgtacacttgcgaaaatc |
202 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
45280181 |
tttactacttgaacgatttcgtacacttgtgaaaatc |
45280145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 3 - 210
Target Start/End: Complemental strand, 44679594 - 44679385
Alignment:
| Q |
3 |
tccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaag |
100 |
Q |
| |
|
|||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| |
|
|
| T |
44679594 |
tccctgacaactttattattataaagttcaaaccaaatttactttacttaattttcattattgcaatcaaacaaattcagcacatttttgttcaattaag |
44679495 |
T |
|
| Q |
101 |
tcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
200 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44679494 |
ttataaatactattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaa |
44679395 |
T |
|
| Q |
201 |
tcgctatcac |
210 |
Q |
| |
|
||||| |||| |
|
|
| T |
44679394 |
tcgctttcac |
44679385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 28634165 - 28634375
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
|||||||||||| || |||||||| |||||| ||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
28634165 |
catccctgacaactttcttattataaagttcaaaccagatttattttgcttaattttcattattgcaatcaaacaaattcagtacctttttgttcaatta |
28634264 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28634265 |
agttataaatattattcgacaatataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
28634364 |
T |
|
| Q |
199 |
aatcgctatca |
209 |
Q |
| |
|
||||||||||| |
|
|
| T |
28634365 |
aatcgctatca |
28634375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 41363413 - 41363609
Alignment:
| Q |
15 |
ttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatatta |
112 |
Q |
| |
|
||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| | ||||| || |
|
|
| T |
41363413 |
ttattattataaagttcaaaccaaatttactttgcttaattttcattattgcaatcaaacaaattaagtacctttttgttcgattaagttataaataata |
41363512 |
T |
|
| Q |
113 |
ttcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41363513 |
ttcgacagtataacgcgatcctcgagttcgacactcgatcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
41363609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 11925417 - 11925255
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11925417 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatccttgagttcgacact |
11925318 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatcac |
210 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11925317 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaatcgctatcac |
11925255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 7885482 - 7885410
Alignment:
| Q |
129 |
gatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaat |
201 |
Q |
| |
|
|||||| |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||| |
|
|
| T |
7885482 |
gatccttgagttcaacactcaatcttaccgttttaattttactacttacacgatcatgtacacttgcaaaaat |
7885410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0434 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0434
Description:
Target: scaffold0434; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 11517 - 11726
Alignment:
| Q |
1 |
catccctgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaatta |
98 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11517 |
catccctgacaactttattattataaagttcaaaccaatttaa-tttgcttaattttcattattgcaatcaaacaaattcagtacctttttgttcaatta |
11615 |
T |
|
| Q |
99 |
agtcacaaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaa |
198 |
Q |
| |
|
||| | ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11616 |
agttataaatactattcgacggtataacgcgatcctcgagttcgacactcgatcttaccgttttaattttactacttgcacgatttcgtacacttacgaa |
11715 |
T |
|
| Q |
199 |
aatcgctatca |
209 |
Q |
| |
|
||||||||||| |
|
|
| T |
11716 |
aatcgctatca |
11726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 276003 - 276202
Alignment:
| Q |
7 |
tgacaatcttattattata--gttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcac |
104 |
Q |
| |
|
||||||| ||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| | |
|
|
| T |
276003 |
tgacaattttattattataaagttcaaaccaattt-actttgcttaattttcattattgcaatcaaacaaattcggtacctttttgttcaattaagttat |
276101 |
T |
|
| Q |
105 |
aaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgc |
204 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
276102 |
aaatat----cgacaatataacgcgatcctcgagttcgaaactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcac |
276197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 23036 - 22878
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23036 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatcctcgagttcgacact |
22937 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgcta |
206 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22936 |
cgatcttactgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgcta |
22878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 38325 - 38164
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38325 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatccttgagttcgacact |
38226 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38225 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaatcgctatca |
38164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 10333301 - 10333462
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
10333301 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtatttttcgacagtataacgcgatccttgagttcgacact |
10333400 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
10333401 |
cggtcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaaccgctatca |
10333462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 9330739 - 9330900
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| ||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||| |||||||||||| |
|
|
| T |
9330739 |
ttaatttacattattgctatcaaacaaatcttgtacctttttgttcaattaagtctcaagtatcattcaacagtataacgcgatccttgagttcgacact |
9330838 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9330839 |
cgctcttaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaatcgctatca |
9330900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 40455308 - 40455477
Alignment:
| Q |
34 |
caattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcc |
133 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||| ||||| || |||||||||||| | |||||||| |||||||||| || |||||||| |||||| |
|
|
| T |
40455308 |
caattttaaattgcttaattttcattattgttatcaaacaaacccaatacctttttgtttagttaagtcataaatattatttgatagtataacacgatcc |
40455407 |
T |
|
| Q |
134 |
tcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcg |
203 |
Q |
| |
|
||||| || |||||| |||| ||||||||||||||||| |||||| |||||| ||||||||| ||||||| |
|
|
| T |
40455408 |
tcgagctctacactcagtctcaccgttttaattttactgcttgcatgatttcatacacttgcaaaaatcg |
40455477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 185
Target Start/End: Original strand, 12104028 - 12104179
Alignment:
| Q |
34 |
caattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcc |
133 |
Q |
| |
|
|||| ||| ||| |||||||||||| ||||| ||| |||||| | || ||||||||| | ||| || | ||||||||||| | |||||||| |||||| |
|
|
| T |
12104028 |
caatcttattttgcttaattttcataattgctatccaacaaatctactaactttttgtttagttatgttaaaaatattattcaagagtataacacgatcc |
12104127 |
T |
|
| Q |
134 |
tcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttc |
185 |
Q |
| |
|
||||||| || ||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
12104128 |
tcgagtttgatactcggtcttaccattttaattttactaattgcacgatttc |
12104179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 14647415 - 14647317
Alignment:
| Q |
108 |
tattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctat |
207 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||| || ||||||| |||||||||||||| ||||| |
|
|
| T |
14647415 |
tattattcgatagtataacgcaatcctcgagttc-acactcggttttaccattttaattttactactttcatgatttcgaacacttgcgaaaattgctat |
14647317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 14663900 - 14664076
Alignment:
| Q |
25 |
agttcaatccaattttactttacttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtc-acaaatattattcgacagtat |
123 |
Q |
| |
|
||||||| | ||| ||| ||| |||||||||||| |||| ||| |||||| |||| ||||| ||||||||| | | ||||||||||| | ||||| |
|
|
| T |
14663900 |
agttcaaacgaatcttaatttgcttaattttcataattgatatccaacaaatctagtaattttttcttcaattaaatatataaatattattcaagagtat |
14663999 |
T |
|
| Q |
124 |
aacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaat |
201 |
Q |
| |
|
|||||| |||||||||| ||||||| |||||| | |||||||||||||| || |||||||||| |||||| ||||||| |
|
|
| T |
14664000 |
aacgcggtcctcgagtt-gacactcagtcttatcattttaattttactattttcacgatttcgaacacttacgaaaat |
14664076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 14641795 - 14641699
Alignment:
| Q |
105 |
aaatattattcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatc |
202 |
Q |
| |
|
||||||||||| ||||||||| || | |||||||| |||||||||||||||| |||||||||||||| || ||| |||| | |||||| |||||||| |
|
|
| T |
14641795 |
aaatattattcatcagtataacacggtactcgagtt-gacactcggtcttaccattttaattttactattttcacaattttgaacacttacgaaaatc |
14641699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 26180062 - 26180003
Alignment:
| Q |
84 |
ctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcga |
143 |
Q |
| |
|
||||||||||| |||||| | || ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26180062 |
ctttttgttcagttaagttataagtattattcgacagtataacatgatcctcgagttcga |
26180003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 10236511 - 10236585
Alignment:
| Q |
136 |
gagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatcac |
210 |
Q |
| |
|
||||| |||| | |||||||| |||||||||||| ||||| || |||||||||||||| |||||||| |||||| |
|
|
| T |
10236511 |
gagtttgacatttggtcttactgttttaattttataacttgtacaatttcgtacacttgtgaaaatcgttatcac |
10236585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 12071177 - 12071137
Alignment:
| Q |
126 |
cgcgatcctcgagttcgacactcggtcttaccgttttaattt |
167 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12071177 |
cgcgatcctcgagtg-gacactcggtcttaccgttttaattt |
12071137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 36216159 - 36216320
Alignment:
| Q |
48 |
ttaattttcattattgcaatcacacaaattcagtacctttttgttcaattaagtcacaaatattattcgacagtataacgcgatcctcgagttcgacact |
147 |
Q |
| |
|
||||||| ||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
36216159 |
ttaatttacattattgctatcaaacaaatctcgtacctttttgttcaattaagtaacaagtattattcgacagtataacgcgatccttgagttcgacact |
36216258 |
T |
|
| Q |
148 |
cggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||| |||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
36216259 |
cggtattaccgttttaaatttactacttgaacgatttcgtacacttgcgaaaaccgttatca |
36216320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 35765221 - 35765125
Alignment:
| Q |
113 |
ttcgacagtataacgcgatcctcgagttcgacactcggtcttaccgttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||| | ||| ||||| || |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35765221 |
ttcgacagtacatcgcaatccttgaattcgacactcggtcttaccgttttaagtttaccacttgcccgatttcgtacacttgcgaaaatcgctatca |
35765125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 30440904 - 30440854
Alignment:
| Q |
159 |
ttttaattttactacttgcacgatttcgtacacttgcgaaaatcgctatca |
209 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| |||| ||||||| ||||| |
|
|
| T |
30440904 |
ttttaattttgctacttgcacgattttgtacatttgcaaaaatcgttatca |
30440854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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