View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20047_high_20 (Length: 229)
Name: NF20047_high_20
Description: NF20047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20047_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 31307251 - 31307075
Alignment:
| Q |
35 |
tgttgtcaagtaggctaataatggttaaaaattcattccttaaataattaggaaatcaggagcccaaaccatacatttctcatataaatataatgagatg |
134 |
Q |
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| T |
31307251 |
tgttgtcaagtaggctaataatggttaaaaattcattc-ttaaataattaggaaatcaggagtccaaaccatacatttctcatataaatataatgagatg |
31307153 |
T |
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| Q |
135 |
cctcacatactatgctattctcttcattatttttagctgctcttttggctcccctaaagaaagaaataatcttgttta |
212 |
Q |
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| T |
31307152 |
cctcacatactatgctattctcttcattatttttagctgctcttttggctcccgtaaagaaagaaataatcttgttta |
31307075 |
T |
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