View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20047_low_12 (Length: 331)
Name: NF20047_low_12
Description: NF20047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20047_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 48492800 - 48493130
Alignment:
| Q |
1 |
gtaccttttgtttgattatttcttggaaagatttcttctccaagagggtccatttggaaatttggaggaagagaacgtttctctgacctttttaaatatg |
100 |
Q |
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| T |
48492800 |
gtaccttttgtttgattatttcttggaaagatttcttctccaagagggtccatttggaaatttggaggaagagaacgtttctctgacctttttaaatatg |
48492899 |
T |
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| Q |
101 |
ccaatatttcgagaacgataactacaacaattataataccagcaaggaatccatagcttgtcttccaagcattcgttgctcctgcagcttgcattcccaa |
200 |
Q |
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| T |
48492900 |
ccaatatttcgagaacgataactacaacaattataataccagcaaggaatccatagcttgtcttccaagcattcgttgctcctgcagcttgcattcccaa |
48492999 |
T |
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| Q |
201 |
tactatgttcaaggctgcaaagaatagtgccatccttccaaaccaactgtggtacaaattccacattttgcgaaacttggaatccctatttggtctcaag |
300 |
Q |
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| T |
48493000 |
tactatgttcaaggctgcaaagaatagtgccatccttccaaaccaactgtggtacaaattccacattttgcgaaacttggaatccctatttggtctcaag |
48493099 |
T |
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| Q |
301 |
aagaatgccaatatctgaacacacatggttt |
331 |
Q |
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| T |
48493100 |
aagaatgccaatatctgaacacacatggttt |
48493130 |
T |
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