View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20048_high_8 (Length: 284)
Name: NF20048_high_8
Description: NF20048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20048_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 3345469 - 3345738
Alignment:
| Q |
1 |
gcattcacaaagaatgtgctcagactttgaaattaatgtgaaaattacaaacatgctacacatttttgtgtttacttcaactagaattaaagctcaagga |
100 |
Q |
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| T |
3345469 |
gcattcacaaagaatgtgcttagactttgaaattaatgtgaaaattacaaacatgctacacatttttgtgtttacttcaactagaattaaagctcaagga |
3345568 |
T |
|
| Q |
101 |
aaaatgcatgacaatatcaacaacgttatgttaatatgaaagtaaatagaactagttgaacattaattgataatatgcaccaaatcaattaatattagct |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3345569 |
aaaatgcatgacaatatcaacaacattatgttaatatgaaagtaaatagaactagttgaacattaattgataatatgcaccaaatcaattaatattagct |
3345668 |
T |
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| Q |
201 |
atacttctcttaattgcaatccataaatttcaaagagagtgagttagcatacataccatggttataagtg |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3345669 |
atacttctcttaattgcaatccataaatttcaaagagagtgagttagcatacataccatggttataagtg |
3345738 |
T |
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