View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20049_low_4 (Length: 250)

Name: NF20049_low_4
Description: NF20049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20049_low_4
NF20049_low_4
[»] chr8 (64 HSPs)
chr8 (1-237)||(25642702-25642938)
chr8 (1-237)||(25383008-25383247)
chr8 (116-233)||(5590034-5590151)
chr8 (120-234)||(7242495-7242609)
chr8 (116-234)||(36060539-36060657)
chr8 (101-234)||(7413085-7413218)
chr8 (116-234)||(3886640-3886758)
chr8 (116-234)||(7012519-7012637)
chr8 (116-233)||(2317243-2317360)
chr8 (116-224)||(28565066-28565174)
chr8 (116-224)||(28572689-28572797)
chr8 (116-234)||(21435021-21435139)
chr8 (116-234)||(22658206-22658324)
chr8 (116-234)||(43117531-43117649)
chr8 (116-233)||(1184004-1184121)
chr8 (101-234)||(36108822-36108955)
chr8 (101-234)||(41837928-41838060)
chr8 (116-224)||(41169880-41169987)
chr8 (116-224)||(42555963-42556071)
chr8 (116-234)||(1098239-1098357)
chr8 (116-234)||(28564953-28565070)
chr8 (116-234)||(28572576-28572693)
chr8 (116-234)||(41388187-41388305)
chr8 (116-234)||(41837814-41837932)
chr8 (116-234)||(43117417-43117535)
chr8 (101-234)||(8995024-8995157)
chr8 (101-234)||(42556067-42556199)
chr8 (126-234)||(24796913-24797021)
chr8 (116-234)||(4231401-4231519)
chr8 (116-234)||(4697988-4698106)
chr8 (116-234)||(10092436-10092554)
chr8 (101-234)||(2317115-2317247)
chr8 (115-234)||(11635827-11635946)
chr8 (116-234)||(3659682-3659800)
chr8 (116-234)||(7413214-7413331)
chr8 (116-234)||(22658320-22658437)
chr8 (101-234)||(3886754-3886886)
chr8 (101-234)||(4231273-4231405)
chr8 (101-234)||(5590147-5590279)
chr8 (116-233)||(6316945-6317061)
chr8 (123-224)||(6317065-6317166)
chr8 (101-221)||(7422034-7422154)
chr8 (116-200)||(38567311-38567395)
chr8 (103-234)||(3659796-3659926)
chr8 (102-233)||(24797028-24797158)
chr8 (101-234)||(36060411-36060543)
chr8 (116-224)||(197271-197379)
chr8 (116-224)||(312108-312216)
chr8 (116-234)||(7012406-7012523)
chr8 (120-234)||(41169770-41169884)
chr8 (116-234)||(41388074-41388191)
chr8 (101-234)||(1098111-1098243)
chr8 (101-234)||(21434893-21435025)
chr8 (116-233)||(10092323-10092439)
chr8 (101-224)||(7242619-7242740)
chr8 (118-234)||(17836498-17836614)
chr8 (101-224)||(9830661-9830783)
chr8 (101-224)||(38567183-38567305)
chr8 (101-234)||(1183876-1184008)
chr8 (132-233)||(4697891-4697991)
chr8 (116-224)||(7421925-7422026)
chr8 (101-177)||(8996402-8996478)
chr8 (101-204)||(32017978-32018081)
chr8 (202-234)||(34934344-34934376)
[»] chr3 (54 HSPs)
chr3 (94-221)||(34660792-34660919)
chr3 (116-224)||(50527503-50527611)
chr3 (116-234)||(44254460-44254578)
chr3 (101-234)||(7160263-7160396)
chr3 (116-224)||(11232024-11232132)
chr3 (116-234)||(49657071-49657189)
chr3 (116-233)||(22729401-22729518)
chr3 (116-224)||(25246207-25246315)
chr3 (116-234)||(16908678-16908796)
chr3 (116-234)||(21259180-21259298)
chr3 (116-234)||(21259294-21259412)
chr3 (118-224)||(28952261-28952367)
chr3 (116-234)||(29125903-29126021)
chr3 (116-234)||(35083974-35084092)
chr3 (116-224)||(13594743-13594851)
chr3 (101-224)||(31174542-31174665)
chr3 (116-234)||(32270778-32270897)
chr3 (116-234)||(1092737-1092855)
chr3 (116-234)||(11232128-11232245)
chr3 (102-234)||(12251481-12251612)
chr3 (116-224)||(36633668-36633776)
chr3 (116-234)||(27742667-27742785)
chr3 (101-234)||(18163771-18163903)
chr3 (101-233)||(52202035-52202166)
chr3 (123-234)||(45045284-45045395)
chr3 (101-234)||(22729273-22729405)
chr3 (101-234)||(29126017-29126149)
chr3 (101-233)||(1092852-1092983)
chr3 (116-224)||(45045391-45045498)
chr3 (101-233)||(49657186-49657317)
chr3 (101-224)||(28952375-28952497)
chr3 (120-234)||(32270893-32271006)
chr3 (116-234)||(50527607-50527724)
chr3 (116-234)||(52202163-52202281)
chr3 (101-234)||(36633540-36633672)
chr3 (121-234)||(44254574-44254686)
chr3 (116-224)||(12251377-12251485)
chr3 (102-234)||(21259408-21259539)
chr3 (101-224)||(49169846-49169968)
chr3 (116-234)||(35083861-35083978)
chr3 (101-234)||(13594847-13594979)
chr3 (144-234)||(16908792-16908881)
chr3 (116-234)||(27742554-27742671)
chr3 (101-234)||(52571398-52571530)
chr3 (101-224)||(44205465-44205588)
chr3 (116-207)||(744035-744125)
chr3 (101-234)||(2618938-2619070)
chr3 (101-224)||(4618204-4618324)
chr3 (146-234)||(52571292-52571380)
chr3 (119-181)||(49169977-49170039)
chr3 (101-149)||(25894698-25894746)
chr3 (123-207)||(52499197-52499281)
chr3 (101-181)||(18657894-18657974)
chr3 (101-149)||(25911665-25911713)
[»] chr7 (65 HSPs)
chr7 (101-234)||(25174200-25174333)
chr7 (101-233)||(8461752-8461884)
chr7 (116-234)||(40055772-40055890)
chr7 (116-234)||(46027861-46027979)
chr7 (116-233)||(9624177-9624294)
chr7 (116-234)||(17167048-17167166)
chr7 (116-222)||(31065494-31065600)
chr7 (103-233)||(31931884-31932014)
chr7 (116-234)||(36358169-36358287)
chr7 (116-234)||(44142942-44143060)
chr7 (115-222)||(46828821-46828927)
chr7 (116-234)||(36675346-36675464)
chr7 (116-234)||(44723922-44724040)
chr7 (101-234)||(29075158-29075290)
chr7 (101-234)||(46027733-46027865)
chr7 (116-224)||(26873884-26873992)
chr7 (116-234)||(22723635-22723753)
chr7 (116-234)||(26873771-26873888)
chr7 (116-234)||(43859272-43859390)
chr7 (116-233)||(41367840-41367957)
chr7 (116-233)||(44467881-44467998)
chr7 (101-233)||(31428790-31428921)
chr7 (116-224)||(45350232-45350340)
chr7 (116-234)||(23469255-23469373)
chr7 (101-234)||(22723749-22723881)
chr7 (101-234)||(23562620-23562752)
chr7 (116-233)||(42241789-42241906)
chr7 (116-234)||(17166934-17167052)
chr7 (102-224)||(28754860-28754981)
chr7 (116-234)||(31065596-31065713)
chr7 (116-234)||(31428918-31429036)
chr7 (101-234)||(44467994-44468126)
chr7 (101-233)||(36358284-36358415)
chr7 (101-224)||(18104301-18104423)
chr7 (119-234)||(23469369-23469483)
chr7 (101-234)||(9624049-9624181)
chr7 (101-206)||(22499778-22499883)
chr7 (101-234)||(29502104-29502237)
chr7 (101-234)||(36675460-36675592)
chr7 (101-234)||(43859144-43859276)
chr7 (131-234)||(16834134-16834237)
chr7 (116-234)||(29075054-29075162)
chr7 (116-234)||(44724036-44724153)
chr7 (101-234)||(9014445-9014578)
chr7 (101-234)||(45350104-45350236)
chr7 (144-234)||(29663010-29663100)
chr7 (116-234)||(39976502-39976620)
chr7 (101-234)||(16834250-16834382)
chr7 (101-234)||(30781064-30781196)
chr7 (101-233)||(39976374-39976505)
chr7 (101-233)||(42241903-42242034)
chr7 (116-234)||(41367727-41367844)
chr7 (101-234)||(16649569-16649701)
chr7 (101-234)||(17623930-17624062)
chr7 (101-213)||(40883335-40883447)
chr7 (123-222)||(4248984-4249083)
chr7 (123-234)||(40055666-40055776)
chr7 (101-234)||(44142815-44142946)
chr7 (125-219)||(14629632-14629726)
chr7 (167-233)||(24779614-24779680)
chr7 (101-234)||(9013869-9014001)
chr7 (119-180)||(22566606-22566667)
chr7 (170-234)||(4248890-4248954)
chr7 (101-224)||(8727775-8727898)
chr7 (101-129)||(29662987-29663015)
[»] chr1 (76 HSPs)
chr1 (116-234)||(40567147-40567265)
chr1 (116-234)||(44052317-44052435)
chr1 (116-234)||(47561908-47562026)
chr1 (116-234)||(45837025-45837143)
chr1 (116-234)||(48708275-48708393)
chr1 (101-234)||(51139739-51139871)
chr1 (116-224)||(8086411-8086519)
chr1 (116-224)||(16692817-16692925)
chr1 (120-234)||(23177527-23177641)
chr1 (116-234)||(25298946-25299064)
chr1 (116-234)||(37125874-37125992)
chr1 (116-224)||(29981575-29981683)
chr1 (116-224)||(33011925-33012033)
chr1 (116-224)||(40428649-40428757)
chr1 (116-224)||(51139867-51139975)
chr1 (116-234)||(24542752-24542870)
chr1 (116-234)||(24542866-24542984)
chr1 (116-234)||(24542980-24543098)
chr1 (116-234)||(24543094-24543212)
chr1 (116-234)||(24543208-24543326)
chr1 (116-234)||(24543322-24543440)
chr1 (116-234)||(24543436-24543554)
chr1 (116-234)||(24543550-24543668)
chr1 (116-234)||(24543664-24543782)
chr1 (116-234)||(24543778-24543896)
chr1 (116-234)||(24543892-24544010)
chr1 (116-234)||(24544006-24544124)
chr1 (116-234)||(24544120-24544238)
chr1 (116-234)||(24544234-24544352)
chr1 (116-234)||(24544348-24544466)
chr1 (116-234)||(24544462-24544580)
chr1 (116-234)||(24544576-24544694)
chr1 (116-234)||(46224618-46224736)
chr1 (116-233)||(24542639-24542756)
chr1 (101-234)||(24790488-24790620)
chr1 (101-234)||(45836897-45837029)
chr1 (116-224)||(29170123-29170231)
chr1 (101-233)||(40428754-40428885)
chr1 (116-224)||(42372151-42372259)
chr1 (116-234)||(17285151-17285270)
chr1 (101-224)||(32540575-32540698)
chr1 (116-234)||(919568-919686)
chr1 (116-234)||(9042277-9042395)
chr1 (101-234)||(8086283-8086415)
chr1 (101-234)||(9246872-9247005)
chr1 (101-234)||(17285266-17285398)
chr1 (101-234)||(33012029-33012161)
chr1 (116-234)||(24790616-24790735)
chr1 (116-234)||(42372038-42372155)
chr1 (101-234)||(8530136-8530268)
chr1 (101-234)||(16692921-16693053)
chr1 (101-234)||(44317620-44317752)
chr1 (116-233)||(8530264-8530387)
chr1 (116-234)||(25299060-25299177)
chr1 (101-234)||(24544690-24544822)
chr1 (143-224)||(37343082-37343163)
chr1 (101-234)||(48708389-48708521)
chr1 (102-234)||(919682-919813)
chr1 (102-234)||(21852055-21852187)
chr1 (102-234)||(44052431-44052562)
chr1 (116-233)||(49001454-49001572)
chr1 (103-234)||(37125748-37125878)
chr1 (101-234)||(29981679-29981811)
chr1 (101-233)||(6849806-6849937)
chr1 (101-233)||(46224733-46224864)
chr1 (116-234)||(6849934-6850052)
chr1 (101-234)||(29169995-29170127)
chr1 (102-224)||(23177396-23177517)
chr1 (124-234)||(40567042-40567151)
chr1 (168-233)||(25030372-25030437)
chr1 (101-234)||(47561780-47561912)
chr1 (102-224)||(46601056-46601178)
chr1 (162-234)||(9042391-9042462)
chr1 (113-205)||(42225367-42225459)
chr1 (116-148)||(44317748-44317780)
chr1 (101-149)||(45807065-45807113)
[»] scaffold0978 (2 HSPs)
scaffold0978 (120-233)||(1289-1402)
scaffold0978 (101-224)||(1157-1279)
[»] chr2 (57 HSPs)
chr2 (101-234)||(43471426-43471559)
chr2 (116-234)||(2249762-2249880)
chr2 (116-234)||(6749865-6749983)
chr2 (102-234)||(11935348-11935480)
chr2 (123-234)||(38527361-38527472)
chr2 (116-234)||(13615822-13615940)
chr2 (116-234)||(31392727-31392845)
chr2 (116-234)||(36436041-36436159)
chr2 (116-233)||(26293341-26293458)
chr2 (116-224)||(16194433-16194541)
chr2 (116-224)||(23869844-23869952)
chr2 (116-234)||(11764975-11765093)
chr2 (116-234)||(42016684-42016802)
chr2 (116-234)||(44545588-44545706)
chr2 (101-234)||(26293213-26293345)
chr2 (116-224)||(28745362-28745470)
chr2 (116-234)||(26860521-26860639)
chr2 (116-234)||(34983457-34983575)
chr2 (121-234)||(7366337-7366450)
chr2 (116-233)||(11935235-11935352)
chr2 (101-234)||(23869716-23869848)
chr2 (101-224)||(7366204-7366326)
chr2 (101-224)||(22674722-22674845)
chr2 (116-234)||(1020927-1021045)
chr2 (116-234)||(1021041-1021158)
chr2 (116-234)||(1115011-1115128)
chr2 (116-234)||(12995147-12995265)
chr2 (116-233)||(1114898-1115015)
chr2 (102-234)||(34983330-34983461)
chr2 (101-234)||(11764847-11764979)
chr2 (101-234)||(13615936-13616068)
chr2 (101-234)||(31643583-31643716)
chr2 (101-233)||(32099984-32100121)
chr2 (101-234)||(36436155-36436287)
chr2 (101-234)||(38763767-38763899)
chr2 (101-234)||(44545702-44545834)
chr2 (101-233)||(3836313-3836445)
chr2 (116-234)||(2249649-2249766)
chr2 (116-182)||(38763895-38763961)
chr2 (101-234)||(16194305-16194437)
chr2 (101-234)||(28745466-28745597)
chr2 (101-234)||(34494448-34494580)
chr2 (101-234)||(41699237-41699367)
chr2 (116-234)||(26860635-26860752)
chr2 (101-234)||(12995019-12995151)
chr2 (101-234)||(38527227-38527359)
chr2 (101-234)||(42016556-42016688)
chr2 (116-224)||(3836210-3836316)
chr2 (103-195)||(17526037-17526129)
chr2 (101-234)||(31392600-31392731)
chr2 (121-234)||(19283903-19284015)
chr2 (101-234)||(29141903-29142036)
chr2 (110-233)||(29035373-29035496)
chr2 (121-234)||(2077563-2077676)
chr2 (102-234)||(6749979-6750110)
chr2 (101-148)||(8263278-8263325)
chr2 (101-148)||(11482971-11483018)
[»] chr5 (48 HSPs)
chr5 (116-234)||(16823312-16823430)
chr5 (101-224)||(8074221-8074343)
chr5 (116-234)||(7440339-7440457)
chr5 (116-234)||(30773060-30773178)
chr5 (116-234)||(43348815-43348933)
chr5 (116-224)||(3631440-3631548)
chr5 (116-224)||(32304521-32304629)
chr5 (116-234)||(25701280-25701397)
chr5 (116-234)||(26525088-26525206)
chr5 (101-234)||(19577152-19577285)
chr5 (116-237)||(26296977-26297098)
chr5 (101-224)||(41817506-41817629)
chr5 (116-234)||(43358591-43358709)
chr5 (121-234)||(8074097-8074210)
chr5 (101-234)||(9737679-9737811)
chr5 (101-234)||(41084553-41084686)
chr5 (116-234)||(13013113-13013231)
chr5 (101-234)||(43348687-43348819)
chr5 (101-224)||(15374168-15374290)
chr5 (101-224)||(20487025-20487148)
chr5 (116-239)||(26785011-26785134)
chr5 (116-234)||(10925690-10925808)
chr5 (116-234)||(13084501-13084619)
chr5 (100-234)||(43358462-43358595)
chr5 (101-234)||(3631312-3631444)
chr5 (116-233)||(9596025-9596142)
chr5 (101-234)||(26525202-26525334)
chr5 (101-233)||(16823184-16823315)
chr5 (101-224)||(7440463-7440585)
chr5 (116-234)||(20656829-20656947)
chr5 (116-234)||(41084440-41084557)
chr5 (103-224)||(22578916-22579037)
chr5 (101-234)||(25701393-25701525)
chr5 (101-233)||(29390322-29390453)
chr5 (101-233)||(30772932-30773063)
chr5 (116-233)||(26296868-26296984)
chr5 (101-233)||(9596139-9596270)
chr5 (101-213)||(37042546-37042658)
chr5 (101-224)||(30050074-30050196)
chr5 (101-234)||(28662170-28662303)
chr5 (101-234)||(32304625-32304757)
chr5 (101-233)||(10925562-10925693)
chr5 (136-234)||(15374301-15374399)
chr5 (101-224)||(5844159-5844281)
chr5 (158-234)||(15374450-15374526)
chr5 (101-180)||(13013280-13013359)
chr5 (101-234)||(13084615-13084747)
chr5 (102-210)||(20071209-20071317)
[»] chr4 (69 HSPs)
chr4 (116-234)||(41832558-41832676)
chr4 (116-233)||(13233411-13233528)
chr4 (116-233)||(13612952-13613069)
chr4 (116-224)||(18491368-18491476)
chr4 (116-234)||(31664026-31664144)
chr4 (116-234)||(44134674-44134792)
chr4 (117-234)||(40228289-40228406)
chr4 (101-234)||(50767087-50767220)
chr4 (117-233)||(44745450-44745566)
chr4 (116-234)||(12700427-12700545)
chr4 (116-234)||(16925287-16925405)
chr4 (116-234)||(38141416-38141534)
chr4 (120-234)||(43564603-43564717)
chr4 (101-234)||(11650939-11651071)
chr4 (101-234)||(54795701-54795834)
chr4 (116-234)||(11650825-11650943)
chr4 (101-226)||(18491240-18491364)
chr4 (101-234)||(36954983-36955115)
chr4 (116-224)||(36954879-36954987)
chr4 (101-224)||(36801843-36801966)
chr4 (116-234)||(6756010-6756127)
chr4 (116-234)||(36584604-36584722)
chr4 (116-234)||(54795588-54795705)
chr4 (117-234)||(13869211-13869328)
chr4 (120-233)||(27270425-27270538)
chr4 (101-234)||(41832429-41832562)
chr4 (120-224)||(4632687-4632791)
chr4 (101-224)||(45670013-45670135)
chr4 (116-234)||(2654769-2654887)
chr4 (116-234)||(27270535-27270652)
chr4 (116-222)||(31581621-31581727)
chr4 (116-234)||(36584491-36584608)
chr4 (120-234)||(51001548-51001661)
chr4 (101-234)||(38141530-38141662)
chr4 (116-224)||(22647292-22647400)
chr4 (101-224)||(44745573-44745695)
chr4 (116-234)||(10096316-10096433)
chr4 (116-222)||(19653516-19653621)
chr4 (116-234)||(50767216-50767333)
chr4 (101-234)||(6755882-6756014)
chr4 (101-234)||(10096429-10096561)
chr4 (101-234)||(13233283-13233415)
chr4 (101-234)||(13613065-13613197)
chr4 (101-234)||(16925159-16925291)
chr4 (115-234)||(4632563-4632682)
chr4 (101-224)||(40228413-40228535)
chr4 (121-222)||(10393896-10393997)
chr4 (101-234)||(13857666-13857798)
chr4 (101-234)||(44134547-44134678)
chr4 (102-218)||(7638745-7638861)
chr4 (102-234)||(12700541-12700672)
chr4 (123-234)||(52581644-52581756)
chr4 (125-234)||(31664140-31664248)
chr4 (101-234)||(18735233-18735370)
chr4 (101-221)||(44817535-44817654)
chr4 (101-224)||(43564471-43564593)
chr4 (101-234)||(22647164-22647296)
chr4 (116-234)||(31581723-31581840)
chr4 (101-218)||(133404-133521)
chr4 (101-234)||(2654883-2655015)
chr4 (116-205)||(44817438-44817527)
chr4 (101-234)||(18668982-18669119)
chr4 (101-234)||(18707730-18707867)
chr4 (101-181)||(19653669-19653749)
chr4 (101-224)||(52581509-52581631)
chr4 (125-234)||(26653108-26653217)
chr4 (101-153)||(9046134-9046186)
chr4 (101-181)||(5734113-5734193)
chr4 (102-146)||(18714834-18714878)
[»] chr6 (38 HSPs)
chr6 (116-224)||(2660707-2660815)
chr6 (116-233)||(26468630-26468747)
chr6 (119-224)||(12698678-12698783)
chr6 (116-234)||(7021999-7022116)
chr6 (116-234)||(12996467-12996584)
chr6 (116-234)||(15469271-15469388)
chr6 (116-234)||(34127679-34127797)
chr6 (101-234)||(7021871-7022003)
chr6 (116-224)||(34023411-34023519)
chr6 (119-234)||(11450364-11450478)
chr6 (116-234)||(23258927-23259045)
chr6 (101-234)||(15469143-15469275)
chr6 (116-233)||(23258814-23258931)
chr6 (116-224)||(12698563-12698670)
chr6 (116-224)||(24130113-24130221)
chr6 (116-234)||(8560607-8560725)
chr6 (124-234)||(24130217-24130326)
chr6 (116-234)||(24635329-24635447)
chr6 (101-234)||(2660811-2660943)
chr6 (101-234)||(9079028-9079160)
chr6 (102-234)||(7536511-7536643)
chr6 (101-233)||(34023516-34023647)
chr6 (120-234)||(16461267-16461382)
chr6 (116-234)||(26468517-26468634)
chr6 (117-234)||(14883021-14883137)
chr6 (101-234)||(24635443-24635575)
chr6 (116-224)||(9078925-9079032)
chr6 (101-224)||(13405345-13405468)
chr6 (102-234)||(31968964-31969086)
chr6 (101-234)||(10290511-10290644)
chr6 (101-233)||(8560479-8560610)
chr6 (101-224)||(14883144-14883267)
chr6 (121-224)||(11450487-11450589)
chr6 (123-222)||(12996359-12996458)
chr6 (101-224)||(16461392-16461514)
chr6 (120-234)||(34127570-34127683)
chr6 (120-217)||(31489894-31489991)
chr6 (127-234)||(23259041-23259147)
[»] scaffold0014 (3 HSPs)
scaffold0014 (116-234)||(65229-65347)
scaffold0014 (116-234)||(65115-65233)
scaffold0014 (116-234)||(65002-65119)
[»] scaffold0002 (2 HSPs)
scaffold0002 (116-224)||(331953-332061)
scaffold0002 (100-233)||(331824-331956)
[»] scaffold0050 (2 HSPs)
scaffold0050 (101-233)||(19099-19230)
scaffold0050 (116-234)||(19227-19345)
[»] scaffold0131 (2 HSPs)
scaffold0131 (101-233)||(11231-11362)
scaffold0131 (124-188)||(11367-11431)
[»] scaffold0041 (1 HSPs)
scaffold0041 (101-213)||(82837-82949)
[»] scaffold0003 (1 HSPs)
scaffold0003 (102-210)||(303814-303922)


Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25642938 - 25642702
Alignment:
Q  1 ttcatcaaacccacggtgggagggtaccaaatgacatccaaatcttgcaaaaggctaaaaggcctgctattttaggcagtgaccaagccctgaccatccg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||  |||||||||||||||    
T  25642938 ttcatcaaacccacggtgggagggtaccaaatgacatccaaatcttgcaaagggctcaaatgcctgctattttaggcagtgacggagccctgaccatccg 25642839  T
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  25642838 aaaaaattaacgaccataggtctattttgcgagattttatataattttgtgtcggttttaggttttggttgatccaaattctcgcaaagtggtgaagtgg 25642739  T
Q  201 tccacccgaaaaatttaaataatttagttataggcct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  25642738 tccacccgaaaaatttaaataatttagttataggcct 25642702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25383247 - 25383008
Alignment:
Q  1 ttcatcaaacccacggtgggagggtaccaaatgacatccaaatcttgcaaaaggctaaaaggcctgctat----tttaggcagtgaccaagccctgacca 96  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||| ||    ||||||||||| |  || ||||||||    
T  25383247 ttcaacaaacccacggtgggagggtaccaaatgacctccaaatcctgcaaagggctcaaaggcctgcgatgagctttaggcagtggcggagtcctgacca 25383148  T
Q  97 tccgaaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaa 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| || ||||||||| |||||||||||||||||||||||||||||    
T  25383147 tccgaaaaaattaacgactataggtctattttgcgagattttatata-ttttgtgtcggttttaggttttagttgatccaaattctcgcaaagtggtgaa 25383049  T
Q  197 gtggtccacccgaaaaatttaaataatttagttataggcct 237  Q
    || | ||| ||||||||||||||||||||||||||||||||    
T  25383048 gtagcccatccgaaaaatttaaataatttagttataggcct 25383008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 5590151 - 5590034
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  5590151 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 5590052  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  5590051 taaataattcaattatag 5590034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 7242609 - 7242495
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  7242609 gtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatttaaa 7242510  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  7242509 taattcaattatagg 7242495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 36060539 - 36060657
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  36060539 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 36060638  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  36060639 taaataattcaattatagg 36060657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 7413085 - 7413218
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||| || |||||||||| ||||||||||||| |||||||||||| |||||    
T  7413085 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgtcggttttaggttttgattgatccaaattcccgcaaagtggtgtagtgg 7413184  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  7413185 cccacccaaaaaatttaaataattcaattatagg 7413218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 3886758 - 3886640
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||||| ||||| | ||  ||||||||||||||    
T  3886758 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatcccaattcccgcaaattggtgtactgacccacccgaaaaatt 3886659  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||||| |||||||    
T  3886658 taaataatttaattatagg 3886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 7012519 - 7012637
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  7012519 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcagttgatccaaattcccgcaaattggagtagtggtccacccgaaaaatt 7012618  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  7012619 taaataattcaattatagg 7012637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 2317243 - 2317360
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||| ||||| |||||| |||||||||||||    
T  2317243 ataggtctattttgcgatattttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaaattggtgtagtggttcacccgaaaaatt 2317342  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| ||||||||    
T  2317343 taaataattcagttatag 2317360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 28565066 - 28565174
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  28565066 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 28565165  T
Q  216 taaataatt 224  Q
    |||||||||    
T  28565166 taaataatt 28565174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 28572689 - 28572797
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  28572689 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 28572788  T
Q  216 taaataatt 224  Q
    |||||||||    
T  28572789 taaataatt 28572797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 21435021 - 21435139
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| |||||| |||| ||    
T  21435021 ataggtctattttgctagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccaaaaagtt 21435120  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  21435121 taaataattcaattatagg 21435139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 22658324 - 22658206
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||||| | |||| ||||| ||||| ||||||||||||||    
T  22658324 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatcccaattcccacaaattggtgtagtggcccacccgaaaaatt 22658225  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  22658224 taaataattcaattatagg 22658206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 43117531 - 43117649
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||  ||||| ||||  ||||| ||||||||||||||    
T  43117531 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcctgcaaattggtttagtggcccacccgaaaaatt 43117630  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  43117631 taaataattcaattatagg 43117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 1184004 - 1184121
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||| |||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| ||||||||||    
T  1184004 ataggtctaatttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccatccgaaaaatt 1184103  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  1184104 taaataattcaattatag 1184121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 36108822 - 36108955
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||| || || | || |||||||| || |||||||||||| |||||||||||| |||||    
T  36108822 aaaaaattaacgaccataggtctattttgcaagattctatacaatgttgtgacggttttaggtttgggctgatccaaattcccgcaaagtggtgtagtgg 36108921  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||||||||||||||||||| | |||||||    
T  36108922 cccatccgaaaaatttaaataattcaattatagg 36108955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 41838060 - 41837928
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  41838060 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcatgcaaagtggtgtagtgg 41837961  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  41837960 tccacccg-aaaatttaaataattcaattatagg 41837928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 41169880 - 41169987
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||| |||||||||||| ||||| |||| || ||||||    
T  41169880 ataggtctattttgcgagattttatataattttatgtcggttctaggttttggttaatccaaattcccgcaaagtggtgtagtggcccactcg-aaaatt 41169978  T
Q  216 taaataatt 224  Q
    |||||||||    
T  41169979 taaataatt 41169987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 42556071 - 42555963
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||  ||||| ||||| ||||||||||||||    
T  42556071 ataggtctattttgcgagattttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaatttggtgtagtggcccacccgaaaaatt 42555972  T
Q  216 taaataatt 224  Q
    |||||||||    
T  42555971 taaataatt 42555963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 1098239 - 1098357
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||||||||||   ||||| ||||| ||||||||| ||||||||||    
T  1098239 ataggtctattttgtgagattttatacaaatttatgtcagttttaggtttcggttgatccaaatttctgcaaattggtgtagtggtccaaccgaaaaatt 1098338  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  1098339 taaataattcaattatagg 1098357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 28564953 - 28565070
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| ||||||| ||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  28564953 ataggtctattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatccaaattcttgcaaagtggtgtagtggcccacccg-aaaatt 28565051  T
Q  216 taaataatttagttatagg 234  Q
    ||||| ||| | |||||||    
T  28565052 taaatgattcaattatagg 28565070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 28572576 - 28572693
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| ||||||| ||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  28572576 ataggtctattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatccaaattcttgcaaagtggtgtagtggcccacccg-aaaatt 28572674  T
Q  216 taaataatttagttatagg 234  Q
    ||||| ||| | |||||||    
T  28572675 taaatgattcaattatagg 28572693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 41388187 - 41388305
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||| ||||||| |||||| ||||| ||| | ||||||||||||||    
T  41388187 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgattcaaattcccgcaaattggtgtagtagcccacccgaaaaatt 41388286  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  41388287 taaataattcaattatagg 41388305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 41837932 - 41837814
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  41837932 ataggtttattttgggagattttatacaattttatgtcgattttaggttttggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 41837833  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  41837832 taaataattcaattatagg 41837814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 43117417 - 43117535
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| | ||| ||| ||||||||||    
T  43117417 ataggtctattttgcgagattttatacaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtaatggcccatccgaaaaatt 43117516  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  43117517 taaataattcaattatagg 43117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 8995024 - 8995157
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||| | || || | ||||||||  |||||||||||||| ||||||| || |||||    
T  8995024 aaaaaattaacgaccataggtctattttgagagattttatacaaatttgtatcggtttaaggttttgtctgatccaaattctcacaaagtgatgtagtgg 8995123  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  8995124 cccacccaaaaaatttaaataattcaattatagg 8995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 42556199 - 42556067
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  42556199 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgcagtgg 42556100  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  42556099 cccacccg-aaaatttaaataattcaattatagg 42556067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 24797021 - 24796913
Alignment:
Q  126 tttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataattt 225  Q
    |||||||||||||||| |||||||||||  | |||||||| ||||||||||||||  |||||| ||||| |||||||||||||||||||||||||||||     
T  24797021 tttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattaccgcaaattggtgtagtggtccacccgaaaaatttaaataattc 24796922  T
Q  226 agttatagg 234  Q
    | |||||||    
T  24796921 aattatagg 24796913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 4231401 - 4231519
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||  ||| ||||||||||    
T  4231401 ataggtctattttacgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtgccccatccgaaaaatt 4231500  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  4231501 taaataattcaattatagg 4231519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 4697988 - 4698106
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||| ||| |||| |||||||||| |||||| ||||| |||||  |||||||||||||    
T  4697988 atagatctattttgcgagattttatacaattttatgtcggttttagatttcggtttatccaaattcccgcaaattggtgtagtggctcacccgaaaaatt 4698087  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  4698088 taaataattcaattatagg 4698106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 10092436 - 10092554
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| |||||||||||  | |||||||||||| ||||||||||| |||||| ||||  ||||| ||| ||||||||||    
T  10092436 atagatctattttgcgagattttatacaattttatgtcgattttaggttttggtagatccaaattcccgcaaattggtatagtggcccatccgaaaaatt 10092535  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  10092536 taaataattcaattatagg 10092554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 2317115 - 2317247
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| | |||    
T  2317115 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgttggttttatgttttggttgatccaaattcatgcaaagtggtgtaatgg 2317214  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  2317215 cccacccg-aaaatttaaataattcaattatagg 2317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 11635827 - 11635946
Alignment:
Q  115 cataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaat 214  Q
    |||||||||||||||||| ||||||||||||||| |||| || |||||||| |  |||||||||||  |||||||||||  ||||  |||||||||||||    
T  11635827 cataggtctattttgcgaaattttatataattttgtgtcggttttaggtttcgactgatccaaatttccgcaaagtggtctagtgacccacccgaaaaat 11635926  T
Q  215 ttaaataatttagttatagg 234  Q
    |||||||||| | |||||||    
T  11635927 ttaaataattcaattatagg 11635946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 3659800 - 3659682
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||| ||||||||||||||||| |||||||| || || |||||||| |||||||| |||||  |||||| ||||| |||||  |||||||||||||    
T  3659800 ataggtctgttttgcgagattttatacaattttatatcggttttaggtttcggttgatcaaaatttccgcaaattggtgtagtggctcacccgaaaaatt 3659701  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  3659700 taaataattcaattatagg 3659682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 7413214 - 7413331
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| | ||||||||| || |||||||| ||||||| ||||||| | |||||||||| ||| ||||||||||||||||    
T  7413214 ataggtctatttt-cgagattttatacatttttatgtcggttttaggtttcggttgattcaaattccctcaaagtggtgtagtagtccacccgaaaaatt 7413312  T
Q  216 taaataatttagttatagg 234  Q
    |||| |||| | |||||||    
T  7413313 taaacaattcaattatagg 7413331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 22658437 - 22658320
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| |||| || ||| |||||| |||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  22658437 ataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttgattgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 22658339  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  22658338 taaataattcaattatagg 22658320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 3886886 - 3886754
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| ||||  | ||| ||||||||||||||||||||  ||||||||||| |||||    
T  3886886 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcgattttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 3886787  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| || |||||||||||||||| | |||||||    
T  3886786 cccaacc-aaaaatttaaataattcaattatagg 3886754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 4231273 - 4231405
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||| |||||||||||  |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  4231273 aaaaaatcaacgattataggtctattttacgagattttatgcaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtgg 4231372  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  4231373 cccacccg-aaaatttaaataattcaattatagg 4231405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 5590279 - 5590147
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||||||||||||| |||||||||||  |||||| |||| || ||| ||||||||||||||||||||   |||||||||| |||||    
T  5590279 aaaaaatcaacgactataggtctatttttcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 5590180  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||  ||||||||||||||| | |||||||    
T  5590179 cccaccc-caaaatttaaataattcaattatagg 5590147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 6316945 - 6317061
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||  |||||| ||||  | ||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  6316945 ataggtctattttgtgagattttatgcaattttgtgtcgattttatgttttggttgatccaaattcttgcaaagtggtgtagtggcccacccg-aaaatt 6317043  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  6317044 taaataattcaattatag 6317061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 6317065 - 6317166
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    |||||||||||| |||||| |||||||||||  | |||||||| || |||||||||||| |||||| ||||| ||||| |||||||||||||||||||||    
T  6317065 tattttgcgagaatttatacaattttatgtcgattttaggtttcggatgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatttaaataa 6317164  T
Q  223 tt 224  Q
    ||    
T  6317165 tt 6317166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 7422154 - 7422034
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||| |||||| |||| || |||| ||| ||||||||||||||| || |||||| || ||||     
T  7422154 aaaaaatcaacgattataggtttattttgcgagattttatacaattttgtgtcggttttagatttcggttgatccaaattcccgaaaagtgatgtagtga 7422055  T
Q  201 tccacccgaaaaatttaaata 221  Q
     ||||||||||||||||||||    
T  7422054 cccacccgaaaaatttaaata 7422034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 38567311 - 38567395
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||    
T  38567311 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtgg 38567395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 3659926 - 3659796
Alignment:
Q  103 aaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtc 202  Q
    ||||| |||||  ||| |||||||||||||||||||||  |||||| ||||||  ||| ||||||||||||||||||||  ||||||||||| ||||| |    
T  3659926 aaaatcaacgattataagtctattttgcgagattttatgcaattttgtgtcaggtttacgttttggttgatccaaattcctgcaaagtggtgtagtggcc 3659827  T
Q  203 cacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||  |||||||||||||| | |||||||    
T  3659826 cacccg-gaaatttaaataattcaattatagg 3659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 24797158 - 24797028
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  ||||||||||||||| |||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||||     
T  24797158 aaaaatcaacgattataggtctattttgcaagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggc 24797059  T
Q  202 ccacccgaaaaatttaaataatttagttatag 233  Q
    |||||| |||||||||||||||| | ||||||    
T  24797058 ccaccc-aaaaatttaaataattcaattatag 24797028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 36060411 - 36060543
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||||| ||||| | ||| ||||||||||||||||||||  | ||||||||| |||||    
T  36060411 aaaaaatcaacgattataggtatattttgcgagattttatgcaattttgtgtcaattttatgttttggttgatccaaattcctggaaagtggtgtagtgg 36060510  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
      |||||| ||||||||||||||| | |||||||    
T  36060511 cacacccg-aaaatttaaataattcaattatagg 36060543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 197271 - 197379
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||   ||||| ||||| | ||| ||| || |||||||    
T  197271 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaatttctgcaaattggtgtaatggcccatccaaaaaatt 197370  T
Q  216 taaataatt 224  Q
    |||||||||    
T  197371 taaataatt 197379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 312108 - 312216
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||   ||||| ||||| | ||| ||| || |||||||    
T  312108 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaatttctgcaaattggtgtaatggcccatccaaaaaatt 312207  T
Q  216 taaataatt 224  Q
    |||||||||    
T  312208 taaataatt 312216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 7012406 - 7012523
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||| || ||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| ||||||||||||  ||||||    
T  7012406 ataggtctattttgcgatatcttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggtccaccc-taaaatt 7012504  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  7012505 taaataattcaattatagg 7012523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 41169770 - 41169884
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    ||||||||| ||| |||||| |||||||| |||| || |||||||| |||||||| |||||| |||||||||||| ||||  ||| || |||||||||||    
T  41169770 gtctattttacgatattttaaataattttgtgtcggttttaggtttaggttgatctaaattcacgcaaagtggtgtagtgacccatccaaaaaatttaaa 41169869  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  41169870 taattcaattatagg 41169884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 41388074 - 41388191
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| |||||||| |||||||||| |||||| |||| || ||| | ||||||| ||||||||||  ||||||||||| |||| |||||||| ||||||    
T  41388074 ataggtttattttgcaagattttatacaattttgtgtcggttttatgatttggtttatccaaattcctgcaaagtggtgtagtgatccacccg-aaaatt 41388172  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  41388173 taaataattcaattatagg 41388191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 1098111 - 1098243
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| ||||||| |||||||  |||||| | ||||| ||| ||||||||||||||||||||    ||||||||| |||||    
T  1098111 aaaaaatcaacgattataggtctaatttgcgatattttatgcaattttgtatcagttttatgttttggttgatccaaattcctataaagtggtgtagtgg 1098210  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  1098211 cccacccg-aaaatttaaataattcaattatagg 1098243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 21434893 - 21435025
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||| ||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  21434893 aaaaaatcaacgattataggtttattttgcgaggttttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 21434992  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| || ||||||||||||||| | |||||||    
T  21434993 cccactcg-aaaatttaaataattcaattatagg 21435025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 10092323 - 10092439
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| |||  || ||  ||||| ||||||||||||||  ||||| ||||| ||||| ||||||| ||||||    
T  10092323 ataggtctattttgcgagattttatgcaattttgtgttggttttttgttttagttgatccaaattcctgcaaaatggtgtagtggcccacccg-aaaatt 10092421  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  10092422 taaataattcaattatag 10092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 7242740 - 7242619
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||| ||||  |||||    
T  7242740 aaaaaatcaacgattataggtttattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaaatggtatagtgg 7242641  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||||||  ||||||||||||||    
T  7242640 cccacccg--aaatttaaataatt 7242619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 17836498 - 17836614
Alignment:
Q  118 aggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattta 217  Q
    |||| |||||||  |||||||||| |||||| |||| || |||||||| || |||||||| ||   |||||||| || ||||| ||| ||||||||||||    
T  17836498 aggtgtattttgtaagattttatacaattttgtgtcggttttaggtttcgggtgatccaagtttctgcaaagtgatgtagtggcccatccgaaaaattta 17836597  T
Q  218 aataatttagttatagg 234  Q
    ||||||||| |||||||    
T  17836598 aataatttaattatagg 17836614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 9830661 - 9830783
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  || ||| ||||  | ||| ||||||||||||||||||||  ||||||||||| |||||    
T  9830661 aaaaaatcaacgattataggtttattttgcgagattttatgcaactttgtgtcgattttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 9830760  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| | | |||||||||||||||    
T  9830761 cccatctg-aaaatttaaataatt 9830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 38567183 - 38567305
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||||| |||   | ||| ||||| ||||||||||||||  ||||||| ||| |||||    
T  38567183 aaaaaatcaacgattataggtatattttgcgagattttatgcaattttgtgttgattttatgtttttgttgatccaaattcctgcaaagttgtgtagtgg 38567282  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  38567283 cccacccg-aaaatttaaataatt 38567305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 1183876 - 1184008
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| ||||||||||||||||||||  |||||| | || || ||| |||||||||||| |||||||    ||||| ||| |||||    
T  1183876 aaaaaataaacgattatagatctattttgcgagattttatgcaattttgtatcggttttatgttttggttgattcaaattcctaaaaagtagtgtagtgg 1183975  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  1183976 accaccc-aaaaatttaaataattcaattatagg 1184008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 4697891 - 4697991
Alignment:
Q  132 agattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttat 231  Q
    |||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||| ||| ||||||||||||||| | ||||    
T  4697891 agattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccatccg-aaaatttaaataattcaattat 4697989  T
Q  232 ag 233  Q
    ||    
T  4697990 ag 4697991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 7422026 - 7421925
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||| |||||      ||| |||| ||| |||||| |||||||||||| |||| ||||||| |||||||    
T  7422026 ataggtctattttgcgagattttataaaattttatatcagt------tttcggttaatctaaattcccgcaaagtggtgtagtgatccaccc-aaaaatt 7421934  T
Q  216 taaataatt 224  Q
    |||| ||||    
T  7421933 taaacaatt 7421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 8996402 - 8996478
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaa 177  Q
    |||||||||| |||||||||| |||||| |||||||||||  |||||| |||| || ||| |||| |||||||||||    
T  8996402 aaaaaattaatgaccataggtttattttacgagattttatgcaattttgtgtcggttttaagtttaggttgatccaa 8996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 32018081 - 32017978
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||||||||||  ||||||||||| |||||| ||||  | |||| ||| ||||| ||||||||  | |||||||| | |||||    
T  32018081 aaaaaattaacgattataggtctattttaagagattttatacaattttgtgtcgattttagatttcggttggtccaaatttccacaaagtggcgtagtgg 32017982  T
Q  201 tcca 204  Q
    ||||    
T  32017981 tcca 32017978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 34934376 - 34934344
Alignment:
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||||||||||||||||||||| |||||||    
T  34934376 ccacccgaaaaatttaaataatttaattatagg 34934344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 34660792 - 34660919
Alignment:
Q  94 ccatccgaaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggt 193  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| || ||||||||||| ||||||||||| | ||||||||||    
T  34660792 ccatccgaaaaaattaacgatcataggtctattttacgagattttatataattttgtgtcggttttaggttttggctgatccaaatttttgcaaagtggt 34660891  T
Q  194 gaagtggtccacccgaaaaatttaaata 221  Q
    | ||||||||||||||||||||||||||    
T  34660892 gtagtggtccacccgaaaaatttaaata 34660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 50527611 - 50527503
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  50527611 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattctcgcaaattggtgtagtggtccacccgaaaaatt 50527512  T
Q  216 taaataatt 224  Q
    |||||||||    
T  50527511 taaataatt 50527503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 44254578 - 44254460
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  44254578 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 44254479  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44254478 taaataattcaattatagg 44254460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 7160396 - 7160263
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||| |||||||||| |||||| ||||| |||||    
T  7160396 aaaaaatcaacgattataggtctattttgcgagattttatgtaattttgtgtcagttttaggtttcggttaatccaaattcccgcaaattggtgtagtgg 7160297  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||||||||||||||||||| | |||||||    
T  7160296 cccacccgaaaaatttaaataattcaattatagg 7160263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 11232132 - 11232024
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  11232132 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 11232033  T
Q  216 taaataatt 224  Q
    |||||||||    
T  11232032 taaataatt 11232024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 49657189 - 49657071
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  49657189 atagatctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 49657090  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  49657089 taaataattcaattatagg 49657071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 22729401 - 22729518
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| ||||||||||    
T  22729401 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggaccaaccgaaaaatt 22729500  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  22729501 taaataattcaattatag 22729518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 25246315 - 25246207
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||||| ||||||||||||    
T  25246315 ataggtctattttgcgagattttatacaattttatgtcttttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtctacccgaaaaatt 25246216  T
Q  216 taaataatt 224  Q
    |||||||||    
T  25246215 taaataatt 25246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 16908796 - 16908678
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||| ||||||||||| || |||||||| | ||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  16908796 ataggtctattttgctagattttatacaattttatgtcggttttaggtttcgattgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 16908697  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  16908696 taaataattcaattatagg 16908678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 21259298 - 21259180
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||| |||||| ||||| | ||| ||| ||||||||||    
T  21259298 ataggtctattttgctagattttatataattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtaatggcccatccgaaaaatt 21259199  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  21259198 taaataattcaattatagg 21259180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 21259412 - 21259294
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||| |||||| ||||| | ||| ||| ||||||||||    
T  21259412 ataggtctattttgctagattttatataattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtaatggcccatccgaaaaatt 21259313  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  21259312 taaataattcaattatagg 21259294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 28952367 - 28952261
Alignment:
Q  118 aggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattta 217  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| |||||| |||||||||    
T  28952367 aggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccaaaaaattta 28952268  T
Q  218 aataatt 224  Q
    |||||||    
T  28952267 aataatt 28952261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 29126021 - 29125903
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| ||||||||||    
T  29126021 ataggtctattttgcgagattttatacgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccatccgaaaaatt 29125922  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  29125921 taaataattcaattatagg 29125903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 35083974 - 35084092
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || |||||||| ||||||||||||||| |||||| || || ||||| ||||||||||||||    
T  35083974 ataggtctattttgcgagattttatacaattttatgttggttttaggtttcggttgatccaaattcccgcaaattgatgtagtggcccacccgaaaaatt 35084073  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  35084074 taaataattcaattatagg 35084092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 13594851 - 13594743
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||| |||||| ||||| ||||| | ||||||||||||    
T  13594851 ataggtctattttgcgagattttatacaattttatgtcggttttatgtttcggttgatccaaattcccgcaaattggtgtagtggccaacccgaaaaatt 13594752  T
Q  216 taaataatt 224  Q
    |||||||||    
T  13594751 taaataatt 13594743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 31174665 - 31174542
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||| ||| ||||| ||||  |||||| |||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||||||| |||||    
T  31174665 aaaaaattatcgatcatagatctaccttgcgatattttatacaattttgtgtcggttttaggttttggttgatccaaattctagcaaagtggtgtagtgg 31174566  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
    | || |||||||||||||||||||    
T  31174565 ttcatccgaaaaatttaaataatt 31174542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 32270897 - 32270778
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtcca-cccgaaaaat 214  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||  ||||| ||||| ||||| ||| ||||||||||    
T  32270897 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcctgcaaattggtgtagtggcccaccccgaaaaat 32270798  T
Q  215 ttaaataatttagttatagg 234  Q
    |||||||||| | |||||||    
T  32270797 ttaaataattcaattatagg 32270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 1092855 - 1092737
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||| ||| || |||||||| ||||||||||||||| |||||| ||||| ||||| |||| |||||||||    
T  1092855 atagatctattttgcgagattttatacaattttacgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacgcgaaaaatt 1092756  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  1092755 taaataattcaattatagg 1092737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 11232245 - 11232128
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  11232245 ataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcttgcaaagtggtgtagtggcccacccg-aaaatt 11232147  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  11232146 taaataattcaattatagg 11232128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 12251612 - 12251481
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  |||||||||||||| |||||||||||||||||| ||||  | ||| ||||||||||||||||||||  ||||||||||| |||||     
T  12251612 aaaaatcaacgattataggtctattttgtgagattttatataattttgtgtcgattttatgttttggttgatccaaattcctgcaaagtggtgtagtggc 12251513  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| ||||||||||||||| | |||||||    
T  12251512 ccacccg-aaaatttaaataattcaattatagg 12251481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 36633668 - 36633776
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||| ||||| ||||||||||| || |||| ||| |||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  36633668 ataggtctattttgcgagatattatacaattttatgtcggttttagatttcggttgatccaaattcctgcaaattggtgtagtggtccaccagaaaaatt 36633767  T
Q  216 taaataatt 224  Q
    |||||||||    
T  36633768 taaataatt 36633776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 27742667 - 27742785
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||| |||||||||||  | |||||||| ||||||||| ||||| || ||| ||||| ||||| ||||||||||||||    
T  27742667 ataggtctattttgcaagattttatacaattttatgtcgtttttaggtttcggttgatcccaattcccgtaaattggtgtagtggcccacccgaaaaatt 27742766  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  27742767 taaataattcaattatagg 27742785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 18163771 - 18163903
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| ||| |    
T  18163771 aaaaaatcaacgattataggtctattttgcgagattttattcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtag 18163870  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  18163871 tccacccg-aaaatttaaataattcaattatagg 18163903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 52202035 - 52202166
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||| || ||| |||||||||||||||||||   ||||||||||| ||||     
T  52202035 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgtcggttttatgttttggttgatccaaatttctgcaaagtggtgtagtga 52202134  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     |||||| |||||||||||||||| | ||||||    
T  52202135 cccaccc-aaaaatttaaataattcaattatag 52202166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 45045284 - 45045395
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    ||||||||||||||||| |||||||| |||  || |||| ||| ||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||||    
T  45045284 tattttgcgagattttaaataattttttgttggttttagatttcggttgatccaaattcccgcaaactagtgtagtgatccacccgaaaaatttaaataa 45045383  T
Q  223 tttagttatagg 234  Q
    |||| |||||||    
T  45045384 tttaattatagg 45045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 22729273 - 22729405
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||||||||||||| |||||||||||  |||||| |||| || ||| ||||||||||||||||||||   |||||||||| |||||    
T  22729273 aaaaaatcaacgactataggtctatttttcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 22729372  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||  ||||||||||||||| | |||||||    
T  22729373 cccaccc-caaaatttaaataattcaattatagg 22729405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 29126149 - 29126017
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  29126149 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtgg 29126050  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||| ||||||||||||||| | |||||||    
T  29126049 cccatccg-aaaatttaaataattcaattatagg 29126017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 1092983 - 1092852
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||| |||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  | ||||||||| |||||    
T  1092983 aaaaaatcaacgactataagtctattttgcgagattttatgcaattttgtgtgggttttatgttttggttgatccaaattcctgtaaagtggtgtagtgg 1092884  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  1092883 cccacccg-aaaatttaaataattcaattatag 1092852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 45045391 - 45045498
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || |||||||| | || ||||||||||  ||||||||||| |||||||||||| |||||||    
T  45045391 ataggtctattttgcgagattttatacaattttatgttggttttaggtttcgattaatccaaattcctgcaaagtggtgtagtggtccaccc-aaaaatt 45045489  T
Q  216 taaataatt 224  Q
     ||||||||    
T  45045490 caaataatt 45045498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 49657317 - 49657186
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| |||||||||||||  || |||||||  ||||||| ||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  49657317 aaaaaatcaacgactataggtctattttttgaaattttatgcaattttacgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 49657218  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    |||||| | ||||||||||||||| | ||||||    
T  49657217 tccacctg-aaaatttaaataattcaattatag 49657186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 28952497 - 28952375
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  || ||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||| | |||||| |||| |||||    
T  28952497 aaaaaatcaacgattatgggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaatttttgcaaaggggtgtagtgg 28952398  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  28952397 cccacccg-aaaatttaaataatt 28952375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 32271006 - 32270893
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||  |||||| |||| || |||  |||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||||||    
T  32271006 gtctattttgcgagattttatgcaattttgtgtcggttttatattttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatttaaa 32270908  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  32270907 taattcaattatagg 32270893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 50527724 - 50527607
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| ||||||||| ||| ||||||    
T  50527724 atagttctattttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggtccatccg-aaaatt 50527626  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  50527625 taaataattcaattatagg 50527607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 52202163 - 52202281
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| |||||||| |||||||||||| ||||||||||| || ||||||||  |||||||| ||||| |||||| ||||| ||||| |||| | |||||||    
T  52202163 atagatctattttacgagattttatacaattttatgtcggttttaggtttcagttgatcccaattcccgcaaattggtgtagtggcccactcaaaaaatt 52202262  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  52202263 taaataattcaattatagg 52202281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 36633540 - 36633672
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| ||||||||||| |||||| | ||  | ||| ||||||||||||||||||||  ||||||||||| || ||    
T  36633540 aaaaaatcaacgattataggtctattttgtgagattttatacaattttgtatcgattttatgttttggttgatccaaattcctgcaaagtggtgtagcgg 36633639  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  36633640 cccacccg-aaaatttaaataattcaattatagg 36633672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 44254686 - 44254574
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    ||||||||||||||||||||  |||||| |||| || ||| |||||||||||| |||||||  ||||||||||| ||||| ||||||| |||||||||||    
T  44254686 tctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgattcaaattcctgcaaagtggtgtagtggcccacccg-aaaatttaaat 44254588  T
Q  221 aatttagttatagg 234  Q
    |||| | |||||||    
T  44254587 aattcaattatagg 44254574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 12251485 - 12251377
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||| |||||| |||||||||||  | |||| ||| |||||||||||||||  ||||| ||||| | ||| |||| |||||||||    
T  12251485 ataggtctattttgcgagaatttatacaattttatgtcgattttagatttcggttgatccaaattccagcaaattggtgtaatggcccactcgaaaaatt 12251386  T
Q  216 taaataatt 224  Q
    |||||||||    
T  12251385 taaataatt 12251377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 21259539 - 21259408
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  |||||||||||||| ||||||||||  |||||| ||||  | ||| |||||||||||| |||||||  ||||||||||| |||| |    
T  21259539 aaaaatcaacgattataggtctattttgtgagattttatgcaattttgtgtcgattttatgttttggttgattcaaattcctgcaaagtggtgtagtgat 21259440  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| ||||||||||||||| | |||||||    
T  21259439 ccacccg-aaaatttaaataattcaattatagg 21259408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 49169846 - 49169968
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||| |||||||| |||||| |||| || ||| |||||||||||||| ||||   ||||||||||| | |||    
T  49169846 aaaaaatcaacgattataggtctattttgcgaaattttatacaattttgtgtcggttttatgttttggttgatccgaatttctgcaaagtggtgtaatgg 49169945  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  49169946 cccacccg-aaaatttaaataatt 49169968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 35083861 - 35083978
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||| ||||| |||||||||||  |||||| |||| || ||| ||||||||||||||||||||  | ||||||||| ||||||||||||| |||| |    
T  35083861 ataggtcaattttacgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgtaaagtggtgtagtggtccacccg-aaaagt 35083959  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  35083960 taaataattcaattatagg 35083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 13594979 - 13594847
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| ||||||||||||||||||||  |||||| |||| || ||| ||||||| |||| |||||||   |||||||||| |||||    
T  13594979 aaaaaatcaacgattatagatctattttgcgagattttatgcaattttgtgtcggttttatgttttggctgattcaaattcctacaaagtggtgtagtgg 13594880  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  13594879 cccacccg-aaaatttaaataattcaattatagg 13594847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 16908881 - 16908792
Alignment:
Q  144 attttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||||| || ||| ||||||||||||||||||||  ||||||||||| ||||| |||||| |||||||||||||||| | |||||||    
T  16908881 attttatgtcggttttatgttttggttgatccaaattccagcaaagtggtgtagtggcccaccc-aaaaatttaaataattcaattatagg 16908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 27742554 - 27742671
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||  |||||| |||| || ||| |||||||||||||||||||   ||||||||||| ||||| | | ||| ||||||    
T  27742554 ataggtctattttgagagattttatgcaattttgtgtcggttttatgttttggttgatccaaatttctgcaaagtggtgtagtggcctatccg-aaaatt 27742652  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  27742653 taaataattcaattatagg 27742671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 52571530 - 52571398
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| ||||||| |||||||  |||||| | || || ||| ||||||||||||||||||||   |||||||||| |||||    
T  52571530 aaaaaatcaacgattataggtctaatttgcgatattttatgcaattttgtatcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 52571431  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| | |||||||||||||||| | |||||||    
T  52571430 cccactc-aaaaatttaaataattcaattatagg 52571398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 44205465 - 44205588
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttta-tgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    ||||||| |||||  |||| ||||||||||||||||||||  ||||||  |||| || ||| || |||||||||||||||||| |||||||| || ||||    
T  44205465 aaaaaatcaacgattatagatctattttgcgagattttatgcaatttttgtgtcggttttatgtgttggttgatccaaattcttgcaaagtgatgtagtg 44205564  T
Q  200 gtccacccgaaaaatttaaataatt 224  Q
    |  |||||| |||||||||||||||    
T  44205565 gctcacccg-aaaatttaaataatt 44205588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 744035 - 744125
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccaccc 207  Q
    ||||||||||||||  |||||||||| ||||||| ||| || |||||||| ||||||||||||||| |||||| ||||| ||| ||||||||    
T  744035 ataggtctattttggaagattttatacaattttacgtcggt-ttaggtttcggttgatccaaattcccgcaaattggtgtagtcgtccaccc 744125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 2618938 - 2619070
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||  || |||  || ||| ||||  |||||| |||| ||  ||||||||||| |||||    
T  2618938 aaaaaattaaccaccataggtctattttgcgagattttatacaa--ttgtgttggttttaagtttctgttgattcaaactcctgcaaagtggtgtagtgg 2619035  T
Q  201 tccacccg-aaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||| |||||||||| | |||||||    
T  2619036 cccacccgaaaaaaattaaataattcaattatagg 2619070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 4618204 - 4618324
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| |||||||||| |||||||||| |||||| |||| || |||  ||||| |||||||||| |||  ||||||| || |||||    
T  4618204 aaaaaatcaacgattatagatctattttgcaagattttatacaattttgtgtcggttttattttttg-ttgatccaaactctttcaaagtg-tgtagtgg 4618301  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
    |||||||| |||||||||||||||    
T  4618302 tccacccg-aaaatttaaataatt 4618324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 52571380 - 52571292
Alignment:
Q  146 tttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| || |||| ||| ||||||||||||||  |||||| ||||| ||||||| |||| ||||||||||| |||| | |||||||    
T  52571380 tttatgtcggttttagatttcggttgatccaaatttccgcaaattggtgtagtggtctacccaaaaaatttaaacaattcaattatagg 52571292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 49169977 - 49170039
Alignment:
Q  119 ggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattc 181  Q
    |||||||||||| ||| |||||| ||||||||||| || |||||||| | |||||||||||||    
T  49169977 ggtctattttgcaagactttatacaattttatgtcggttttaggtttcgattgatccaaattc 49170039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 25894746 - 25894698
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttta 149  Q
    |||||||| ||||| |||||||||||||||||||||||| | |||||||    
T  25894746 aaaaaatttacgactataggtctattttgcgagattttaaacaatttta 25894698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 52499281 - 52499197
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccaccc 207  Q
    ||||||||||||||||||| |||||| |||  || |||  ||| || ||||| |||||  |||||||||||| ||||||||||||    
T  52499281 tattttgcgagattttatacaattttgtgttggttttaaatttcggctgatctaaatttccgcaaagtggtgtagtggtccaccc 52499197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 18657894 - 18657974
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattc 181  Q
    ||||||||||||| |||| ||||| ||||| ||| |||||| ||||||   || || |||||||| ||||||| |||||||    
T  18657894 aaaaaattaacgatcatatgtctactttgcaagactttatacaattttgcatcggttttaggtttcggttgattcaaattc 18657974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 25911713 - 25911665
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttta 149  Q
    |||||||| | ||| |||||||||||||||||||||||| | |||||||    
T  25911713 aaaaaatttatgactataggtctattttgcgagattttaaacaatttta 25911665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 25174200 - 25174333
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| | |||  || |||||||| ||||||||||||||||| |||||||||| |||||    
T  25174200 aaaaaattaacgaccgtaggtcaattttgcgagattttatataattatgtgttggttttaggtttcggttgatccaaattctcacaaagtggtgtagtgg 25174299  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||||||||||||||||||| | |||||||    
T  25174300 tccacccgaaaaatttaaataattcaattatagg 25174333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 8461752 - 8461884
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||    
T  8461752 aaaaaattaacgattataggtctattttgcgatattttatacaattttatgtctgttttaggtttcggttgatccaaattcccgcaaattggtgtagtgg 8461851  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    |||||||||||||||||||||||| | ||||||    
T  8461852 tccacccgaaaaatttaaataattcaattatag 8461884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 40055772 - 40055890
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| ||||| ||||| |||||| |||||||    
T  40055772 ataggtctattttgcgagattttatacaattttatgtcagttttaggtttcggttgatccaaattcccgcaaattggtgcagtggcccacccaaaaaatt 40055871  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  40055872 taaataattcaattatagg 40055890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 46027861 - 46027979
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  46027861 ataggtctattttgcgagattttatacaattttatgtcagttttagatttaggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 46027960  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  46027961 taaataattcaattatagg 46027979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 9624177 - 9624294
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  9624177 ataggtctattttccgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 9624276  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  9624277 taaataattcaattatag 9624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 17167048 - 17167166
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||||| |||||| || || ||||||||||||||||||||    
T  17167048 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatcccaattcccgcaaattgatgtagtggtccacccgaaaaatt 17167147  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  17167148 taaataattcaattatagg 17167166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 31065600 - 31065494
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  31065600 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgcagtggcccacccgaaaaatt 31065501  T
Q  216 taaataa 222  Q
    |||||||    
T  31065500 taaataa 31065494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 31932014 - 31931884
Alignment:
Q  103 aaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtc 202  Q
    ||||| |||||  ||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||||    
T  31932014 aaaatcaacgattataggtctattttgcgagattttatacgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtc 31931915  T
Q  203 cacccgaaaaatttaaataatttagttatag 233  Q
    ||||| |||||||||||||||| | ||||||    
T  31931914 cacccaaaaaatttaaataattcaattatag 31931884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 36358287 - 36358169
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  36358287 atagatctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 36358188  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  36358187 taaataattcaattatagg 36358169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 44142942 - 44143060
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| ||||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  44142942 ataggtctattttgcgagattttatacaattttatgtcggttttagattttgattgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 44143041  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44143042 taaataattcaattatagg 44143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 46828927 - 46828821
Alignment:
Q  115 cataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaat 214  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||| || |||||    
T  46828927 cataggtctattttgcgagattttgtacaattttatgtcggtattaggtttcggttgatccaaattcccgcaaagtggtgtagtggtccactcg-aaaat 46828829  T
Q  215 ttaaataa 222  Q
    ||||||||    
T  46828828 ttaaataa 46828821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 36675464 - 36675346
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||| | |||| ||||| ||||| ||||||||||||||    
T  36675464 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaattcccacaaattggtgtagtggcccacccgaaaaatt 36675365  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  36675364 taaataattcaattatagg 36675346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 44724040 - 44723922
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| | |||| ||||| ||||| ||| ||||| ||||    
T  44724040 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccacaaattggtgtagtggcccatccgaagaatt 44723941  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||||| |||||||    
T  44723940 taaataatttaattatagg 44723922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 29075290 - 29075158
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||||||||||||||||| |||||||  |||||| |||| || ||| ||||||||||||||||||||| ||||||||||| |||||    
T  29075290 aaaaaatcaacgactataggtctattttgcgatattttatgcaattttgtgtcggttttatgttttggttgatccaaattcttgcaaagtggtgtagtgg 29075191  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  29075190 cccacccg-aaaatttaaataattcaattatagg 29075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 46027733 - 46027865
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||| ||||||||||| |||||    
T  46027733 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcttgcaaagtggtgtagtgg 46027832  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  46027833 cccacccg-aaaatttaaataattaaattatagg 46027865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 26873884 - 26873992
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||| |||||||| ||||||| |||||||||||||| |||| ||| | ||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  26873884 ataggtctaatttgcgaggttttatacaattttatgtcagttttagatttcgattgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 26873983  T
Q  216 taaataatt 224  Q
    |||||||||    
T  26873984 taaataatt 26873992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 22723753 - 22723635
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||| ||| |||||| ||||| ||||| ||||||| ||||||    
T  22723753 ataggtctattttgcgagattttatacaattttatgtcggttttagatttcggttgatccaatttcccgcaaattggtgtagtggcccacccgcaaaatt 22723654  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  22723653 taaataattcaattatagg 22723635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 26873771 - 26873888
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  26873771 ataggtctattttgcgagattttatacaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 26873869  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  26873870 taaataattcaattatagg 26873888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 43859272 - 43859390
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||||||||   ||||| ||||| ||||||||||||||||||||    
T  43859272 ataggtctattttgtgagattttatacaattttacgtcggttttaggtttcggttgatccaaatttctgcaaattggtgtagtggtccacccgaaaaatt 43859371  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  43859372 taaataattcaattatagg 43859390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 41367840 - 41367957
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||||||| || ||||||||| |||||||||||||  |||||| ||||| |||| |||||||||||||||    
T  41367840 ataggtctattttgtgagattttatacaaatttatgtcggttttaggttttagttgatccaaatttccgcaaattggtgtagtgatccacccgaaaaatt 41367939  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  41367940 taaataattcaattatag 41367957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 44467998 - 44467881
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || ||||||||   ||||||||||||| |||||| ||||| ||||||||||| ||||||||    
T  44467998 ataggtctattttgcgagattttatacaattttatgttggttttaggtttcaattgatccaaattcccgcaaattggtgtagtggtccacctgaaaaatt 44467899  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  44467898 taaataattcaattatag 44467881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 31428790 - 31428921
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||  |||||| |||| || ||| |||||| |||||||||||||  ||||||||||| |||||    
T  31428790 aaaaaatcaacgattataggtctattttgcaagattttatgcaattttgtgtcggttttatgttttgattgatccaaattcctgcaaagtggtgtagtgg 31428889  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    |||||||| ||||||||||||||||| ||||||    
T  31428890 tccacccg-aaaatttaaataatttaattatag 31428921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 45350232 - 45350340
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||| ||||||| |||||| ||||| ||||  ||||||||||||||    
T  45350232 ataggtctattttgcgagattttatacaattttatgtcgattttaggtttcggttgattcaaattcccgcaaattggtgtagtgtcccacccgaaaaatt 45350331  T
Q  216 taaataatt 224  Q
    |||||||||    
T  45350332 taaataatt 45350340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 23469373 - 23469255
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||| ||||| |||||| ||||| ||||| ||| | ||||||||    
T  23469373 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttctgttgatcccaattcccgcaaattggtgtagtggcccatctgaaaaatt 23469274  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  23469273 taaataattcaattatagg 23469255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 22723881 - 22723749
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  22723881 aaaaaatcaacgattataggtctactttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 22723782  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  22723781 cccacccg-aaaatttaaataattcaattatagg 22723749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 23562752 - 23562620
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| ||||||||||||||||||||| |||||| |||| | |||| |||||| ||||||||||||  |||||||||||| ||| |    
T  23562752 aaaaaatcaacgattatagatctattttgcgagattttatacaattttgtgtc-gaattaagttttgattgatccaaatttccgcaaagtggtgtagtag 23562654  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||||||||||||||| |||| | |||||||    
T  23562653 tccacccgaaaaatttaaacaattcaattatagg 23562620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 42241906 - 42241789
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| |||||||| |||||||||||| ||||||||||| || |||| ||| ||||||||||||||| || ||| ||||| ||| ||||||||||||||||    
T  42241906 atagatctattttacgagattttatacaattttatgtcggttttagatttcggttgatccaaattcccggaaattggtgtagtcgtccacccgaaaaatt 42241807  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  42241806 taaataattcaattatag 42241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 17166934 - 17167052
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| ||||| |||||| |||||||    
T  17166934 atagttctattttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccacccaaaaaatt 17167033  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  17167034 taaataattcaattatagg 17167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 28754860 - 28754981
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||||||||| |||| ||||| |||||||||||||||| |||||||||||| | ||||||||  ||||||||||||| | |||| |||||| |||||     
T  28754860 aaaaattaacgatcatatgtctactttgcgagattttatacaattttatgtcaattttaggtttcagttgatccaaatt-ttgcaaggtggtgtagtggc 28754958  T
Q  202 ccacccgaaaaatttaaataatt 224  Q
    |||||| ||||| ||||||||||    
T  28754959 ccacccaaaaaaattaaataatt 28754981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 31065713 - 31065596
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||  |||||| |||| || ||| ||||||||| ||||||||||  ||||||||||| ||||||||||||| ||||||    
T  31065713 ataggtctattttacgagattttatgcaattttgtgtcggttttatgttttggttaatccaaattcctgcaaagtggtgtagtggtccacccg-aaaatt 31065615  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  31065614 taaataattcaattatagg 31065596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 31428918 - 31429036
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || ||||||||  |||||||  ||||| || ||| ||||| |||||||||||||||||||     
T  31428918 atagatctattttgcgagattttataaaattttatgtcggttttaggtttcagttgatctcaattcccgtaaattggtgtagtggtccacccgaaaaatg 31429017  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  31429018 taaataattcaattatagg 31429036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 44468126 - 44467994
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| ||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  44468126 aaaaaatcaacgattatagatctattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 44468027  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  44468026 cccacccg-aaaatttaaataattcaattatagg 44467994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 36358415 - 36358284
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| |||||||||||| |||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  36358415 aaaaaatcaacgattatagatctattttgcgacattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 36358316  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    ||||||| |||||||||||||||| | ||||||    
T  36358315 tccaccc-aaaaatttaaataattcaattatag 36358284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 18104423 - 18104301
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||| ||  |||||| |||| || | | |||||||||||||||||||| |||||| ||||| |||||    
T  18104423 aaaaaatcaacgattataggtctattttgcgagattt-atgcaattttgtgtcggtttcatgttttggttgatccaaattcccgcaaattggtgtagtgg 18104325  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| |||||||||||||||||||    
T  18104324 cccatccgaaaaatttaaataatt 18104301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 23469483 - 23469369
Alignment:
Q  119 ggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaa 218  Q
    ||||||||||||||||||||||  |||||| |||| || |||  |||||||||||||||||||  ||||||||||| ||| ||||||||| |||||||||    
T  23469483 ggtctattttgcgagattttatgcaattttgtgtcggttttatattttggttgatccaaattcctgcaaagtggtgtagttgtccacccg-aaaatttaa 23469385  T
Q  219 ataatttagttatagg 234  Q
    |||||| | |||||||    
T  23469384 ataattcaattatagg 23469369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 9624049 - 9624181
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||  || |||  |||||||||||||||||||   ||||||||||  ||||    
T  9624049 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttggttttatattttggttgatccaaattcctacaaagtggtgttgtgg 9624148  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||||| |||||||    
T  9624149 cccaccc-aaaaatttaaataatttaattatagg 9624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 22499883 - 22499778
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||| |||||||||||||||||| |||||||  |||||||| || || |||||||| |||| ||| |||||| |||||||||||| |||||    
T  22499883 aaaaaattaacgatcataggtctattttgcgaaattttattcaattttatatcggttttaggtttcggttaatctaaattcccgcaaagtggtgtagtgg 22499784  T
Q  201 tccacc 206  Q
     |||||    
T  22499783 cccacc 22499778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 29502237 - 29502104
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||| |||||||| |||||||||  |||||| |||  || |||||||| |   ||||||||||| |||||||||||| |||||    
T  29502237 aaaaaattaacgataataggtatattttgcaagattttattcaattttgtgttggttttaggtttcgacagatccaaattcccgcaaagtggtgtagtgg 29502138  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||||||||||||||||||| | |||||||    
T  29502137 cccatccgaaaaatttaaataattgaattatagg 29502104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 36675592 - 36675460
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| ||  |||| ||||||||| ||||||||||  |||||| |||| || ||| ||||||||||||||||||||  |||||||| || |||||    
T  36675592 aaaaaattaatgattatagatctattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtgatgtagtgg 36675493  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  36675492 cccacccg-aaaatttaaataattcaattatagg 36675460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 43859144 - 43859276
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||| | |||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  43859144 aaaaaatcaacgattataggtcgaatttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 43859243  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||| ||| ||||||||||||||| | |||||||    
T  43859244 tccatccg-aaaatttaaataattcaattatagg 43859276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 16834237 - 16834134
Alignment:
Q  131 gagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagtta 230  Q
    ||||||||||| ||||||||||| || |||||||| | ||||||||||||||| |||| ||| | ||||  |||||| |||||||||||||||||| |||    
T  16834237 gagattttatacaattttatgtcggttttaggtttcgattgatccaaattctcacaaattggggtagtgtcccacccaaaaaatttaaataatttaatta 16834138  T
Q  231 tagg 234  Q
    ||||    
T  16834137 tagg 16834134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 29075162 - 29075054
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| |||||||||||||          ||||| ||||||||||||||||||||    
T  29075162 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaat----------tggtgtagtggtccacccgaaaaatt 29075073  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  29075072 taaataattcaattatagg 29075054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 44724153 - 44724036
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||| ||||||||||| |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| || || ||||||| ||||||    
T  44724153 ataggtttattttgagagattttatacaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagaggcccacccg-aaaatt 44724055  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44724054 taaataattcaattatagg 44724036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 9014445 - 9014578
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  ||||||||| ||    |||||||||| |||||| |||| || |||||||| |  | ||||||||| ||||||| ||||| |||||    
T  9014445 aaaaaattaacgaagataggtctacttcttaagattttatacaattttgtgtcggttttaggtttcgactaatccaaattttcgcaaaatggtgtagtgg 9014544  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||||||||||||| |||||||| |||||||    
T  9014545 cccacccgaaaaatttatataatttaattatagg 9014578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 45350104 - 45350236
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| |||||||||||||||||||||  |||||| |||| || ||| |||||||||||||||||||   ||||||||||| | |||    
T  45350104 aaaaaatcaacgattataagtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaatttctgcaaagtggtgtaatgg 45350203  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||| ||||||||||||||| | |||||||    
T  45350204 cccatccg-aaaatttaaataattcaattatagg 45350236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 29663010 - 29663100
Alignment:
Q  144 attttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||| |||| || |||| ||| || |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||    
T  29663010 attttgtgtcggttttagatttcggctgatccaaattctcacaaagtggtgtagtggcccacccgaaaaatttaaataattcaattatagg 29663100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 39976502 - 39976620
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| || |||||||| || |||| |||   ||||||||||||   | ||| ||||| ||||||||||||||||||||    
T  39976502 atagatctattttgtgagattttatacaaatttatgtcggttttagatttcaattgatccaaatttctgtaaattggtgtagtggtccacccgaaaaatt 39976601  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  39976602 taaataattcaattatagg 39976620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 16834382 - 16834250
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| |||||||  | |||||||  |||||| ||||||| ||| |||||||||||||||||||   ||||||||||| |||||    
T  16834382 aaaaaatcaacgattataggtttattttgtaaaattttatgcaattttgtgtcagttttatgttttggttgatccaaatttctgcaaagtggtgtagtgg 16834283  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||| ||||||||||||||| | |||||||    
T  16834282 cccatccg-aaaatttaaataattcaattatagg 16834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 30781064 - 30781196
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||| ||||| |||| ||||| | |||||||| |||||| |||  || || ||||| |||| |||||||||  || ||||||||| | |||    
T  30781064 aaaaaattaacgatcatagatctactttgcaaaattttatacaattttgtgtaggtttt-ggtttcggttaatccaaatttccgtaaagtggtgcaatgg 30781162  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| |||||||||||||||| | |||||||    
T  30781163 tccacccaaaaaatttaaataattcaattatagg 30781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 39976374 - 39976505
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| ||||| |||||||||||||||  |||||| | || || ||| ||||||||||||||||||||   |||||||||| ||||     
T  39976374 aaaaaatcaacgattatatgtctaatttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctacaaagtggtgtagtga 39976473  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  39976474 cccacccg-aaaatttaaataattcaattatag 39976505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 42242034 - 42241903
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| || |||| ||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||     
T  42242034 aaaaaatcaacgattataggtttaatttgtgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtga 42241935  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
      |||||| ||||||||||||||| | ||||||    
T  42241934 ctcacccg-aaaatttaaataattcaattatag 42241903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 41367727 - 41367844
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||| |||||||||||||||  |||||| | ||  | |||  ||||||||||||||||||    |||||||||| ||||||||| ||| ||||||    
T  41367727 ataggtctaatttgcgagattttatgcaattttgtatcgattttatattttggttgatccaaatttctacaaagtggtgtagtggtccatccg-aaaatt 41367825  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| |||||||||    
T  41367826 taaataattcagttatagg 41367844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 16649701 - 16649569
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| || | ||||| |||||||||| |||||||| |||||| | |   | |||||||| || |||||||||||| |||||||||||| || ||    
T  16649701 aaaaaattaatgatcttaggtttattttgcgaaattttatacaattttgtattgattttaggtttcggctgatccaaattcccgcaaagtggtgtagcgg 16649602  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    | |||||  ||||||||||||||| | |||||||    
T  16649601 tgcaccc-caaaatttaaataattcaattatagg 16649569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 17624062 - 17623930
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| || | ||||| |||||||||| |||||||| |||||| | |   | |||||||| || |||||||||||| |||||||||||| || ||    
T  17624062 aaaaaattaatgatcttaggtttattttgcgaaattttatacaattttgtattgattttaggtttcggctgatccaaattcccgcaaagtggtgtagcgg 17623963  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    | |||||  ||||||||||||||| | |||||||    
T  17623962 tgcaccc-caaaatttaaataattcaattatagg 17623930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 40883335 - 40883447
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||| ||||||||| ||||||||||| |||||||||||||| | |||| |||| || |||| ||| ||  |||||||||   | |||||||| | |||||    
T  40883335 aaaagattaacgactataggtctattatgcgagattttatacacttttgtgtcggttttagttttcggcagatccaaatctccccaaagtggcgtagtgg 40883434  T
Q  201 tccacccgaaaaa 213  Q
    |||||||||||||    
T  40883435 tccacccgaaaaa 40883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 4249083 - 4248984
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    |||||||| |||||||||||||||||||| | || ||||||||  |   ||||||||||| | ||||||||| || ||| || |||||||||||||||||    
T  4249083 tattttgcaagattttatataattttatgccggttttaggtttcagcaaatccaaattcttggaaagtggtgtagaggttcatccgaaaaatttaaataa 4248984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 40055666 - 40055776
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    ||||||||||||||||||  |||||| | || ||  || ||||||||||||||||||||| |  |||||||| ||||| ||| ||| |||||||||||||    
T  40055666 tattttgcgagattttatgcaattttgtatcggttgtatgttttggttgatccaaattcttgataagtggtgtagtggcccatccg-aaaatttaaataa 40055764  T
Q  223 tttagttatagg 234  Q
    || | |||||||    
T  40055765 ttcaattatagg 40055776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 44142815 - 44142946
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||||| |||  || ||| |||||  |||||||||||||  ||||||||||| |||||    
T  44142815 aaaaaatcaacgattataggtatattttgcgagattttatgcaattttgtgttggttttatgttttctttgatccaaattcctgcaaagtggtgtagtgg 44142914  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||| |  |||||||||||||| | |||||||    
T  44142915 -ccacctg-gaaatttaaataattcaattatagg 44142946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 14629726 - 14629632
Alignment:
Q  125 ttttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    ||||||||||||||| | || ||| || |  | |||| ||||||| ||||||||| |  ||||||||||| |||||||||||||||||| |||||    
T  14629726 ttttgcgagattttaaaaaaatttgtgactattttagtttttggtagatccaaatccctgcaaagtggtgtagtggtccacccgaaaaaattaaa 14629632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 24779680 - 24779614
Alignment:
Q  167 ggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatag 233  Q
    ||||||| ||||||| || ||||||||  | ||||||||||||||||||||||||||| | ||||||    
T  24779680 ggttgattcaaattcacgtaaagtggtctaatggtccacccgaaaaatttaaataattaaattatag 24779614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 9013869 - 9014001
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||| | |||||||||||||    ||||||||||  ||||| |||| || |||||||| | ||||||| |||| || |||| || || | |||    
T  9013869 aaaaaattaacaatcataggtctatttcttaagattttatacgattttgtgtcggttttaggtttggattgatccgaatt-tcccaaaatgttgtaatgg 9013967  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| |||||||||||| |||||||| |||||||    
T  9013968 cccatccgaaaaatttatataatttaattatagg 9014001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 22566667 - 22566606
Alignment:
Q  119 ggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaatt 180  Q
    ||||||||||||||||||||||| |||||| |||| || ||| |||| || |||||||||||    
T  22566667 ggtctattttgcgagattttatacaattttgtgtcggttttaagtttcggctgatccaaatt 22566606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 4248954 - 4248890
Alignment:
Q  170 tgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||| ||||| | ||||||||||| ||||| || |||||||||||||||||||| | |||||||    
T  4248954 tgatctaaatttttgcaaagtggtgtagtggcccgcccgaaaaatttaaataattcaattatagg 4248890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 8727775 - 8727898
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||| ||||||||||| ||||||||| | ||||||||| | ||||| |||   | ||| |||| || |||||||||||||  |||||||||  |||||    
T  8727775 aaaaaactaacgaccatatgtctattttacaagattttatgtcattttgtgttgattttatgtttcggctgatccaaattcttacaaagtggtatagtgg 8727874  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||  | ||||||||||| ||||    
T  8727875 cccatgcaaaaaatttaaacaatt 8727898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 29662987 - 29663015
Alignment:
Q  101 aaaaaattaacgaccataggtctattttg 129  Q
    |||||||||||||||||||||||||||||    
T  29662987 aaaaaattaacgaccataggtctattttg 29663015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 40567147 - 40567265
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  40567147 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 40567246  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  40567247 taaataattcaattatagg 40567265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 44052435 - 44052317
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||    
T  44052435 ataggtctattttgtgagattttatagaattttatgtcggttttaggttttggttgattcaaattctcgcaaattggtgtagtggcccacccgaaaaatt 44052336  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44052335 taaataattcaattatagg 44052317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 47561908 - 47562026
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  47561908 ataggtctattttgcgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 47562007  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  47562008 taaataattcaattatagg 47562026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 45837025 - 45837143
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| |||||||  ||||| ||||| ||||||||||||||||||||    
T  45837025 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgattcaaattcctgcaaattggtgtagtggtccacccgaaaaatt 45837124  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  45837125 taaataattcaattatagg 45837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 48708393 - 48708275
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||   |||||||||||||    
T  48708393 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtgtctcacccgaaaaatt 48708294  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  48708293 taaataattcaattatagg 48708275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 51139739 - 51139871
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||| || ||| ||||||||||||||||||||| ||||||||||| |||||    
T  51139739 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgtcggttttatgttttggttgatccaaattcttgcaaagtggtgtagtgg 51139838  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  51139839 cccacccg-aaaatttaaataattcaattatagg 51139871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 8086411 - 8086519
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| |||| |||||||||    
T  8086411 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacacgaaaaatt 8086510  T
Q  216 taaataatt 224  Q
    |||||||||    
T  8086511 taaataatt 8086519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 16692925 - 16692817
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  16692925 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 16692826  T
Q  216 taaataatt 224  Q
    |||||||||    
T  16692825 taaataatt 16692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 23177527 - 23177641
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||    
T  23177527 gtctattttgcgagattttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaaattggtgtagtggtccatccgaaaaatttaaa 23177626  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  23177627 taattcaattatagg 23177641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 25299064 - 25298946
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||| | ||| ||||| ||||||||||||||    
T  25299064 ataggtctattttgcgagattttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaaattagtgtagtggcccacccgaaaaatt 25298965  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  25298964 taaataattcaattatagg 25298946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 37125874 - 37125992
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||||| |||||| ||||| |||||  |||||||||||||    
T  37125874 ataggtctattttgcgagattttatacaattttatatcagttttaggtttcggttgatcaaaattcccgcaaattggtgtagtggctcacccgaaaaatt 37125973  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  37125974 taaataattcaattatagg 37125992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 29981683 - 29981575
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  29981683 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcggttgatccaaattcccgcaaattggtatagtggtccacccgaaaaatt 29981584  T
Q  216 taaataatt 224  Q
    |||| ||||    
T  29981583 taaacaatt 29981575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 33012033 - 33011925
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| ||||||||||    
T  33012033 ataggtctattttgcgagattttatgcaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccatccgaaaaatt 33011934  T
Q  216 taaataatt 224  Q
    |||||||||    
T  33011933 taaataatt 33011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 40428757 - 40428649
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  40428757 atagttctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 40428658  T
Q  216 taaataatt 224  Q
     ||||||||    
T  40428657 aaaataatt 40428649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 51139867 - 51139975
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| |||||||||||||||| || ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  51139867 ataggtttattttgcgagattttttacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 51139966  T
Q  216 taaataatt 224  Q
    |||||||||    
T  51139967 taaataatt 51139975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24542870 - 24542752
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24542870 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24542771  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24542770 taaataattcaattatagg 24542752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24542984 - 24542866
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24542984 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24542885  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24542884 taaataattcaattatagg 24542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543098 - 24542980
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543098 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24542999  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24542998 taaataattcaattatagg 24542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543212 - 24543094
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543212 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543113  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543112 taaataattcaattatagg 24543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543326 - 24543208
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543326 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543227  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543226 taaataattcaattatagg 24543208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543440 - 24543322
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543440 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543341  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543340 taaataattcaattatagg 24543322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543554 - 24543436
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543554 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543455  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543454 taaataattcaattatagg 24543436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543668 - 24543550
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543668 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543569  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543568 taaataattcaattatagg 24543550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543782 - 24543664
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543782 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543683  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543682 taaataattcaattatagg 24543664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24543896 - 24543778
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24543896 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543797  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543796 taaataattcaattatagg 24543778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544010 - 24543892
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544010 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24543911  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24543910 taaataattcaattatagg 24543892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544124 - 24544006
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544124 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544025  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544024 taaataattcaattatagg 24544006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544238 - 24544120
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544238 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544139  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544138 taaataattcaattatagg 24544120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544352 - 24544234
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544352 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544253  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544252 taaataattcaattatagg 24544234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544466 - 24544348
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544466 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544367  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544366 taaataattcaattatagg 24544348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544580 - 24544462
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544580 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544481  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544480 taaataattcaattatagg 24544462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24544694 - 24544576
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24544694 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24544595  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24544594 taaataattcaattatagg 24544576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 46224736 - 46224618
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||| ||||| ||||| ||||| ||||||||    
T  46224736 atagatctattttgcgagattttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaaattggtgtagtggcccacctgaaaaatt 46224637  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  46224636 taaataattcaattatagg 46224618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 24542756 - 24542639
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  24542756 ataggtctattttgtgaaattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 24542657  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  24542656 taaataattcaattatag 24542639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 24790488 - 24790620
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||| |||| ||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  24790488 aaaaaatcaacgactataagtctgttttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 24790587  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  24790588 tccacccg-aaaatttaaataattcaattatagg 24790620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 45836897 - 45837029
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||| ||||||||||||||| |||||| | || || ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  45836897 aaaaaatcaacgattataggtctatattgcgagattttatacaattttgtatcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtgg 45836996  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||||| |||||||    
T  45836997 tccacccg-aaaatttaaataatttaattatagg 45837029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 29170123 - 29170231
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||||||| || |||||||| ||||||||||||||  |||||| ||||| |||| |||||||||||||||    
T  29170123 ataggtctattttgtgagattttatacaaatttatgtcggttttaggtttcggttgatccaaatttccgcaaattggtgcagtgatccacccgaaaaatt 29170222  T
Q  216 taaataatt 224  Q
    |||||||||    
T  29170223 taaataatt 29170231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 40428885 - 40428754
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||| |    
T  40428885 aaaaaatcaacgactataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtag 40428786  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    ||||| || ||||||||||||||| | ||||||    
T  40428785 tccactcg-aaaatttaaataattcaattatag 40428754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 42372151 - 42372259
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || |||||||| |||||||||||||||  ||||| ||||| ||||| |||||| |||||||    
T  42372151 ataggtctattttgcgagattttatacaattttatgttggttttaggtttcggttgatccaaattcctgcaaattggtgtagtggcccacccaaaaaatt 42372250  T
Q  216 taaataatt 224  Q
    |||||||||    
T  42372251 taaataatt 42372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 17285270 - 17285151
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtcca-cccgaaaaat 214  Q
    |||||||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||||||||  |||||| ||||| ||||||||| ||||||||||    
T  17285270 ataggtctattttgtgagattttatacaattttacgtcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggtccaccccgaaaaat 17285171  T
Q  215 ttaaataatttagttatagg 234  Q
    |||||||||| | |||||||    
T  17285170 ttaaataattcaattatagg 17285151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 32540698 - 32540575
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||| |||| || |||||||| |||| ||||||||   | |||||||||| | |||    
T  32540698 aaaaaattaacgactataggtctattttacgagattttatacaattttgtgtcggttttaggtttcggtttatccaaatatccacaaagtggtgtaatgg 32540599  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||||||||||||||||||||||    
T  32540598 cccacccgaaaaatttaaataatt 32540575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 919686 - 919568
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||   |||||||||||||  ||||| ||||| ||| |||||||| |||||||    
T  919686 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttccattgatccaaattccagcaaattggtgtagtagtccacccaaaaaatt 919587  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  919586 taaataattcaattatagg 919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 9042395 - 9042277
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||| ||| || |||||||| ||||||||||||||  |||||| ||||| |||||||||||| |||||||    
T  9042395 ataggtctattttgtgagattttatacaaatttaagtcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggtccacccaaaaaatt 9042296  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  9042295 taaataattcaattatagg 9042277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 8086283 - 8086415
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| |||| |||||||||| |||||||||  ||||||||||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  8086283 aaaaaatcaacgactatagatctattttgctagattttatgcaattttatgtaggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 8086382  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  8086383 cccacccg-aaaatttaaataattcaattatagg 8086415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 9247005 - 9246872
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| ||  |||| ||||||||||||||||||||| |||||| | || || |||||||| || | |||||||||||| |||||||||| |||||    
T  9247005 aaaaaattaaggattatagatctattttgcgagattttatacaattttgtatcggttttaggtttcggcttatccaaattctcacaaagtggtgtagtgg 9246906  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| |||||||||||||||||| | |||||||    
T  9246905 cccactcgaaaaatttaaataattcaattatagg 9246872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 17285398 - 17285266
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||||| || || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  17285398 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttatatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 17285299  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  17285298 cccacccg-aaaatttaaataattcaattatagg 17285266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 33012161 - 33012029
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| ||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  33012161 aaaaaatcaacgattataggtctattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 33012062  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  33012061 cccacccg-aaaatttaaataattcaattatagg 33012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 24790616 - 24790735
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggtttt-ggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaat 214  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| ||||| |||||  ||  ||||||||    
T  24790616 ataggtctattttgcgagattttatacaattttatgtcggttttacgttttgggttgatccaaattcccgcaaattggtgtagtggctcaagcgaaaaat 24790715  T
Q  215 ttaaataatttagttatagg 234  Q
    |||||||||| | |||||||    
T  24790716 ttaaataattcaattatagg 24790735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 42372038 - 42372155
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||  |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| ||||||||||||| ||||||    
T  42372038 ataggtctattttgtgagattttatgcaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtggtccacccg-aaaatt 42372136  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  42372137 taaataattcaattatagg 42372155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 8530136 - 8530268
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| ||||  | ||| ||| ||||||||||||||||| ||||||||||| |||||    
T  8530136 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcgattttatgttctggttgatccaaattcttgcaaagtggtgtagtgg 8530235  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||| | ||||||||||||||| | |||||||    
T  8530236 cccacctg-aaaatttaaataattcaattatagg 8530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 16693053 - 16692921
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||| |||||||||||  |||||| |||| || ||| ||||||||||||||||||||   |||||||||| |||||    
T  16693053 aaaaaatcaacgattataggtctattttacgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 16692954  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  16692953 cccacccg-aaaatttaaataattcaattatagg 16692921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 44317620 - 44317752
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||||||||||| ||||||| |||   | ||| ||||||||||||| ||||||  | ||||||||| |||||    
T  44317620 aaaaaatcaacgattataggtctattttgcgagattttatgtaattttgtgttgattttatgttttggttgatctaaattcctgtaaagtggtgtagtgg 44317719  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||||| |||||||    
T  44317720 cccacccg-aaaatttaaataatttaattatagg 44317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 8530264 - 8530387
Alignment:
Q  116 ataggtctattttgcgagatttta------tataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccga 209  Q
    ||||||||||||||||||||||||      || |||||| |||| || |||||||| ||||||||| ||||| |||||| ||||| ||||||||||||||    
T  8530264 ataggtctattttgcgagattttaattttatacaattttctgtcggttttaggtttcggttgatcccaattcccgcaaattggtgcagtggtccacccga 8530363  T
Q  210 aaaatttaaataatttagttatag 233  Q
    ||||||||||||||| | ||||||    
T  8530364 aaaatttaaataattcaattatag 8530387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 25299177 - 25299060
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  || ||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||| ||| ||||||    
T  25299177 ataggtctattttgcgagattttatgcaactttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggccca-ccggaaaatt 25299079  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  25299078 taaataattcaattatagg 25299060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 24544822 - 24544690
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| |||||||||||||||||||||  |||||| |||| || ||| | ||||||||||||||||||  ||||||||||| |||||    
T  24544822 aaaaaatcaacgattataagtctattttgcgagattttatgcaattttgtgtcggttttatgctttggttgatccaaattcctgcaaagtggtgtagtgg 24544723  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| || ||||||||||||||| | |||||||    
T  24544722 cccactcg-aaaatttaaataattcaattatagg 24544690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 37343082 - 37343163
Alignment:
Q  143 aattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatt 224  Q
    ||||||||||| || ||| |||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  37343082 aattttatgtcggttttaagtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatttaaataatt 37343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 48708521 - 48708389
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||||| ||  | ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  48708521 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttatatcgattttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 48708422  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||| | ||||||||||||||| | |||||||    
T  48708421 cccacctg-aaaatttaaataattcaattatagg 48708389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 919813 - 919682
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  |||| ||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||     
T  919813 aaaaatcaacgattatagatctattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggc 919714  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||| | ||||||||||||||| | |||||||    
T  919713 ccacctg-aaaatttaaataattcaattatagg 919682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 21852055 - 21852187
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    ||||||||||||  |||||| || |||||||||||||||| |||||| |||| || |||| ||| | |||||||||||| | | ||||||||| |||||     
T  21852055 aaaaattaacgatgataggtatactttgcgagattttatacaattttgtgtccgttttagatttcgattgatccaaatttttgtaaagtggtgtagtggc 21852154  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||| ||||||||||||||| ||| | |||||||    
T  21852155 ccatccgaaaaatttaaattattcaattatagg 21852187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 44052562 - 44052431
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  ||||||||||||||||||||||||| ||||||| |||  || ||| |||||| |||||||||||||   |||||||||| ||||      
T  44052562 aaaaatcaacgattataggtctattttgcgagattttatgtaattttgtgttggttttatgttttgattgatccaaattcctacaaagtggtgtagtgac 44052463  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| ||||||||||||||| | |||||||    
T  44052462 ccacccg-aaaatttaaataattcaattatagg 44052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 49001572 - 49001454
Alignment:
Q  116 ataggtctattttgcgaga--ttttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaa 213  Q
    |||||| ||||||||||||  ||||||| ||||||||||| ||  ||||||| | ||||||||||||| || ||||||||| ||||||||| ||||||||    
T  49001572 ataggtatattttgcgagagattttatacaattttatgtcggttctaggtttag-ttgatccaaattcccgtaaagtggtgtagtggtccatccgaaaaa 49001474  T
Q  214 tttaaataatttagttatag 233  Q
    ||||||||||| | ||||||    
T  49001473 tttaaataattcaattatag 49001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 37125748 - 37125878
Alignment:
Q  103 aaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtc 202  Q
    ||||| |||||  ||||||||||||||||| |||||||  ||||||  |||||| ||| ||||||||||||||||||||  ||||||||||  ||||  |    
T  37125748 aaaatcaacgattataggtctattttgcgatattttatgcaattttgcgtcagttttacgttttggttgatccaaattcctgcaaagtggtacagtgacc 37125847  T
Q  203 cacccgaaaaatttaaataatttagttatagg 234  Q
    |||||| ||||||||||||||| | |||||||    
T  37125848 cacccg-aaaatttaaataattcaattatagg 37125878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 29981811 - 29981679
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||| || |||||||  |||||| |||| || ||| ||||||||| ||||||||||  ||||||||||| |||||    
T  29981811 aaaaaatcaacgattataggtctactttgtgatattttatgcaattttgtgtcggttttaagttttggtttatccaaattcctgcaaagtggtgtagtgg 29981712  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  29981711 cccacccg-aaaatttaaataattcaattatagg 29981679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 6849806 - 6849937
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||| |||||| | || || ||| |||||||||||| ||||||    |||||||||| |||||    
T  6849806 aaaaaatcaacgattataggtctaatttgcgagattttatacaattttgtatcggttttatgttttggttgattcaaatttctacaaagtggtgtagtgg 6849905  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  6849906 cccacccg-aaaatttaaataattcaattatag 6849937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 46224864 - 46224733
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||  ||||||||||||||||||||  |||||| | ||  | ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  46224864 aaaaaattaacgattataaatctattttgcgagattttatgcaattttgtatcgattttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 46224765  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  46224764 cccacccg-aaaatttaaataattcaattatag 46224733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 6849934 - 6850052
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| || ||||| || || |||||||| ||||||||||||||   ||||| | ||  |||||| |||||||||||||    
T  6849934 atagatctattttgtgagattttatacaaatttatatcggttttaggtttcggttgatccaaatttctgcaaattagtatagtggttcacccgaaaaatt 6850033  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  6850034 taaataattcaattatagg 6850052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 29169995 - 29170127
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| | ||  | ||| ||||||||||||||||||||   |||||||||| ||| |    
T  29169995 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttgtatcgattttatgttttggttgatccaaattcctacaaagtggtgtagtag 29170094  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  29170095 cccaccc-aaaaatttaaataattcaattatagg 29170127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 23177396 - 23177517
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  ||| |||||||||||||||||||||  |||||| | ||  | |||  ||||||||||||||||||   ||||||||||| |||||     
T  23177396 aaaaatcaacgattataagtctattttgcgagattttatgcaattttgtatcgattttatattttggttgatccaaatttctgcaaagtggtgtagtggc 23177495  T
Q  202 ccacccgaaaaatttaaataatt 224  Q
    |||||| ||||||||||||||||    
T  23177496 ccaccc-aaaaatttaaataatt 23177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 40567042 - 40567151
Alignment:
Q  124 attttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataat 223  Q
    |||||||||||||||||  |||||| |||  || ||| ||||| ||||||||||||||  ||||||||||| ||||| ||||||| |||||||||||| |    
T  40567042 attttgcgagattttatgcaattttgtgttggttttatgttttagttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatttaaatagt 40567140  T
Q  224 ttagttatagg 234  Q
    | | |||||||    
T  40567141 tcaattatagg 40567151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 25030372 - 25030437
Alignment:
Q  168 gttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatag 233  Q
    |||||||||||||| |||||||||||| |||||| || || |||||||||||||||||| ||||||    
T  25030372 gttgatccaaattcccgcaaagtggtgtagtggttcaaccaaaaaatttaaataatttaattatag 25030437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 47561780 - 47561912
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||| |||||||  |||||| |||  || ||| |||||||||||||||||||   |||||||| || ||||     
T  47561780 aaaaaatcaacgattataggtctattttgcgatattttatgcaattttgtgtaggttttatgttttggttgatccaaattactgcaaagtgatgtagtga 47561879  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| || |||||||||||||||| | |||||||    
T  47561880 accaacc-aaaaatttaaataattcaattatagg 47561912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 46601056 - 46601178
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||||||||| | || |||||||||| || |  ||||| || ||| |||| || ||||  ||  |||| || |||||| |||||||||||| |||||     
T  46601056 aaaaattaacgatcctatgtctattttgtgaaagattatacaactttgtgtcggttttagaattcagttggtctaaattcccgcaaagtggtgcagtggc 46601155  T
Q  202 ccacccgaaaaatttaaataatt 224  Q
    ||| |||||||||||||||||||    
T  46601156 ccatccgaaaaatttaaataatt 46601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 9042462 - 9042391
Alignment:
Q  162 gttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||||||||||||||||   |||||||||| |||||  |||||| ||||||||||||||| | |||||||    
T  9042462 gttttggttgatccaaattcctacaaagtggtgtagtggcacacccg-aaaatttaaataattcaattatagg 9042391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 42225367 - 42225459
Alignment:
Q  113 accataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccac 205  Q
    |||||| |||||||||||||||||||| | ||||||  | |||| |||| ||||||   || ||||||| | |||||||||| || |||||||    
T  42225367 accataagtctattttgcgagattttaaacaattttgaggcagttttagtttttggcaaattcaaattcccccaaagtggtgtagcggtccac 42225459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 44317748 - 44317780
Alignment:
Q  116 ataggtctattttgcgagattttatataatttt 148  Q
    |||||||||||||||||||||||||| ||||||    
T  44317748 ataggtctattttgcgagattttatacaatttt 44317780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 45807065 - 45807113
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttta 149  Q
    ||||||||||| |  |||||||||||||||||||||||| | |||||||    
T  45807065 aaaaaattaacaattataggtctattttgcgagattttaaacaatttta 45807113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 1289 - 1402
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1289 gtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattctcgcaaattggtgtagtggtccacccgaaaaatttaaa 1388  T
Q  220 taatttagttatag 233  Q
    ||||| | ||||||    
T  1389 taattcaattatag 1402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 1157 - 1279
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||||||||| ||| |||||||||||  |||||| ||||  | ||| ||||||||||||||||||||  ||||||||||| |||||    
T  1157 aaaaaatcaacgactataggtctacttttcgagattttatgcaattttgtgtcgattttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 1256  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  1257 cccacccg-aaaatttaaataatt 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 43471559 - 43471426
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||| || |||||||||| |||||||||||||||||||||||||| ||| |    
T  43471559 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgtcggttttaggttttgattgatccaaattctcgcaaagtggtgtagtag 43471460  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||||||||||||||| |||| | |||||||    
T  43471459 tccacccgaaaaatttaaacaattcaattatagg 43471426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 2249762 - 2249880
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  2249762 ataggtctattttgcgagattttatacgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 2249861  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  2249862 taaataattcaattatagg 2249880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 6749983 - 6749865
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  6749983 ataggtctattttgcgatattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 6749884  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  6749883 taaataattcaattatagg 6749865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 11935480 - 11935348
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    ||||||||||||  ||| |||||||||||||||||||||| |||||| |||| || |||| |||||||||||||||||||||| ||||||||| |||||     
T  11935480 aaaaattaacgattataagtctattttgcgagattttatacaattttgtgtcggttttagattttggttgatccaaattctcgtaaagtggtgtagtggc 11935381  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||| |||||||||||||||| | |||||||    
T  11935380 ccacccaaaaaatttaaataattcaattatagg 11935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 38527361 - 38527472
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    ||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||    
T  38527361 tattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccaaaaaatttaaataa 38527460  T
Q  223 tttagttatagg 234  Q
    |||| |||||||    
T  38527461 tttatttatagg 38527472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 13615940 - 13615822
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||  |||||| ||||| ||||| ||||| ||||||||    
T  13615940 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaatttccgcaaattggtgtagtggcccacctgaaaaatt 13615841  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  13615840 taaataattcaattatagg 13615822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 31392727 - 31392845
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| | ||||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  31392727 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcgattgatcccaattctcgcaaattggtgtagtggcccacccgaaaaatt 31392826  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  31392827 taaataattcaattatagg 31392845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 36436159 - 36436041
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  36436159 ataggtctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 36436060  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  36436059 taaataattcaattatagg 36436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 26293341 - 26293458
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  26293341 ataggtctattttgcgagattttatacgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 26293440  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  26293441 taaataattcaattatag 26293458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 16194433 - 16194541
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||| | ||||||||||||||    
T  16194433 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtagcccacccgaaaaatt 16194532  T
Q  216 taaataatt 224  Q
    |||||||||    
T  16194533 taaataatt 16194541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 23869844 - 23869952
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  23869844 ataggtatattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 23869943  T
Q  216 taaataatt 224  Q
    |||||||||    
T  23869944 taaataatt 23869952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 11764975 - 11765093
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| ||||  | |||||||||||| |||||| ||||| ||||||||||||||||||||    
T  11764975 ataggtctattttgcgagattttatacaattttatgtcggttttatgtttcagctgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 11765074  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  11765075 taaataattcaattatagg 11765093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 42016684 - 42016802
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||| |||||| ||||| || || |||||| |||||||    
T  42016684 ataggtctattttgcgagattttatacaattttatgtcggttttaagttttggttgatccaaattcccgcaaattggtgtagcggcccacccaaaaaatt 42016783  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  42016784 taaataattcaattatagg 42016802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 44545706 - 44545588
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || ||| |||| ||||||||||||||| |||||| ||||| ||||||||||| ||||||||    
T  44545706 ataggtctattttgcgagattttatacaattttatgttggttttaagtttcggttgatccaaattcccgcaaattggtgtagtggtccacctgaaaaatt 44545607  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44545606 taaataattcaattatagg 44545588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 26293213 - 26293345
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  26293213 aaaaaattaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 26293312  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  26293313 cccacccg-aaaatttaaataattcaattatagg 26293345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 28745470 - 28745362
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||||||||||||| | || |||| |||||||||||| |||||| |||||| ||||| ||||| ||||| ||||||||    
T  28745470 ataggtctattttgcgagattttatataattttatgccggttttagattttggttgatctaaattcccgcaaattggtgtagtggcccacctgaaaaatt 28745371  T
Q  216 taaataatt 224  Q
    |||||||||    
T  28745370 taaataatt 28745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 26860639 - 26860521
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||||  |||||| || || ||||| ||||||||||||||    
T  26860639 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatcccaatttccgcaaattgatgtagtggcccacccgaaaaatt 26860540  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  26860539 taaataattcaattatagg 26860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 34983457 - 34983575
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||  ||||| ||||| ||||  |||||| |||||||    
T  34983457 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattccagcaaattggtgtagtgacccacccaaaaaatt 34983556  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  34983557 taaataattcaattatagg 34983575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 7366337 - 7366450
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| | ||||||||||||| |||||| ||||| ||||| |||| ||||||||||||||    
T  7366337 tctattttgcgagattttatacaattttatgtcggttttaggtttcgattgatccaaattcccgcaaattggtgtagtggcccacgcgaaaaatttaaat 7366436  T
Q  221 aatttagttatagg 234  Q
    |||| | |||||||    
T  7366437 aattcaattatagg 7366450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 11935352 - 11935235
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||| ||||||| ||||||||||| || |||| ||| ||||||||||||||| |||||||||||| | ||| ||||| ||||||||    
T  11935352 ataggtctattttgcgaggttttatacaattttatgtcggttttagatttcggttgatccaaattcccgcaaagtggtgtattggcccaccagaaaaatt 11935253  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  11935252 taaataattcaattatag 11935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 23869716 - 23869848
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||| ||||||| ||| |||||    
T  23869716 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcttgcaaagtagtgtagtgg 23869815  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  23869816 cccacccg-aaaatttaaataattcaattatagg 23869848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 7366204 - 7366326
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| |||||||||||||||||||||||||  |||||| ||| ||| ||| |||||| |||||||||||||  ||||||||||| |||||    
T  7366204 aaaaaatcaacgactataggtctattttgcgagattttatgcaattttgtgtgagttttatgttttgcttgatccaaattcctgcaaagtggtgtagtgg 7366303  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  7366304 cccacccg-aaaatttaaataatt 7366326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 22674845 - 22674722
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || |||||||| || |||||||||||| |||||| ||||| |||||    
T  22674845 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttaggtttcggctgatccaaattcccgcaaattggtgtagtgg 22674746  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||||| ||||||||||||||||    
T  22674745 cccacccaaaaaatttaaataatt 22674722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 1021045 - 1020927
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||| ||||||| |||||| ||||| ||| | ||| ||||||||||    
T  1021045 ataggtctattttgagagattttatacaattttatgtcggttttaggtttcggttgattcaaattcccgcaaattggtgtagtagcccatccgaaaaatt 1020946  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  1020945 taaataattcaattatagg 1020927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 1021158 - 1021041
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || ||| | ||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  1021158 ataggtctattttgcgagattttatacaattttgtgtcggttttatgatttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 1021060  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  1021059 taaataattcaattatagg 1021041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 1115128 - 1115011
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || ||| | |||||||||||||||||   ||||||||||| ||||| ||||||| ||||||    
T  1115128 ataggtctattttgcgagattttatacaattttgtgtcggttttatgatttggttgatccaaatttctgcaaagtggtgtagtggcccacccg-aaaatt 1115030  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||||| |||||||    
T  1115029 taaataatttaattatagg 1115011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 12995147 - 12995265
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||  |||||||||| || |||||||| || |||||||| ||||||| ||||||  |||||| ||||| ||||||||||||||||||||    
T  12995147 ataggtctattttgtaagattttatacaaatttatgtcggttttaggtttcggttgattcaaatttccgcaaattggtgtagtggtccacccgaaaaatt 12995246  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  12995247 taaataattcaattatagg 12995265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 1115015 - 1114898
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||   | |||||||| |||||||||||||||  ||||| ||||| ||||| | ||||||||||||    
T  1115015 ataggtctattttgcgagattttatacaattttatgttgattttaggtttcggttgatccaaattcctgcaaattggtgtagtggcctacccgaaaaatt 1114916  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  1114915 taaataattcaattatag 1114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 34983330 - 34983461
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||     
T  34983330 aaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggc 34983429  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||| || |||||||||||||||| | |||||||    
T  34983430 ccatcc-aaaaatttaaataattcaattatagg 34983461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 11764847 - 11764979
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||| || ||| |||| || ||| |||||||||||| |||||||  ||||||||||| |||||    
T  11764847 aaaaaatcaacgattataggtctattttgcaagattttatacaactttgtgtcggttttatgttttggttgattcaaattcctgcaaagtggtgtagtgg 11764946  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||| | |||||||||||||||| | |||||||    
T  11764947 tccacac-aaaaatttaaataattcaattatagg 11764979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 13616068 - 13615936
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||   | ||| ||||||||||||||||||||  ||||| ||||| |||||    
T  13616068 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttgtttttatgttttggttgatccaaattcctgcaaaatggtgtagtgg 13615969  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||||| |||||||    
T  13615968 cccacccg-aaaatttaaataatttaattatagg 13615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 31643716 - 31643583
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| ||| || ||| ||||||||| |||||||||||| ||||||||||| || ||| |||| |  |||| ||||||| ||||||||||||  ||||    
T  31643716 aaaaaatcaaccactatatgtctattttacgagattttatacaattttatgtcggttttaagtttcgcctgattcaaattcccgcaaagtggtgtggtgg 31643617  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| |||||||||||||||| | |||||||    
T  31643616 tccacccaaaaaatttaaataattcaattatagg 31643583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 32099984 - 32100121
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||| ||||||| ||||||| || ||| |||||||||||| |||||| ||||||| |||||||| |||||||| |||||| | |||||||||| |||||    
T  32099984 aaaaatttaacgatcataggtatactttacgagattttatacaattttgtgtcagttttaggtttcggttgatctaaattcccacaaagtggtgtagtgg 32100083  T
Q  201 t-----ccacccgaaaaatttaaataatttagttatag 233  Q
    |     ||||||||||||||||||||||| | ||||||    
T  32100084 tgtgacccacccgaaaaatttaaataattcaattatag 32100121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 36436287 - 36436155
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  ||| ||||||||||||| |||||||  |||||| |||| || ||| |||||| |||||||||||||  ||||||||||| |||||    
T  36436287 aaaaaattaacgattataagtctattttgcgatattttatgcaattttgtgtcggttttatgttttgcttgatccaaattcctgcaaagtggtgtagtgg 36436188  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  36436187 cccacccg-aaaatttaaataattcaattatagg 36436155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 38763767 - 38763899
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||| ||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  38763767 aaaaaatcaacgattataggtctatttagcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 38763866  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  38763867 cccacccg-aaaatttaaataattcaattatagg 38763899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 44545834 - 44545702
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||| |||||||| |||||| |||| || |||  |||||||||||||||||||| ||||||||||| | |||    
T  44545834 aaaaaatcaacgattataggtctattttgcgatattttatacaattttgtgtcggttttatattttggttgatccaaattcttgcaaagtggtgtaatgg 44545735  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| || ||||||||||||||| | |||||||    
T  44545734 cccactcg-aaaatttaaataattcaattatagg 44545702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 3836445 - 3836313
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| || ||| |||| |||||||| |||||||||||| |||||| |||| || |||||||||||||||||||||||| ||| |||||||| ||||     
T  3836445 aaaaaatcaaggactatagatctattttacgagattttatacaattttgtgtcggttttaggttttggttgatccaaattcccgcgaagtggtgtagtga 3836346  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     |||||  |||| ||||||||||| | ||||||    
T  3836345 accacctaaaaattttaaataattcaattatag 3836313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 2249649 - 2249766
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||  |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| ||||| ||||||| ||||||    
T  2249649 atagatctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 2249747  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  2249748 taaataattcaattatagg 2249766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 38763895 - 38763961
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattct 182  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  38763895 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattct 38763961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 16194305 - 16194437
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| |||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||| ||||||| |||||    
T  16194305 aaaaaatcaacgattataagtctattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcagagtggtgtagtgg 16194404  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  16194405 cccacccg-aaaatttaaataattcaattatagg 16194437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 28745597 - 28745466
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||||||||||||||||||||||  |||||| ||||  | ||| ||||||||| ||||||||||  ||||||||||| |||||    
T  28745597 aaaaaattaacgattataggtctattttgcgagattttatgcaattttgtgtcgattttatgttttggtt-atccaaattcctgcaaagtggtgtagtgg 28745499  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
      |||||| ||||||||||||||| | |||||||    
T  28745498 ctcacccg-aaaatttaaataattcaattatagg 28745466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 34494580 - 34494448
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||| ||||||||||||||||  |||||| | || || ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  34494580 aaaaaatcaacgattataggtctcttttgcgagattttatgcaattttgtatcggttttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 34494481  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  34494480 cccacccg-aaaatttaaataattcaattatagg 34494448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 41699237 - 41699367
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| ||||||||||||||||||  |||||| |||  || ||| |||||||||||||||||||| ||||||    || || ||    
T  41699237 aaaaaatcaacgattataggtatattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcccgcaaa---ttgtagagg 41699333  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||||||||||||||||||| | |||||||    
T  41699334 tccacccgaaaaatttaaataattcaattatagg 41699367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 26860752 - 26860635
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||  |||| || ||| |||||||||||||||||||    |||||||||| ||||| |||||| |||||||    
T  26860752 ataggtctattttgcgagattttatgcaatttcgtgtcggttttatgttttggttgatccaaatttctacaaagtggtgtagtggcccaccc-aaaaatt 26860654  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  26860653 taaataattcaattatagg 26860635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 12995019 - 12995151
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| | || || ||| ||||||||||||||||||||   |||| ||||| |||||    
T  12995019 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctacaaattggtgtagtgg 12995118  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  12995119 cccacccg-aaaatttaaataattcaattatagg 12995151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 38527227 - 38527359
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| ||||||||||  |||||| | || || ||| || |||||||||||||||||  ||||||||||| ||| |    
T  38527227 aaaaaatcaacgattataggtctattttgtgagattttatgcaattttgtatcggttttatgtcttggttgatccaaattcctgcaaagtggtgtagtag 38527326  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  38527327 cccacccg-aaaatttaaataattcaattatagg 38527359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 42016556 - 42016688
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| ||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||| || || |||||    
T  42016556 aaaaaatcaacgattataggtctattttgtgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaattgatgcagtgg 42016655  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  42016656 cccaccc-aaaaatttaaataattcaattatagg 42016688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 3836316 - 3836210
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| ||||||||||| || ||||||||  ||||||| |||||| ||||||||| || ||||| ||||||| ||||||    
T  3836316 atagatctattttgtgagattttatacaattttatgtctgttttaggtttcagttgatcaaaattcccgcaaagtgatgtagtgg-ccacccg-aaaatt 3836219  T
Q  216 taaataatt 224  Q
    |||||||||    
T  3836218 taaataatt 3836210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 17526129 - 17526037
Alignment:
Q  103 aaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtga 195  Q
    |||||||||||  |||| ||||||||||||||||||||| |||||  ||||||| ||||||||| ||||||| ||||| || |||||||||||    
T  17526129 aaaattaacgattatagatctattttgcgagattttatacaatttagtgtcagttttaggttttagttgatctaaattttcacaaagtggtga 17526037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 31392600 - 31392731
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| ||||||||||  |||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  31392600 aaaaaatcaacgattataagtctattttgttagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 31392699  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||  ||||||||| ||||| | |||||||    
T  31392700 cccaccc--aaaatttaagtaattcaattatagg 31392731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 19284015 - 19283903
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    ||||||||||||||||||||  |||||| | || || ||| ||||||||||||| ||||||  ||||||||||| ||||  ||||||| |||||||||||    
T  19284015 tctattttgcgagattttatgcaattttgtatcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtgtcccacccg-aaaatttaaat 19283917  T
Q  221 aatttagttatagg 234  Q
    |||| | |||||||    
T  19283916 aattcaattatagg 19283903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 29142036 - 29141903
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||| ||||||||||||| ||| ||||||||| |||||||| ||| || ||||  | |||| ||| |||||||||||||||||  ||| || || | |||    
T  29142036 aaaatattaacgaccataagtcaattttgcgatattttatacaatgttgtgtcgattttagatttcggttgatccaaattctcataaaatgatgtaatgg 29141937  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  29141936 cccacccaaaaaatttaaataattcaattatagg 29141903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 29035496 - 29035373
Alignment:
Q  110 acgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccga 209  Q
    |||| |||||||||| |||| |||||||| || || ||| ||||  | |||||||| |||||||| ||||| ||||||||||||| |||   |||| |||    
T  29035496 acgatcataggtctactttgtgagattttctacaactttgtgtcgattttaggtttcggttgatctaaattttcgcaaagtggtgtagtttcccactcga 29035397  T
Q  210 aaaatttaaataatttagttatag 233  Q
    ||||||||||||||| | ||||||    
T  29035396 aaaatttaaataattcaattatag 29035373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 2077563 - 2077676
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    |||||||||||||||| |||| |||||| |||| || |||| ||| || ||||| |||||| | |||||||| | |||||| || || ||||||||||||    
T  2077563 tctattttgcgagattctatacaattttgtgtcggttttagctttcggctgatctaaattcccacaaagtggggtagtggttcatccaaaaaatttaaat 2077662  T
Q  221 aatttagttatagg 234  Q
    |||| | |||||||    
T  2077663 aattcaattatagg 2077676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 6750110 - 6749979
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  ||||||||||||   ||||||||||  |||||| |||  || ||| |||||| ||||||||||||   ||||||||||| |||| |    
T  6750110 aaaaatcaacgattataggtctatttattgagattttatgcaattttgtgttggttttatgttttgattgatccaaatttctgcaaagtggtgtagtgat 6750011  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| ||||||||||||||| | |||||||    
T  6750010 ccacccg-aaaatttaaataattcaattatagg 6749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 8263278 - 8263325
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttt 148  Q
    ||||||||||||| | ||||||||||||| ||||||||| ||||||||    
T  8263278 aaaaaattaacgatcgtaggtctattttgtgagattttaaataatttt 8263325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 11483018 - 11482971
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttt 148  Q
    ||||||||||||||| || |||||||||||||||||||| | ||||||    
T  11483018 aaaaaattaacgaccgtatgtctattttgcgagattttaaacaatttt 11482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 16823312 - 16823430
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| |||||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  16823312 atagatctattttgcgagattttatatgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 16823411  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  16823412 taaataattcaattatagg 16823430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 8074343 - 8074221
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||||||||| |||||||| ||| |||||    
T  8074343 aaaaaatcaacgattataggtctattttgcgagattttatacaattttgtgtcggttttaggttttggttgatccaaattcccgcaaagtagtgtagtgg 8074244  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
    ||||||| ||||||||||||||||    
T  8074243 tccaccc-aaaaatttaaataatt 8074221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 7440457 - 7440339
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||  ||||| ||||| ||||| ||||||||||| ||    
T  7440457 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattcctgcaaattggtgtagtggcccacccgaaaattt 7440358  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  7440357 taaataattcaattatagg 7440339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 30773060 - 30773178
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  30773060 atagatctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 30773159  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  30773160 taaataattcaattatagg 30773178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 43348815 - 43348933
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  43348815 ataggtctattttgcgagattttatacgattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 43348914  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  43348915 taaataattcaattatagg 43348933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 3631440 - 3631548
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | ||| |||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  3631440 ataggtctattttgcgagattttatacaattttatgtcgattttaagttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 3631539  T
Q  216 taaataatt 224  Q
    |||||||||    
T  3631540 taaataatt 3631548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 32304629 - 32304521
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| || ||| ||||| ||||| ||||||||||||||    
T  32304629 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccggaaattggtgtagtggcccacccgaaaaatt 32304530  T
Q  216 taaataatt 224  Q
    |||||||||    
T  32304529 taaataatt 32304521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 25701397 - 25701280
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||| ||||||||||||||| | |||| ||||| ||||||||||||||||||||    
T  25701397 ataggtctattttgcgagattttatacaattt-atgtcggttttaggtttcggttgatccaaattcccacaaattggtgtagtggtccacccgaaaaatt 25701299  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  25701298 taaataattcaattatagg 25701280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 26525206 - 26525088
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || | ||||||  |||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  26525206 ataggtctattttgcgagattttatacaattttatgtcggtttaaggtttcagttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 26525107  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  26525106 taaataattcaattatagg 26525088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 19577285 - 19577152
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||| |||||||||| | |||||||| |||||| |||| ||  ||| ||||||||||||||||||| |||||||||||| |||||    
T  19577285 aaaaaattaacgattatagatctattttgcaacattttatacaattttgtgtcggttctagattttggttgatccaaattcccgcaaagtggtgtagtgg 19577186  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||| |||||||||||||||||||| |||||||    
T  19577185 cccactcgaaaaatttaaataatttaattatagg 19577152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 26297098 - 26296977
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||| |||||||||||| |||| || |||||||||||||||||||||||| |||||||||||| ||||| ||| || ||| |||    
T  26297098 ataggtctattttgcaagatcttatataattttgtgtcggttttaggttttggttgatccaaattcccgcaaagtggtgtagtggcccatccaaaatatt 26296999  T
Q  216 taaataatttagttataggcct 237  Q
    ||||||||| | ||||||||||    
T  26296998 taaataattcaattataggcct 26296977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 41817506 - 41817629
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||| |||| ||||| ||||||| |||||||| |||||  ||||||| |||| ||||||||||||||||||   ||||||||||| |||||    
T  41817506 aaaaaattaacgatcatatgtctactttgcgatattttatacaatttagtgtcagttttagattttggttgatccaaatttctgcaaagtggtgtagtgg 41817605  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||||||||||||||||||||||    
T  41817606 cccacccgaaaaatttaaataatt 41817629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 43358591 - 43358709
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||||||||||||||| ||||||||||| || |||||||  ||||||||||||||| |||||| ||||| ||||| |||||| |||||||    
T  43358591 ataggtttattttgcgagattttatacaattttatgtctgttttaggttacggttgatccaaattcccgcaaattggtgtagtggcccacccaaaaaatt 43358690  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  43358691 taaataattcaattatagg 43358709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 8074210 - 8074097
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    ||||||||||||||||||||| ||||| ||||| || |||||||| ||||||| ||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  8074210 tctattttgcgagattttatacaatttaatgtcggttttaggtttcggttgattcaaattcccgcaaagtggtgtagtggcccatccgaaaaatttaaat 8074111  T
Q  221 aatttagttatagg 234  Q
    |||| | |||||||    
T  8074110 aattcaattatagg 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 9737811 - 9737679
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  9737811 aaaaaattaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 9737712  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  9737711 cccacccg-aaaatttaaataattcaattatagg 9737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 41084686 - 41084553
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| |||||| ||||  | |||||||||| ||||||||||||  |||||||||||| |||||    
T  41084686 aaaaaatcaacgattataggtctattttgcgagattttatagaattttgtgtcgattttaggttttgattgatccaaatttccgcaaagtggtgtagtgg 41084587  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| || |||||||||||||||| | |||||||    
T  41084586 cccatccaaaaaatttaaataattcaattatagg 41084553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 13013231 - 13013113
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||||||| || |||||| | ||||||||||||||  |||||| ||||  ||||||||||||||||||||    
T  13013231 ataggtctattttgtgagattttatacaaatttatgtcggttttaggtatcggttgatccaaatttccgcaaattggtatagtggtccacccgaaaaatt 13013132  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  13013131 taaataattcaattatagg 13013113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 43348687 - 43348819
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||| ||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  43348687 aaaaaattaacgattataggtttattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 43348786  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  43348787 cccaccc-aaaaatttaaataattcaattatagg 43348819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 15374168 - 15374290
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||| ||||||| ||||||||||| | |||    
T  15374168 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatcgaaattcttgcaaagtggtgtaatgg 15374267  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
    ||||||| | ||||||||||||||    
T  15374268 tccaccc-acaaatttaaataatt 15374290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 20487025 - 20487148
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||| ||||||| |||||||| |||||||||| |||||| |||| || |||||||| || ||||||||||||  ||||||||||| |||||    
T  20487025 aaaaaattaacgatcataggtatattttgcaagattttatacaattttgtgtcggttttaggtttcggctgatccaaattcctgcaaagtggtgtagtgg 20487124  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
      || |||||||||||||| ||||    
T  20487125 ctcatccgaaaaatttaaaaaatt 20487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 26785011 - 26785134
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || ||||||||  |||||||||||||| |||||| ||||| |||||  ||| |||||| ||    
T  26785011 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcagttgatccaaattcccgcaaattggtgtagtggctcactcgaaaagtt 26785110  T
Q  216 taaataatttagttataggccttt 239  Q
    ||||||||| | ||||||| ||||    
T  26785111 taaataattcaattataggtcttt 26785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 10925690 - 10925808
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| || |||||||| || |||||||| |||||||||||||| | ||||| ||||| ||||||| ||| ||||||||    
T  10925690 atagatctattttgtgagattttatacaaatttatgtcggttttaggtttcggttgatccaaattttggcaaattggtgtagtggtctaccagaaaaatt 10925789  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  10925790 taaataattcaattatagg 10925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 13084619 - 13084501
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||||||| || |||||| |  |||||||||||||  |||||| ||||  ||||||||||||||||||||    
T  13084619 ataggtctattttgtgagattttatacaaatttatgtcggttttaggtatcagttgatccaaatttccgcaaattggtatagtggtccacccgaaaaatt 13084520  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  13084519 taaataattcaattatagg 13084501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 234
Target Start/End: Original strand, 43358462 - 43358595
Alignment:
Q  100 gaaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    |||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||| ||| ||||    
T  43358462 gaaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtagtgtagtg 43358561  T
Q  200 gtccacccgaaaaatttaaataatttagttatagg 234  Q
      ||||||| ||||||||||||||| | |||||||    
T  43358562 acccacccg-aaaatttaaataattcaattatagg 43358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 3631312 - 3631444
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||  || ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  3631312 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttggttttatgttttagttgatccaaattcctgcaaagtggtgtagtgg 3631411  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  3631412 cccacccg-aaaatttaaataattcaattatagg 3631444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 9596142 - 9596025
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| ||||||||||| || ||||||||  |||||| |||||||  ||||| ||||| ||||| ||||||||||||||    
T  9596142 atagatctattttgtgagattttatacaattttatgtcggttttaggtttgtgttgattcaaattcctgcaaattggtgtagtggcccacccgaaaaatt 9596043  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  9596042 taaataattcaattatag 9596025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 26525334 - 26525202
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||||||||| |  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  26525334 aaaaaatcaacgattataggtctattttgcgagattttttgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 26525235  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||| ||||||||||||||| | |||||||    
T  26525234 cccatccg-aaaatttaaataattcaattatagg 26525202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 16823184 - 16823315
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||| ||||||  ||||||||||| ||||     
T  16823184 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtga 16823283  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  16823284 cccacccg-aaaatttaaataattcaattatag 16823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 7440585 - 7440463
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| ||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  7440585 aaaaaatcaacgattatagatctattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 7440486  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  7440485 cccacccg-aaaatttaaataatt 7440463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 20656947 - 20656829
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||| ||| |||||||||||  |||||| | || || ||| |||||||||||||||||||  |||||| ||||| ||||||||| ||||||||||    
T  20656947 ataggtctaatttacgagattttatgcaattttgtatcggttttatgttttggttgatccaaatttccgcaaattggtgtagtggtccatccgaaaaatt 20656848  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  20656847 taaataattcaattatagg 20656829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 41084557 - 41084440
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| | ||||||||| || |||||||| |||| || ||||||| |||||||||||| ||| ||||||| ||||||||    
T  41084557 ataggtctatttt-cgagattttatacatttttatgtcggttttaggtttcggttaattcaaattcccgcaaagtggtgtagtagtccaccggaaaaatt 41084459  T
Q  216 taaataatttagttatagg 234  Q
    |||| |||| | |||||||    
T  41084458 taaacaattcaattatagg 41084440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 22579037 - 22578916
Alignment:
Q  103 aaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtc 202  Q
    ||||||||||| |||| || |||||| ||||||||| || |||||| |||| || |||||||| || |||||||||||| |  ||||||||| ||||||     
T  22579037 aaaattaacgatcataagtttattttacgagattttgtacaattttgtgtcggttttaggtttcggctgatccaaattcccataaagtggtgtagtggtt 22578938  T
Q  203 cacccgaaaaatttaaataatt 224  Q
    || |||||||||||||||||||    
T  22578937 catccgaaaaatttaaataatt 22578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 25701525 - 25701393
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| |||||||||| ||||||||| ||||||| | || || ||| ||||||||||||| ||||||  ||||||||||| |||||    
T  25701525 aaaaaatcaacgattatagatctattttgcaagattttatgtaattttgtatcggttttatgttttggttgatctaaattcctgcaaagtggtgtagtgg 25701426  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  25701425 cccacccg-aaaatttaaataattcaattatagg 25701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 29390322 - 29390453
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| |||||| |||||||||||  |||||| |||  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  29390322 aaaaaatcaacgattataggtgtattttacgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 29390421  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  29390422 cccacccg-aaaatttaaataattcaattatag 29390453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 30772932 - 30773063
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||  |||||| | || || ||| |||||||||||| |||||||  ||||||||||| |||||    
T  30772932 aaaaaatcaacgattataggtctattttgcaagattttatgcaattttgtatcggttttatgttttggttgattcaaattcctgcaaagtggtgtagtgg 30773031  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     |||||| |||||||||||||||| | ||||||    
T  30773032 cccaccc-aaaaatttaaataattcaattatag 30773063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 26296984 - 26296868
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||| ||||||| |||||||||||| | ||||||||| || |||| ||| ||||||| ||||||| |||||||||||| ||| |||||||||||||||     
T  26296984 ataggcctatttt-cgagattttatacatttttatgtcggttttagatttcggttgattcaaattcccgcaaagtggtgtagtagtccacccgaaaaatg 26296886  T
Q  216 taaataatttagttatag 233  Q
    |||| |||| | ||||||    
T  26296885 taaacaattcaattatag 26296868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 9596270 - 9596139
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| |||||||||||||||||||||  |||||| |||| || |||  |||| |||||||||||||   ||||||||||| |||||    
T  9596270 aaaaaatcaacgattatatgtctattttgcgagattttatgcaattttgtgtcggttttatattttagttgatccaaatttctgcaaagtggtgtagtgg 9596171  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     |||||| |||||||||||||||| | ||||||    
T  9596170 cccaccc-aaaaatttaaataattcaattatag 9596139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 37042658 - 37042546
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||| | || ||||| ||||||||||||||||||||| |||||||| || || |||| ||| ||||||| ||||||| |||||||||| | | |||    
T  37042658 aaaaaattgatgatcatagatctattttgcgagattttatacaattttatatcggttttagatttcggttgattcaaattcccgcaaagtggcgtattgg 37042559  T
Q  201 tccacccgaaaaa 213  Q
     ||||||||||||    
T  37042558 cccacccgaaaaa 37042546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 30050196 - 30050074
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  ||||||||||||| ||| |||||||| |||||| ||||| | || ||||  ||||||| |||||| ||| ||||||||| |||||    
T  30050196 aaaaaattaacgattataggtctattttacgatattttatacaattttgtgtcaatttttggttacggttgattcaaattttcgtaaagtggtgtagtgg 30050097  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| || ||||||||||||||||    
T  30050096 -ccaacctaaaaatttaaataatt 30050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 28662170 - 28662303
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||| ||||||| |||||||| |||||||||||| |||||| ||| ||| ||| |||| || ||| |||||||   ||||| ||||| | |||    
T  28662170 aaaaaattaaccaccatagatctattttacgagattttatacaattttgtgttagttttaagtttcggctgaaccaaatttgtgcaaactggtgtattgg 28662269  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    | |  ||||||||||||||||||| | |||||||    
T  28662270 ttcctccgaaaaatttaaataattcaattatagg 28662303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 32304757 - 32304625
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| ||||||||| |||||||||||  |||||| |||| || |||  |||||||||||||||||||  ||||||||||| | |||    
T  32304757 aaaaaatcaacgattataagtctattttacgagattttatgcaattttgtgtcggttttatattttggttgatccaaattcctgcaaagtggtgtattgg 32304658  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| ||||||| |||||||| | |||||||    
T  32304657 cccaccc-aaaaattgaaataattcaattatagg 32304625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 10925562 - 10925693
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| ||||| ||||||||||||||| ||||||| | || || ||| ||||| |||||| |||||||   |||||||||| |||||    
T  10925562 aaaaaatcaacgattatatgtctaatttgcgagattttatgtaattttgtatcggttttatgttttagttgattcaaattcctacaaagtggtgtagtgg 10925661  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
    |||||| | ||||||||||||||| | ||||||    
T  10925662 tccacctg-aaaatttaaataattcaattatag 10925693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 15374301 - 15374399
Alignment:
Q  136 tttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||| | |||||| || || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| | ||||||||||||||||| | |||||||    
T  15374301 tttatacagttttatatcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccaactgaaaaatttaaataattcaattatagg 15374399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 5844159 - 5844281
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||| | |||||||||  |||||  ||||  | ||| ||||||||||||||||||| | ||||| |||||  ||||    
T  5844159 aaaaaatcaacgattataggtctattttactagattttatgcaatttggtgtcgattttatgttttggttgatccaaattattgcaaaatggtgtggtgg 5844258  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  5844259 cccacccg-aaaatttaaataatt 5844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 15374450 - 15374526
Alignment:
Q  158 ttaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| |||||| ||||| ||||  ||| | ||||||||||||||||| | |||||||    
T  15374450 ttaggtttcggttgatccaaattcccgcaaattggtgtagtgacccaactgaaaaatttaaataattcaattatagg 15374526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 13013359 - 13013280
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaatt 180  Q
    ||||||| |||||  ||||||||| ||||||||||||||   |||||| | ||||| ||| |||||||||||||||||||    
T  13013359 aaaaaatcaacgattataggtctaatttgcgagattttaagcaattttgtatcagttttatgttttggttgatccaaatt 13013280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 13084747 - 13084615
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| | ||  | ||| |||||||||||||||||||    ||||  |||| ||||     
T  13084747 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttgtatcgattttatgttttggttgatccaaatttctacaaaaaggtgcagtgt 13084648  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  13084647 cccacccg-aaaatttaaataattcaattatagg 13084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 20071317 - 20071209
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    ||||||||||||  | || | ||||||| ||||||||||| ||||||||||| || |||  ||| ||||||| ||||||  |  ||||||||| ||||||    
T  20071317 aaaaattaacgattaaagatttattttgtgagattttatacaattttatgtcggttttaaatttcggttgattcaaatttccataaagtggtgtagtggt 20071218  T
Q  202 ccacccgaa 210  Q
    ||| |||||    
T  20071217 ccatccgaa 20071209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 41832558 - 41832676
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  41832558 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatcccaattctcgcaaattggtgtagtggcccacccgaaaaatt 41832657  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  41832658 taaataattcaattatagg 41832676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 13233411 - 13233528
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  13233411 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaatcggtgtagtggtccacccgaaaaatt 13233510  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  13233511 taaataattcaattatag 13233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 13613069 - 13612952
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  13613069 ataggtctattttccgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 13612970  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  13612969 taaataattcaattatag 13612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 18491368 - 18491476
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  18491368 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 18491467  T
Q  216 taaataatt 224  Q
    |||||||||    
T  18491468 taaataatt 18491476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 31664144 - 31664026
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  31664144 ataggtctattttgcaagattttataaaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccgaaaaatt 31664045  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  31664044 taaataattcaattatagg 31664026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 44134674 - 44134792
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| |||||| | ||| ||||| ||||| ||||||||    
T  44134674 ataggtctattttgcgagattttatacaattttatgtcggttttaggttttggttgatccaaattcccgcaaattagtgtagtggcccacctgaaaaatt 44134773  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  44134774 taaataattcaattatagg 44134792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 40228406 - 40228289
Alignment:
Q  117 taggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattt 216  Q
    ||||||||||| |||||||||||||  ||||||||||||| |||||||| |||||||||||||||||||||| || || ||||| |||||||||||||||    
T  40228406 taggtctatttggcgagattttatacgattttatgtcagttttaggtttcggttgatccaaattctcgcaaattgttgtagtggcccacccgaaaaattt 40228307  T
Q  217 aaataatttagttatagg 234  Q
    |||||||| | |||||||    
T  40228306 aaataattcaattatagg 40228289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 50767087 - 50767220
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||  |||||||||||| |||||    
T  50767087 aaaaaatcaacgattataggtctattttgcgagattttatacaattttatgtcggttttaggttttgattgatccaaatttccgcaaagtggtgtagtgg 50767186  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||| ||||| | |||||||    
T  50767187 cccacccaaaaaatttaattaattcaattatagg 50767220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 233
Target Start/End: Complemental strand, 44745566 - 44745450
Alignment:
Q  117 taggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattt 216  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||||||| | ||||||||    
T  44745566 taggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccactcaaaaaattt 44745467  T
Q  217 aaataatttagttatag 233  Q
    |||||||| | ||||||    
T  44745466 aaataattcaattatag 44745450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 12700545 - 12700427
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| |||||| || ||||||||||    
T  12700545 ataggtctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtggttcatccgaaaaatt 12700446  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  12700445 taaataattcaattatagg 12700427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 16925287 - 16925405
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || |||||||| || |||||||| ||||||||||||||  |||||| ||||| ||||||||||||||||||||    
T  16925287 ataggtctattttgtgagattttatacaaatttatgtcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggtccacccgaaaaatt 16925386  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  16925387 taaataattcaattatagg 16925405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 38141534 - 38141416
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||| ||||||||||    
T  38141534 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccaaccgaaaaatt 38141435  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  38141434 taaataattcaattatagg 38141416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 43564603 - 43564717
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||  |||||||||||||||||    
T  43564603 gtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggaacacccgaaaaatttaaa 43564702  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  43564703 taattcaattatagg 43564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 11651071 - 11650939
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  11651071 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcatgcaaagtggtgtagtgg 11650972  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  11650971 tccacccg-aaaatttaaataattcaattatagg 11650939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 54795834 - 54795701
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||| |||||| |||| || |||| ||||| ||||||||||||| |||||||||||| |||||    
T  54795834 aaaaaatcaacgattataggtctattttgcaagattttatacaattttgtgtcggttttagattttgattgatccaaattcccgcaaagtggtgtagtgg 54795735  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  54795734 cccacccaaaaaatttaaataattcaattatagg 54795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 11650943 - 11650825
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||||||||| |||||| ||||| |||||  |||||||||||||    
T  11650943 ataggtttattttgggagattttatacaattttatgtcgattttaggttttggttgatccaaattcccgcaaattggtgtagtggcacacccgaaaaatt 11650844  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  11650843 taaataattcaattatagg 11650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 18491240 - 18491364
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| |||||||||| |||||||||||| || ||| ||||||||||||||||||||  ||||||||||| ||||     
T  18491240 aaaaaatcaacgattataggtctattttgtgagattttatgtaattttatgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgc 18491339  T
Q  201 tccacccgaaaaatttaaataattta 226  Q
     ||||||| |||||||||||||||||    
T  18491340 cccacccg-aaaatttaaataattta 18491364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 36955115 - 36954983
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||  || ||| ||||||||||||||||||||| ||||||||||| |||||    
T  36955115 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttggttttatgttttggttgatccaaattcttgcaaagtggtgtagtgg 36955016  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  36955015 cccacccg-aaaatttaaataattcaattatagg 36954983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 36954987 - 36954879
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | ||| |||| ||||||||||||| | |||||| ||||| ||||| ||||||||||||||    
T  36954987 ataggtctattttgcgagattttatacaattttatgtcgattttacgtttcggttgatccaaatccccgcaaattggtgtagtggcccacccgaaaaatt 36954888  T
Q  216 taaataatt 224  Q
    |||||||||    
T  36954887 taaataatt 36954879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 36801966 - 36801843
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || |||||||| || ||| |||||||| || ||| | ||| |||||    
T  36801966 aaaaaattaacgatcataagtctattttgcgagattttatataattttgtgtcggttttaggtttcggctgaaccaaattcccgtaaaatagtgtagtgg 36801867  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||||||||||||||| ||||||    
T  36801866 cccacccgaaaaatttatataatt 36801843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 6756010 - 6756127
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||||||||||||||  |||||||||| || ||| |||| ||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  6756010 ataggtctattttgcgagattttatactattttatgtcggttttatgtttcggttgatccaaattcccgcaaattggtgtagtgg-ccacccgaaaaatt 6756108  T
Q  216 taaataatttagttatagg 234  Q
    ||||| ||| | |||||||    
T  6756109 taaatgattcaattatagg 6756127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 36584604 - 36584722
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| ||||| |||||||||||||| ||| || ||||| |||||  |||||||||||||    
T  36584604 ataggtctattttgcgagattttatacaattttatgtcggttttaagttttagttgatccaaattcccgctaattggtgtagtggctcacccgaaaaatt 36584703  T
Q  216 taaataatttagttatagg 234  Q
    |||||| || | |||||||    
T  36584704 taaatatttcaattatagg 36584722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 54795705 - 54795588
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| | ||||||||| || |||||||| ||||||| ||||||| |||||||||||| ||| ||||||||||||||||    
T  54795705 ataggtctatttt-cgagattttatacatttttatgtcggttttaggtttcggttgattcaaattcccgcaaagtggtgtagtagtccacccgaaaaatt 54795607  T
Q  216 taaataatttagttatagg 234  Q
    |||| |||| | |||||||    
T  54795606 taaacaattcaattatagg 54795588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 13869211 - 13869328
Alignment:
Q  117 taggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattt 216  Q
    ||||||||||||| |||||||||||| ||||| |||| || |||||||| || |||||||||||   |||||||| || |||||||||||||||||||||    
T  13869211 taggtctattttgtgagattttatatcattttgtgtcggttttaggtttcggctgatccaaatttctgcaaagtgatgcagtggtccacccgaaaaattt 13869310  T
Q  217 aaataatttagttatagg 234  Q
    |||||||| | |||||||    
T  13869311 aaataattcaattatagg 13869328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 27270425 - 27270538
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| |||||| |||| || |||||||||| |||||| |||||| || ||||||||| ||||| |||||| |||||||||||    
T  27270425 gtctattttgcgagattttatacaattttgtgtcggttttaggttttgattgatcaaaattcccgtaaagtggtgtagtggcccacccaaaaaatttaaa 27270524  T
Q  220 taatttagttatag 233  Q
    ||||| | ||||||    
T  27270525 taattcaattatag 27270538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 41832429 - 41832562
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  ||| ||||||||||| |||||||||  ||||||||||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  41832429 aaaaaattaacgattatatgtctattttgcaagattttatgcaattttatgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 41832528  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||  ||||||||||| | |||||||    
T  41832529 cccacccaaaacttttaaataattcaattatagg 41832562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 4632791 - 4632687
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| |||||| ||| ||| |||| ||| ||||||||||||||| |||||||||||| |||||  ||| |||||||||||||    
T  4632791 gtctattttgcgagattttatacaattttgtgttagttttagatttcggttgatccaaattcccgcaaagtggtgtagtggctcacgcgaaaaatttaaa 4632692  T
Q  220 taatt 224  Q
    |||||    
T  4632691 taatt 4632687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 45670013 - 45670135
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||| |||||||||||||||||| ||||||| |||| || ||| ||||||||||||||||||||   |||||||||| |||||    
T  45670013 aaaaaatcaacgattataggtttattttgcgagattttatgtaattttgtgtcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 45670112  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||||||| |||||||||||||||    
T  45670113 cccacccg-aaaatttaaataatt 45670135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 2654887 - 2654769
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||  ||||||||||| ||||||| ||| || |||| ||| ||||||||| ||||  |||||| ||||| ||||||||||||||||||||    
T  2654887 ataggtctattttatgagattttatacaattttacgtcggttttagatttcggttgatcccaatttccgcaaattggtgtagtggtccacccgaaaaatt 2654788  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  2654787 taaataattcaattatagg 2654769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 27270535 - 27270652
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| |||||||| |||||||||||| | ||||||||| || |||||||| ||||||| ||||||| |||||||||||| ||| ||||||||||||||||    
T  27270535 atagatctatttt-cgagattttatacatttttatgtcggttttaggtttcggttgattcaaattcccgcaaagtggtgtagtagtccacccgaaaaatt 27270633  T
Q  216 taaataatttagttatagg 234  Q
    |||| |||| | |||||||    
T  27270634 taaacaattcaattatagg 27270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 31581727 - 31581621
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| | |||  || ||||||||||    
T  31581727 ataggtctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtactggctcatccgaaaaatt 31581628  T
Q  216 taaataa 222  Q
    |||||||    
T  31581627 taaataa 31581621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 36584491 - 36584608
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||| ||||||||||||||||||  |||||| ||| ||| ||| ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  36584491 ataggtatattttgcgagattttatgcaattttgtgttagttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 36584589  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  36584590 taaataattcaattatagg 36584608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 51001548 - 51001661
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    ||||||||||| | |||||||| |||||||||||  | |||||||| ||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  51001548 gtctattttgcaatattttatacaattttatgtcttttttaggtttcggttgatccaa-ttcccgcaaattggtgtagtggtccacccgaaaaatttaaa 51001646  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  51001647 taattcaattatagg 51001661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 38141662 - 38141530
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| | ||| | ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  38141662 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtatcaattttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 38141563  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  38141562 cccacccg-aaaatttaaataattcaattatagg 38141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 22647292 - 22647400
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||  || |||||||| ||||||| ||||||| || ||| ||||| ||||| |||||| ||||| |    
T  22647292 ataggtctattttgcgagattttatacaattttatgtttgttttaggtttcggttgattcaaattcccggaaattggtgtagtggcccacccaaaaaaat 22647391  T
Q  216 taaataatt 224  Q
    |||||||||    
T  22647392 taaataatt 22647400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 44745695 - 44745573
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  44745695 aaaaaatcaacgattataggtctattttgcaagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgcagtgg 44745596  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||| || |||||||||||||||    
T  44745595 cccactcg-aaaatttaaataatt 44745573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 10096433 - 10096316
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || ||| |||| | |||||||||||||  ||||| ||||| ||||| |||| || ||||||    
T  10096433 ataggtctattttgcgagattttatacaattttatgtcggttttaagtttcgattgatccaaattcctgcaaaatggtgtagtggcccactcg-aaaatt 10096335  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  10096334 taaataattcaattatagg 10096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 222
Target Start/End: Complemental strand, 19653621 - 19653516
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||| | ||||||||||| |||||||||||  | |||||||| ||||||||||||||| | |||| ||||| ||||||||| ||||||||||    
T  19653621 ataggtctattt-gtgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccacaaattggtgtagtggtccatccgaaaaatt 19653523  T
Q  216 taaataa 222  Q
    |||||||    
T  19653522 taaataa 19653516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 50767216 - 50767333
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||| |||||||||||| | ||||||||| || |||||||| ||||||| ||||||| |||||||||||| ||| |||||||  |||||||    
T  50767216 ataggtctatttt-cgagattttatacatttttatgtcggttttaggtttcggttgattcaaattcccgcaaagtggtgtagtagtccaccaaaaaaatt 50767314  T
Q  216 taaataatttagttatagg 234  Q
    |||| |||| | |||||||    
T  50767315 taaacaattcaattatagg 50767333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 6755882 - 6756014
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||   | ||| ||||| ||||||||||||||  ||||||||||| |||||    
T  6755882 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttgtttttatgtttttgttgatccaaattcctgcaaagtggtgtagtgg 6755981  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  6755982 cccacccg-aaaatttaaataattcaattatagg 6756014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 10096561 - 10096429
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||  ||||||||||||||||||||||||| |||| || ||| |||| ||||||||||||||  |||||||||||| ||| |    
T  10096561 aaaaaatcaacgattataggttcattttgcgagattttatataattttgtgtcggttttaagtttcggttgatccaaatttccgcaaagtggtgtagt-g 10096463  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||  | |||||||||||||||| | |||||||    
T  10096462 tccattcaaaaaatttaaataattcaattatagg 10096429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 13233283 - 13233415
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| |||||||||||| |||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  13233283 aaaaaatcaacgattatagatctattttgcgatattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 13233382  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||| | |||||||    
T  13233383 cccaccc-aaaaatttaaataattcaattatagg 13233415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 13613197 - 13613065
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||  || |||  |||||||||||||||||||   ||||||||||  ||||    
T  13613197 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgttggttttatattttggttgatccaaattcctacaaagtggtgttgtgg 13613098  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     |||||| |||||||||||||||||| |||||||    
T  13613097 cccaccc-aaaaatttaaataatttaattatagg 13613065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 16925159 - 16925291
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| ||||||||| |||||  |||||| | || || ||| ||||||||||||||||||||   |||||||||| |||||    
T  16925159 aaaaaatcaacgattataggtctaatttgcgagactttatgcaattttgtatcggttttatgttttggttgatccaaattcctacaaagtggtgtagtgg 16925258  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  16925259 tccacccg-aaaatttaaataattcaattatagg 16925291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 4632682 - 4632563
Alignment:
Q  115 cataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaat 214  Q
    |||||||||||||||||||||| |||| |||||| ||||  | ||||| || |||||||| |||||  ||| |||||||| ||||| |||||| ||||||    
T  4632682 cataggtctattttgcgagattatatacaattttgtgtcgattttaggattcggttgatctaaatttccgccaagtggtgtagtggaccacccaaaaaat 4632583  T
Q  215 ttaaataatttagttatagg 234  Q
    |||||||||| | |||||||    
T  4632582 ttaaataattcaattatagg 4632563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 40228535 - 40228413
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| |||| || ||| | ||||||||||||||||||  |||||||| || |||||    
T  40228535 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtgtcggttttatgctttggttgatccaaattcctgcaaagtgttgtagtgg 40228436  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     |||| || |||||||||||||||    
T  40228435 cccactcg-aaaatttaaataatt 40228413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 10393896 - 10393997
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    |||||||||||||||||||||||||||| |||| || |||||||| |  |||| ||||||  | |||||||||| ||||| |||||||||||||||| ||    
T  10393896 tctattttgcgagattttatataattttgtgtcggttttaggtttcgtctgattcaaatttccacaaagtggtgtagtggcccacccgaaaaatttatat 10393995  T
Q  221 aa 222  Q
    ||    
T  10393996 aa 10393997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 13857666 - 13857798
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| ||| |||||| ||||||| ||||||||||| |||||| |||  || ||| |||| || |||||||||||   | ||||||||| |||||    
T  13857666 aaaaaattaaagac-ataggtgtattttgtgagattttatacaattttgtgttggttttaagtttcggctgatccaaatttctgtaaagtggtgtagtgg 13857764  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||||||||||||||||||| | |||||||    
T  13857765 cccacccgaaaaatttaaataattcaattatagg 13857798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 44134547 - 44134678
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||| ||||||||||  |||||| | |  || ||| ||||||||||||||||||||  ||||||||||| ||||     
T  44134547 aaaaaatcaacgattataggtctattttgtgagattttatgcaatttt-tattggttttatgttttggttgatccaaattcctgcaaagtggtgtagtga 44134645  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  44134646 tccacccg-aaaatttaaataattcaattatagg 44134678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 7638861 - 7638745
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||||| |||| |||  |||||||||| |||||||||| |||||| ||||  | ||| |||| || ||| ||||||||||||||||||||| |||||     
T  7638861 aaaaattatcgactataaatctattttgcaagattttatacaattttgtgtcgattttacgtttcggctgacccaaattctcgcaaagtggtgtagtggc 7638762  T
Q  202 ccacccgaaaaatttaa 218  Q
    ||||||||||| |||||    
T  7638761 ccacccgaaaattttaa 7638745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 12700672 - 12700541
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    |||||| |||||  |||||| |||||||||||| |||||  |||||| ||||  | ||| ||||||||||||||||||||  ||||||||||| |||||     
T  12700672 aaaaatcaacgattataggtttattttgcgagactttatgcaattttgtgtcgattttatgttttggttgatccaaattcctgcaaagtggtgtagtggc 12700573  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||| |||||||||||| || | |||||||    
T  12700572 ccacccg-aaaatttaaatagttaaattatagg 12700541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 52581644 - 52581756
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt-ccacccgaaaaatttaaata 221  Q
    |||||| |||||||||||| ||||||||||| || |||||||| ||| ||||||||||  | |||| ||||| |||||| |||||| |||||||||||||    
T  52581644 tattttacgagattttatacaattttatgtcggttttaggtttcggtagatccaaatttccacaaattggtgtagtggtcccacccaaaaaatttaaata 52581743  T
Q  222 atttagttatagg 234  Q
    ||| | |||||||    
T  52581744 attcaattatagg 52581756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 31664248 - 31664140
Alignment:
Q  125 ttttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatt 224  Q
    ||||||||||||||||  ||||||  ||| || ||| | ||||||||||||||||||  ||||||||||| ||||| ||||||| |||||||||||||||    
T  31664248 ttttgcgagattttatgcaattttgagtcggttttatgatttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatttaaataatt 31664150  T
Q  225 tagttatagg 234  Q
     | |||||||    
T  31664149 caattatagg 31664140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 18735233 - 18735370
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttata----taattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaa 196  Q
    |||||||||||||  ||||||||||||||||||||||||||    ||||||| |||| ||   |||||| |||| ||| |||||  | |||||||||| |    
T  18735233 aaaaaattaacgattataggtctattttgcgagattttatacaattaattttgtgtcggtgacaggtttcggttaatctaaatttccacaaagtggtgta 18735332  T
Q  197 gtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    || ||||||||| ||||||||||| ||| | |||||||    
T  18735333 gtcgtccacccgcaaaatttaaattattcaattatagg 18735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 44817654 - 44817535
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||| ||||||||||||| ||| |||||||  |||||| |||| || ||| |||||||||||||||||||   ||||||||||  |||||    
T  44817654 aaaaaatcaacgactataggtctatttttcgaaattttatgcaattttgtgtcggttttatgttttggttgatccaaatttctgcaaagtggtatagtgg 44817555  T
Q  201 tccacccgaaaaatttaaata 221  Q
     ||| || |||||||||||||    
T  44817554 cccatcc-aaaaatttaaata 44817535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 43564471 - 43564593
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||||| |||||||  |||||| |||  || ||| ||||||||||||||||||||  |||||||| || ||||     
T  43564471 aaaaaatcaacgattataggtctattttgcgatattttatgcaattttgtgttggttttatgttttggttgatccaaattcctgcaaagtgttgtagtgc 43564570  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| || ||||||||||||||||    
T  43564571 cccatcc-aaaaatttaaataatt 43564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 22647164 - 22647296
Alignment:
Q  101 aaaaaattaacgaccataggtctatttt-gcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    ||||||| |||||| |||||| | |||| ||||||||||||  |||||| |||| || |||  |||| ||||||||||||||  ||||||||||| ||||    
T  22647164 aaaaaatcaacgactataggtttttttttgcgagattttatgcaattttgtgtc-gttttatatttttgttgatccaaattcatgcaaagtggtgtagtg 22647262  T
Q  200 gtccacccgaaaaatttaaataatttagttatagg 234  Q
    | |||||| |||||||||||||||| | |||||||    
T  22647263 gcccaccc-aaaaatttaaataattcaattatagg 22647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 31581840 - 31581723
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||  |||||| |||| || ||| ||||||||||||||||||||  | ||||| ||| | ||| |||| || ||||||    
T  31581840 ataggtctattttgctagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgtaaagtagtgtaatggcccactcg-aaaatt 31581742  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  31581741 taaataattcaattatagg 31581723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 133404 - 133521
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||||| |||  |||||| ||||||| |||||||||||||||||| |||  || |||||||| |  || || ||||||||||||||||||  |||||    
T  133404 aaaaaattagcgattataggtatattttgtgagattttatataattttgtgttggttttaggtttcgactggtctaaattctcgcaaagtggtttagtgg 133503  T
Q  201 tccacccgaaaaatttaa 218  Q
     |||||  ||||||||||    
T  133504 cccacctaaaaaatttaa 133521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 2655015 - 2654883
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| |||| |||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| ||||     
T  2655015 aaaaaatcaacgattatagatctagtttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtga 2654916  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||| ||| |||||||||||| || | |||||||    
T  2654915 cccatccg-aaaatttaaatagttcaattatagg 2654883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 44817527 - 44817438
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccac 205  Q
    ||||||||||| |||||||||||||| ||||||||||| || |||| ||| | |||||||||||||  ||||| ||||| ||||| ||||    
T  44817527 ataggtctattctgcgagattttatacaattttatgtcggttttagatttcgattgatccaaattcctgcaaattggtgtagtggcccac 44817438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 18668982 - 18669119
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttata----taattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaa 196  Q
    |||||||||||||  ||||||||| ||||||||||||||||    ||||||| |||| ||   |||||| |||| ||| |||||  | |||||| ||| |    
T  18668982 aaaaaattaacgattataggtctactttgcgagattttatacaattaattttgtgtcggtgacaggtttcggttaatctaaatttccacaaagtagtgta 18669081  T
Q  197 gtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    || ||||||||| ||||||||||| ||| | |||||||    
T  18669082 gtcgtccacccgcaaaatttaaattattcaattatagg 18669119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 18707730 - 18707867
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttata----taattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaa 196  Q
    |||||||||||||  ||||||||| ||||| ||||||||||    ||||||| |||| ||   |||||| || | |||||||||  |||||||||||| |    
T  18707730 aaaaaattaacgattataggtctactttgcaagattttatacaattaattttgtgtcggtgacaggtttcgggtaatccaaatttccgcaaagtggtgta 18707829  T
Q  197 gtggtccacccgaaaaatttaaataatttagttatagg 234  Q
    || | ||||||| ||||||||||| ||| | |||||||    
T  18707830 gtcgcccacccgcaaaatttaaattattcaattatagg 18707867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 19653749 - 19653669
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattc 181  Q
    ||||||| |||||  ||||||||||||||  |||||||||  |||||| |||| || ||| ||||||||||||||||||||    
T  19653749 aaaaaatcaacgattataggtctattttgttagattttatgcaattttgtgtcggttttatgttttggttgatccaaattc 19653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 52581509 - 52581631
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| | |||||||  | |||| |||| || | | ||||| ||||||||||||||  ||||||||||| ||| |    
T  52581509 aaaaaatcaacgattataggtctattttgcaatattttatggagttttgtgtcggtttcatgttttagttgatccaaattcctgcaaagtggtgtagtcg 52581608  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| || ||||||||||||||||    
T  52581609 cccatcc-aaaaatttaaataatt 52581631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 26653217 - 26653108
Alignment:
Q  125 ttttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataatt 224  Q
    ||||||||||||||||| || ||| |||| || |||  |||||| | |||||||||     |||||||||  ||||| || |||||||||||||||||||    
T  26653217 ttttgcgagattttatacaactttgtgtcggttttaaattttggctaatccaaatttctataaagtggtgtggtggttcatccgaaaaatttaaataatt 26653118  T
Q  225 tagttatagg 234  Q
    || |||||||    
T  26653117 taattatagg 26653108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 9046186 - 9046134
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtc 153  Q
    |||||||||||||  |||| ||||||||||||||||||||| |||||| ||||    
T  9046186 aaaaaattaacgattatagatctattttgcgagattttatacaattttgtgtc 9046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 5734113 - 5734193
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattc 181  Q
    ||||||||||||| |||| ||||| ||||| ||| |||||| ||||||   || || |||||||| ||||||| |||||||    
T  5734113 aaaaaattaacgatcatatgtctactttgcaagactttatacaattttgcatcggttttaggtttcggttgattcaaattc 5734193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 18714834 - 18714878
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataatt 146  Q
    ||||||||||||  ||||||||| |||||||||||||||| ||||    
T  18714834 aaaaattaacgattataggtctactttgcgagattttatacaatt 18714878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 2660815 - 2660707
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  2660815 ataggtctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatt 2660716  T
Q  216 taaataatt 224  Q
    |||||||||    
T  2660715 taaataatt 2660707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 26468630 - 26468747
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| ||||| ||||| | | ||||||||||    
T  26468630 ataggtctattttgcgagattttatacaattttatgtcagttttaggtttcggttgatccaaattcccgcaaattggtgtagtggacaaaccgaaaaatt 26468729  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  26468730 taaataattcaattatag 26468747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 12698678 - 12698783
Alignment:
Q  119 ggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaa 218  Q
    ||||||||||| ||||||||||| |||||||||||  | |||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  12698678 ggtctattttgtgagattttatacaattttatgtcgcttttaggtttcggttgatccaaattcccgcaaattggtgtagtggtccacccgaaaaatttaa 12698777  T
Q  219 ataatt 224  Q
    ||||||    
T  12698778 ataatt 12698783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 7021999 - 7022116
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| | |||| ||||| ||||| ||||||| ||||||    
T  7021999 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccacaaattggtgtagtggcccacccg-aaaatt 7022097  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  7022098 taaataattcaattatagg 7022116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 12996467 - 12996584
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||||||| |||| |||||||||| |||||||||||| ||||||||| ||| ||||||    
T  12996467 atagatctattttgcgagattttatacaattttatgtcggttttaggtttcggttaatccaaattcccgcaaagtggtgtagtggtccatccg-aaaatt 12996565  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  12996566 taaataattcaattatagg 12996584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 15469271 - 15469388
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| |||| |||| ||||| |||||| ||||| ||||| ||||||||||||||    
T  15469271 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggtt-atcccaattcccgcaaattggtgtagtggcccacccgaaaaatt 15469369  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  15469370 taaataattcaattatagg 15469388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 34127679 - 34127797
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    ||||||||||||||| |||||||||| ||||||||||| || |||||||| |||||||||||||||  ||||| ||||| ||||| ||||||| ||||||    
T  34127679 ataggtctattttgcaagattttatacaattttatgtcggttttaggtttcggttgatccaaattcctgcaaattggtgtagtggcccacccggaaaatt 34127778  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  34127779 taaataattcaattatagg 34127797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 7021871 - 7022003
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||| ||  |||||||||||||||||||||||||  |||||| ||||||| ||| ||||||||||||||||||||  |||||||| || |||||    
T  7021871 aaaaaattaatgattataggtctattttgcgagattttatgcaattttgtgtcagttttatgttttggttgatccaaattcctgcaaagtgatgtagtgg 7021970  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  7021971 cccacccg-aaaatttaaataattcaattatagg 7022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 34023519 - 34023411
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| |||||||| |||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||  ||||||||||||||    
T  34023519 atagatctattttacgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtgaaccacccgaaaaatt 34023420  T
Q  216 taaataatt 224  Q
    |||||||||    
T  34023419 taaataatt 34023411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 11450478 - 11450364
Alignment:
Q  119 ggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaa 218  Q
    |||||||||| |||||||||||| ||||||||||| || |||||||| ||||||||||||||| |||||| ||||| ||||| ||||||| |||||||||    
T  11450478 ggtctattttacgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaattggtgtagtggcccacccg-aaaatttaa 11450380  T
Q  219 ataatttagttatagg 234  Q
    |||||| | |||||||    
T  11450379 ataattcaattatagg 11450364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 23259045 - 23258927
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||| ||| || |||| ||||||||||||||||||   ||||| ||||| ||||||||| ||||||||||    
T  23259045 ataggtctattttgtgagattttatacaattttacgtcggttttagcttttggttgatccaaatttctgcaaattggtgtagtggtccaaccgaaaaatt 23258946  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  23258945 taaataattcaattatagg 23258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 15469143 - 15469275
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||||| |||||||||  |||||| |||| || ||| |||||| |||||||||||||  ||||||||||| |||||    
T  15469143 aaaaaatcaacgattataggtctattttgcaagattttatgcaattttgtgtcggttttatgttttgattgatccaaattcctgcaaagtggtgtagtgg 15469242  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||| ||||||||||||||| | |||||||    
T  15469243 tccacccg-aaaatttaaataattcaattatagg 15469275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 23258931 - 23258814
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||| ||| || |||| ||||||||||||||||||   ||||| ||||| ||||||||| ||||||||||    
T  23258931 ataggtctattttgtgagattttatacaattttacgtcggttttagcttttggttgatccaaatttctgcaaattggtgtagtggtccaaccgaaaaatt 23258832  T
Q  216 taaataatttagttatag 233  Q
    ||||||||| | ||||||    
T  23258831 taaataattcaattatag 23258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 12698563 - 12698670
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||| ||| ||||||    
T  12698563 ataggtctattttgcgagattttatacaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccatccg-aaaatt 12698661  T
Q  216 taaataatt 224  Q
    |||||||||    
T  12698662 taaataatt 12698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 24130221 - 24130113
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||| |||||||  |||||||| | || |||||||| ||||||||||||||| |||| | ||||| ||||| ||||||||||||||    
T  24130221 ataggtctattttgcgagtttttatacgattttatgccggttttaggtttcggttgatccaaattcccgcatattggtgtagtggcccacccgaaaaatt 24130122  T
Q  216 taaataatt 224  Q
    |||||||||    
T  24130121 taaataatt 24130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 8560607 - 8560725
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||||||||  |||||| ||||| |||||| |||| ||||||||    
T  8560607 atagatctattttgtgagattttatacaattttacgtcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggtgcacctgaaaaatt 8560706  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  8560707 taaataattcaattatagg 8560725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 24130326 - 24130217
Alignment:
Q  124 attttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataat 223  Q
    |||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  24130326 attttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggtccacccg-aaaatttaaataat 24130228  T
Q  224 ttagttatagg 234  Q
    | | |||||||    
T  24130227 tcaattatagg 24130217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 24635447 - 24635329
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| || ||||  || || |||||||| ||||||||||||||  |||||| ||||| |||||||||||| |||||||    
T  24635447 ataggtctattttgtgagattttatacaaatttaaatcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggtccacccaaaaaatt 24635348  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  24635347 taaataattcaattatagg 24635329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 2660943 - 2660811
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||||||||||||||||||  |||||| | || || ||| ||||||| ||||||||||||  ||||||||||| |||||    
T  2660943 aaaaaatcaacgattataggtctattttgcgagattttatgcaattttgtatcggttttatgttttggatgatccaaattcctgcaaagtggtgtagtgg 2660844  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  2660843 cccacccg-aaaatttaaataattcaattatagg 2660811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 9079160 - 9079028
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  9079160 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 9079061  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
     ||||||| ||||||||||||||| | |||||||    
T  9079060 cccacccg-aaaatttaaataattcaattatagg 9079028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 7536511 - 7536643
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    ||||||||||||  |||| |||||||||   ||||||||| |||||| ||||| | |||||||| || ||||| ||||||||||||||||||| | ||      
T  7536511 aaaaattaacgattatagatctattttgtaggattttatacaattttgtgtcaattttaggtttcggctgatctaaattctcgcaaagtggtgtaatgac 7536610  T
Q  202 ccacccgaaaaatttaaataatttagttatagg 234  Q
    ||||||||||||||||||||||| | |||||||    
T  7536611 ccacccgaaaaatttaaataattcaattatagg 7536643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 34023647 - 34023516
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||||||| ||||||||||||||||||| |||| || ||| ||||||||||||| |||||   ||||||||||| ||||     
T  34023647 aaaaaatcaacgattataggtctattttacgagattttatataattttgtgtcggttttatgttttggttgatctaaatttctgcaaagtggtgtagtgt 34023548  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     |||||| |||||||||||||||| | ||||||    
T  34023547 cccaccc-aaaaatttaaataattcaattatag 34023516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 16461382 - 16461267
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtc-agtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaa 218  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||  |||||| ||||||| |||||| ||||| ||||| | | |||||||||||||    
T  16461382 gtctattttgcgagattttatataattttatgtcgggttttaggtttcagttgattcaaattcccgcaaattggtgtagtggcctatccgaaaaatttaa 16461283  T
Q  219 ataatttagttatagg 234  Q
    |||||| | |||||||    
T  16461282 ataattcaattatagg 16461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 26468517 - 26468634
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| |||||| |||| || |||   |||| |||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  26468517 ataggtctattttgcgagattttatacaattttgtgtcggttttataatttgcttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 26468615  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  26468616 taaataattcaattatagg 26468634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 14883137 - 14883021
Alignment:
Q  117 taggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattt 216  Q
    ||||||||||||  ||||||||||| || |||||||| |  |||| ||| ||||||||||||||| ||||| | |||| |||| ||||||||||||||||    
T  14883137 taggtctattttttgagattttatacaaatttatgtcggctttagatttcggttgatccaaattcccgcaa-gaggtgtagtgatccacccgaaaaattt 14883039  T
Q  217 aaataatttagttatagg 234  Q
    |||||||||| |||||||    
T  14883038 aaataatttaattatagg 14883021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 24635575 - 24635443
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||||||||| |||||||||||||||  |||||| | |  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  24635575 aaaaaatcaacgattataggtctaatttgcgagattttatgcaattttgtattggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 24635476  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||| ||| ||||||||||||||| | |||||||    
T  24635475 tccatccg-aaaatttaaataattcaattatagg 24635443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 9079032 - 9078925
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||| | | ||||||| ||| || |||||||| ||||||||||||||  |||||| ||||| ||||| ||||||||||||||    
T  9079032 ataggtctattttgtgagatttaa-acaattttacgtcggttttaggtttcggttgatccaaatttccgcaaattggtgtagtggaccacccgaaaaatt 9078934  T
Q  216 taaataatt 224  Q
    |||||||||    
T  9078933 taaataatt 9078925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 13405468 - 13405345
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||| |||| || |||||||| | ||||||||||||| |   |||||  | | |||    
T  13405468 aaaaaattaacgattataggtctattttgcgagattttatacaattttgtgtcggttttaggtttcgattgatccaaattcccatgaagtgaagtaatgg 13405369  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
     ||| |||||||||||||||||||    
T  13405368 cccatccgaaaaatttaaataatt 13405345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 31969086 - 31968964
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttgg-ttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||||||||||| |||||||||| ||||||||||||||||           |||| |||||||| || |||||| ||||||  ||||||||||| |||||    
T  31969086 aaaaattaacgatcataggtctactttgcgagattttata-----------cagttttaggtttcgggttgatctaaattcctgcaaagtggtgtagtgg 31968998  T
Q  201 tccacccgaaaaatttaaataatttagttatagg 234  Q
    |||||||||||||||||||||||||| |||||||    
T  31968997 tccacccgaaaaatttaaataatttaattatagg 31968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 10290511 - 10290644
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttt-tggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    ||||||||||||| |||||||||| |||||||||||||||| || ||| |||| || ||||||||   |||||||||||||   ||||| ||||| ||||    
T  10290511 aaaaaattaacgatcataggtctactttgcgagattttatacaa-tttgtgtcggtgttaggtttcaagttgatccaaatttctgcaaaatggtgtagtg 10290609  T
Q  200 gtccacccgaaaaatttaaataatttagttatagg 234  Q
    | ||| ||||||||||||||||||| | |||||||    
T  10290610 gcccatccgaaaaatttaaataattcaattatagg 10290644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 8560479 - 8560610
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||||||||  ||||||||||||||  |||||| | |  || ||| ||||||||||||||||||||  ||||||||||| |||||    
T  8560479 aaaaaatcaacgattataggtctaaattgcgagattttatgcaattttgtattggttttatgttttggttgatccaaattcctgcaaagtggtgtagtgg 8560578  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  8560579 cccacccg-aaaatttaaataattcaattatag 8560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 14883267 - 14883144
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataatttta-tgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    ||||||| |||||  ||| |||||||| ||||||||||||| ||||||  ||||  | |||||||| ||||||||||||||| |||||||||||| ||||    
T  14883267 aaaaaatcaacgattataagtctatttcgcgagattttatacaattttggtgtcgattttaggtttcggttgatccaaattcccgcaaagtggtgtagtg 14883168  T
Q  200 gtccacccgaaaaatttaaataatt 224  Q
    | ||| || ||||||||||||||||    
T  14883167 gccca-ccaaaaaatttaaataatt 14883144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 11450589 - 11450487
Alignment:
Q  121 tctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaat 220  Q
    ||||||||||||||| ||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||| ||| |||||||||||    
T  11450589 tctattttgcgagatcttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccatccg-aaaatttaaat 11450491  T
Q  221 aatt 224  Q
    ||||    
T  11450490 aatt 11450487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 12996359 - 12996458
Alignment:
Q  123 tattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataa 222  Q
    ||||||||||||||||||| |||||| | || || |||||||| | ||||| ||||||| | |||||||||| ||||  |||||||||||||||||||||    
T  12996359 tattttgcgagattttatacaattttgtatcggttttaggtttcgattgatgcaaattccctcaaagtggtgtagtgacccacccgaaaaatttaaataa 12996458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 16461514 - 16461392
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  ||| | |||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||   |||||| ||| |||||    
T  16461514 aaaaaatcaacgattataagcctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattccttcaaagttgtgtagtgg 16461415  T
Q  201 tccacccgaaaaatttaaataatt 224  Q
    ||||| || |||||||||||||||    
T  16461414 tccactcg-aaaatttaaataatt 16461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 34127570 - 34127683
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaa 219  Q
    |||||||||||||||||||||| |||||| | || || ||| | ||||||||||||||||||  ||||||||||| | ||  |||||| |||||||||||    
T  34127570 gtctattttgcgagattttatacaattttgtatcggttttatgatttggttgatccaaattcctgcaaagtggtgtaatgccccaccc-aaaaatttaaa 34127668  T
Q  220 taatttagttatagg 234  Q
    ||||| | |||||||    
T  34127669 taattcaattatagg 34127683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 31489894 - 31489991
Alignment:
Q  120 gtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaattta 217  Q
    |||||||||| |||||||||||||||||| | ||  | ||| ||||| ||| |||||||||||| |||||||||| |||| |||| || |||||||||    
T  31489894 gtctattttgtgagattttatataattttgtatcgattttaagttttagttaatccaaattctcacaaagtggtgtagtgatccatccaaaaaattta 31489991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 23259147 - 23259041
Alignment:
Q  127 ttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatttaaataattta 226  Q
    ||||||||||||||  |||||| | || || ||| |||||||||||| ||||||   ||||| || || ||||| |||||| |||||||||||||||| |    
T  23259147 ttgcgagattttatgcaattttctatcggttttatgttttggttgattcaaatttctgcaaaatgttgtagtggcccaccc-aaaaatttaaataattca 23259049  T
Q  227 gttatagg 234  Q
     |||||||    
T  23259048 attatagg 23259041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 65229 - 65347
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||| ||||| |||||| ||||| ||||| ||||||||||||||    
T  65229 ataggtctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatcccaattcccgcaaattggtgtagtggcccacccgaaaaatt 65328  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  65329 taaataattcaattatagg 65347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 65115 - 65233
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||||||| ||||| |||||| ||||| ||||| ||||||||||||||    
T  65115 ataggtctattttgtgagattttatacaattttatgtcggttttaggtttcggttgatcccaattcccgcaaattggtgtagtggcccacccgaaaaatt 65214  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  65215 taaataattcaattatagg 65233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 65002 - 65119
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||||||||||||||||||||||||  |||||| |||| || ||| ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||    
T  65002 ataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggttgatccaaattcctgcaaagtggtgtagtggcccacccg-aaaatt 65100  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  65101 taaataattcaattatagg 65119  T

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Target: scaffold0002 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 331953 - 332061
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| |||||||||||  | |||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  331953 atagatctattttgcgagattttatacaattttatgtcgattttaggtttcggttgatccaaattctcgcaaattggtgtagtggtccacccaaaaaatt 332052  T
Q  216 taaataatt 224  Q
    |||||||||    
T  332053 taaataatt 332061  T

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Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 331824 - 331956
Alignment:
Q  100 gaaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtg 199  Q
    |||||||| |||||  ||||||||||||||| |||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||| |||     
T  331824 gaaaaaatcaacgattataggtctattttgcaagattttatgcaattttgtatcggttttatgttttggttgatccaaattcctgcaaagtggtgtagta 331923  T
Q  200 gtccacccgaaaaatttaaataatttagttatag 233  Q
    ||||||||| ||||||||||||||| | ||||||    
T  331924 gtccacccg-aaaatttaaataattcaattatag 331956  T

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Target: scaffold0050 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 19099 - 19230
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| ||||| ||||||||||||||||||||||||||  |||||| |||| || ||| ||||||||| ||||||||||  ||||||||||| |||||    
T  19099 aaaaaatcaacgatcataggtctattttgcgagattttatgcaattttgtgtcggttttatgttttggtttatccaaattcctgcaaagtggtgtagtgg 19198  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||||||| ||||||||||||||| | ||||||    
T  19199 cccacccg-aaaatttaaataattcaattatag 19230  T

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Target: scaffold0050; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 234
Target Start/End: Original strand, 19227 - 19345
Alignment:
Q  116 ataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggtccacccgaaaaatt 215  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||    ||| ||||| ||||| ||||||||||||||    
T  19227 atagatctattttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattccaaaaaattggtgtagtggcccacccgaaaaatt 19326  T
Q  216 taaataatttagttatagg 234  Q
    ||||||||| | |||||||    
T  19327 taaataattcaattatagg 19345  T

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Target: scaffold0131 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 233
Target Start/End: Original strand, 11231 - 11362
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    ||||||| |||||  |||| | ||||||||||||||||||  |||||| | || || ||| ||||||||||||||||||||  ||||||||||  |||||    
T  11231 aaaaaatcaacgattatagatttattttgcgagattttatgcaattttgtatcggttttatgttttggttgatccaaattcgtgcaaagtggtatagtgg 11330  T
Q  201 tccacccgaaaaatttaaataatttagttatag 233  Q
     ||| || |||||||||||||||| | ||||||    
T  11331 cccatcc-aaaaatttaaataattcaattatag 11362  T

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Target: scaffold0131; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 11367 - 11431
Alignment:
Q  124 attttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaa 188  Q
    |||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| ||||||    
T  11367 attttgcgagattttatacaattttatgtcggttttaggtttcggttgatccaaattcccgcaaa 11431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 82949 - 82837
Alignment:
Q  101 aaaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtgg 200  Q
    |||| ||||||||| ||||||||||| |||||||||||||| | |||| |||| || |||| ||| ||  |||||||||   | |||||||| | |||||    
T  82949 aaaagattaacgactataggtctattatgcgagattttatacacttttgtgtcggttttagttttcggcagatccaaatctccccaaagtggcgtagtgg 82850  T
Q  201 tccacccgaaaaa 213  Q
    |||||||||||||    
T  82849 tccacccgaaaaa 82837  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 303922 - 303814
Alignment:
Q  102 aaaaattaacgaccataggtctattttgcgagattttatataattttatgtcagtattaggttttggttgatccaaattctcgcaaagtggtgaagtggt 201  Q
    ||||||||||||  | || | ||||||| ||||||||||| ||||||||||| || |||  ||| ||||||| ||||||  |  ||||||||| ||||||    
T  303922 aaaaattaacgattaaagatttattttgtgagattttatacaattttatgtcggttttaaatttcggttgattcaaatttccataaagtggtgtagtggt 303823  T
Q  202 ccacccgaa 210  Q
    ||| |||||    
T  303822 ccatccgaa 303814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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