View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20050_high_25 (Length: 242)
Name: NF20050_high_25
Description: NF20050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20050_high_25 |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 11018434 - 11018659
Alignment:
| Q |
1 |
tcttgatataccaacttactttttctacacttcaggagcttcaactcttgctgtttttcttcaacttccaaccattcatcaaagtaccacaaaatcgctt |
100 |
Q |
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| T |
11018434 |
tcttgatataccaacttactttttctacacttcaggagcttcaactcttgctgtttttcttcaacttccaaccattcatcaaagtaccacgaaatcgctt |
11018533 |
T |
|
| Q |
101 |
aaagagtttcacatgtatcctagaatccctgggctaccattggttcctatagttgatatgcccgatgaagtgaaggatcgcgagagtaaaagttacaagg |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
11018534 |
aaagagtttcacatgtatcctagaatccctgggttaccattggttcctatagttgatatgcccgatgaagtgaaggatcgtgagagtaaaagttacaagg |
11018633 |
T |
|
| Q |
201 |
ttttcttagatatggcgacaagtatg |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
11018634 |
ttttcttagatatggcgacaagtatg |
11018659 |
T |
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