View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20051_high_3 (Length: 426)
Name: NF20051_high_3
Description: NF20051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20051_high_3 |
 | |
|
| [»] scaffold0889 (1 HSPs) |
| | |
|
| [»] scaffold0870 (1 HSPs) |
| | |
|
| [»] scaffold1029 (2 HSPs) |
| | |
|
| [»] scaffold1033 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 364; Significance: 0; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 18 - 417
Target Start/End: Original strand, 28586219 - 28586618
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28586219 |
tgtctcagcaagcggaatgcaagtgcaacttcatagatttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagcttttcaagag |
28586318 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28586319 |
ccactttgatctcctcagcaaaatagtgttcaatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
28586418 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaaatacattt |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28586419 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaatattgaaataaaaatacattt |
28586518 |
T |
|
| Q |
318 |
ctttgatacaactgtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttataactggaaatatt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28586519 |
ctttgatacaactgtactccaattaaattacttaccattctggaaattaatgctttgatagtaaaacagacttgattcagtgtttataactggaaatatt |
28586618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 18 - 410
Target Start/End: Original strand, 28580062 - 28580467
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||| |||||||||| | |||||||| |
|
|
| T |
28580062 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctacttacaaaatcaataggattgttgttcaatatcaaatgtagtttttcaagag |
28580161 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| |||||||||||||| | ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28580162 |
ccactttgatctcctcggtaaagtagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatcttcgattttaacaagttt |
28580261 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaaa------- |
310 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
28580262 |
cttataaacttgcttgaatatcaaagcttgtttgacatatgtaacgtcctgaaaatgtaaaagtgtagattgatcagaacattgcaataaaaagatattc |
28580361 |
T |
|
| Q |
311 |
tacattt------ctttgatacaactgtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttat |
404 |
Q |
| |
|
|| |||| || ||| | |||||| |||||||| || |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28580362 |
taaatttagaacaattgtatatatttgtacttcaattaaaatacttaccattctggaaattaatgctttgataataaaacagacttgattcagtgtttat |
28580461 |
T |
|
| Q |
405 |
aactgg |
410 |
Q |
| |
|
| |||| |
|
|
| T |
28580462 |
agctgg |
28580467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 28575009 - 28575299
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||| | ||||||||||||| |||||||||||| |||||||| |
|
|
| T |
28575009 |
tgtctcagcaagcggaatgcaagtgaaaattcatagagttcatggctattcacaaaatcaataggattggtgttcaatatcaaatgtagcttttcaagag |
28575108 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||| |
|
|
| T |
28575109 |
ccactttgatctcctcagcaaaatagtgttcaatgccaaacctttggatgatatcgatcaaataaaaactctccatcgaatcttcgattttaacaagttt |
28575208 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaa |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
28575209 |
cttataaacttgcttaaatatcaaagcttgcttaacatatgtaacatcctgaaaaagtcaaagtgcagattgatcagaacattgaaataaa |
28575299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 308
Target Start/End: Original strand, 28568166 - 28568459
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaatt---gaattggtgttcaatgtcaaatgtagctgttcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||| || | ||||| |
|
|
| T |
28568166 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcacaaaatcaattataggattggtgttcaatatcaaatgcagattttcaa |
28568265 |
T |
|
| Q |
115 |
gagcgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaag |
214 |
Q |
| |
|
|||| ||||| || ||||||||||||||||| | || |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
28568266 |
gagccacttttatttcctcagcaaaatagtgctcaataccaaacctttggataatatccatcaaataaaaactctccatcggatcttcgattttaacaag |
28568365 |
T |
|
| Q |
215 |
tttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaa |
308 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
28568366 |
tttcttataaacttgcttaaatattaaagcttgtttgacatatacaacatcctaaaattgtaagagtgcagattgatcagaatattgaaataaa |
28568459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 26316067 - 26316358
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||| | | ||||||||||||| || ||| ||||| ||||||| |
|
|
| T |
26316067 |
tgtctgagcaagcggaatgcaagtgcaacttcgtagagttcatggatactcataaaatcattaggattggtgttcaatatcgaatatagcttctcaagag |
26316166 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| ||||||||||| ||| |||| ||||||| ||| || ||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
26316167 |
ccactttgatctcttcaacaaagtagtgttcaatgttaagcctttggatgatatcgatcaaataaaaactctccatcggatattcgattttaacaagttt |
26316266 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaa |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
26316267 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagaatgatgagaacattgaaataaaa |
26316358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 20618413 - 20618704
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || ||||| ||||| | | | ||||||| |
|
|
| T |
20618413 |
tgtctgagcaaacggaatgcaagtgcaacttcatagagttcatggctactaacaaaatcaattggattgctgctcaatatcaaaaattgtttctcaagag |
20618512 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| |||||||| |||||| |||| ||||||| || |||| ||||||||| || || ||||||| |||| | || | ||||||||| | |||||||||| |
|
|
| T |
20618513 |
ccactttgatttcctcaacaaagtagtgttcaataccaagcctttggatgatgtcaatcaaatgaaaattctcagttggatcttcactagtaacaagttt |
20618612 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaaa |
310 |
Q |
| |
|
||| | |||||||||| | ||||||||||| |||||||| || ||||||||||||||| || | | |||||||| |||||||||||||||| |
|
|
| T |
20618613 |
cttgtgaacttgcttacacatcaaagcttgcttgacataaatagcatcctgaaaatgtagaacag-atattgatcataacattgaaataaaaa |
20618704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 28575338 - 28575418
Alignment:
| Q |
330 |
tgtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttataactgg |
410 |
Q |
| |
|
|||||| || ||||| || |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||| |
|
|
| T |
28575338 |
tgtacttcagttaaaatacttaccattctagaaattaatgctttgataataaaacagacttgattcggtgtttatagctgg |
28575418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 26316391 - 26316465
Alignment:
| Q |
330 |
tgtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttat |
404 |
Q |
| |
|
|||||| |||||||| || |||||||||| ||||||||| |||||| |||||||| |||||||||||||||||| |
|
|
| T |
26316391 |
tgtacttcaattaaaatacttaccattctataaattaatgatttgatagtaaaacaaacttgattcagtgtttat |
26316465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 28568503 - 28568554
Alignment:
| Q |
331 |
gtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaa |
382 |
Q |
| |
|
||||| |||||||| || |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
28568503 |
gtacttcaattaaaatacttaccattctagaaattaatgctttgatagtaaa |
28568554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 405
Target Start/End: Original strand, 24071690 - 24072082
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaattgaattggtgttcaatgtcaaatgtagctgttcaagag |
117 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||| ||||||| | | |||||||| |
|
|
| T |
24071690 |
tgtctgagcaagcggaatgcaagtgcaacttgatagagttcatggctactcacaaaatcaataggattggtgttcaatatcaaatgcaagttttcaagag |
24071789 |
T |
|
| Q |
118 |
cgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagttt |
217 |
Q |
| |
|
| |||||||||| ||| |||| ||||||| ||| ||||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
24071790 |
ccgctttgatctcgtcaacaaagtagtgttcaatgtcaaacttttggatgatatcgatcaaataaaaacactccatcggatcttcgattttaacaagttt |
24071889 |
T |
|
| Q |
218 |
cttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaaatacattt |
317 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| || | |
|
|
| T |
24071890 |
ctcataaacttgcttaaatatcaaagcttgtttgacataagtaacatcctgaaaatgtaaaagtgcatattgatcagaacattaaaatatgaatatatat |
24071989 |
T |
|
| Q |
318 |
ctttgat-----acaactgtactccaattaaattaattaccattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttata |
405 |
Q |
| |
|
| || ||| |||| | |||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
24071990 |
tgtaaattcagaacatatgtatatctattaaaatacttaccattctggaaattaatgctttgatagtaaaacagacttgattcaatgtttata |
24072082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0889 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0889
Description:
Target: scaffold0889; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 4719 - 4431
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaatt---gaattggtgttcaatgtcaaatgtagctgttcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||| || | ||||| |
|
|
| T |
4719 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcacaaaatcaattataggattggtgttcaatatcaaatgcagattttcaa |
4620 |
T |
|
| Q |
115 |
gagcgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaag |
214 |
Q |
| |
|
|||| || || || ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4619 |
gagccacatttatttcctcagcaaaatagtgttcaataccaaacctttggataatatcgatcaaataaaaactctccatgggatcttcgattttaacaag |
4520 |
T |
|
| Q |
215 |
tttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaat |
305 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4519 |
tttcttataaactttcttaaatatcaaagcttgtttgacatataaaacatcctaaaaatgtaaaagtgc--attgatcagaacattgaaat |
4431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0870 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0870
Description:
Target: scaffold0870; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 4923 - 4635
Alignment:
| Q |
18 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcgcaaaatcaatt---gaattggtgttcaatgtcaaatgtagctgttcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| ||||||| || | ||||| |
|
|
| T |
4923 |
tgtctcagcaagcggaatgcaagtgcaacttcatagagttcatggctactcacaaaatcaattataggattggtgttcaatatcaaatgcagattttcaa |
4824 |
T |
|
| Q |
115 |
gagcgactttgatctcctcagcaaaatagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaag |
214 |
Q |
| |
|
|||| || || || ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4823 |
gagccacatttatttcctcagcaaaatagtgttcaataccaaacctttggataatatcgatcaaataaaaactctccatgggatcttcgattttaacaag |
4724 |
T |
|
| Q |
215 |
tttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaat |
305 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4723 |
tttcttataaactttcttaaatatcaaagcttgtttgacatataaaacatcctaaaaatgtaaaagtgc--attgatcagaacattgaaat |
4635 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1029 (Bit Score: 141; Significance: 9e-74; HSPs: 2)
Name: scaffold1029
Description:
Target: scaffold1029; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 141 - 309
Target Start/End: Complemental strand, 3324 - 3156
Alignment:
| Q |
141 |
tagtgttggatgccaaacctttggataatatcgatcaaataaaaactttccatcggatcttcaattttaacaagtttcttataaacttgcttaaatatca |
240 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3324 |
tagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatca |
3225 |
T |
|
| Q |
241 |
aagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcagaacattgaaataaaa |
309 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
3224 |
aagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgcagattgatcagtactttgaaataaaa |
3156 |
T |
|
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Target: scaffold1029; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 3126 - 3041
Alignment:
| Q |
330 |
tgtactccaattaaattaattaccattcttgaaattaatgctttgattg-----taaaacagacttgattcagtgtttataactgg |
410 |
Q |
| |
|
|||||| |||||||| || |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
3126 |
tgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctgg |
3041 |
T |
|
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Target: scaffold1033 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold1033
Description:
Target: scaffold1033; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 3270 - 3156
Alignment:
| Q |
195 |
ggatcttcaattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtgcagattgatcag |
294 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3270 |
ggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgcagattgatcag |
3171 |
T |
|
| Q |
295 |
aacattgaaataaaa |
309 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
3170 |
tactttgaaataaaa |
3156 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1033; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 3126 - 3041
Alignment:
| Q |
330 |
tgtactccaattaaattaattaccattcttgaaattaatgctttgattg-----taaaacagacttgattcagtgtttataactgg |
410 |
Q |
| |
|
|||||| |||||||| || |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
3126 |
tgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctgg |
3041 |
T |
|
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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 405
Target Start/End: Complemental strand, 34812992 - 34812938
Alignment:
| Q |
351 |
accattcttgaaattaatgctttgattgtaaaacagacttgattcagtgtttata |
405 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
34812992 |
accattctgaaaattaatgctttgataataaaacagacttgattcggtgtttata |
34812938 |
T |
|
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