View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20055_low_16 (Length: 251)
Name: NF20055_low_16
Description: NF20055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20055_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 44489908 - 44489687
Alignment:
| Q |
19 |
catgactttgctagattctcaattcaaaaatccatgtttcagtcccaaaagtttttgaactcattgaacttctatcttgagtctacttttaccaaagagg |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489908 |
catgactttgctagattctcaattcaaaaatccatgtttcagtcccaaaaatttttgaactcattgaacttctatcttgagtctacttttaccaaagaga |
44489809 |
T |
|
| Q |
119 |
caataaatgctctcaaagattgtttatttctctcccaactcacctcccaatacttatcaaaatccaattatgttgcactcaaaaatactaatgaaactct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489808 |
caataaatgctctcaaagattgtttatttctctcccaactcacctcacaatacttatcaaaatccaattatgttgcactcaaaaatactaatgaaactct |
44489709 |
T |
|
| Q |
219 |
ctacacctcccaagttgatgat |
240 |
Q |
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|||||||||||||||||||||| |
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| T |
44489708 |
ctacacctcccaagttgatgat |
44489687 |
T |
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