View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20056_low_23 (Length: 277)
Name: NF20056_low_23
Description: NF20056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20056_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 45795658 - 45795910
Alignment:
| Q |
16 |
attatagacaatggctaatgtaatccttgtaagaagaattggtattttcaaagaatacgccaaaatctcataactatttgttcttaccaattcatttaca |
115 |
Q |
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| T |
45795658 |
attatagacaatggctaatgtaatccttgtaagaagaattggtattttcaaagaatacgccaaaatctcataactatttgttcttaccaattcatttaca |
45795757 |
T |
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| Q |
116 |
caagtttgttgatatgaaatgatagcacttaggctattcataacatcatctggatatatttggaatatatcttcaatagacaaatttgccagcttataca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
45795758 |
caagtttgttgatatgaaatgatagcacttaggctattcataacatcatctggatatatttggaatatatcttcaatagacgaatttgccagcttataca |
45795857 |
T |
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| Q |
216 |
aagattctagttcatcttttcccatattcaacaattccaaacaatctctatat |
268 |
Q |
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| T |
45795858 |
aagattctagttcatcttttcccatattcaacaattccaaacaatctctatat |
45795910 |
T |
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