View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20057_high_29 (Length: 239)

Name: NF20057_high_29
Description: NF20057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20057_high_29
NF20057_high_29
[»] chr1 (8 HSPs)
chr1 (107-236)||(23694218-23694347)
chr1 (145-236)||(2050425-2050516)
chr1 (145-236)||(36869684-36869775)
chr1 (145-236)||(7477509-7477600)
chr1 (145-236)||(49790198-49790289)
chr1 (107-215)||(45503117-45503225)
chr1 (107-219)||(45505495-45505607)
chr1 (107-219)||(48959741-48959854)
[»] chr2 (22 HSPs)
chr2 (107-236)||(1917796-1917925)
chr2 (107-236)||(27998588-27998717)
chr2 (107-236)||(28089318-28089447)
chr2 (107-219)||(36438613-36438725)
chr2 (145-236)||(181130-181221)
chr2 (145-236)||(979095-979186)
chr2 (145-236)||(2445232-2445323)
chr2 (145-236)||(2445839-2445930)
chr2 (145-236)||(2446446-2446537)
chr2 (145-236)||(13902458-13902549)
chr2 (114-219)||(1502962-1503067)
chr2 (107-219)||(21589609-21589721)
chr2 (145-236)||(6121696-6121787)
chr2 (107-219)||(205859-205971)
chr2 (145-236)||(2297907-2297995)
chr2 (107-219)||(19820922-19821034)
chr2 (107-219)||(19841143-19841255)
chr2 (107-202)||(4999809-4999904)
chr2 (107-219)||(42110469-42110582)
chr2 (137-175)||(1917782-1917820)
chr2 (137-175)||(27998574-27998612)
chr2 (137-175)||(28089304-28089342)
[»] chr7 (13 HSPs)
chr7 (107-236)||(3065596-3065725)
chr7 (107-236)||(31099816-31099945)
chr7 (107-236)||(45114132-45114261)
chr7 (145-236)||(17694175-17694266)
chr7 (145-236)||(7885863-7885954)
chr7 (145-236)||(27713183-27713274)
chr7 (114-219)||(26163309-26163414)
chr7 (107-219)||(5092584-5092696)
chr7 (107-219)||(32658338-32658450)
chr7 (107-174)||(29956217-29956284)
chr7 (178-236)||(29956170-29956228)
chr7 (137-174)||(29956261-29956298)
chr7 (139-175)||(3065584-3065620)
[»] chr4 (11 HSPs)
chr4 (107-236)||(21380953-21381082)
chr4 (107-236)||(16907284-16907413)
chr4 (145-236)||(21584365-21584456)
chr4 (107-219)||(8959724-8959836)
chr4 (107-219)||(53287326-53287438)
chr4 (145-236)||(14147071-14147162)
chr4 (107-219)||(30389906-30390018)
chr4 (107-202)||(29362092-29362187)
chr4 (107-176)||(28386635-28386704)
chr4 (107-188)||(42346787-42346868)
chr4 (171-236)||(28384146-28384211)
[»] chr3 (13 HSPs)
chr3 (107-236)||(31485211-31485340)
chr3 (107-236)||(858374-858503)
chr3 (107-219)||(49564428-49564540)
chr3 (145-236)||(4586346-4586437)
chr3 (145-236)||(26944860-26944951)
chr3 (107-219)||(11825505-11825617)
chr3 (107-219)||(35714678-35714790)
chr3 (114-219)||(38661314-38661419)
chr3 (107-219)||(36089431-36089543)
chr3 (145-236)||(12258742-12258833)
chr3 (107-219)||(33004855-33004968)
chr3 (178-236)||(13457528-13457586)
chr3 (178-236)||(16648501-16648559)
[»] chr8 (6 HSPs)
chr8 (107-236)||(23823073-23823202)
chr8 (107-236)||(19959520-19959649)
chr8 (107-219)||(22731305-22731417)
chr8 (178-236)||(18488571-18488629)
chr8 (178-236)||(408778-408836)
chr8 (107-161)||(18488518-18488572)
[»] chr6 (6 HSPs)
chr6 (107-236)||(2278650-2278779)
chr6 (145-236)||(33048792-33048883)
chr6 (107-219)||(33005740-33005852)
chr6 (107-219)||(29370483-29370596)
chr6 (107-204)||(29373038-29373136)
chr6 (114-196)||(24457699-24457781)
[»] chr5 (9 HSPs)
chr5 (145-236)||(34758262-34758353)
chr5 (145-236)||(39875096-39875187)
chr5 (145-236)||(12652216-12652307)
chr5 (145-236)||(20108052-20108143)
chr5 (145-236)||(23181001-23181092)
chr5 (145-236)||(23185268-23185359)
chr5 (107-219)||(10039380-10039493)
chr5 (178-236)||(3610747-3610805)
chr5 (178-236)||(30093327-30093385)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 23694218 - 23694347
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23694218 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttgctaataatgttactaaaagccatgttactaaaatgcttcagtaacacagc 23694317  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| |||||||||||    
T  23694318 catgctactaaattgattcagcaacacaaa 23694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 2050425 - 2050516
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2050425 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 2050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 36869684 - 36869775
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  36869684 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 36869775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 7477600 - 7477509
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  7477600 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 7477509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 49790198 - 49790289
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  49790198 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 49790289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 45503117 - 45503225
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  45503117 ttgttagtaataatattactaaaagtgtcaccaaaaggtagtaattgttactaataatgttaccaaaagccatgttactaaaatatttcagtaacacagc 45503216  T
Q  207 catgttact 215  Q
    |||| ||||    
T  45503217 catgctact 45503225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 45505495 - 45505607
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  45505495 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 45505594  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  45505595 aatgctactaaat 45505607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 48959854 - 48959741
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacag 205  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||     
T  48959854 ttgttagtaataatgttactaaaagtgtcaccaaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaa 48959755  T
Q  206 ccatgttactaaat 219  Q
    | ||| ||||||||    
T  48959754 caatggtactaaat 48959741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 1917796 - 1917925
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  1917796 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttaccaaaagccatgttactaaaatgtttcagtaacacagc 1917895  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| |||||||||||    
T  1917896 catgctactaaattgattcagcaacacaaa 1917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 27998588 - 27998717
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||    
T  27998588 ttgttagtaataatgttagtaaaagtgtcaccaaaaggtagtaattgttactaataatgtaaccaaaagccatgttactaaaatgtttcagtaacacagc 27998687  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| |||| ||||||    
T  27998688 catgctactaaattgattcagcatcacaaa 27998717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 28089318 - 28089447
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||    
T  28089318 ttgttagtaataatgttagtaaaagtgtcaccaaaaggtagtaattgttactaataatgtaaccaaaagccatgttactaaaatgtttcagtaacacagc 28089417  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| |||| ||||||    
T  28089418 catgctactaaattgattcagcatcacaaa 28089447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 36438613 - 36438725
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||    
T  36438613 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacagc 36438712  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  36438713 aatgctactaaat 36438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 181221 - 181130
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  181221 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 181130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 979095 - 979186
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  979095 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 979186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 2445323 - 2445232
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  2445323 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 2445232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 2445930 - 2445839
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  2445930 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 2445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 2446537 - 2446446
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  2446537 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 2446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 13902549 - 13902458
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  13902549 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacagtcatgctactaaattgattcagcaacacaaa 13902458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 1503067 - 1502962
Alignment:
Q  114 taataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgtta 213  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||| ||| ||    
T  1503067 taataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgatactaaaatgcttcaataacacagcaatgcta 1502968  T
Q  214 ctaaat 219  Q
    ||||||    
T  1502967 ctaaat 1502962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 21589609 - 21589721
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  21589609 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacatc 21589708  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  21589709 aatgctactaaat 21589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 6121787 - 6121696
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  6121787 tagtaattgttacaaataatgttactaaaagccatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacgcaaa 6121696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 205971 - 205859
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||  | |||| ||| ||||||||||||||| |||||||||    
T  205971 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttaccagaagctatgctactaaaatgcttcaataacacagc 205872  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  205871 aatgctactaaat 205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 2297995 - 2297907
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2297995 tagtaattgttactaataatgttactaaaa---atgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 2297907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 19821034 - 19820922
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| |||| ||||||| |    
T  19821034 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctattaaaatgtttcaataacacaac 19820935  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  19820934 aatgctactaaat 19820922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 19841255 - 19841143
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| |||| ||||||| |    
T  19841255 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctattaaaatgtttcaataacacaac 19841156  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  19841155 aatgctactaaat 19841143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 4999809 - 4999904
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaaca 202  Q
    |||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||    
T  4999809 ttgttagtaataatgttactaaaagtgtcaccaaaaggcagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataaca 4999904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 42110469 - 42110582
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacag 205  Q
    |||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||||||     
T  42110469 ttgttagtaataatgttactaaaagtgtcacgaaaaaggtagtaattgttactaataaagttactaaaagctatgctactaaaatgcttcaataacacaa 42110568  T
Q  206 ccatgttactaaat 219  Q
    | ||| ||||||||    
T  42110569 caatgctactaaat 42110582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 1917782 - 1917820
Alignment:
Q  137 ccaaaaggtagtaattgttactaataatgttattaaaag 175  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  1917782 ccaaaaggtagtaattgttagtaataatgttactaaaag 1917820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 27998574 - 27998612
Alignment:
Q  137 ccaaaaggtagtaattgttactaataatgttattaaaag 175  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  27998574 ccaaaaggtagtaattgttagtaataatgttagtaaaag 27998612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 28089304 - 28089342
Alignment:
Q  137 ccaaaaggtagtaattgttactaataatgttattaaaag 175  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  28089304 ccaaaaggtagtaattgttagtaataatgttagtaaaag 28089342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 3065596 - 3065725
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3065596 ttgttagtaataatgttactaaaagtgccaccaaaaggtagtaattgttactaataatgttactaaaagccatgttactaaaatacttcagtaacacagc 3065695  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| || |||||||||| |||||||||||    
T  3065696 catgctattaaattgattcagcaacacaaa 3065725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 31099945 - 31099816
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |    
T  31099945 ttgttattaataatgttactaagagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacataac 31099846  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| | |||||||||    
T  31099845 catgctactaaattgattcaacaacacaaa 31099816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 45114261 - 45114132
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| |    
T  45114261 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactgataatgttactaaaagctatgctactaaaatgcttcagtaacacaac 45114162  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| || ||||||||    
T  45114161 tatgctactaaattgattcagaaacacaaa 45114132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 17694266 - 17694175
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17694266 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 17694175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 7885954 - 7885863
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  7885954 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 7885863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 27713274 - 27713183
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  27713274 tagtaattgttactaataatgttactaaaaaccatgttactaaaatgcttcagtaacacagccatgctactaaattgatttagcaacacaaa 27713183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 26163414 - 26163309
Alignment:
Q  114 taataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgtta 213  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||| ||| ||    
T  26163414 taataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacagcaatgcta 26163315  T
Q  214 ctaaat 219  Q
    ||||||    
T  26163314 ctaaat 26163309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 5092696 - 5092584
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  5092696 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 5092597  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  5092596 aatgctactaaat 5092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 32658450 - 32658338
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||  | |||| ||| ||||||||||||||| |||||||||    
T  32658450 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaacaatgttaccataagctatgctactaaaatgcttcaataacacagc 32658351  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  32658350 aatgctactaaat 32658338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 29956284 - 29956217
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaa 174  Q
    |||||| ||||||||||||||||| |||  | |||||| ||||||||||||||||||||||| |||||    
T  29956284 ttgttagtaataatgttactaaaaatgtcactaaaaggaagtaattgttactaataatgttactaaaa 29956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 29956228 - 29956170
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||| ||| |||||||    
T  29956228 atgttactaaaatgtttcagtaacacaaccatgctactaaattgattcagctacacaaa 29956170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 29956298 - 29956261
Alignment:
Q  137 ccaaaaggtagtaattgttactaataatgttattaaaa 174  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  29956298 ccaaaaggtagtaattgttagtaataatgttactaaaa 29956261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 3065584 - 3065620
Alignment:
Q  139 aaaaggtagtaattgttactaataatgttattaaaag 175  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  3065584 aaaaggtagtaattgttagtaataatgttactaaaag 3065620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 21381082 - 21380953
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||    
T  21381082 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttctgtaacacagc 21380983  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| |||||||||||    
T  21380982 tatgctactaaattgattcagcaacacaaa 21380953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 16907413 - 16907284
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |    
T  16907413 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcagtaacacaac 16907314  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| || ||||||||    
T  16907313 tatgctactaaattgattcagaaacacaaa 16907284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 21584365 - 21584456
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21584365 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 21584456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 8959724 - 8959836
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  8959724 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattattactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 8959823  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  8959824 aatgatactaaat 8959836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 53287438 - 53287326
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  53287438 ttgttagtaataatgttactaaaagtgtcaccaaaaggtactaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 53287339  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  53287338 aatgctactaaat 53287326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 14147071 - 14147162
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||| |||||||||||    
T  14147071 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaacccagctactaaattgatttagcaacacaaa 14147162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 30389906 - 30390018
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||  | |||| ||| ||||||||||||||| |||||||||    
T  30389906 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaacaatgttaccataagctatgctactaaaatgcttcaataacacagc 30390005  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  30390006 aatgctactaaat 30390018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 29362092 - 29362187
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaaca 202  Q
    |||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||    
T  29362092 ttgttagtaataatgttactaaaagtgtcaccaaaaggcagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataaca 29362187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 28386704 - 28386635
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagc 176  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  28386704 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagc 28386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 42346868 - 42346787
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaa 188  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||  ||| |||||||    
T  42346868 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagttatgctactaaa 42346787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 28384211 - 28384146
Alignment:
Q  171 aaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||| ||| ||||||||||||||||||||||| | ||| ||||||||||||| || ||||||||    
T  28384211 aaaagctatgctactaaaatgcttcagtaacacaactatgctactaaattgattcagaaacacaaa 28384146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 31485340 - 31485211
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||    
T  31485340 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttctgtaacacagc 31485241  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| |||||||||||    
T  31485240 tatgctactaaattgattcagcaacacaaa 31485211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 858503 - 858374
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || |||||| ||||    
T  858503 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttaccaaaagtcatgttactaaaatgttttagtaactcagc 858404  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
    |||| ||||||||||||| |||||||||||    
T  858403 catgctactaaattgattcagcaacacaaa 858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 49564428 - 49564540
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||    
T  49564428 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacagc 49564527  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  49564528 aatgctactaaat 49564540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 4586437 - 4586346
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4586437 tagtaattgttactaataatgttactaaaagtcatgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 4586346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 26944951 - 26944860
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  26944951 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 26944860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 11825617 - 11825505
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  11825617 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 11825518  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  11825517 aatgctactaaat 11825505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 35714790 - 35714678
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  35714790 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 35714691  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  35714690 aatgctactaaat 35714678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 38661314 - 38661419
Alignment:
Q  114 taataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgtta 213  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||| ||| ||    
T  38661314 taataatgttactaaaagtgtcactaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacagcaatgcta 38661413  T
Q  214 ctaaat 219  Q
    ||||||    
T  38661414 ctaaat 38661419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 36089431 - 36089543
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||||||| ||| ||||||||||||||| |||||||||    
T  36089431 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagaaattgttactaataatattactaaaagctatgctactaaaatgcttcaataacacagc 36089530  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  36089531 aatgctactaaat 36089543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 12258833 - 12258742
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||    
T  12258833 tagtaattgttacaaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacgcaaa 12258742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 33004855 - 33004968
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacag 205  Q
    |||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||     
T  33004855 ttgttagtaataatgtgactaaaagtgtcacgaaaaaggtagtaattgttactaataatgttactaaaagctatgctactaacatgcttcaataacacaa 33004954  T
Q  206 ccatgttactaaat 219  Q
    | ||| ||||||||    
T  33004955 caatgctactaaat 33004968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 13457528 - 13457586
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  13457528 atgttactaaaatgcttcagtaacacagtcatgctactaaattgattcagcaacacaaa 13457586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 16648559 - 16648501
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  16648559 atgttactaaaatgcttcagtaacacagtcatgctactaaattgattcagcaacacaaa 16648501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 23823202 - 23823073
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |    
T  23823202 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcagtaacacaac 23823103  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| || ||||||||    
T  23823102 tatgctactaaattgattcagaaacacaaa 23823073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 19959649 - 19959520
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||| |    
T  19959649 ttgttagtaataatgttactaaaagtgtcagcaaaaggtagtaattgttactaataatgttactaaaagctatgctaccaaaatgcttcagtaacacaac 19959550  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| |||||||||||||  ||||||||||    
T  19959549 tatgctactaaattgattcggcaacacaaa 19959520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 22731305 - 22731417
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  22731305 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattattactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 22731404  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  22731405 aatgatactaaat 22731417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 18488571 - 18488629
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  18488571 atgttactaaaatgcttcagtaacacagccatgctactaaattgattcagcaacacaaa 18488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 408778 - 408836
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||    
T  408778 atgttactaaaatgcgtgagtaacacagccatgctactaaattgattcagcaacacaaa 408836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 18488518 - 18488572
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaat 161  Q
    |||||| ||||||||||||||||||| |  |||||||||||||||||||||||||    
T  18488518 ttgttagtaataatgttactaaaagtttcaccaaaaggtagtaattgttactaat 18488572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 2278779 - 2278650
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |    
T  2278779 ttgttagtaataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcagtaacacaac 2278680  T
Q  207 catgttactaaattgattgagcaacacaaa 236  Q
     ||| ||||||||||||| || ||||||||    
T  2278679 tatgctactaaattgattcagaaacacaaa 2278650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 33048792 - 33048883
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  33048792 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 33048883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 33005740 - 33005852
Alignment:
Q  107 ttgttactaataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagc 206  Q
    |||||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||| |    
T  33005740 ttgttagtaataatgttactaaaagtgtcaccaaaagatagtaattgttactaataatgttactaaaagctatgctactaaaatgcttcaataacacaac 33005839  T
Q  207 catgttactaaat 219  Q
     ||| ||||||||    
T  33005840 aatgctactaaat 33005852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 29370483 - 29370596
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacag 205  Q
    |||||| ||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| ||| ||||||||||||||| |||||||     
T  29370483 ttgttagtaataatgttactaaaagtgtcaccaaaaaggtagcaattgttaataataatgttactaaaagctatgctactaaaatgcttcaataacacaa 29370582  T
Q  206 ccatgttactaaat 219  Q
    | ||| ||||||||    
T  29370583 caatgctactaaat 29370596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 29373038 - 29373136
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacaca 204  Q
    |||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||| |||||||    
T  29373038 ttgttagtaataatgttactaaaagtgtcacgaaaaaggtagtaattgttactaataatgttactgaaagctatgctactaaaatgcttcaataacaca 29373136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 24457781 - 24457699
Alignment:
Q  114 taataatgttactaaaagtgtacccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttca 196  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||| ||| || ||||||||||||    
T  24457781 taataatgttactaaaagtgtcaccaaaaggtagtaattgttactaataatgttaccaaaagctatgctaataaaatgcttca 24457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 34758353 - 34758262
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  34758353 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 34758262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 39875187 - 39875096
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  39875187 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 39875096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 12652307 - 12652216
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  12652307 tagtaattgttactaataatgttactaaaagtcatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 12652216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 20108052 - 20108143
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||    
T  20108052 tagtaattgttactaataatgttactaaaagccatgttactaaaatgcttcagtaacatagtcatgctactaaattgattcagcaacacaaa 20108143  T

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Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 23181092 - 23181001
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  23181092 tagtaattgttactaataatgttactaaaagtcatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 23181001  T

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Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 23185359 - 23185268
Alignment:
Q  145 tagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  23185359 tagtaattgttactaataatgttactaaaagtcatgttactaaaatgcttcagtaacacaaccatgctactaaattgattcagcaacacaaa 23185268  T

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Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 10039493 - 10039380
Alignment:
Q  107 ttgttactaataatgttactaaaagtgt-acccaaaaggtagtaattgttactaataatgttattaaaagccatgttactaaaatgcttcagtaacacag 205  Q
    |||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||     
T  10039493 ttgttagtaataatgtgactaaaagtgtcacgaaaaaggtagtaattgttactaataatgttactaaaagctatgctactaacatgcttcaataacacaa 10039394  T
Q  206 ccatgttactaaat 219  Q
    | ||| ||||||||    
T  10039393 caatgctactaaat 10039380  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 3610747 - 3610805
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  3610747 atgttactaaaatgcttcagtaacacagtcatgctactaaattgattcagcaacacaaa 3610805  T

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Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 30093327 - 30093385
Alignment:
Q  178 atgttactaaaatgcttcagtaacacagccatgttactaaattgattgagcaacacaaa 236  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  30093327 atgttactaaaatgcttcagtaacacagtcatgctactaaattgattcagcaacacaaa 30093385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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