View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20058_high_53 (Length: 290)
Name: NF20058_high_53
Description: NF20058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20058_high_53 |
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Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 47036095 - 47036377
Alignment:
| Q |
1 |
tggagcatgaattctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036095 |
tggagcatgaattctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatc |
47036194 |
T |
|
| Q |
101 |
ccagggtaacacacaaatcagctcttaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaata |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036195 |
ccagggtaacacacaaatcagctcctaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaata |
47036294 |
T |
|
| Q |
201 |
gagataaattccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgcta |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036295 |
gagataaattccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgcta |
47036377 |
T |
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