View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20058_low_19 (Length: 451)

Name: NF20058_low_19
Description: NF20058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20058_low_19
NF20058_low_19
[»] chr6 (37 HSPs)
chr6 (18-451)||(14170300-14170733)
chr6 (310-446)||(22380701-22380837)
chr6 (310-451)||(25730852-25730993)
chr6 (310-451)||(27377460-27377601)
chr6 (310-451)||(27467817-27467958)
chr6 (310-451)||(32967939-32968080)
chr6 (310-451)||(17052116-17052257)
chr6 (310-451)||(18830303-18830444)
chr6 (310-451)||(26038281-26038422)
chr6 (310-451)||(27498370-27498511)
chr6 (310-451)||(34813156-34813297)
chr6 (310-439)||(20138897-20139026)
chr6 (310-439)||(22193843-22193972)
chr6 (310-451)||(1655448-1655589)
chr6 (310-451)||(3666093-3666234)
chr6 (310-451)||(4635593-4635734)
chr6 (310-451)||(9118485-9118626)
chr6 (310-451)||(12722829-12722970)
chr6 (310-451)||(12859598-12859739)
chr6 (310-451)||(14065488-14065629)
chr6 (310-451)||(20035898-20036039)
chr6 (310-451)||(22290652-22290793)
chr6 (310-451)||(25792381-25792522)
chr6 (310-451)||(32307039-32307180)
chr6 (312-451)||(26030089-26030228)
chr6 (310-451)||(16953675-16953816)
chr6 (310-431)||(18548047-18548168)
chr6 (310-451)||(18921497-18921638)
chr6 (310-431)||(26869469-26869590)
chr6 (310-451)||(27346412-27346553)
chr6 (310-451)||(27407152-27407293)
chr6 (310-446)||(21124152-21124288)
chr6 (310-437)||(13917913-13918040)
chr6 (310-437)||(25798515-25798642)
chr6 (310-435)||(19457406-19457531)
chr6 (310-437)||(22809742-22809869)
chr6 (310-342)||(25630669-25630701)
[»] chr8 (29 HSPs)
chr8 (313-451)||(24490673-24490811)
chr8 (310-451)||(6155780-6155921)
chr8 (310-451)||(19133394-19133535)
chr8 (310-451)||(19229492-19229633)
chr8 (310-451)||(22152307-22152448)
chr8 (313-437)||(22467174-22467298)
chr8 (310-451)||(246522-246663)
chr8 (310-451)||(809642-809783)
chr8 (310-451)||(3354653-3354794)
chr8 (310-451)||(9345812-9345953)
chr8 (310-451)||(15786728-15786869)
chr8 (310-451)||(19423039-19423180)
chr8 (310-451)||(21293018-21293159)
chr8 (310-451)||(26115985-26116126)
chr8 (310-451)||(29081105-29081246)
chr8 (310-451)||(32083714-32083855)
chr8 (310-451)||(36297640-36297781)
chr8 (310-437)||(22667773-22667900)
chr8 (310-437)||(23465346-23465473)
chr8 (310-451)||(13694588-13694729)
chr8 (310-431)||(25680026-25680147)
chr8 (310-451)||(44485828-44485969)
chr8 (310-451)||(3837563-3837704)
chr8 (310-451)||(19933833-19933974)
chr8 (310-451)||(36082635-36082776)
chr8 (310-437)||(16741387-16741514)
chr8 (312-342)||(20377938-20377968)
chr8 (310-342)||(17294214-17294246)
chr8 (310-342)||(24649612-24649644)
[»] chr2 (26 HSPs)
chr2 (310-451)||(19308426-19308567)
chr2 (310-451)||(4214564-4214705)
chr2 (310-451)||(9768766-9768907)
chr2 (310-451)||(9903576-9903717)
chr2 (310-451)||(21126945-21127086)
chr2 (310-451)||(24333752-24333893)
chr2 (310-451)||(28727320-28727461)
chr2 (310-451)||(34796220-34796361)
chr2 (310-451)||(40245277-40245418)
chr2 (310-451)||(43087366-43087507)
chr2 (310-451)||(10271655-10271796)
chr2 (310-451)||(11401175-11401316)
chr2 (310-451)||(22939660-22939801)
chr2 (310-451)||(29248889-29249030)
chr2 (310-451)||(39176097-39176238)
chr2 (310-451)||(43350071-43350212)
chr2 (310-451)||(21167907-21168048)
chr2 (310-451)||(27226107-27226248)
chr2 (310-451)||(35257673-35257814)
chr2 (310-451)||(35268298-35268439)
chr2 (312-451)||(22768434-22768573)
chr2 (310-437)||(18943745-18943872)
chr2 (310-437)||(24420962-24421089)
chr2 (310-440)||(28707108-28707238)
chr2 (310-342)||(22747640-22747672)
chr2 (310-342)||(24720008-24720040)
[»] scaffold0176 (1 HSPs)
scaffold0176 (310-451)||(13813-13954)
[»] chr5 (45 HSPs)
chr5 (310-451)||(20557853-20557994)
chr5 (310-451)||(5295156-5295297)
chr5 (310-451)||(13527927-13528067)
chr5 (310-451)||(20786151-20786292)
chr5 (310-451)||(22152622-22152763)
chr5 (310-451)||(24934267-24934408)
chr5 (310-451)||(27616786-27616927)
chr5 (310-451)||(34778002-34778143)
chr5 (310-451)||(39358602-39358743)
chr5 (310-451)||(40396468-40396609)
chr5 (310-446)||(31839532-31839668)
chr5 (310-451)||(1115916-1116057)
chr5 (310-451)||(6981911-6982052)
chr5 (310-451)||(9342061-9342202)
chr5 (310-451)||(14036148-14036289)
chr5 (310-451)||(14562667-14562808)
chr5 (310-451)||(15997910-15998051)
chr5 (310-451)||(17613168-17613309)
chr5 (310-451)||(17725024-17725165)
chr5 (310-451)||(21418982-21419123)
chr5 (310-451)||(21671958-21672099)
chr5 (310-451)||(22682222-22682363)
chr5 (310-451)||(23302383-23302524)
chr5 (310-451)||(23368042-23368183)
chr5 (310-451)||(23482816-23482957)
chr5 (310-451)||(23702886-23703027)
chr5 (310-451)||(24573178-24573319)
chr5 (310-451)||(24814019-24814160)
chr5 (310-451)||(24821490-24821631)
chr5 (310-451)||(27466268-27466409)
chr5 (310-451)||(30232040-30232181)
chr5 (310-451)||(31354640-31354781)
chr5 (310-451)||(35221608-35221749)
chr5 (310-451)||(36587131-36587272)
chr5 (310-451)||(36693804-36693945)
chr5 (310-451)||(39495501-39495642)
chr5 (310-451)||(42048886-42049027)
chr5 (310-437)||(23402031-23402158)
chr5 (310-451)||(14451626-14451767)
chr5 (310-451)||(15746075-15746216)
chr5 (310-431)||(27046851-27046972)
chr5 (310-451)||(37734581-37734722)
chr5 (310-437)||(34058053-34058180)
chr5 (310-437)||(17451326-17451453)
chr5 (310-342)||(19470113-19470145)
[»] chr4 (27 HSPs)
chr4 (310-451)||(4993782-4993923)
chr4 (310-451)||(4998415-4998556)
chr4 (310-451)||(18758477-18758618)
chr4 (310-451)||(14845931-14846072)
chr4 (310-451)||(16260592-16260733)
chr4 (310-451)||(19950382-19950523)
chr4 (310-451)||(22001144-22001285)
chr4 (310-451)||(24023456-24023597)
chr4 (310-451)||(27820918-27821059)
chr4 (310-451)||(40462732-40462873)
chr4 (310-451)||(455289-455430)
chr4 (310-451)||(10746585-10746726)
chr4 (310-451)||(10960354-10960495)
chr4 (310-431)||(16848718-16848839)
chr4 (310-451)||(17922825-17922966)
chr4 (310-451)||(30932477-30932618)
chr4 (310-451)||(36023018-36023159)
chr4 (310-451)||(43246144-43246285)
chr4 (310-451)||(49512263-49512404)
chr4 (310-451)||(55751239-55751380)
chr4 (310-440)||(19606894-19607024)
chr4 (310-451)||(10295398-10295539)
chr4 (310-451)||(16309839-16309980)
chr4 (310-451)||(24645058-24645199)
chr4 (310-451)||(27661339-27661480)
chr4 (310-437)||(3377657-3377784)
chr4 (310-437)||(15202804-15202931)
[»] chr3 (54 HSPs)
chr3 (310-451)||(9987870-9988011)
chr3 (310-451)||(16386871-16387012)
chr3 (310-451)||(29939537-29939678)
chr3 (310-451)||(29988691-29988832)
chr3 (310-451)||(1058293-1058434)
chr3 (310-451)||(6216035-6216176)
chr3 (310-451)||(7800044-7800185)
chr3 (310-451)||(10632806-10632947)
chr3 (310-451)||(12243542-12243683)
chr3 (310-451)||(13378650-13378791)
chr3 (310-451)||(13389244-13389385)
chr3 (310-451)||(20679180-20679321)
chr3 (310-437)||(16666439-16666566)
chr3 (313-451)||(19783138-19783276)
chr3 (310-451)||(510153-510294)
chr3 (310-451)||(4748432-4748573)
chr3 (310-451)||(5543004-5543145)
chr3 (310-451)||(5623379-5623520)
chr3 (310-451)||(5871679-5871820)
chr3 (310-431)||(6496345-6496466)
chr3 (310-451)||(8779376-8779517)
chr3 (310-451)||(9001772-9001913)
chr3 (310-451)||(12292172-12292313)
chr3 (310-451)||(15222058-15222199)
chr3 (310-451)||(16425140-16425281)
chr3 (310-451)||(17902072-17902213)
chr3 (310-451)||(23762007-23762148)
chr3 (310-451)||(24389501-24389642)
chr3 (310-451)||(24664583-24664724)
chr3 (310-451)||(29467188-29467329)
chr3 (310-451)||(41688362-41688503)
chr3 (311-451)||(13143848-13143988)
chr3 (310-437)||(5197814-5197941)
chr3 (312-451)||(37871176-37871315)
chr3 (312-451)||(37879694-37879833)
chr3 (310-451)||(5515386-5515527)
chr3 (310-451)||(17964414-17964555)
chr3 (310-451)||(28320221-28320362)
chr3 (310-451)||(38199365-38199506)
chr3 (310-451)||(39376797-39376938)
chr3 (310-437)||(9386580-9386707)
chr3 (310-437)||(11212091-11212218)
chr3 (310-451)||(4409004-4409145)
chr3 (310-451)||(11278368-11278509)
chr3 (310-431)||(13126404-13126525)
chr3 (310-431)||(14470334-14470455)
chr3 (310-451)||(17010847-17010988)
chr3 (310-451)||(17021653-17021794)
chr3 (310-451)||(15837955-15838096)
chr3 (306-342)||(17250853-17250889)
chr3 (310-342)||(29897686-29897718)
chr3 (310-437)||(1789868-1789995)
chr3 (367-431)||(14317059-14317123)
chr3 (310-342)||(30992452-30992484)
[»] scaffold0054 (1 HSPs)
scaffold0054 (212-446)||(73530-73761)
[»] chr1 (23 HSPs)
chr1 (312-451)||(7683805-7683944)
chr1 (310-451)||(4171957-4172098)
chr1 (310-451)||(5645733-5645874)
chr1 (310-451)||(12619181-12619322)
chr1 (310-451)||(12735183-12735324)
chr1 (310-444)||(19183572-19183706)
chr1 (310-451)||(5837859-5838000)
chr1 (310-451)||(7511929-7512070)
chr1 (310-451)||(7695500-7695641)
chr1 (310-451)||(21868318-21868459)
chr1 (310-451)||(36242459-36242600)
chr1 (310-451)||(38099740-38099881)
chr1 (310-451)||(47613961-47614102)
chr1 (310-451)||(51651902-51652043)
chr1 (310-451)||(19165680-19165820)
chr1 (310-431)||(21130352-21130473)
chr1 (310-451)||(35396525-35396666)
chr1 (310-451)||(35644067-35644208)
chr1 (310-437)||(21211720-21211847)
chr1 (310-451)||(149704-149845)
chr1 (310-451)||(3176256-3176397)
chr1 (310-437)||(20879041-20879168)
chr1 (367-440)||(20933927-20934000)
[»] scaffold0544 (1 HSPs)
scaffold0544 (313-451)||(5393-5531)
[»] scaffold0322 (1 HSPs)
scaffold0322 (310-451)||(4804-4945)
[»] scaffold0047 (2 HSPs)
scaffold0047 (310-451)||(42766-42907)
scaffold0047 (310-342)||(3180-3212)
[»] scaffold0012 (2 HSPs)
scaffold0012 (310-451)||(132374-132515)
scaffold0012 (310-431)||(214-335)
[»] chr7 (29 HSPs)
chr7 (310-451)||(171585-171726)
chr7 (310-451)||(463053-463194)
chr7 (310-451)||(2711680-2711821)
chr7 (310-451)||(6873297-6873438)
chr7 (310-451)||(9437959-9438100)
chr7 (310-451)||(20983952-20984093)
chr7 (310-451)||(22093836-22093977)
chr7 (313-451)||(9164262-9164400)
chr7 (310-451)||(1992251-1992392)
chr7 (310-451)||(4216703-4216844)
chr7 (310-451)||(8622058-8622199)
chr7 (310-451)||(9089929-9090070)
chr7 (310-451)||(17956181-17956322)
chr7 (310-451)||(24738796-24738937)
chr7 (310-451)||(26396161-26396302)
chr7 (310-451)||(26691809-26691950)
chr7 (310-451)||(40048171-40048312)
chr7 (312-451)||(18433220-18433359)
chr7 (310-451)||(8008133-8008274)
chr7 (310-451)||(11009882-11010023)
chr7 (310-451)||(15883889-15884030)
chr7 (310-451)||(25207117-25207258)
chr7 (312-446)||(13180183-13180317)
chr7 (279-431)||(5170245-5170395)
chr7 (380-449)||(20540451-20540520)
chr7 (310-451)||(42870543-42870684)
chr7 (310-437)||(14138342-14138469)
chr7 (310-342)||(13661161-13661193)
chr7 (367-437)||(4823822-4823892)
[»] scaffold0011 (1 HSPs)
scaffold0011 (310-440)||(130671-130801)
[»] scaffold0211 (1 HSPs)
scaffold0211 (310-451)||(5914-6055)
[»] scaffold0207 (1 HSPs)
scaffold0207 (310-451)||(25139-25280)
[»] scaffold0133 (2 HSPs)
scaffold0133 (310-451)||(35829-35970)
scaffold0133 (310-451)||(38354-38495)
[»] scaffold0105 (1 HSPs)
scaffold0105 (310-451)||(42978-43119)
[»] scaffold0022 (1 HSPs)
scaffold0022 (310-451)||(48961-49102)
[»] scaffold0017 (2 HSPs)
scaffold0017 (310-451)||(180178-180319)
scaffold0017 (310-410)||(49299-49399)
[»] scaffold0002 (1 HSPs)
scaffold0002 (311-451)||(160988-161128)
[»] scaffold0738 (1 HSPs)
scaffold0738 (312-451)||(17-156)
[»] scaffold0752 (1 HSPs)
scaffold0752 (313-431)||(6656-6774)
[»] scaffold0594 (1 HSPs)
scaffold0594 (310-440)||(3080-3210)
[»] scaffold0297 (1 HSPs)
scaffold0297 (310-451)||(21351-21492)
[»] scaffold0040 (1 HSPs)
scaffold0040 (310-451)||(74284-74425)
[»] scaffold0739 (1 HSPs)
scaffold0739 (310-437)||(6729-6856)
[»] scaffold0450 (1 HSPs)
scaffold0450 (304-431)||(3608-3735)
[»] scaffold0387 (1 HSPs)
scaffold0387 (304-431)||(11813-11940)
[»] scaffold0249 (1 HSPs)
scaffold0249 (310-437)||(10947-11074)
[»] scaffold0015 (1 HSPs)
scaffold0015 (310-437)||(161627-161754)
[»] scaffold1365 (1 HSPs)
scaffold1365 (310-431)||(676-797)
[»] scaffold0497 (1 HSPs)
scaffold0497 (310-451)||(5655-5796)
[»] scaffold0269 (1 HSPs)
scaffold0269 (310-451)||(11691-11832)
[»] scaffold0185 (1 HSPs)
scaffold0185 (310-451)||(13800-13941)
[»] scaffold0132 (2 HSPs)
scaffold0132 (310-451)||(20558-20699)
scaffold0132 (310-451)||(33759-33900)
[»] scaffold0122 (1 HSPs)
scaffold0122 (304-437)||(27725-27858)
[»] scaffold0863 (1 HSPs)
scaffold0863 (310-429)||(3483-3602)
[»] scaffold0201 (1 HSPs)
scaffold0201 (310-431)||(30826-30947)
[»] scaffold0906 (1 HSPs)
scaffold0906 (310-342)||(22-54)
[»] scaffold0010 (1 HSPs)
scaffold0010 (310-342)||(109608-109640)
[»] scaffold0183 (1 HSPs)
scaffold0183 (367-437)||(3176-3246)
[»] scaffold0161 (1 HSPs)
scaffold0161 (310-431)||(22227-22348)
[»] scaffold0056 (1 HSPs)
scaffold0056 (310-375)||(30290-30355)
[»] scaffold0007 (1 HSPs)
scaffold0007 (310-451)||(54733-54874)
[»] scaffold0411 (1 HSPs)
scaffold0411 (310-342)||(2528-2560)
[»] scaffold0302 (1 HSPs)
scaffold0302 (310-342)||(13216-13248)
[»] scaffold0004 (1 HSPs)
scaffold0004 (310-342)||(2874-2906)


Alignment Details
Target: chr6 (Bit Score: 386; Significance: 0; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 18 - 451
Target Start/End: Complemental strand, 14170733 - 14170300
Alignment:
Q  18 cacattagttattacctaacagataaagatcacattagaagcaaagaattaacatcataaaatcaccgtgtttttagtgggacagttggatataaagctg 117  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  14170733 cacattagttattacccaacagttaaagatcacattagaagcaaagaattaacatcataaaatcactgtgtttttagtgggacagctggatataaagctg 14170634  T
Q  118 ttacaaattattccacttataacacctatcagaagcaaagaatttcagactctggacttcagggtatgatgacttcagaagctggaattcatttagagtc 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14170633 ttacaaattattccacttataacacctattagaagcaaagaatttcagactctggacttcagagtatgatgacttcagaagctggaattcatttagagtc 14170534  T
Q  218 tcagtgaagagattctgatagacattttagcttctgaatctcattagattctgaattccttattcagaggcaatcaacattctgagataaattgcatgtt 317  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14170533 tcagtgaagagattctgatagactttttagcttctgaatctcatcagattctgaattccttattcagaggcaagcaacattctgagataaattgcatgtt 14170434  T
Q  318 caaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaaca 417  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14170433 caaatttttattaataaaatcaaatttatcttccgctaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaaca 14170334  T
Q  418 cctttttgaacatattctcttattaaatgatgtt 451  Q
    ||||||||||||||||||||||||||||||||||    
T  14170333 cctttttgaacatattctcttattaaatgatgtt 14170300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 446
Target Start/End: Original strand, 22380701 - 22380837
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| |||||| |||||||||||  | ||||||| || || ||||||||||| ||||    
T  22380701 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggttttgtgaatatatcagaccattgatgctctgtatcaatgaattgtatat 22380800  T
Q  410 ccagaacacctttttgaacatattctcttattaaatg 446  Q
    | ||||| |||||||||||||| ||||| || |||||    
T  22380801 ctagaactcctttttgaacataatctctgataaaatg 22380837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 25730993 - 25730852
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  25730993 tgcatgttcaaatttttcttaataaaatcaaatctttccacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 25730894  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  25730893 ctaaaactcctttttgaacataatctctgataaaatggtgtt 25730852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27377460 - 27377601
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   ||| ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27377460 tgcatgttcaaatttttcttaataaaatcaaatctttcaaccgataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27377559  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27377560 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 27377601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27467817 - 27467958
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   ||| ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27467817 tgcatgttcaaatttttcttaataaaatcaaatctttcaaccgataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27467916  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27467917 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 27467958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 32968080 - 32967939
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  32968080 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 32967981  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||||  |||||||||||||| ||||| || ||||| ||||    
T  32967980 ctagaatccctttttgaacatagtctctgataaaatggtgtt 32967939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 17052116 - 17052257
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||  |||||| | ||||||||| || |||||||||| || ||||||||||| ||||    
T  17052116 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttagaggttttgtaaatatatcagcccattgatgatctgtatcaatgaattgtatat 17052215  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| ||| |||||||||| ||||| || ||||| ||||    
T  17052216 ctaaaactcctctttgaacataatctctgataaaatggtgtt 17052257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 18830444 - 18830303
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  18830444 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 18830345  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  18830344 ctaaaactcctttttgaacataatctctgataaaatggtgtt 18830303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 26038281 - 26038422
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  26038281 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 26038380  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  26038381 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 26038422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27498370 - 27498511
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||| |||||||||||||||||||||||||||| | |   | | |||||||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27498370 tgcaagttcaaatttttcttaataaaatcaaatctttcaacagataagggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27498469  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27498470 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 27498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 34813297 - 34813156
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  34813297 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 34813198  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  34813197 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 34813156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 439
Target Start/End: Complemental strand, 20139026 - 20138897
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat-ttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaata 408  Q
    |||||||||||||||||| |||||||||||||| || || |  ||||| |||||| ||||||||||| || ||||||| ||| | ||||||||||| |||    
T  20139026 tgcatgttcaaatttttcctaataaaatcaaatcttttaata-gttaaaggttttgtgaatatatcagcccattgatgttcaatatcaatgaattgtata 20138928  T
Q  409 tccagaacacctttttgaacatattctctta 439  Q
    |||| | || |||||| |||||| |||||||    
T  20138927 tccaaagcatctttttcaacataatctctta 20138897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 22193843 - 22193972
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat-ttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaata 408  Q
    |||||||||||||||||| |||||||||||||| || || |  ||||| |||||| ||||||||||| || ||||||| ||| | ||||||||||| |||    
T  22193843 tgcatgttcaaatttttcctaataaaatcaaatcttttaata-gttaaaggttttgtgaatatatcagcccattgatgttcaatatcaatgaattgtata 22193941  T
Q  409 tccagaacacctttttgaacatattctctta 439  Q
    |||| | || |||||| |||||| |||||||    
T  22193942 tccaaagcatctttttcaacataatctctta 22193972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 1655448 - 1655589
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||  | ||||||||||| ||||    
T  1655448 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctctatatcaatgaattgtatat 1655547  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  1655548 ctaaaactcctttttgaacataatctctgataaaatggtgtt 1655589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 3666093 - 3666234
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  3666093 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 3666192  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  3666193 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 3666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4635593 - 4635734
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4635593 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4635692  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4635693 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 4635734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9118626 - 9118485
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9118626 tgcatgttcaaatttttctttataaaatcaaatatttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9118527  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9118526 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 9118485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 12722970 - 12722829
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12722970 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12722871  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12722870 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 12722829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 12859598 - 12859739
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||| ||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12859598 tgcatgttcaaatttttattaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12859697  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12859698 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 12859739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 14065629 - 14065488
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |     ||||| |||||| | ||||||||| || ||||||| || || ||||||||||| ||||    
T  14065629 tgcatgttcaaatttttctttataaaatcaaatctttcaattgttaaaggttttgtaaatatatcagcccattgatgctctgtatcaatgaattgtatat 14065530  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  14065529 ctaaaactcctttttgaacatagtctctgataaaatggtgtt 14065488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 20036039 - 20035898
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||  ||||    
T  20036039 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattatatat 20035940  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  20035939 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 20035898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 22290652 - 22290793
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22290652 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 22290751  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22290752 ctaaaaatcctttttgaacataatctctaataaaatggtgtt 22290793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 25792381 - 25792522
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  25792381 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 25792480  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  25792481 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 25792522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 32307180 - 32307039
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  32307180 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 32307081  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  32307080 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 32307039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 26030089 - 26030228
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    ||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| |||||     
T  26030089 catgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatatct 26030188  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||  |||||||||||||| ||||| || ||||| ||||    
T  26030189 aaaattcctttttgaacatagtctctgataaaatggtgtt 26030228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 16953675 - 16953816
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| ||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  16953675 tgcatgttcaagtttttcttaataaaatcaaatctttcaacagacaaaggttttgtcaatatatcagcccattgatgttcagtatcaatgaattgtatat 16953774  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  16953775 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 16953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 18548047 - 18548168
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||| || |||||||||||| | |   | ||||| || ||| | ||||||||| ||| |||||| ||||| ||||||||||| ||||    
T  18548047 tgcatgttcaaattttttttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagccttttgatgttcagtatcaatgaattgtatat 18548146  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||| ||||||||||||||    
T  18548147 ctaaaactcctttttgaacata 18548168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 18921638 - 18921497
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||| | ||||||||||| ||||    
T  18921638 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctcaatatcaatgaattgtatat 18921539  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||||||||    
T  18921538 ctaaaattcctttttgaacatagtctctgataaaatgatgtt 18921497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 26869469 - 26869590
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  26869469 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 26869568  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  26869569 ctaaaatccctttttgaacata 26869590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27346412 - 27346553
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || ||||||   ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27346412 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgcaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27346511  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27346512 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 27346553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27407152 - 27407293
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || ||||||   ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27407152 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgcaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27407251  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27407252 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 27407293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 446
Target Start/End: Original strand, 21124152 - 21124288
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||| |||||||||||||||||| | |     ||||| || ||| | ||||||||| || ||||||| || || ||||||||||| ||||    
T  21124152 tgcatgttcaaattattcttaataaaatcaaatctttcaatagttaaaggctttgtaaatatatcagcccattgatgctctgtatcaatgaattgtatat 21124251  T
Q  410 ccagaacacctttttgaacatattctcttattaaatg 446  Q
    | | ||| |||||||||||||| ||||| || |||||    
T  21124252 ctaaaactcctttttgaacataatctctgataaaatg 21124288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 13917913 - 13918040
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| ||||||||||||   |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13917913 tgcatgttcaaatttttcttgataaaatcaaatcattcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 13918012  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  13918013 ctaaaattcctttttgaacatagtctct 13918040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 25798515 - 25798642
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  25798515 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 25798614  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  25798615 ctaaaattcctttttgaacatagtctct 25798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 19457531 - 19457406
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||| ||||||||||| |||||| | |     ||||| || ||| | ||||||||| || ||| ||| ||||| ||||||||||| ||||    
T  19457531 tgcatgttcaaattcttcttaataaagtcaaatctttcaatagttaaaggctttgtaaatatatcagcccattaatgctcagtatcaatgaattgtatat 19457432  T
Q  410 ccagaacacctttttgaacatattct 435  Q
    | | ||| ||||||||||||||||||    
T  19457431 ctaaaactcctttttgaacatattct 19457406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 22809742 - 22809869
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |     ||||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22809742 tgcatgttcaaatttttctttataaaatcaaatctttccatagttaaaggcttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22809841  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
      | ||  |||||||||||||| |||||    
T  22809842 ttaaaattcctttttgaacataatctct 22809869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 25630669 - 25630701
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  25630669 tgcatgttcaaatttttctttataaaatcaaat 25630701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 24490811 - 24490673
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    |||||| |||||||||| |||||||||||| | | ||| |||||||||||| | ||||||||| || ||||||| ||| | |||||||||||||||||||    
T  24490811 atgttcgaatttttctttataaaatcaaatctttcttcagttaagggttttgtaaatatatcagcccattgatgttcaatatcaatgaattgaatatcca 24490712  T
Q  413 gaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     |||||||||||||||||| |||||||| ||||||||||    
T  24490711 aaacacctttttgaacatagtctcttataaaatgatgtt 24490673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 6155780 - 6155921
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6155780 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 6155879  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  6155880 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 6155921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 19133394 - 19133535
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19133394 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19133493  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  19133494 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 19133535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 19229492 - 19229633
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19229492 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19229591  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  19229592 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 19229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 22152448 - 22152307
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22152448 tgcatgttcaaatttttcttcataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 22152349  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  22152348 ctaaaactcctttttgaacataatctctgataaaatggtgtt 22152307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 22467298 - 22467174
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    ||||||||||||||||| |||||||||||| | |   | ||||| || ||  |||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  22467298 atgttcaaatttttctttataaaatcaaatctttccacagttaaaggcttactgaatatatcatcccattgatgttcagtatcaatgaattgtatatcca 22467199  T
Q  413 gaacacctttttgaacatattctct 437  Q
     ||  |||||||||||||| |||||    
T  22467198 aaattcctttttgaacatagtctct 22467174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 246522 - 246663
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  246522 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 246621  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  246622 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 809642 - 809783
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  809642 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 809741  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  809742 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 809783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 3354794 - 3354653
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  3354794 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 3354695  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  3354694 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 3354653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 9345812 - 9345953
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9345812 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9345911  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9345912 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 9345953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 15786869 - 15786728
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| | ||    
T  15786869 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtaaat 15786770  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  15786769 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 15786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 19423039 - 19423180
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19423039 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggtttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19423138  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  19423139 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 19423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 21293018 - 21293159
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| | |||||||| || || ||||||||||  ||||    
T  21293018 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcatattgatgctctgtatcaatgaattatatat 21293117  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  21293118 ctaaaactcctttttgaacataatctctgataaaatggtgtt 21293159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 26115985 - 26116126
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  26115985 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagctcattgatgttcagtatcaatgaattgtatat 26116084  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  26116085 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 26116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 29081105 - 29081246
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  29081105 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 29081204  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  29081205 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 29081246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 32083855 - 32083714
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  32083855 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 32083756  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  32083755 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 32083714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 36297640 - 36297781
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  36297640 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 36297739  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36297740 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 36297781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 22667773 - 22667900
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |     ||||| |||||  ||||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22667773 tgcatgttcaaatttttcttgataaaatcaaatctttccatagttaaaggtttagtgaatatatcagcccattgatgttcagtatcaatgaattgtatat 22667872  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  22667873 ctaaaattcctttttgaacatagtctct 22667900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 23465473 - 23465346
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23465473 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23465374  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  23465373 ctaaaattcctttttgaacatagtctct 23465346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 13694729 - 13694588
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  13694729 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 13694630  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  13694629 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 13694588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 25680147 - 25680026
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  25680147 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 25680048  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  25680047 ctaaaattcctttttgaacata 25680026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 44485828 - 44485969
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||| ||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  44485828 tgcatgttcaaattttttttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 44485927  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  44485928 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 44485969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 3837563 - 3837704
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||| ||| |||||||||||| | |     ||||| || ||| | ||||||||| || ||||||| ||| | ||||||||||| ||||    
T  3837563 tgcatgttcaaattttacttgataaaatcaaatctttcaatagttaaaggctttgtaaatatatcagcccattgatgctcaatatcaatgaattgtatat 3837662  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  3837663 ctaaaactcctttttgaacataatctctgataaaatgttgtt 3837704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 19933833 - 19933974
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19933833 tgcatgttcaaatttttctttataaaatcaaatctttccacagttaaaggcttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19933932  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | |  |  |||||||||||||| ||||| || ||||| ||||    
T  19933933 ctaatattcctttttgaacataatctctgataaaatggtgtt 19933974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 36082635 - 36082776
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  36082635 tgcatgttcaaatttttcttaataaagtcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 36082734  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36082735 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 36082776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 16741387 - 16741514
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |   ||| || ||| | ||||||||| || | ||||| ||||| ||||||||||| ||||    
T  16741387 tgcatgttcaaatttttctttataaaatcaaatctttcaacaaataaaggctttgtaaatatatcagcccactgatgctcagtatcaatgaattgtatat 16741486  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  16741487 ctaaaattcctttttgaacatagtctct 16741514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 342
Target Start/End: Complemental strand, 20377968 - 20377938
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||    
T  20377968 catgttcaaatttttcttaataaaatcaaat 20377938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 17294246 - 17294214
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  17294246 tgcatgttcaaatttttctttataaaatcaaat 17294214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 24649612 - 24649644
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  24649612 tgcatgttcaaatttttctttataaaatcaaat 24649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 19308567 - 19308426
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19308567 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggttttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 19308468  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  19308467 ctaaaactcctttttgaacataatctctgataaaatggtgtt 19308426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4214564 - 4214705
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4214564 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4214663  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4214664 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4214705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9768907 - 9768766
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9768907 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9768808  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9768807 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 9768766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9903717 - 9903576
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9903717 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9903618  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9903617 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 9903576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 21127086 - 21126945
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  21127086 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 21126987  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  21126986 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 21126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 24333893 - 24333752
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24333893 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24333794  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24333793 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 24333752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 28727461 - 28727320
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  28727461 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 28727362  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  28727361 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 28727320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 34796361 - 34796220
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  34796361 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 34796262  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  34796261 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 34796220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 40245277 - 40245418
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  40245277 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 40245376  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  40245377 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 40245418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 43087366 - 43087507
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  43087366 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 43087465  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  43087466 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 43087507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 10271655 - 10271796
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  10271655 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 10271754  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  10271755 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 10271796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 11401316 - 11401175
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  11401316 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 11401217  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  11401216 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 11401175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 22939801 - 22939660
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22939801 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22939702  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22939701 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 22939660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 29248889 - 29249030
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| || |    
T  29248889 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatgt 29248988  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  29248989 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 29249030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 39176238 - 39176097
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  39176238 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 39176139  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  39176138 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 39176097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 43350071 - 43350212
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  43350071 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 43350170  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  43350171 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 43350212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 21168048 - 21167907
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||| |||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  21168048 tgcatgtttaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 21167949  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | |  |  |||||||||||||| ||||| || ||||| ||||    
T  21167948 ctaagattcctttttgaacatagtctctgataaaatggtgtt 21167907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27226107 - 27226248
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  27226107 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 27226206  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27226207 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 27226248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 35257673 - 35257814
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  35257673 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 35257772  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35257773 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 35268298 - 35268439
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  35268298 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 35268397  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35268398 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35268439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 22768434 - 22768573
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    |||| ||||||||||||| |||||||||||| | |     | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| |||||     
T  22768434 catggtcaaatttttcttgataaaatcaaatctttccaaagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatatct 22768533  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | || ||||||||||||||| ||||| || ||||| ||||    
T  22768534 aaaaaacctttttgaacataatctctgataaaatggtgtt 22768573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 18943745 - 18943872
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |  |||| || ||  | ||||||||| |||||||||| ||||| ||||||||||| ||||    
T  18943745 tgcatgttcaaatttttctttataaaatcaaatatttccactattaaaggcttagtaaatatatcagcctattgatgttcagtatcaatgaattgtatat 18943844  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  | |||||||||||| |||||    
T  18943845 ctaaaattcatttttgaacataatctct 18943872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 24421089 - 24420962
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || | ||||| ||||| ||||||||||| ||||    
T  24421089 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccactgatgctcagtatcaatgaattgtatat 24420990  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  24420989 ctaaaattcctttttgaacatagtctct 24420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 28707238 - 28707108
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| |||||||| |||||||||||| | |   | | ||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  28707238 tgcatgttcaattttttctttataaaatcaaatattttcacagataaaggcttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 28707139  T
Q  410 ccagaacacctttttgaacatattctcttat 440  Q
    | | ||  |||||||||||||| ||||||||    
T  28707138 ctaaaattcctttttgaacatagtctcttat 28707108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 22747672 - 22747640
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    ||||| |||||||||||||||||||||||||||    
T  22747672 tgcatattcaaatttttcttaataaaatcaaat 22747640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 24720008 - 24720040
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  24720008 tgcatgttcaaatttttctttataaaatcaaat 24720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 13813 - 13954
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| |||   | ||||| |||||  ||||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13813 tgcatgttcaaatttttctttataaaatcaaatatatccacagttaaaggtttagtgaatatatcagcccattgatgttcagtatcaatgaattgtatat 13912  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  13913 ctaaaattcctttttgaacatagtctctaataaaatggtgtt 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 20557994 - 20557853
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||||| ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  20557994 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttataaatatatcagcccattgatgttcagtatcaatgaattgtatat 20557895  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  20557894 ctaaaattcctttttgaacataatctctgataaaatggtgtt 20557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 5295156 - 5295297
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5295156 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5295255  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5295256 ctaaaatccctttttgaacataatctctgataaaatggtgtt 5295297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 13527927 - 13528067
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| ||||||||||||||  |  | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13527927 tgcatgttcaaatttttcttgataaaatcaaattttcaa-cagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 13528025  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  13528026 ctataactcctttttgaacataatctctgataaaatggtgtt 13528067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 20786292 - 20786151
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  20786292 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 20786193  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  20786192 ctaaaattcctttttgaacataatctctgataaaatggtgtt 20786151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 22152763 - 22152622
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22152763 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22152664  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22152663 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 22152622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 24934267 - 24934408
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24934267 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24934366  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24934367 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24934408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27616786 - 27616927
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27616786 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27616885  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27616886 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 27616927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 34778143 - 34778002
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  34778143 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 34778044  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  34778043 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 34778002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 39358743 - 39358602
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  39358743 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 39358644  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  39358643 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 39358602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 40396609 - 40396468
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  40396609 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 40396510  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  40396509 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 40396468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 446
Target Start/End: Complemental strand, 31839668 - 31839532
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  31839668 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 31839569  T
Q  410 ccagaacacctttttgaacatattctcttattaaatg 446  Q
    | | ||  |||||||||||||| ||||| || |||||    
T  31839568 ctaaaatccctttttgaacatagtctctgataaaatg 31839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 1115916 - 1116057
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||||| |||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  1115916 tgcatgttcaaatttttcttaataaaattaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 1116015  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  1116016 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 1116057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 6982052 - 6981911
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6982052 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 6981953  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  6981952 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 6981911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9342202 - 9342061
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9342202 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9342103  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9342102 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 9342061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 14036289 - 14036148
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  14036289 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 14036190  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  14036189 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 14036148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 14562667 - 14562808
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  14562667 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 14562766  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  14562767 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 14562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 15997910 - 15998051
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  15997910 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 15998009  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
      | ||  |||||||||||||| ||||| || ||||| ||||    
T  15998010 ttaaaatccctttttgaacatagtctctgataaaatggtgtt 15998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 17613309 - 17613168
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  17613309 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 17613210  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  17613209 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 17613168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 17725165 - 17725024
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  17725165 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 17725066  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  17725065 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 17725024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 21418982 - 21419123
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| |||||||| || ||||    
T  21418982 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaaatgtatat 21419081  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  21419082 ctaaaactcctttttgaacataatctctgataaaatggtgtt 21419123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 21672099 - 21671958
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| |||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  21672099 tgcatgttcaagtttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 21672000  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  21671999 ctaaaactcctttttgaacataatctctgataaaatggtgtt 21671958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 22682363 - 22682222
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22682363 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22682264  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22682263 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 22682222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 23302524 - 23302383
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23302524 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23302425  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  23302424 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 23302383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 23368183 - 23368042
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23368183 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23368084  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  23368083 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 23368042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 23482816 - 23482957
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| || || ||||||||||  ||||    
T  23482816 tgcatgttcaaatttttcttaataaaatcaaatcttttaacagttaaaggctttgtaaatatatcagcccattgatgctctgtatcaatgaattatatat 23482915  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  23482916 ctaaaactcctttttgaacataatctctgataaaatggtgtt 23482957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 23703027 - 23702886
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23703027 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23702928  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  23702927 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 23702886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 24573319 - 24573178
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24573319 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24573220  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24573219 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 24814160 - 24814019
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24814160 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24814061  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24814060 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24814019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 24821490 - 24821631
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24821490 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24821589  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24821590 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24821631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 27466409 - 27466268
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27466409 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27466310  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27466309 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 27466268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 30232040 - 30232181
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  30232040 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 30232139  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  30232140 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 30232181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 31354781 - 31354640
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  31354781 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 31354682  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  31354681 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 31354640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 35221749 - 35221608
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  35221749 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 35221650  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35221649 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35221608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 36587131 - 36587272
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  36587131 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 36587230  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36587231 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 36587272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 36693945 - 36693804
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  36693945 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 36693846  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36693845 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 36693804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 39495501 - 39495642
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  39495501 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 39495600  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  39495601 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 39495642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 42049027 - 42048886
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  42049027 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 42048928  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  42048927 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 42048886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 23402158 - 23402031
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23402158 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23402059  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  23402058 ctaaaattcctttttgaacatagtctct 23402031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 14451626 - 14451767
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  14451626 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 14451725  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  14451726 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 14451767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 15746216 - 15746075
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  15746216 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 15746117  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  15746116 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 15746075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 27046851 - 27046972
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27046851 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27046950  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  27046951 ctaaaattcctttttgaacata 27046972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 37734581 - 37734722
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  37734581 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 37734680  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  37734681 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 37734722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 34058180 - 34058053
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  34058180 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcaacccattgatgctcagtatcaatgaattgtatat 34058081  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  34058080 ctaaaattcctttttgaacatagtctct 34058053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 17451326 - 17451453
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||| | ||||| ||||||||||| ||||    
T  17451326 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccattgacgctcagtatcaatgaattgtatat 17451425  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  17451426 ctaaaattcctttttgaacatagtctct 17451453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 19470145 - 19470113
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  19470145 tgcatgttcaaatttttctttataaaatcaaat 19470113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 4993923 - 4993782
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||||||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4993923 tgcatgttcaaatttttcttaataaaatcaaatatttcaacagataagggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4993824  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4993823 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4993782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4998415 - 4998556
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||||||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4998415 tgcatgttcaaatttttcttaataaaatcaaatatttcaacagataagggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4998514  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4998515 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4998556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 18758618 - 18758477
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||||||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  18758618 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataagggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 18758519  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  18758518 ctaaaatccctttttgaacatagtctctaataaaatggtgtt 18758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 14846072 - 14845931
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  14846072 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 14845973  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  14845972 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 14845931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 16260592 - 16260733
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  16260592 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 16260691  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  16260692 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 16260733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 19950523 - 19950382
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19950523 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19950424  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  19950423 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 19950382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 22001144 - 22001285
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22001144 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22001243  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22001244 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 22001285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 24023597 - 24023456
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24023597 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24023498  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24023497 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 24023456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 27821059 - 27820918
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  27821059 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 27820960  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27820959 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 27820918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 40462873 - 40462732
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  40462873 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagctcattgatgttcagtatcaatgaattgtatat 40462774  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    ||| ||  |||||||||||||| ||||| || ||||| ||||    
T  40462773 ccaaaattcctttttgaacatagtctctgataaaatggtgtt 40462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 455289 - 455430
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  455289 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 455388  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||   ||||||||||||| ||||| || ||||| ||||    
T  455389 ctaaaatctctttttgaacatagtctctgataaaatggtgtt 455430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 10746726 - 10746585
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  10746726 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 10746627  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  10746626 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 10746585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 10960495 - 10960354
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  10960495 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 10960396  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  10960395 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 10960354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 16848718 - 16848839
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || || || ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  16848718 tgcatgttcaaatttttctttataaaatcaaatatttcaactgttaaaggcttaataaatatatcagcccattgatgttcagtatcaatgaattgtatat 16848817  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||| ||||||||||||||    
T  16848818 ctaaaactcctttttgaacata 16848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 17922825 - 17922966
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   |   ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  17922825 tgcatgttcaaatttttcttaataaaatcaaatctttcaacatataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 17922924  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  17922925 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 17922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 30932618 - 30932477
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||| | ||||||||||| ||||    
T  30932618 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcaatatcaatgaattgtatat 30932519  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  30932518 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 30932477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 36023018 - 36023159
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  36023018 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 36023117  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36023118 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 36023159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 43246144 - 43246285
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| |  || ||||||||||| ||||    
T  43246144 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctatgtatcaatgaattgtatat 43246243  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  43246244 ctaaaactcctttttgaacataatctctgataaaatggtgtt 43246285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 49512263 - 49512404
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  49512263 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 49512362  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  49512363 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 49512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 55751380 - 55751239
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  55751380 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 55751281  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  55751280 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 55751239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 19607024 - 19606894
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  19607024 tgcatgttcaaatttttctttataaaatcaaatctttccacagttaaaggcttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 19606925  T
Q  410 ccagaacacctttttgaacatattctcttat 440  Q
    | | ||  |||||||||||||| ||||||||    
T  19606924 ctaaaattcctttttgaacatagtctcttat 19606894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 10295398 - 10295539
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| |||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  10295398 tgcatgttcaattttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 10295497  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  10295498 ctaaaattcctttttgaacatagtctctaataaaatggtgtt 10295539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 16309839 - 16309980
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  16309839 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 16309938  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  16309939 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 16309980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 24645058 - 24645199
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  24645058 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 24645157  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24645158 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24645199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 27661339 - 27661480
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  27661339 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 27661438  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  27661439 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 27661480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 3377657 - 3377784
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  3377657 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcaccccattgatgctcagtatcaatgaattgtatat 3377756  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  3377757 ctaaaattcctttttgaacatagtctct 3377784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 15202931 - 15202804
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  15202931 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 15202832  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  15202831 ctaaaattcctttttgaacataatctct 15202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9988011 - 9987870
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||||||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9988011 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataagggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9987912  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9987911 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 9987870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 16387012 - 16386871
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||||||||    
T  16387012 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgaatat 16386913  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  16386912 ctaaaattcctttttgaacataatctctgataaaatggtgtt 16386871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 29939678 - 29939537
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  29939678 tgcatgttcaaatttttcttaataaaatcaaatctttccacagataaaggttttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 29939579  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  29939578 ctaaaactcctttttgaacataatctctgataaaatggtgtt 29939537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 29988832 - 29988691
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  29988832 tgcatgttcaaatttttcttaataaaatcaaatctttccacagataaaggttttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 29988733  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  29988732 ctaaaactcctttttgaacataatctctgataaaatggtgtt 29988691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 1058293 - 1058434
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  1058293 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 1058392  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  1058393 ctaaaactcctttttgaacataatctctgataaaatgttgtt 1058434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 6216176 - 6216035
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6216176 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 6216077  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  6216076 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 6216035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 7800185 - 7800044
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  7800185 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 7800086  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  7800085 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 7800044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 10632947 - 10632806
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  10632947 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 10632848  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  10632847 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 10632806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 12243683 - 12243542
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12243683 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12243584  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12243583 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 12243542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 13378791 - 13378650
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13378791 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 13378692  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  13378691 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 13378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 13389385 - 13389244
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13389385 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 13389286  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  13389285 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 13389244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 20679321 - 20679180
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  20679321 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 20679222  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  20679221 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 20679180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 16666566 - 16666439
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||||||| | ||||||||||| ||||    
T  16666566 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgatcaatatcaatgaattgtatat 16666467  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||| |||||||||||||| |||||    
T  16666466 ctaaaactcctttttgaacatagtctct 16666439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 19783138 - 19783276
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    |||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||| |    
T  19783138 atgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatatcta 19783237  T
Q  413 gaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     ||  |||||||||||||| ||||| || ||||| ||||    
T  19783238 aaatccctttttgaacatagtctctgataaaatggtgtt 19783276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 510294 - 510153
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  510294 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 510195  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  510194 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 510153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4748432 - 4748573
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4748432 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4748531  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4748532 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 4748573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 5543145 - 5543004
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5543145 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5543046  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5543045 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 5543004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 5623520 - 5623379
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5623520 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5623421  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5623420 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 5623379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 5871820 - 5871679
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5871820 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5871721  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5871720 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 5871679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 6496466 - 6496345
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6496466 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 6496367  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  6496366 ctaaaatccctttttgaacata 6496345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 8779376 - 8779517
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  8779376 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 8779475  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  8779476 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 8779517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 9001913 - 9001772
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9001913 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 9001814  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9001813 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 9001772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 12292313 - 12292172
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12292313 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12292214  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12292213 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 12292172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 15222199 - 15222058
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  15222199 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 15222100  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  15222099 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 15222058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 16425281 - 16425140
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  16425281 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 16425182  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  16425181 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 16425140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 17902213 - 17902072
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||| ||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  17902213 tgcatattcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 17902114  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  17902113 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 17902072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 23762007 - 23762148
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||||| |||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  23762007 tgcatgttcaaatttttcttaataaaattaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 23762106  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  23762107 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 23762148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 24389642 - 24389501
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24389642 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24389543  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24389542 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 24664583 - 24664724
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24664583 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24664682  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24664683 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 29467329 - 29467188
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||||| |||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  29467329 tgcatgttcaaatttttcttaataaaattaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 29467230  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  29467229 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 29467188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 41688362 - 41688503
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  41688362 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 41688461  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  41688462 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 41688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 451
Target Start/End: Original strand, 13143848 - 13143988
Alignment:
Q  311 gcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatc 410  Q
    |||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| ||  |||||  || || ||||||||||| |||||    
T  13143848 gcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccgttgattctctgtatcaatgaattgtatatc 13143947  T
Q  411 cagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     | ||| |||||||||||||| ||||| || ||||||||||    
T  13143948 taaaactcctttttgaacataatctctgataaaatgatgtt 13143988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 5197814 - 5197941
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| |||||  ||||||||||| || ||||||| ||||| ||||||||||| || |    
T  5197814 tgcatgttcaaatttttctttataaaatcaaatgtttccacagttaaaggtttattgaatatatcagcccattgatgttcagtatcaatgaattgtattt 5197913  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  5197914 ctaaaattcctttttgaacataatctct 5197941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 37871176 - 37871315
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    ||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||      
T  37871176 catgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatattt 37871275  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||  |||||||||||||| ||||| || ||||| ||||    
T  37871276 aaaattcctttttgaacatagtctctgataaaatggtgtt 37871315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 37879694 - 37879833
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    ||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||      
T  37879694 catgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatattt 37879793  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||  |||||||||||||| ||||| || ||||| ||||    
T  37879794 aaaattcctttttgaacatagtctctgataaaatggtgtt 37879833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 5515386 - 5515527
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||| ||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5515386 tgcatgttcaaattttttttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5515485  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5515486 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 5515527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 17964414 - 17964555
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||| |||||||||||||||||||| | |   | ||||  |||||| | ||||||||| || ||||||||||||| |||||||| |  ||||    
T  17964414 tgcatgttcaaaattttcttaataaaatcaaatctttcaacagttagaggttttgtaaatatatcagcccattgatgatcagtatcaatgaactttatat 17964513  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| ||| |||||||||| ||||| || ||||| ||||    
T  17964514 ctaaaactcctctttgaacataatctctgataaaatggtgtt 17964555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 28320362 - 28320221
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  28320362 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 28320263  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  28320262 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 28320221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 38199365 - 38199506
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  38199365 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 38199464  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  38199465 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 38199506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 39376797 - 39376938
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  39376797 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 39376896  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  39376897 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 39376938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 9386707 - 9386580
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||||| |   | | ||| |||||  | ||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  9386707 tgcatgttcaaatttttctttataaaatcaaatttttcaacagataaaggtttagtaaatatatcagctcattgatgctcagtatcaatgaattgtatat 9386608  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  9386607 caaaaattcctttttgaacatagtctct 9386580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 11212218 - 11212091
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  11212218 tgcatgttcaaatttttctttataaaatcaaatctttgaacagataaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 11212119  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  11212118 ctaaaattcctttttgaacatagtctct 11212091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4409004 - 4409145
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  4409004 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttgtaaatatatcagctcattgatgctcagtatcaatgaattgtatat 4409103  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4409104 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 4409145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 11278509 - 11278368
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  11278509 tgcatgttcaaatttttcttaataaagtcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 11278410  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  11278409 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 11278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 13126404 - 13126525
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  13126404 tgcatgttcaaatttttcttaataaattcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 13126503  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  13126504 ctaaaatccctttttgaacata 13126525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 14470334 - 14470455
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  14470334 tgcatgttcaaatttttcttaataaattcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 14470433  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  14470434 ctaaaatccctttttgaacata 14470455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 17010847 - 17010988
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | | ||| || ||| | ||||||||| || ||||||| || || ||||||||||| ||||    
T  17010847 tgcatgttcaaatttttcttaataaattcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctctgtatcaatgaattgtatat 17010946  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
      | ||| |||||||||||||| ||||| || ||||| ||||    
T  17010947 ataaaactcctttttgaacataatctctgataaaatggtgtt 17010988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 17021653 - 17021794
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | | ||| || ||| | ||||||||| || ||||||| || || ||||||||||| ||||    
T  17021653 tgcatgttcaaatttttcttaataaattcaaatctttcaacagataaaggctttgtaaatatatcagcccattgatgctctgtatcaatgaattgtatat 17021752  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
      | ||| |||||||||||||| ||||| || ||||| ||||    
T  17021753 ataaaactcctttttgaacataatctctgataaaatggtgtt 17021794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 15837955 - 15838096
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||| ||| | |   | ||||| || ||| | ||||||||| || ||||||| || || |||| |||||| ||||    
T  15837955 tgcatgttcaaatttttcttaataaaatccaatctttccacagttaaaggctttgtaaatatatcagcccattgatgctctgtatcaacgaattgtatat 15838054  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | |   |||||||||||||| ||||| || ||||| ||||    
T  15838055 ctaaatttcctttttgaacataatctctgataaaatggtgtt 15838096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 17250889 - 17250853
Alignment:
Q  306 aaattgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||| ||||    
T  17250889 aaattgcatgttcaaatttttcttaataaaattaaat 17250853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 29897718 - 29897686
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||||    
T  29897718 tgcatgttcaaatttttcttaataaaatcaaat 29897686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 1789995 - 1789868
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| || ||| | ||||||| | || | ||||| ||||| ||||||||||| ||||    
T  1789995 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataaaggctttttaaatatattagcccactgatgctcagtatcaatgaattgtatat 1789896  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  1789895 ctaaaattcctttttgaacatagtctct 1789868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 431
Target Start/End: Complemental strand, 14317123 - 14317059
Alignment:
Q  367 aatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacata 431  Q
    ||||||||| || ||||||| ||||| ||||||||||| ||||| | ||  ||||||||||||||    
T  14317123 aatatatcagcccattgatgctcagtatcaatgaattgtatatctaaaattcctttttgaacata 14317059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 30992484 - 30992452
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  30992484 tgcatgttcaaatttttctttataaaatcaaat 30992452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 446
Target Start/End: Original strand, 73530 - 73761
Alignment:
Q  212 agagtctcagtgaagagattctgatagacattttagcttctgaatctcattagattctgaattccttattcagaggcaatcaacattctgagataaattg 311  Q
    ||||||| | |||||||| |||||||||| |||  |||||||||| || ||||||||| ||||||| ||| |||  ||| ||  | || |||| |   ||    
T  73530 agagtctgaatgaagagaatctgatagaccttt--gcttctgaatttctttagattcttaattcct-atttagaatcaagcattaatcagagacatgatg 73626  T
Q  312 catgttcaaatttttcttaataaaatcaaat-ttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatc 410  Q
    |||||||||||||||| |||||||||||||| || || |  ||||| |||||| ||||||||||| || ||||||| ||| | ||||||||||| |||||    
T  73627 catgttcaaatttttcctaataaaatcaaatcttttaata-gttaaaggttttgtgaatatatcagcccattgatgttcaatatcaatgaattgtatatc 73725  T
Q  411 cagaacacctttttgaacatattctcttattaaatg 446  Q
    || | || |||||| |||||| |||||||| |||||    
T  73726 caaagcatctttttcaacataatctcttataaaatg 73761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 7683805 - 7683944
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    ||||||||||||||||||||||||||||||| | |   | | ||| |||||| ||||||||||| || ||||||| ||||| ||||||||||| |||||     
T  7683805 catgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtgaatatatcagcccattgatgttcagtatcaatgaattgtatatct 7683904  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||  |||||||||||||| ||||| || ||||| ||||    
T  7683905 aaaattcctttttgaacatagtctctgataaaatggtgtt 7683944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4171957 - 4172098
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4171957 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4172056  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4172057 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4172098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 5645874 - 5645733
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5645874 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5645775  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5645774 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 5645733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 12619322 - 12619181
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12619322 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12619223  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12619222 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 12619181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 12735183 - 12735324
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  12735183 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 12735282  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  12735283 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 12735324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 444
Target Start/End: Original strand, 19183572 - 19183706
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| || |    
T  19183572 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatgt 19183671  T
Q  410 ccagaacacctttttgaacatattctcttattaaa 444  Q
    | | ||  |||||||||||||| ||||| ||||||    
T  19183672 ctaaaatccctttttgaacatagtctctgattaaa 19183706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 5837859 - 5838000
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  5837859 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 5837958  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  5837959 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 5838000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 7511929 - 7512070
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  7511929 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 7512028  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  7512029 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 7512070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 7695641 - 7695500
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  7695641 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 7695542  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  7695541 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 7695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 21868318 - 21868459
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  21868318 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 21868417  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  21868418 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 21868459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 36242600 - 36242459
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  36242600 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 36242501  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  36242500 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 36242459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 38099740 - 38099881
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  38099740 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 38099839  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  38099840 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 38099881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 47614102 - 47613961
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  47614102 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 47614003  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  47614002 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 47613961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 51652043 - 51651902
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  51652043 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 51651944  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  51651943 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 51651902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 19165820 - 19165680
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || |||||||||| || ||||||||||| ||||    
T  19165820 tgcatgttcaaatttttctttataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgatctgtatcaatgaattgtatat 19165721  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| || ||||||||||| ||||| || ||||| ||||    
T  19165720 ctaaaactcc-ttttgaacataatctctgataaaatggtgtt 19165680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 21130473 - 21130352
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||| | |||||||||||||| |   | ||||| |||||  ||||||||||| || ||| ||| ||||| ||||||||||| ||||    
T  21130473 tgcatgttcaaatttttccttataaaatcaaatttttccacagttaaaggtttagtgaatatatcagcccattaatgttcagtatcaatgaattgtatat 21130374  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  21130373 ctaaaattcctttttgaacata 21130352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 35396666 - 35396525
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  35396666 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 35396567  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35396566 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35396525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 35644208 - 35644067
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  35644208 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 35644109  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35644108 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 21211847 - 21211720
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |  |||| |||||  ||||||||||| |||||||||| ||| | ||||||||||| ||||    
T  21211847 tgcatgttcaaatttttctttataaaatcaaatctttccacatttaaaggtttagtgaatatatcagcctattgatgttcaatatcaatgaattgtatat 21211748  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||| ||||||| |||||    
T  21211747 ctaaaattccttttcgaacatagtctct 21211720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 149845 - 149704
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||| |||||||||||||||||||||||| | |   | | |||  ||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  149845 tgcatgtttaaatttttcttaataaaatcaaatctttcaacagataaaagttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 149746  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||| | ||||| || ||||| ||||    
T  149745 ctaaaattcctttttgaacacagtctctgataaaatggtgtt 149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 3176256 - 3176397
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  3176256 tgcatgttcaaatttttcttaataaagtcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 3176355  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  3176356 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 3176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 20879168 - 20879041
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |  |||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  20879168 tgcatgttcaaatttttcttgataaaatcaaatctttcaacaattaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 20879069  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||| | |||||||| ||| |||||    
T  20879068 ctaaaactcatttttgaaaataatctct 20879041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 20933927 - 20934000
Alignment:
Q  367 aatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacatattctcttat 440  Q
    ||||||||| || ||||||  ||||| ||||||||||| ||||| | ||  |||||||||||||| ||||||||    
T  20933927 aatatatcagcccattgattttcagtatcaatgaattgtatatctaaaattcctttttgaacatagtctcttat 20934000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 5531 - 5393
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    |||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||| | ||||||||||| ||||| |    
T  5531 atgttcaaatttttcttaataaaatcaaatctctcaacagttaaaggctttgtaaatatatcagcccattgatgctcaatatcaatgaattgtatatcta 5432  T
Q  413 gaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     ||| |||||||||||||||||||| || ||||| ||||    
T  5431 aaactcctttttgaacatattctctgataaaatggtgtt 5393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 4945 - 4804
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  4945 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 4846  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4845 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 42907 - 42766
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  42907 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 42808  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  42807 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 42766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 3180 - 3212
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  3180 tgcatgttcaaatttttctttataaaatcaaat 3212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 132374 - 132515
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||| ||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  132374 tgcatattcaaatttttcttaataaaatcaaatctttccacagataaaggttttgtaaatatatcaacccattgatgctcagtatcaatgaattgtatat 132473  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  132474 ctaaaactcctttttgaacataatctctgataaaatggtgtt 132515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 335 - 214
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| ||||||||||||||||||||| | |   | | ||| || ||| | ||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  335 tgcatgttcaagtttttcttaataaaatcaaatctttcaacagataaaggctttgtaaatatatcagctcattgatgctcagtatcaatgaattgtatat 236  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  235 ctaaaattcctttttgaacata 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 171585 - 171726
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  171585 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 171684  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  171685 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 171726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 463194 - 463053
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  463194 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 463095  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  463094 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 463053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 2711821 - 2711680
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  2711821 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 2711722  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  2711721 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 2711680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 6873438 - 6873297
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6873438 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 6873339  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  6873338 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 6873297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 9437959 - 9438100
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9437959 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9438058  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9438059 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 9438100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 20983952 - 20984093
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  20983952 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 20984051  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  20984052 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 20984093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 22093836 - 22093977
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22093836 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22093935  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  22093936 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 22093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 451
Target Start/End: Original strand, 9164262 - 9164400
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    |||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||| |    
T  9164262 atgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatatcta 9164361  T
Q  413 gaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     ||  |||||||||||||| ||||| || ||||| ||||    
T  9164362 aaattcctttttgaacatagtctctgataaaatggtgtt 9164400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 1992251 - 1992392
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  1992251 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 1992350  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  1992351 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 1992392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 4216703 - 4216844
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| | ||| ||||||||||| ||||    
T  4216703 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgtttagtatcaatgaattgtatat 4216802  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  4216803 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 4216844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 8622058 - 8622199
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||| | ||||||||||| ||||    
T  8622058 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcaatatcaatgaattgtatat 8622157  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  8622158 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 8622199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 9089929 - 9090070
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  9089929 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 9090028  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  9090029 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 9090070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 17956322 - 17956181
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| | ||||||||| ||||    
T  17956322 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtattaatgaattgtatat 17956223  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  17956222 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 17956181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 24738796 - 24738937
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  24738796 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 24738895  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  24738896 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 24738937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 26396302 - 26396161
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  26396302 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 26396203  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  26396202 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 26396161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 26691950 - 26691809
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  26691950 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 26691851  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  26691850 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 26691809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 40048312 - 40048171
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  40048312 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 40048213  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  40048212 ctaaaatccctttttgaacatagtctctgataaaatggtgtt 40048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 451
Target Start/End: Original strand, 18433220 - 18433359
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    |||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| |||||||| || |||||     
T  18433220 catgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaactgtatatct 18433319  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||| |||||||||||||| ||||| || ||||| ||||    
T  18433320 aaaactcctttttgaacataatctctgataaaatggtgtt 18433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 8008274 - 8008133
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  8008274 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 8008175  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  8008174 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 8008133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 11009882 - 11010023
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  11009882 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 11009981  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  11009982 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 11010023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 15884030 - 15883889
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||  ||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  15884030 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaagttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 15883931  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
      | ||  |||||||||||||| ||||| || ||||| ||||    
T  15883930 ttaaaattcctttttgaacataatctctgataaaatggtgtt 15883889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 25207258 - 25207117
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||  ||||    
T  25207258 tgcatgttcaaatttttctttataaaatcaaatctttcaacagataatggttttgtaaatatatcagcccattgatgttcagtatcaatgaattttatat 25207159  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  25207158 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 25207117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 446
Target Start/End: Complemental strand, 13180317 - 13180183
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    ||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||| |  | ||||||| || || ||||||||||| |||||     
T  13180317 catgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatattagtccattgatgctctgtatcaatgaattgtatatct 13180218  T
Q  412 agaacacctttttgaacatattctcttattaaatg 446  Q
    | ||| |||||||||||||| ||||| || |||||    
T  13180217 aaaactcctttttgaacataatctctgataaaatg 13180183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 5170395 - 5170245
Alignment:
Q  279 attcagaggcaatcaacattctgagataaattgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcc 378  Q
    ||||||||||||  | |||| ||| ||||| ||||||||||  || || ||| ||||||||||| | | ||| ||||| |||||| | |||||||||  |    
T  5170395 attcagaggcaagtatcattttgacataaaatgcatgttca--ttctttttattaaaatcaaatctttcttctgttaaaggttttgttaatatatcagtc 5170298  T
Q  379 tattgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacata 431  Q
     ||| ||||||||| |||||||| || ||||| | ||||||||| ||||||||    
T  5170297 cattaatgatcagtatcaatgaaatgtatatctaaaacacctttctgaacata 5170245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 20540451 - 20540520
Alignment:
Q  380 attgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacatattctcttattaaatgatg 449  Q
    ||||||||||| | ||||||||||| ||||||| |||||||||||||||||| ||| | || ||||||||    
T  20540451 attgatgatcaatatcaatgaattgcatatccataacacctttttgaacataatctttgatgaaatgatg 20540520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 42870543 - 42870684
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||||||||| |||||| | |   | |  || |||||| | ||||| ||| || ||||||| ||||| ||||||||||| ||||    
T  42870543 tgcatgttcaaatttttcttaataaagtcaaatctttcaacagacaaaggttttgtaaatatgtcagcccattgatgttcagtatcaatgaattgtatat 42870642  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  42870643 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 42870684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 14138342 - 14138469
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||  | ||||||||| || ||||||| ||||| | ||||||||| ||||    
T  14138342 tgcatgttcaaatttttctttataaaatcaaatctttccacagttaaaggcttagtaaatatatcagcccattgatgttcagtattaatgaattgtatat 14138441  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  14138442 ctaaaattcctttttgaacataatctct 14138469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 13661161 - 13661193
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||||    
T  13661161 tgcatgttcaaatttttcttaataaaatcaaat 13661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 4823822 - 4823892
Alignment:
Q  367 aatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacatattctct 437  Q
    |||||||||||  ||||||| ||||| ||||||||||| ||||| | ||  |||||||||||||| |||||    
T  4823822 aatatatcatctcattgatgttcagtatcaatgaattgtatatctaaaattcctttttgaacataatctct 4823892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 130801 - 130671
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| |||||  || |||||||| || ||||||| ||||| ||||||||||| ||||    
T  130801 tgcatgttcaaatttttctttataaaatcaaatatttccacagttaatggtttagtggatatatcagcccattgatgttcagtatcaatgaattgtatat 130702  T
Q  410 ccagaacacctttttgaacatattctcttat 440  Q
    | | ||  |||||||||||||| ||||||||    
T  130701 ctaaaattcctttttgaacatagtctcttat 130671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 6055 - 5914
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |     ||||| |||||| | ||||||||| || ||||||| || || |||||||| || ||||    
T  6055 tgcatgttcaaatttttcttaataaaatcaaatctttcaatagttaaaggttttgtaaatatatcagcccattgatgctctgtatcaatgaactgtatat 5956  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  5955 ctaaaactcctttttgaacataatctctgataaaatggtgtt 5914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 25139 - 25280
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||| ||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| |  ||||||| || || ||||||||||| ||||    
T  25139 tgcatgtacaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcaaattgatgctctgtatcaatgaattgtatat 25238  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||||||||    
T  25239 ctaaaactcctttttgaacataatctctgataaaatgatgtt 25280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 35829 - 35970
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  35829 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 35928  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  35929 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 35970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 38495 - 38354
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||| |||||||||||||||||| | |   | | ||| |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  38495 tgcatgttcaaattcttcttaataaaatcaaatctttcaacagataaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 38396  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  38395 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 38354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 43119 - 42978
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | |  || |||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  43119 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagacaaaggttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 43020  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  43019 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 42978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 49102 - 48961
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | |||  ||||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  49102 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagataaaagttttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 49003  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  49002 ctaaaattcctttttgaacataatctctgataaaatggtgtt 48961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 180178 - 180319
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  180178 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 180277  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||  |||||||||||||| ||||| || ||||| ||||    
T  180278 ctaaaattcctttttgaacatagtctctgataaaatggtgtt 180319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 410
Target Start/End: Complemental strand, 49399 - 49299
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||| | || ||||||| ||||| ||||||||||| ||||    
T  49399 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatattagcccattgatgctcagtatcaatgaattgtatat 49300  T
Q  410 c 410  Q
    |    
T  49299 c 49299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 451
Target Start/End: Complemental strand, 161128 - 160988
Alignment:
Q  311 gcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatc 410  Q
    |||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| ||  |||||  || || ||||||||||| |||||    
T  161128 gcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccgttgattctctgtatcaatgaattgtatatc 161029  T
Q  411 cagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
     | ||| |||||||||||||| ||||| || ||||||||||    
T  161028 taaaactcctttttgaacataatctctgataaaatgatgtt 160988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 312 - 451
Target Start/End: Complemental strand, 156 - 17
Alignment:
Q  312 catgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcc 411  Q
    |||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||  ||||| ||||||||||| |||||     
T  156 catgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggatttttaaatatatcagcccattgattctcagtatcaatgaattgtatatct 57  T
Q  412 agaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | ||| |||||||||||||| ||||| || ||||| ||||    
T  56 aaaactcctttttgaacataatctctgataaaatggtgtt 17  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 431
Target Start/End: Original strand, 6656 - 6774
Alignment:
Q  313 atgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatatcca 412  Q
    |||||||||||||||||||||||||||||| |||     ||||| ||  || | ||||||||| || ||||||| ||||| ||||||||||| ||||| |    
T  6656 atgttcaaatttttcttaataaaatcaaatctatcaaaagttaaaggcattgtaaatatatcagcccattgatgctcagtatcaatgaattgtatatcta 6755  T
Q  413 gaacacctttttgaacata 431  Q
     ||| ||||||||||||||    
T  6756 aaactcctttttgaacata 6774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 440
Target Start/End: Complemental strand, 3210 - 3080
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||  | |||||||||  | ||||||| ||||| ||||||||||| ||||    
T  3210 tgcatgttcaaatttttcttaataaaatcaaatctttccacagttaaaggcttagtaaatatatcagtccattgatgttcagtatcaatgaattgtatat 3111  T
Q  410 ccagaacacctttttgaacatattctcttat 440  Q
    | | ||  |||||||||||||| ||||||||    
T  3110 ctaaaattcctttttgaacatagtctcttat 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 21351 - 21492
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||| |||||||||||||||||||||| | |   | ||||| | |||  ||||||||||| || |||| || || || ||||||||||| ||||    
T  21351 tgcatgttcatatttttcttaataaaatcaaatctttccacagttaaagttttagtgaatatatcagcccattgttgttctgtatcaatgaattgtatat 21450  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  21451 ctaaaactcctttttgaacataatctctgataaaatggtgtt 21492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 74284 - 74425
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||| ||||| |||||||| |||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  74284 tgcatcttcaagtttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 74383  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  74384 ctaaaactcctttttgaacataatctctgataaaatggtgtt 74425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 6729 - 6856
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| ||||||||||||   |   | ||||| || ||| | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  6729 tgcatgttcaaatttttcttgataaaatcaaatcattcaacagttaaaggctttgtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 6828  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  6829 ctaaaaatcctttttgaacataatctct 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 431
Target Start/End: Original strand, 3608 - 3735
Alignment:
Q  304 ataaattgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaatt 403  Q
    ||||| ||||||||||||| |||||| |||||||||||| | |   | ||||| |||||  |||||||||||  | ||||||| ||||| ||||||||||    
T  3608 ataaagtgcatgttcaaatatttctttataaaatcaaatctttccacagttaaaggtttagtgaatatatcagtccattgatgttcagtatcaatgaatt 3707  T
Q  404 gaatatccagaacacctttttgaacata 431  Q
    | ||||| | ||  ||||||||||||||    
T  3708 gtatatctaaaattcctttttgaacata 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 431
Target Start/End: Original strand, 11813 - 11940
Alignment:
Q  304 ataaattgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaatt 403  Q
    ||||| ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||||||| || || | ||||||||    
T  11813 ataaagtgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattgatgctctgtataaatgaatt 11912  T
Q  404 gaatatccagaacacctttttgaacata 431  Q
    | ||||| |  || ||||||||||||||    
T  11913 gtatatctaacactcctttttgaacata 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 11074 - 10947
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||| |||||||| |||||||||||| | |   | ||||| |||||  ||||||||||| |  ||||||| ||||| ||||||||||| ||||    
T  11074 tgcatgttcaattttttctttataaaatcaaatctttccacagttaaaggtttagtgaatatatcagctcattgatgttcagtatcaatgaattgtatat 10975  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||  |||||||||||||| |||||    
T  10974 ctaaaattcctttttgaacataatctct 10947  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 161754 - 161627
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | | ||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  161754 tgcatgttcaaatttttcttaataaaatcaaatcttttaacagataaaggcttagtaaatatatcagcccattgatgctcagtatcaatgaattgtatat 161655  T
Q  410 ccagaacacctttttgaacatattctct 437  Q
    | | ||| ||||||| |||||| |||||    
T  161654 ctaaaactccttttttaacataatctct 161627  T

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Target: scaffold1365 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1365
Description:

Target: scaffold1365; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 797 - 676
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |  |||| || ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  797 tgcatgttcaaatttttctttataaaatcaaatctttccacaattaaaggcttagttaatatatcagcccattgatgttcagtatcaatgaattgtatat 698  T
Q  410 ccagaacacctttttgaacata 431  Q
    ||| ||  ||||||||||||||    
T  697 ccaaaattcctttttgaacata 676  T

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Target: scaffold0497 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 5796 - 5655
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| || ||| | ||||||| | |  ||||||| ||||| ||||||||||| ||||    
T  5796 tgcatgttcaaatttttcttgataaaatcaaatctttcaacagttaaaggctttgtaaatatattagcacattgatgctcagtatcaatgaattgtatat 5697  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| | |||||||||||| ||||| || ||||| ||||    
T  5696 ctaaaactcttttttgaacatagtctctgataaaatggtgtt 5655  T

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Target: scaffold0269 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 11691 - 11832
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||| ||||||||| | |   | ||||| || ||| | ||||||||| |  ||||||| ||||| ||||||||||  ||||    
T  11691 tgcatgttcaaatttttcttaatcaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcaaattgatgctcagtatcaatgaattatatat 11790  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| ||||||| |||||| ||||| || ||||| ||||    
T  11791 ctaaaactcctttttaaacataatctctgataaaatggtgtt 11832  T

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Target: scaffold0185 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Original strand, 13800 - 13941
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||| | ||||||||| || ||| ||  || || ||||||||||| ||||    
T  13800 tgcatgttcaaatttttcttaataaaatcaaatctttcaacagttaaaggctttgtaaatatatcagcccattcattttctgtatcaatgaattgtatat 13899  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||| ||| ||||| || ||||| ||||    
T  13900 ctaaaactcctttttgaagataatctctgataaaatggtgtt 13941  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 20699 - 20558
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |     ||||| || ||| | ||||||||| || |||  || || || ||||||||||| ||||    
T  20699 tgcatgttcaaatttttcttaataaaatcaaatctttcaatagttaaaggctttgtaaatatatcagcccattattgctctgtatcaatgaattgtatat 20600  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  20599 ctaaaactcctttttgaacataatctctgataaaatggtgtt 20558  T

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Target: scaffold0132; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 33900 - 33759
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |     ||||| || ||| | ||||||||| || |||  || || || ||||||||||| ||||    
T  33900 tgcatgttcaaatttttcttaataaaatcaaatctttcaatagttaaaggctttgtaaatatatcagcccattattgctctgtatcaatgaattgtatat 33801  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| |||||||||||||| ||||| || ||||| ||||    
T  33800 ctaaaactcctttttgaacataatctctgataaaatggtgtt 33759  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 437
Target Start/End: Complemental strand, 27858 - 27725
Alignment:
Q  304 ataaattgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaatt 403  Q
    ||||| |||||||||||| ||||||| |||||||||||| | |   | ||||| || ||  | ||||||||| || ||||||| ||||| ||||||||||    
T  27858 ataaagtgcatgttcaaacttttctttataaaatcaaatctttccgcagttaaaggcttagtaaatatatcaacccattgatgttcagtatcaatgaatt 27759  T
Q  404 gaatatccagaacacctttttgaacatattctct 437  Q
    | ||||| | ||  |||||||||||||| |||||    
T  27758 gtatatctaaaattcctttttgaacatagtctct 27725  T

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Target: scaffold0863 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 429
Target Start/End: Complemental strand, 3602 - 3483
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    ||||||||||||||||||||||||||||||||| | |   | ||||| || ||  | ||||||||| || ||||||| | ||| ||||||||||| ||||    
T  3602 tgcatgttcaaatttttcttaataaaatcaaatctttccacagttaaaggcttagtaaatatatcaacccattgatgttgagtatcaatgaattgtatat 3503  T
Q  410 ccagaacacctttttgaaca 429  Q
    | | ||  ||||||||||||    
T  3502 ctaaaattcctttttgaaca 3483  T

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Target: scaffold0201 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 30947 - 30826
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||| ||||||  | |   |  |||| |||||  ||||||||||| || ||||||| ||||| ||||||||||| ||||    
T  30947 tgcatgttcaaatttttctttataacatcaaacctttccacaattaaaggtttagtgaatatatcagcccattgatgttcagtatcaatgaattgtatat 30848  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  30847 ctaaaattcctttttgaacata 30826  T

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Target: scaffold0906 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 54 - 22
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||||    
T  54 tgcatgttcaaatttttcttaataaaatcaaat 22  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 109608 - 109640
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||||||||||||||||    
T  109608 tgcatgttcaaatttttcttaataaaatcaaat 109640  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 3176 - 3246
Alignment:
Q  367 aatatatcatcctattgatgatcagtgtcaatgaattgaatatccagaacacctttttgaacatattctct 437  Q
    ||||||||| || ||||||| ||||| ||||||||||| ||||| | ||  |||||||||||||| |||||    
T  3176 aatatatcagcccattgatgttcagtatcaatgaattgtatatctaaaattcctttttgaacataatctct 3246  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 22348 - 22227
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |   |  ||||  | ||  | ||||||||| || ||||||| ||||| ||||||||||| ||||    
T  22348 tgcatgttcaaatttttctttataaaatcaaatctttccacatttaaatgcttagtaaatatatcagcccattgatgttcagtatcaatgaattgtatat 22249  T
Q  410 ccagaacacctttttgaacata 431  Q
    | | ||  ||||||||||||||    
T  22248 ctaaaattcctttttgaacata 22227  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 30355 - 30290
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatca 375  Q
    |||||||||||||||||||| |||||||||||| | |   | ||||| ||||| ||||||||||||    
T  30355 tgcatgttcaaatttttctttataaaatcaaatatttccactgttaaaggtttaatgaatatatca 30290  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 54874 - 54733
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaatttatattccgttaagggttttatgaatatatcatcctattgatgatcagtgtcaatgaattgaatat 409  Q
    |||||||||||||||||||| |||||||||||| | |     ||||| || ||| | |||||||||  | ||||||| | ||| ||||||||||| ||||    
T  54874 tgcatgttcaaatttttcttgataaaatcaaatctttcaattgttaaaggctttgtaaatatatcaggccattgatgcttagtatcaatgaattgtatat 54775  T
Q  410 ccagaacacctttttgaacatattctcttattaaatgatgtt 451  Q
    | | ||| | ||||| |||||| ||||| || ||||| ||||    
T  54774 ctaaaactcttttttcaacataatctctgataaaatggtgtt 54733  T

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Target: scaffold0411 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 2560 - 2528
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  2560 tgcatgttcaaatttttctttataaaatcaaat 2528  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 13248 - 13216
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    |||||||||||||||||||| ||||||||||||    
T  13248 tgcatgttcaaatttttctttataaaatcaaat 13216  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 2874 - 2906
Alignment:
Q  310 tgcatgttcaaatttttcttaataaaatcaaat 342  Q
    ||||||||||| |||||||||||||||||||||    
T  2874 tgcatgttcaagtttttcttaataaaatcaaat 2906  T

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