View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20058_low_2 (Length: 749)

Name: NF20058_low_2
Description: NF20058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20058_low_2
NF20058_low_2
[»] chr3 (30 HSPs)
chr3 (21-713)||(5534073-5534766)
chr3 (21-94)||(25340915-25340988)
chr3 (21-76)||(44579633-44579687)
chr3 (21-94)||(32909292-32909365)
chr3 (23-76)||(32629079-32629131)
chr3 (21-76)||(14827522-14827576)
chr3 (21-72)||(21506772-21506822)
chr3 (41-75)||(665981-666015)
chr3 (21-94)||(32843253-32843326)
chr3 (41-94)||(53365920-53365974)
chr3 (21-82)||(48531275-48531335)
chr3 (54-95)||(52425518-52425559)
chr3 (21-76)||(7738666-7738720)
chr3 (21-72)||(10498709-10498759)
chr3 (21-72)||(27185474-27185524)
chr3 (21-76)||(28244114-28244168)
chr3 (21-76)||(30229536-30229590)
chr3 (24-94)||(38130950-38131020)
chr3 (24-94)||(53996299-53996369)
chr3 (21-94)||(916437-916509)
chr3 (21-71)||(20370296-20370345)
chr3 (21-79)||(21914842-21914899)
chr3 (21-82)||(22722399-22722460)
chr3 (25-94)||(29631187-29631256)
chr3 (41-90)||(47536475-47536525)
chr3 (41-94)||(54018397-54018451)
chr3 (27-83)||(977943-977999)
chr3 (22-67)||(32836171-32836215)
chr3 (47-76)||(38034819-38034848)
chr3 (22-94)||(50037309-50037381)
[»] chr5 (34 HSPs)
chr5 (21-94)||(32858667-32858739)
chr5 (21-94)||(22522792-22522865)
chr5 (21-94)||(28207129-28207202)
chr5 (24-92)||(10704324-10704392)
chr5 (44-95)||(2089290-2089342)
chr5 (21-76)||(37932327-37932381)
chr5 (21-94)||(3445238-3445311)
chr5 (21-75)||(39980505-39980558)
chr5 (21-94)||(17046331-17046403)
chr5 (24-76)||(18331707-18331758)
chr5 (24-83)||(20927639-20927698)
chr5 (21-92)||(34191430-34191501)
chr5 (22-82)||(41650943-41651002)
chr5 (21-76)||(6624773-6624827)
chr5 (21-76)||(11637582-11637636)
chr5 (21-76)||(13864341-13864395)
chr5 (41-76)||(20721066-20721101)
chr5 (21-76)||(22555228-22555282)
chr5 (21-95)||(39529444-39529518)
chr5 (41-76)||(40837913-40837948)
chr5 (21-94)||(6489004-6489077)
chr5 (24-94)||(11720894-11720963)
chr5 (21-94)||(16036824-16036897)
chr5 (21-94)||(22665194-22665267)
chr5 (21-79)||(24485696-24485753)
chr5 (21-78)||(31561351-31561408)
chr5 (21-82)||(35270684-35270745)
chr5 (44-94)||(35412976-35413026)
chr5 (21-94)||(37462109-37462181)
chr5 (21-94)||(40715940-40716013)
chr5 (23-68)||(6375522-6375566)
chr5 (25-74)||(18391601-18391649)
chr5 (22-94)||(20688038-20688110)
chr5 (23-76)||(26409252-26409304)
[»] chr6 (26 HSPs)
chr6 (22-94)||(26320555-26320626)
chr6 (21-96)||(33938669-33938743)
chr6 (21-94)||(32053785-32053858)
chr6 (22-82)||(20847515-20847574)
chr6 (20-75)||(11982547-11982601)
chr6 (24-94)||(14296948-14297018)
chr6 (21-92)||(21296755-21296825)
chr6 (22-95)||(5040823-5040896)
chr6 (41-95)||(12602041-12602095)
chr6 (41-91)||(21373401-21373451)
chr6 (22-94)||(16130763-16130835)
chr6 (21-82)||(18256880-18256940)
chr6 (23-76)||(26400863-26400915)
chr6 (21-73)||(12333581-12333632)
chr6 (21-72)||(4494885-4494935)
chr6 (21-91)||(5758277-5758347)
chr6 (21-72)||(20744135-20744185)
chr6 (21-76)||(24269880-24269934)
chr6 (21-94)||(247657-247729)
chr6 (41-94)||(8569725-8569779)
chr6 (41-94)||(8916465-8916519)
chr6 (25-94)||(21847195-21847264)
chr6 (21-94)||(29740479-29740552)
chr6 (21-82)||(8810637-8810697)
chr6 (41-94)||(11456367-11456420)
chr6 (22-94)||(17935727-17935799)
[»] chr4 (39 HSPs)
chr4 (24-94)||(51458678-51458747)
chr4 (21-76)||(9946424-9946478)
chr4 (21-94)||(19588151-19588224)
chr4 (21-94)||(54857606-54857679)
chr4 (21-74)||(24885812-24885864)
chr4 (21-76)||(241394-241448)
chr4 (21-76)||(35021477-35021531)
chr4 (21-76)||(35287517-35287571)
chr4 (24-76)||(20383488-20383539)
chr4 (21-92)||(37081227-37081298)
chr4 (21-92)||(47814244-47814315)
chr4 (21-72)||(2186347-2186397)
chr4 (21-76)||(7230277-7230331)
chr4 (21-76)||(10303521-10303575)
chr4 (25-76)||(11949773-11949823)
chr4 (21-76)||(20799404-20799458)
chr4 (21-72)||(23247612-23247662)
chr4 (21-76)||(24665001-24665055)
chr4 (41-72)||(49021782-49021813)
chr4 (21-72)||(52270044-52270094)
chr4 (21-71)||(2430994-2431043)
chr4 (22-76)||(5924647-5924700)
chr4 (21-75)||(7030904-7030957)
chr4 (21-94)||(10261760-10261832)
chr4 (22-76)||(10497257-10497310)
chr4 (22-72)||(16431614-16431663)
chr4 (21-94)||(21562623-21562695)
chr4 (41-75)||(21991258-21991292)
chr4 (21-94)||(23809946-23810019)
chr4 (21-94)||(26926701-26926773)
chr4 (21-71)||(38340335-38340384)
chr4 (21-71)||(39171385-39171434)
chr4 (240-278)||(39395324-39395362)
chr4 (21-94)||(43034333-43034406)
chr4 (21-94)||(43330144-43330216)
chr4 (21-71)||(43374287-43374336)
chr4 (21-82)||(50362142-50362203)
chr4 (24-73)||(31780745-31780793)
chr4 (41-94)||(49949350-49949403)
[»] chr7 (28 HSPs)
chr7 (21-94)||(19416511-19416584)
chr7 (21-75)||(580937-580990)
chr7 (21-82)||(18505661-18505721)
chr7 (21-82)||(46207757-46207817)
chr7 (21-76)||(10244724-10244778)
chr7 (21-94)||(27462427-27462500)
chr7 (21-82)||(3953438-3953498)
chr7 (21-76)||(20243252-20243307)
chr7 (41-76)||(8084443-8084478)
chr7 (44-94)||(9893071-9893122)
chr7 (21-76)||(39801703-39801757)
chr7 (21-76)||(40752849-40752903)
chr7 (24-86)||(44406855-44406917)
chr7 (24-94)||(47607901-47607971)
chr7 (21-83)||(11373669-11373729)
chr7 (21-94)||(20763152-20763224)
chr7 (21-91)||(21993179-21993248)
chr7 (21-94)||(29488718-29488790)
chr7 (21-94)||(33232388-33232460)
chr7 (21-94)||(34284530-34284602)
chr7 (21-71)||(47342674-47342723)
chr7 (21-74)||(5352326-5352378)
chr7 (42-82)||(6781824-6781865)
chr7 (21-94)||(8883550-8883621)
chr7 (22-71)||(13044157-13044205)
chr7 (22-79)||(36428146-36428202)
chr7 (21-74)||(41527557-41527609)
chr7 (41-82)||(48065218-48065259)
[»] chr2 (27 HSPs)
chr2 (21-94)||(22523003-22523076)
chr2 (26-94)||(36474764-36474832)
chr2 (21-76)||(32513671-32513725)
chr2 (21-94)||(20455888-20455961)
chr2 (21-94)||(33063983-33064056)
chr2 (21-94)||(44526125-44526198)
chr2 (24-75)||(4056790-4056840)
chr2 (21-76)||(20565085-20565139)
chr2 (21-76)||(31543009-31543063)
chr2 (21-95)||(34977201-34977275)
chr2 (21-76)||(41187467-41187521)
chr2 (41-95)||(41859868-41859923)
chr2 (21-94)||(3708691-3708763)
chr2 (21-71)||(9383224-9383273)
chr2 (21-71)||(9842217-9842266)
chr2 (21-94)||(10735822-10735895)
chr2 (21-94)||(11868653-11868725)
chr2 (41-94)||(14735884-14735938)
chr2 (41-82)||(17789608-17789650)
chr2 (41-94)||(22061303-22061357)
chr2 (21-79)||(34464416-34464473)
chr2 (21-94)||(35360046-35360118)
chr2 (22-76)||(42066710-42066763)
chr2 (27-76)||(6765613-6765661)
chr2 (41-82)||(9581290-9581331)
chr2 (22-94)||(24579659-24579731)
chr2 (23-76)||(24593375-24593427)
[»] chr8 (30 HSPs)
chr8 (47-94)||(7987721-7987768)
chr8 (21-93)||(13286128-13286199)
chr8 (24-94)||(40795377-40795447)
chr8 (21-94)||(27718885-27718958)
chr8 (24-82)||(30427731-30427788)
chr8 (41-94)||(7968932-7968985)
chr8 (21-82)||(37570757-37570817)
chr8 (24-72)||(2554226-2554273)
chr8 (21-93)||(8837917-8837988)
chr8 (21-73)||(29499768-29499819)
chr8 (41-76)||(12800910-12800945)
chr8 (21-76)||(19163546-19163600)
chr8 (24-94)||(32051523-32051593)
chr8 (21-72)||(39433407-39433457)
chr8 (41-94)||(12748917-12748971)
chr8 (21-94)||(20665354-20665426)
chr8 (21-82)||(25136847-25136908)
chr8 (21-94)||(27587218-27587291)
chr8 (22-95)||(29716690-29716763)
chr8 (21-94)||(30550717-30550789)
chr8 (41-94)||(37141373-37141427)
chr8 (22-95)||(37872975-37873048)
chr8 (21-94)||(44215466-44215538)
chr8 (21-74)||(6314335-6314387)
chr8 (22-75)||(8461847-8461899)
chr8 (25-74)||(9656009-9656057)
chr8 (21-74)||(11708983-11709035)
chr8 (23-76)||(19778064-19778116)
chr8 (21-74)||(23852908-23852960)
chr8 (21-74)||(43962036-43962088)
[»] chr1 (30 HSPs)
chr1 (21-83)||(6219865-6219926)
chr1 (22-94)||(8736433-8736505)
chr1 (23-76)||(42888574-42888626)
chr1 (21-94)||(42045363-42045436)
chr1 (23-76)||(19620575-19620627)
chr1 (21-73)||(16826351-16826402)
chr1 (24-72)||(25086483-25086530)
chr1 (22-82)||(26498059-26498118)
chr1 (23-94)||(39302944-39303015)
chr1 (21-92)||(41763148-41763219)
chr1 (21-91)||(563198-563268)
chr1 (21-76)||(2613719-2613773)
chr1 (21-76)||(3509951-3510005)
chr1 (21-76)||(8269378-8269432)
chr1 (21-76)||(25532970-25533024)
chr1 (21-76)||(29739334-29739388)
chr1 (24-87)||(41926822-41926884)
chr1 (24-71)||(48100722-48100768)
chr1 (22-76)||(1605394-1605447)
chr1 (41-94)||(1789554-1789608)
chr1 (21-79)||(13096893-13096950)
chr1 (23-73)||(45140019-45140068)
chr1 (49-83)||(47835831-47835865)
chr1 (22-94)||(48646716-48646789)
chr1 (21-75)||(52441522-52441575)
chr1 (22-94)||(10356174-10356246)
chr1 (23-68)||(14520943-14520987)
chr1 (22-94)||(16967185-16967257)
chr1 (23-76)||(38448876-38448928)
chr1 (26-71)||(44718073-44718117)
[»] scaffold0735 (1 HSPs)
scaffold0735 (23-76)||(1527-1579)
[»] scaffold0154 (1 HSPs)
scaffold0154 (21-96)||(37532-37607)
[»] scaffold0011 (2 HSPs)
scaffold0011 (21-96)||(185260-185335)
scaffold0011 (21-69)||(223155-223202)
[»] scaffold0031 (1 HSPs)
scaffold0031 (22-72)||(47255-47304)
[»] scaffold0180 (1 HSPs)
scaffold0180 (21-82)||(17729-17789)
[»] scaffold0118 (2 HSPs)
scaffold0118 (21-76)||(45409-45463)
scaffold0118 (21-71)||(39995-40044)
[»] scaffold0259 (1 HSPs)
scaffold0259 (30-72)||(5419-5460)
[»] scaffold1149 (1 HSPs)
scaffold1149 (22-71)||(2330-2378)
[»] scaffold0896 (1 HSPs)
scaffold0896 (21-82)||(3138-3198)
[»] scaffold0040 (1 HSPs)
scaffold0040 (21-82)||(56781-56841)


Alignment Details
Target: chr3 (Bit Score: 589; Significance: 0; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 21 - 713
Target Start/End: Complemental strand, 5534766 - 5534073
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccaccatcnnnnnnntatcacatacgtagtgg 120  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||| ||| ||||||||       ||||||||| |||||||    
T  5534766 ctcgtgagcttagctccgtatggtatggacaatgcgtaaaatatgcaaggttcgggttcaaatcccgaccaccatcaaaaaaatatcacatatgtagtgg 5534667  T
Q  121 ttggtcggtgggatggagcacttgataatctttcatttcactcaattttaaggtgtggagattattaaa-tgatgatggtggttctcttaatttttggag 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  5534666 ttggtcggtgggatggagcacttgataatctttcatttcactcaattttaaggtgtggagattattaaaatgatgatggtggtcctcttaatttttggag 5534567  T
Q  220 gcatcgtattgttctttatatctgaactgtgctgttgcatttaaccgagcaaagatagaatatcgatgtgctcgctctttgtggtgaatggaccattgag 319  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5534566 gcatcgtattgttctttatatctgaactgtgttgttgcatttaaccgagcaaagatagaatctcgatgtgctcgctctttgtggtgaatggaccattgag 5534467  T
Q  320 aacaaatccatctactttgtcgatcaaatgatgttgtcatattgtcaccggaaactgttacaacttctacaaaacctgcaagattgtgatacatttaatc 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  5534466 aacaaatccatctactttgtcgatcaaatgatgttgtcatattgtcaccggaaacggttacaacttctaccgaacctgcaagattgtgatgcatttaatc 5534367  T
Q  420 gaattcaatttgtttgaaatcattacctcggattggcacctgctcattttattctggctgtgaaatcaggtgattgtatctgcttagtcttgaaaccaat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5534366 gaattcaatttgtttgaaatcattacctcggattggtacctgctcattttattctggctgtgaaatcaggtgattgtatctacttagtcttgaaaccaat 5534267  T
Q  520 gaactcgaccatcagaattttatactgttttgggagtcttattgtctatataaattgaagtaaaataatatttacacataataatctattgactatgaat 619  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5534266 gaactcgaccatcagaattttatactgttttgggagtcttattgtccatataaattgaagtaaaataatatttacacataataatctattgactatgaat 5534167  T
Q  620 aaaaagtttcatcaaataaatttatatgttcgtggtgtctgaaacattttctttctctgcattaactgatattgcttccattcttcataaataa 713  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  5534166 aaaaagtttcatcaaataaatttatatgttcgtggtgtctgaaacattttctttctctgcattaactgatattgcttccatttttgataaataa 5534073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 25340988 - 25340915
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  25340988 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 25340915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 44579633 - 44579687
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  44579633 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggg 44579687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 32909365 - 32909292
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||| ||| || | ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  32909365 ctcgtgagcttaactcagt-tagtatggacaatgcataaaatatgcaaggtcctgggttcaaatcccggccacca 32909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 32629079 - 32629131
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  32629079 cgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggg 32629131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 14827522 - 14827576
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||    
T  14827522 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaagatccggg 14827576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 21506822 - 21506772
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  21506822 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtc 21506772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 665981 - 666015
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||||||||||||||||||||||||||    
T  665981 tggtatggacaatacataaaatatgcaaggtccgg 666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 32843326 - 32843253
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc-cgggttcaaattccggccacca 94  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||||  |||||||||  ||||||||||    
T  32843326 ctcgtgagcttagctcagt-tggtttggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacca 32843253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 53365920 - 53365974
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||| |||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  53365920 tggtttggacaatacatgaaatatgcaaggtccggggttcaaatcccggccacca 53365974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 48531275 - 48531335
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || ||||  ||| ||||||||||||||||||||| ||||||||||    
T  48531275 ctcgtgagcttagctcagt-tggttgggataatacataaaatatgcaaggttcgggttcaaa 48531335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 52425518 - 52425559
Alignment:
Q  54 acataaaatatgcaaggtccgggttcaaattccggccaccat 95  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  52425518 acataaaatatgcaaggcccgggttcaaactccggccaccat 52425559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 7738666 - 7738720
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || ||||| ||||||| ||||||||||||||||||||||    
T  7738666 ctcgtgagcttaactcagt-tggtagggacaatgcataaaatatgcaaggtccggg 7738720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 10498759 - 10498709
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||    
T  10498759 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtc 10498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 27185474 - 27185524
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||| ||||||||||||| ||||||||||||    
T  27185474 ctcgtgagcttagctcagt-tggtagggacaatacataatatatgcaaggtc 27185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 28244168 - 28244114
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || ||||||| ||||| ||||||||||||||||||||||    
T  28244168 ctcgtgagcttaactcagt-tggtatgaacaatgcataaaatatgcaaggtccggg 28244114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 30229590 - 30229536
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||||  | |||||| |||||| ||||||||||||||||||||||    
T  30229590 ctcgtgagcttagctcaat-tggtattgacaatgcataaaatatgcaaggtccggg 30229536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 38131020 - 38130950
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||| ||| || ||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  38131020 gtgagcttaactcagt-tggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 38130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 53996299 - 53996369
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc-cgggttcaaattccggccacca 94  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||  |||||| ||| ||||||||||    
T  53996299 gtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtctggggttcgaatcccggccacca 53996369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 916437 - 916509
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  916437 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 916509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 20370345 - 20370296
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || || |||||||||| |||||||||||||||||    
T  20370345 ctcgtgagcttagctcagt-tgatatggacaatgcataaaatatgcaaggt 20370296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 21914899 - 21914842
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttc 79  Q
    |||||||||||||||| || |||||  ||||||||||||  ||||||||||||||||||    
T  21914899 ctcgtgagcttagctcagt-tggtaatgacaatacataatgtatgcaaggtccgggttc 21914842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 22722399 - 22722460
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaa 82  Q
    |||||||||||||||| || | ||||| ||||| |||||||||||||||||||| ||||||||    
T  22722399 ctcgtgagcttagctcagt-tagtatgaacaatgcataaaatatgcaaggtccgaggttcaaa 22722460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 29631187 - 29631256
Alignment:
Q  25 tgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg-ttcaaattccggccacca 94  Q
    |||||||||||| || ||||||||||||| ||||| ||||||||||| |||| ||||||  ||||||||||    
T  29631187 tgagcttagctcagt-tggtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccacca 29631256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 47536525 - 47536475
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggcc 90  Q
    ||||| ||||||| |||||||||||||||||||| |||||||| |||||||    
T  47536525 tggtagggacaatgcataaaatatgcaaggtccgaggttcaaactccggcc 47536475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 54018451 - 54018397
Alignment:
Q  41 tggtatggacaatacataaaatatgcaagg-tccgggttcaaattccggccacca 94  Q
    ||||||||||||| |||||||||||||||| || |||||||||| | ||||||||    
T  54018451 tggtatggacaatgcataaaatatgcaaggttcagggttcaaatcctggccacca 54018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 977999 - 977943
Alignment:
Q  27 agcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaat 83  Q
    |||||||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||    
T  977999 agcttagctcagt-tggtatggacaatgcataatatatgcaaggtccggagttcaaat 977943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 32836171 - 32836215
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgca 67  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||    
T  32836171 tcgtgagcttagctcagt-tggtatggacaatgcataaaatatgca 32836215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 38034848 - 38034819
Alignment:
Q  47 ggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||||||||||||||||||    
T  38034848 ggacaatacataaaatatgcaaggtccggg 38034819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 50037309 - 50037381
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaagg-tccgggttcaaattccggccacca 94  Q
    ||||||||||||||| || ||||||||||||| |||||  ||||||||| || ||||||||| ||| |||||||    
T  50037309 tcgtgagcttagctcagt-tggtatggacaatgcataatgtatgcaaggttcggggttcaaactccagccacca 50037381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 32858667 - 32858739
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  32858667 ctcgtgagcttagctccgt-tggtatggacaatgcataaaatatgcaaggtcagggttcaaattccggccacca 32858739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 22522865 - 22522792
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  22522865 ctcgtgagcttagctcggt-tggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 22522792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 28207129 - 28207202
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||    
T  28207129 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccgaggttcgaatcccggccacca 28207202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 10704392 - 10704324
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccac 92  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||    
T  10704392 gtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggggttcaaactacggccac 10704324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 2089342 - 2089290
Alignment:
Q  44 tatggacaatacataaaatatgcaaggtccgggt-tcaaattccggccaccat 95  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  2089342 tatggacaatacataaaatatgcaaagtccgggtatcaaattccgaccaccat 2089290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 37932327 - 37932381
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  37932327 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtccggg 37932381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 3445311 - 3445238
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||| ||||||| |||||  |||||||||||| |||||||||| ||||||||||    
T  3445311 ctcgtgagcttagctcagt-tggtaaggacaatgcataatgtatgcaaggtccggggttcaaatcccggccacca 3445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 39980505 - 39980558
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||||||| || ||||||||| ||| |||||||||||||||||||||    
T  39980505 ctcgtgagcttagctcagt-tggtatggataatgcataaaatatgcaaggtccgg 39980558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 17046331 - 17046403
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    |||||||||||| ||| || ||||||||||||| ||||| ||||||||| |||| |||| ||| ||||||||||    
T  17046331 ctcgtgagcttaactcagt-tggtatggacaatgcataatatatgcaagatccgagttcgaatcccggccacca 17046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 18331707 - 18331758
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||  | ||||||||||||| ||||||||||||||||||||||    
T  18331707 gtgagcttagctcact-tggtatggacaatgcataaaatatgcaaggtccggg 18331758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 20927639 - 20927698
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaat 83  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| |||| |||||||||    
T  20927639 gtgagcttagctcagt-tggtatggacaatacataatatatgcaagatccgaggttcaaat 20927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 34191430 - 34191501
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccac 92  Q
    |||||||||||||||| || ||||  ||||||| ||||||||||||||||||| |||||||||  ||||||||    
T  34191430 ctcgtgagcttagctcagt-tggttgggacaatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 41651002 - 41650943
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||||||| ||| || ||||||||||||| ||||| |||||||||||||| |||||||    
T  41651002 tcgtgagcttaactcagt-tggtatggacaatgcataatatatgcaaggtccgagttcaaa 41650943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 6624773 - 6624827
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||| ||||||||| ||||| ||||||||||||||||    
T  6624773 ctcgtgagcttagctcagt-tggcatggacaatgcataatatatgcaaggtccggg 6624827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 11637636 - 11637582
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || ||||||||||||| ||||||||||||||||| ||||    
T  11637636 ctcgtgagcttaactcagt-tggtatggacaatgcataaaatatgcaaggttcggg 11637582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 13864341 - 13864395
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || ||||||| ||||||||||| ||||||||||||||||    
T  13864341 ctcgtgagcttaactcagt-tggtatgaacaatacataatatatgcaaggtccggg 13864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 20721066 - 20721101
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20721066 tggtatggacaatacataatatatgcaaggtccggg 20721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 22555228 - 22555282
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || ||||||||||||| |||| |||||||||||||||||    
T  22555228 ctcgtgagcttaactcagt-tggtatggacaatgcatataatatgcaaggtccggg 22555282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 39529444 - 39529518
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaa-tatgcaaggtccgggttcaaattccggccaccat 95  Q
    |||||||||||||||| || | | | ||||||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  39529444 ctcgtgagcttagctcagt-tagcagggacaatgcataaaaatatgcaaggtcggggttcaaactccggccaccat 39529518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 40837948 - 40837913
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| |||||||||||||||||||||    
T  40837948 tggtatggacaatatataaaatatgcaaggtccggg 40837913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 6489004 - 6489077
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc-cgggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||  |||||||||  ||||||||||    
T  6489004 ctcgtgagcttagctcagt-tggtagggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 6489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 11720894 - 11720963
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||||||| ||| || ||||| ||||||| ||||| |||||||||||| |||||||||  ||||||||||    
T  11720894 gtgagcttaactcagt-tggtagggacaatgcataatatatgcaaggtcggggttcaaaccccggccacca 11720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 16036824 - 16036897
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||| ||||||||||| || ||| ||||||||||||||| |||||||||||||  |||||||| || ||||||||    
T  16036824 ctcgagagcttagctcagt-tggcatggacaatacataatatatgcaaggtccatggttcaaactctggccacca 16036897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 22665267 - 22665194
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||| || | |||||||||||  |||||||||||||| ||||| |||||||  ||||||||||    
T  22665267 ctcgtgagcttagctcagt-tagtatggacaatgtataaaatatgcaagatccggagttcaaaccccggccacca 22665194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 24485696 - 24485753
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttc 79  Q
    |||||||||||||||  || ||||||||||||| ||||| ||||||||||| |||||||    
T  24485696 ctcgtgagcttagcttagt-tggtatggacaatgcataatatatgcaaggttcgggttc 24485753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 31561408 - 31561351
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataa-aatatgcaaggtccgggtt 78  Q
    |||||||||||| ||| || ||||||||||||| ||||| |||||||||||||||||||    
T  31561408 ctcgtgagcttaactcagt-tggtatggacaatgcataataatatgcaaggtccgggtt 31561351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 35270745 - 35270684
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaa 82  Q
    |||||||||||||||| || ||||  ||||||| ||||||||||||||||||| |||||||||    
T  35270745 ctcgtgagcttagctcagt-tggttgggacaatgcataaaatatgcaaggtccagggttcaaa 35270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 35412976 - 35413026
Alignment:
Q  44 tatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    |||||||||| ||||| ||||||||||||||||||| ||  ||||||||||    
T  35412976 tatggacaatgcataatatatgcaaggtccgggttcgaaccccggccacca 35413026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 37462109 - 37462181
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  37462109 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 37462181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 40716013 - 40715940
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||  | || |||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  40716013 ctcgtgagcttagctcaat-tgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 40715940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 6375522 - 6375566
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaa 68  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||    
T  6375522 cgtgagcttagctcagt-tggtaaggacaatacataaaatatgcaa 6375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 18391601 - 18391649
Alignment:
Q  25 tgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||| || ||||| ||||||| ||||||||||||||||||||    
T  18391601 tgagcttagctcagt-tggtaaggacaatgcataaaatatgcaaggtccg 18391649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 20688038 - 20688110
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||| |||||||| || |||| |||||||| ||||| ||||||||||||||| ||||||| || ||||||||    
T  20688038 tcgtgaacttagctcagt-tggtttggacaatgcataatatatgcaaggtccggagttcaaactctggccacca 20688110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 26409252 - 26409304
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||||||||||| ||||| ||||| ||||||||||    
T  26409252 cgtgagcttagctcagt-tggtatggacaatgcataatatatgtaaggtccggg 26409304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 26320626 - 26320555
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  26320626 tcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccgggttcaaactccggtcacca 26320555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 33938743 - 33938669
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccaccatc 96  Q
    |||||||||||||||| || ||||||| ||||| ||||| ||||||||||| |||||| |||||||||||||||||    
T  33938743 ctcgtgagcttagctcagt-tggtatgaacaatgcataatatatgcaaggttcgggtttaaattccggccaccatc 33938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 32053785 - 32053858
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||| || |||||||| |||||||||||    
T  32053785 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacca 32053858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 20847574 - 20847515
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||||||||||| || | || |||||||| ||||||||||||||||||||||||||||    
T  20847574 tcgtgagcttagctcagt-tagtttggacaatgcataaaatatgcaaggtccgggttcaaa 20847515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 11982547 - 11982601
Alignment:
Q  20 actcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||    
T  11982547 actcgtgagcttagctcaa-atggtatggacaatacataatatatgcaaggtccgg 11982601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 14297018 - 14296948
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||  || ||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||    
T  14297018 gtgagcttagctgagt-tggtatggacaatacataaaatatgtaaggtccggggttcaaaccccggccacca 14296948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 21296755 - 21296825
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccac 92  Q
    |||||||| ||||||| || ||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  21296755 ctcgtgagtttagctcagt-tggttgggacaatgcataaaatatgcaaggtccaggttcaaatcccggccac 21296825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 5040896 - 5040823
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccaccat 95  Q
    ||||||||||||||| || |||||  ||||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  5040896 tcgtgagcttagctcagt-tggtaaagacaaaacataatatatgcaaggtccggtgttcaaactccggccaccat 5040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 12602041 - 12602095
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccaccat 95  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| |||| |||||||    
T  12602041 tggtagggacaatacataatatatgcaaggtctgggttcaaaatccgaccaccat 12602095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 21373451 - 21373401
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaattccggcca 91  Q
    ||||||||||||| ||||||||||||||||||| |||||||| || |||||    
T  21373451 tggtatggacaatgcataaaatatgcaaggtccaggttcaaactctggcca 21373401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 16130763 - 16130835
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    ||||||||||||||  || ||||||||||||| |||||||||||||||||||| | ||||||| || |||||||    
T  16130763 tcgtgagcttagcttagt-tggtatggacaatgcataaaatatgcaaggtccgagtttcaaatcccagccacca 16130835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 18256880 - 18256940
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || || || ||||||| ||||| ||||||||||||||||||||||    
T  18256880 ctcgtgagcttagctcagt-tgataaggacaatgcataatatatgcaaggtccgggttcaaa 18256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 26400863 - 26400915
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||  | ||||||||||||||||||| ||||||||||||||||    
T  26400863 cgtgagcttagctcaat-tggtatggacaatacataatatatgcaaggtccggg 26400915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 12333632 - 12333581
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc 73  Q
    |||||||||||||||| || | ||||||||||| |||||||||||||||||||    
T  12333632 ctcgtgagcttagctcagt-tagtatggacaatgcataaaatatgcaaggtcc 12333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 4494935 - 4494885
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| |||||||||||| |||||    
T  4494935 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcgaggtc 4494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 5758347 - 5758277
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggcca 91  Q
    |||||||||||||||| || ||||||| ||||| | ||||||||||||||||| ||||||||| | ||||||    
T  5758347 ctcgtgagcttagctcagt-tggtatgtacaattcttaaaatatgcaaggtcctgggttcaaacttcggcca 5758277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 20744135 - 20744185
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||    
T  20744135 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtc 20744185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 24269880 - 24269934
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || | ||||||||||| ||||||||||||||||| ||||    
T  24269880 ctcgtgagcttagctcagt-tagtatggacaatgcataaaatatgcaaggttcggg 24269934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 247657 - 247729
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  247657 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 8569725 - 8569779
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  8569725 tggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 8569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 8916519 - 8916465
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||  |||||||||    
T  8916519 tggtagggacaatacataatatatgcaaggtccggagttcaaatctcggccacca 8916465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21847195 - 21847264
Alignment:
Q  25 tgagcttagctcggtatggtatggacaatacataaaatatgcaaggt-ccgggttcaaattccggccacca 94  Q
    |||||||||||| || ||||| ||||||||||||| ||||||||||| | |||||| ||| ||||||||||    
T  21847195 tgagcttagctcagt-tggtagggacaatacataatatatgcaaggtacggggttcgaatcccggccacca 21847264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 29740479 - 29740552
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||  | ||||||||||||| ||||| ||| ||||||||| |||||||||  ||||||||||    
T  29740479 ctcgtgagcttagctcaat-tggtatggacaatgcataatatacgcaaggtccggggttcaaaccccggccacca 29740552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 8810637 - 8810697
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || |||||  |||||||||||| |||||||||||| | |||||||    
T  8810637 ctcgtgagcttagctcagt-tggtaaagacaatacataatatatgcaaggtctgagttcaaa 8810697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 11456420 - 11456367
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||||||||||| ||||| ||||| |||||| |||||||||  ||||||||||    
T  11456420 tggtatggacaatgcataatatatgtaaggtcggggttcaaaccccggccacca 11456367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 17935727 - 17935799
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc-cgggttcaaattccggccacca 94  Q
    |||||| |||||||| || |||| |||||||| ||||||||||||||||||  |||||||||| ||| ||||||    
T  17935727 tcgtgaacttagctcagt-tggtttggacaatgcataaaatatgcaaggtctagggttcaaatcccgaccacca 17935799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 51458678 - 51458747
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  51458678 gtgagcttagctcagt-tggtatggacaatacataaaatatgcaaggtccgggttcgaatcctggccacca 51458747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 9946424 - 9946478
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  9946424 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggg 9946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 19588151 - 19588224
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||  | ||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  19588151 ctcgtgagcttagctcaat-tggtatggacaatgcataaaatatgcaaggtccagggttcaaaccccggccacca 19588224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 54857679 - 54857606
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  54857679 ctcgtgagcttagctcggt-tggtataaacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 54857606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 24885864 - 24885812
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  24885864 ctcgtgagcttaactcagt-tggtatggacaatacataaaatatgcaaggtccg 24885812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 241448 - 241394
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  241448 ctcgtaagcttagctcggt-tggtatgaacaatgcataaaatatgcaaggtccggg 241394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 35021531 - 35021477
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||| ||||    
T  35021531 ctcgtgagcttagctcagt-tgatatggacaatacataaaatatgcaaggttcggg 35021477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 35287571 - 35287517
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||    
T  35287571 ctcgtgagcttagctcagt-tggtatgaacaatgcataaaatatgcaaggtccggg 35287517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 20383488 - 20383539
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  20383488 gtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtccggg 20383539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 37081298 - 37081227
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccac 92  Q
    ||||||||||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||||| |||| ||||    
T  37081298 ctcgtgagcttagctcggt-tggtttggaaaatacataatatatccaaggtccgaggttcaaactccgaccac 37081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 47814315 - 47814244
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccac 92  Q
    ||||| |||||||||| || |||||||||||| |||||| ||||||||||||| |||||||||  ||||||||    
T  47814315 ctcgtaagcttagctcagt-tggtatggacaacacataatatatgcaaggtccggggttcaaaccccggccac 47814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 2186397 - 2186347
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||    
T  2186397 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtc 2186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 7230277 - 7230331
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  7230277 ctcgtgagcttagctcagt-tggtaaggacaatgcataatatatgcaaggtccggg 7230331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 10303575 - 10303521
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||| ||||||    
T  10303575 ctcgtgagcttagctcagt-tggtaaggacaatgcataaaatatgcaagatccggg 10303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 11949823 - 11949773
Alignment:
Q  25 tgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  11949823 tgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtccggg 11949773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 20799458 - 20799404
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  20799458 ctcgtgagcttagctcagt-tggtagggacaatgcataatatatgcaaggtccggg 20799404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 23247662 - 23247612
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    ||||||||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  23247662 ctcgtgagcttagctcggt-tggtatggacaacgcataatatatgcaaggtc 23247612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 24665055 - 24665001
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||| ||| ||||| ||||||||||||||||    
T  24665055 ctcgtgagcttagctcagt-tggtatggagaatgcataatatatgcaaggtccggg 24665001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 72
Target Start/End: Original strand, 49021782 - 49021813
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtc 72  Q
    ||||||||||||||||||||||||||||||||    
T  49021782 tggtatggacaatacataaaatatgcaaggtc 49021813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 52270094 - 52270044
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||    
T  52270094 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtc 52270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 2430994 - 2431043
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||||||    
T  2430994 ctcgtgagtttagctcagt-tggtattgacaatacataaaatatgcaaggt 2431043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 5924647 - 5924700
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||| || || |||||||||||||||| ||||| ||||||||||    
T  5924647 tcgtgagcttagctcagt-tgctatggacaatacataatatatggaaggtccggg 5924700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 7030957 - 7030904
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||| ||| || |||||| |||||| |||||||||||||||||||||    
T  7030957 ctcgtgagcttaactcagt-tggtatagacaatgcataaaatatgcaaggtccgg 7030904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 10261832 - 10261760
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  10261832 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 10261760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 10497257 - 10497310
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||  | ||||||||||||| |||||||||||||| |||||||    
T  10497257 tcgtgagcttagctcaat-tggtatggacaatgcataaaatatgcaaagtccggg 10497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 16431614 - 16431663
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||    
T  16431614 tcgtgaacttagctcagt-tggtatggacaatgcataaaatatgcaaggtc 16431663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 21562623 - 21562695
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  21562623 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 21562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 21991292 - 21991258
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgg 75  Q
    ||||||||||||| |||||||||||||||||||||    
T  21991292 tggtatggacaatgcataaaatatgcaaggtccgg 21991258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 23809946 - 23810019
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaagg-tccgggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||  ||||| |||||||||| || |||||||||  ||||||||||    
T  23809946 ctcgtgagcttagctcagt-tggtatggacaaagcataatatatgcaaggttcagggttcaaaccccggccacca 23810019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 26926773 - 26926701
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  26926773 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 26926701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 38340384 - 38340335
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  38340384 ctcgtgagcttaactcagt-tggtatggacaatacataaaatatgtaaggt 38340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 39171434 - 39171385
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || || |||||||||| |||||||||||||||||    
T  39171434 ctcgtgagcttagctcagt-tgatatggacaatgcataaaatatgcaaggt 39171385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 39395362 - 39395324
Alignment:
Q  240 tctgaactgtgctgttgcatttaaccgagcaaagataga 278  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  39395362 tctgaactgtgttgttgcatttaactgagcaaagataga 39395324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 43034406 - 43034333
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    |||||||||||| ||| || ||||||||||||| ||||| |||||||||||| | ||||||||  ||||||||||    
T  43034406 ctcgtgagcttaactcagt-tggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccacca 43034333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 43330144 - 43330216
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  43330144 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 43330216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 43374336 - 43374287
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || || |||||||||| |||||||||||||||||    
T  43374336 ctcgtgagcttagctcagt-tgatatggacaatgcataaaatatgcaaggt 43374287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 50362203 - 50362142
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaa 82  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||| |||||||||    
T  50362203 ctcgtgagcttagctcagt-tggtagggacaatgcataatatatgcaaggtccagggttcaaa 50362142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 31780745 - 31780793
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc 73  Q
    ||||||||||||| || ||||| ||||||| |||||||||||||||||||    
T  31780745 gtgagcttagctcagt-tggtaaggacaatgcataaaatatgcaaggtcc 31780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 49949350 - 49949403
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||| ||||||| ||||| |||||||||||| |||||| ||| ||||||||||    
T  49949350 tggtaaggacaatgcataatatatgcaaggtctgggttcgaatcccggccacca 49949403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 19416511 - 19416584
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  19416511 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 19416584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 580990 - 580937
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  580990 ctcgtgagcttagctcggt-tggtatggacaatgcataaaatatgcaagatccgg 580937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 18505721 - 18505661
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||| ||||||||||||    
T  18505721 ctcgtgagcttagctcagt-tggtagggacaatgcataaaatatgcaagatccgggttcaaa 18505661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 46207757 - 46207817
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || ||||||| ||||| |||||||||||||| |||||||||||||    
T  46207757 ctcgtgagcttagctcagt-tggtatgaacaatgcataaaatatgcaatgtccgggttcaaa 46207817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 10244724 - 10244778
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  10244724 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtccggg 10244778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 27462500 - 27462427
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||| |||||| || ||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  27462500 ctcgtgagcatagctcagt-tggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 27462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 3953438 - 3953498
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| ||  |||||||||||| ||||| ||||||||||| ||||||||||    
T  3953438 ctcgtgagcttagctcagtc-ggtatggacaatgcataatatatgcaaggttcgggttcaaa 3953498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 20243252 - 20243307
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataa-aatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||    
T  20243252 ctcgtgagcttagctcagt-tggtatggacaatgcataataatatgcaaggtccggg 20243307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 8084443 - 8084478
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8084443 tggtatggacaatgcataaaatatgcaaggtccggg 8084478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 9893122 - 9893071
Alignment:
Q  44 tatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    |||||||||||||||||||||||||||| ||  |||||||| ||||||||||    
T  9893122 tatggacaatacataaaatatgcaaggttcgaagttcaaatcccggccacca 9893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 39801703 - 39801757
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||| ||||||||| ||||||    
T  39801703 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaagatccggg 39801757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 40752903 - 40752849
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || | ||||||||||||||||| |||||||| |||||||    
T  40752903 ctcgtgagcttagctcagt-tagtatggacaatacataatatatgcaatgtccggg 40752849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 44406917 - 44406855
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattcc 86  Q
    ||||||||||||| || ||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  44406917 gtgagcttagctcagt-tggttgggacaatgcataaaatatgcaaggtccgaggttcaaattcc 44406855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 47607971 - 47607901
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||| ||||||| || ||||| ||||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  47607971 gtgagtttagctcagt-tggtagggacattacataatatatgcaaggtccagggttcaaactccggccacca 47607901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 11373669 - 11373729
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaat 83  Q
    |||||||||||||||| || |||| |||||||| |||||| |||||||| |||||||||||||    
T  11373669 ctcgtgagcttagctcagt-tggtgtggacaatgcataaa-tatgcaagatccgggttcaaat 11373729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 20763152 - 20763224
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  20763152 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 20763224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 21993179 - 21993248
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggcca 91  Q
    |||||||||||| ||| || ||||||||||||| |||||||||||||||| | || ||||||  |||||||    
T  21993179 ctcgtgagcttaactcagt-tggtatggacaatgcataaaatatgcaaggccgggtttcaaaccccggcca 21993248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 29488718 - 29488790
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  29488718 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 29488790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 33232460 - 33232388
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  33232460 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 33232388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 34284602 - 34284530
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  34284602 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 34284530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 47342674 - 47342723
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||||||||    
T  47342674 ctcgtgaacttagctcagt-tggtatggacaatgcataaaatatgcaaggt 47342723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 5352326 - 5352378
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||||||| || ||||| ||||||||||||| |||| |||||||||    
T  5352326 ctcgtgagcttagctcagt-tggtaaggacaatacataatatatacaaggtccg 5352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 6781824 - 6781865
Alignment:
Q  42 ggtatggacaatacataaaatatgcaaggtcc-gggttcaaa 82  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  6781824 ggtatggacaatgcataaaatatgcaaggtccagggttcaaa 6781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 8883550 - 8883621
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    |||||||||||| ||| || ||||||||||||| ||||| || |||||||| ||||||| ||| ||||||||||    
T  8883550 ctcgtgagcttaactcagt-tggtatggacaatgcataatatgtgcaaggt-cgggttcgaatcccggccacca 8883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 13044205 - 13044157
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    ||||||||||||||| || ||||| ||||||| |||||||||||||||||    
T  13044205 tcgtgagcttagctcagt-tggtaaggacaatgcataaaatatgcaaggt 13044157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 36428146 - 36428202
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttc 79  Q
    ||||||||||| ||| || |||||||||||||  ||||||||||||||||| ||||||    
T  36428146 tcgtgagcttaactcagt-tggtatggacaatgtataaaatatgcaaggtcggggttc 36428202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 41527557 - 41527609
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||||||  || ||||||||||||| ||||| ||||||||||||||    
T  41527557 ctcgtgagcttagcttagt-tggtatggacaatgcataatatatgcaaggtccg 41527609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 48065218 - 48065259
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||||||||| ||||| |||||||||||| |||||||||    
T  48065218 tggtatggacaattcataatatatgcaaggtcggggttcaaa 48065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 22523076 - 22523003
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||||||    
T  22523076 ctcgtgagcttagctcagt-tggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccacca 22523003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 36474764 - 36474832
Alignment:
Q  26 gagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||| || || || ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  36474764 gagcttagctcagt-tgatagggacaatgcataaaatatgcaaggtccggggttcaaattccggccacca 36474832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 32513671 - 32513725
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||    
T  32513671 ctcgtgagcttagctcagg-tggtatggacaatacataaaatatgcacggtccggg 32513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 20455888 - 20455961
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||||  | ||||||||||||| ||||| ||||||||||||| |||||| ||| ||||||||||    
T  20455888 ctcgtgagcttagctcaat-tggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccacca 20455961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 33063983 - 33064056
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||| || || |||||||||| ||||| ||||||||||||||| |||| || |||||||||||    
T  33063983 ctcgtgagcttagctcagt-tgatatggacaatgcataatatatgcaaggtccggagttcgaactccggccacca 33064056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 44526125 - 44526198
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg-ttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| ||||| ||| |||||||||||| ||||||  ||||||||||    
T  44526125 ctcgtgagcttagctcagt-tggtatggacaatgcataatatacgcaaggtccgggattcaaaccccggccacca 44526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 4056790 - 4056840
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||||||| ||||| ||||||| ||||| |||||||||||||||    
T  4056790 gtgagcttagctcggt-tggtaaggacaatgcataatatatgcaaggtccgg 4056840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 20565139 - 20565085
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  20565139 ctcgtgagcttagctcagt-tggtagggacaatgcataatatatgcaaggtccggg 20565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 31543009 - 31543063
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| | |||||||||| ||| ||||| ||||||||||||||||    
T  31543009 ctcgtgagcttagctcag-atggtatggataatgcataatatatgcaaggtccggg 31543063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 34977201 - 34977275
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccaccat 95  Q
    |||||||||||| ||| || ||||||||||||| ||||| ||||||||||||||| ||| |||  |||||||||||    
T  34977201 ctcgtgagcttaactcagt-tggtatggacaatgcataatatatgcaaggtccggagtttaaaccccggccaccat 34977275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 41187521 - 41187467
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||  || ||||||||||||| |||||||||||||| |||||||    
T  41187521 ctcgtgagcttagcttagt-tggtatggacaatgcataaaatatgcaaagtccggg 41187467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 41859868 - 41859923
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtc-cgggttcaaattccggccaccat 95  Q
    ||||||||||||| ||||||||||||||||||  |||||||||  |||||||||||    
T  41859868 tggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccaccat 41859923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 3708691 - 3708763
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  3708691 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 3708763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 9383273 - 9383224
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  9383273 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggt 9383224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 9842266 - 9842217
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || ||||| ||||||| |||||||||||||||||    
T  9842266 ctcgtgagcttagctcagt-tggtagggacaatgcataaaatatgcaaggt 9842217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 10735895 - 10735822
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||| |||| || ||||| ||||||||||||| |||||||||  ||||||||||    
T  10735895 ctcgtgagcttagctcagt-tggtagggacgatgcataatatatgcaaggtccggggttcaaaccccggccacca 10735822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 11868725 - 11868653
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  11868725 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 11868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 14735938 - 14735884
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    ||||||||||||| ||||||||||| ||||| || |||||||| |||||||||||    
T  14735938 tggtatggacaatgcataaaatatgtaaggttcgaggttcaaactccggccacca 14735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 17789650 - 17789608
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtcc-gggttcaaa 82  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  17789650 tggtatggacaatacataaaatatacaaggtccagggttcaaa 17789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 22061303 - 22061357
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    ||||||| ||||||||||||||||||||||||||  |||||||  ||||||||||    
T  22061303 tggtatgtacaatacataaaatatgcaaggtccgatgttcaaaccccggccacca 22061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 34464473 - 34464416
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttc 79  Q
    |||||||| ||||||| || ||||||||||||| ||||| ||||||||| |||||||||    
T  34464473 ctcgtgagtttagctcagt-tggtatggacaatgcataatatatgcaagctccgggttc 34464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 35360118 - 35360046
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  35360118 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 35360046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 42066710 - 42066763
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||| || ||||||||||||| || || ||||||||||||||||    
T  42066710 tcgtgagcttagctcagt-tggtatggacaatgcacaatatatgcaaggtccggg 42066763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 6765613 - 6765661
Alignment:
Q  27 agcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||| || ||||||||||||| ||||||||||| ||||||||||    
T  6765613 agcttagctcagt-tggtatggacaatgcataaaatatgtaaggtccggg 6765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 9581331 - 9581290
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||  |||| ||||||||||||||||||||||    
T  9581331 tggtatggacaatgaataatatatgcaaggtccgggttcaaa 9581290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 24579731 - 24579659
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||||  || |||| |||||||| ||||| ||||||||||||| ||||||||| || ||||||||    
T  24579731 tcgtgagcttagcttagt-tggtttggacaatgcataatatatgcaaggtccagggttcaaactctggccacca 24579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 24593375 - 24593427
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  24593375 cgtgagcttagctcagt-tggtaaggacaatgcataatatatgcaaggtccggg 24593427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 7987768 - 7987721
Alignment:
Q  47 ggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7987768 ggacaatacataatatatgcaaggtccgggttcaaattccgaccacca 7987721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 13286128 - 13286199
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacc 93  Q
    |||||||||||||||| || |||||| |||||| ||||| ||||||||| ||||||||||||  |||||||||    
T  13286128 ctcgtgagcttagctcagt-tggtatagacaatgcataatatatgcaagatccgggttcaaaccccggccacc 13286199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 40795377 - 40795447
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||| ||| || ||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  40795377 gtgagcttaactcagt-tggtatgaacaatacataatatatgcaaggtccggggttctaattccggccacca 40795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 27718958 - 27718885
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||| || || |||||||||| ||||| ||||||||||||||| ||||||| |||| ||||||    
T  27718958 ctcgtgagcttagctcagt-tgatatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 30427731 - 30427788
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||||||||| || ||||||||||||| ||||| ||||||||||||| ||||||||    
T  30427731 gtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtccaggttcaaa 30427788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 7968985 - 7968932
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacca 94  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||| || |||||||    
T  7968985 tggtaaggacaatgcataatatatgcaaggtccgggttcaaatcccagccacca 7968932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 37570817 - 37570757
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||| |||||  |||||||||    
T  37570817 ctcgtgaacttagctcggt-tggtatggacaatacataacatatgtaaggttggggttcaaa 37570757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 2554273 - 2554226
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    ||||||||||||| || || |||||||||||||||||||||||||||||    
T  2554273 gtgagcttagctcagt-tgatatggacaatacataaaatatgcaaggtc 2554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 8837917 - 8837988
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccggccacc 93  Q
    ||||||| |||| |||||| || || ||||||| ||||| |||| |||||||||||||||||||||| |||||    
T  8837917 ctcgtgaacttaactcggt-tgatagggacaatgcataatatatacaaggtccgggttcaaattccgaccacc 8837988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 29499768 - 29499819
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc 73  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||||||||    
T  29499768 ctcgtgagcttagctcaat-tggtatggacaatgcataaaatatgcaaggtcc 29499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 12800945 - 12800910
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12800945 tggtatggacaatacataatatatgcaaggtccggg 12800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 19163600 - 19163546
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| |||||  |||||||||||||||    
T  19163600 ctcgtgagcttagctcagt-tggtatggacaatgcataatttatgcaaggtccggg 19163546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 32051593 - 32051523
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||| || |||| |||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  32051593 gtgagcttagctcagt-tggtttggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 32051523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 39433407 - 39433457
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||||||||| || || |||| ||||||||||||||||||||||||    
T  39433407 ctcgtgagcttagctcagt-tgatatgaacaatacataaaatatgcaaggtc 39433457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 12748917 - 12748971
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||||    
T  12748917 tggtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 12748971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 20665426 - 20665354
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  20665426 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 20665354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 25136908 - 25136847
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaa 82  Q
    ||||||||| |||||| || ||||||||||||  |||||||||||||||||||| ||||||||    
T  25136908 ctcgtgagcatagctcagt-tggtatggacaaggcataaaatatgcaaggtccgaggttcaaa 25136847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 27587218 - 27587291
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||| ||||||| ||| | ||||||||||||| |||||||||  ||||||||||    
T  27587218 ctcgtgagcttagctcagt-tggtaaggacaatgcatgatatatgcaaggtccggggttcaaaccccggccacca 27587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 29716763 - 29716690
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg-ttcaaattccggccaccat 95  Q
    ||||||||||| ||| || ||||| | ||||| ||||| |||||||||||||||| |||||| ||||||||||||    
T  29716763 tcgtgagcttaactcagt-tggtaggaacaattcataatatatgcaaggtccgggattcaaactccggccaccat 29716690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 30550789 - 30550717
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  30550789 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 30550717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 37141373 - 37141427
Alignment:
Q  41 tggtatggacaatacataaaatatgcaagg-tccgggttcaaattccggccacca 94  Q
    ||||||||||||| ||||| |||||||||| || ||||||||| |||||||||||    
T  37141373 tggtatggacaatgcataatatatgcaaggttcggggttcaaactccggccacca 37141427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 37872975 - 37873048
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccaccat 95  Q
    ||||||||||||||| || |||||||| |||| ||||||||||||||||| || ||||| ||  |||||||||||    
T  37872975 tcgtgagcttagctcagt-tggtatggtcaatgcataaaatatgcaaggtacgtggttcgaaccccggccaccat 37873048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 44215538 - 44215466
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  44215538 ctcgtgagcttagcttagt-tggta-ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 44215466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 6314387 - 6314335
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||||||| || || || ||||||| ||||||||||||||||||||    
T  6314387 ctcgtgagcttagctcagt-tgataaggacaatgcataaaatatgcaaggtccg 6314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 8461899 - 8461847
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    ||||||||||||||| || ||||  ||||||| |||||||||||||||||||||    
T  8461899 tcgtgagcttagctcagt-tggttgggacaatgcataaaatatgcaaggtccgg 8461847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 9656057 - 9656009
Alignment:
Q  25 tgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||| || ||||| ||||||| ||||||||||||||||||||    
T  9656057 tgagcttagctcagt-tggtaaggacaatgcataaaatatgcaaggtccg 9656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 11708983 - 11709035
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||||||| || ||||| ||||||| ||||| ||||||||||||||    
T  11708983 ctcgtgagcttagctcagt-tggtagggacaatgcataatatatgcaaggtccg 11709035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 19778064 - 19778116
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  19778064 cgtgagcttagctcagt-tggtaaggacaatgcataatatatgcaaggtccggg 19778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 23852908 - 23852960
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||||||||||||| ||  |||||||||||| ||||| ||||||||||||||    
T  23852908 ctcgtgagcttagctcagtc-ggtatggacaatgcataatatatgcaaggtccg 23852960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 43962088 - 43962036
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg 74  Q
    |||||| ||||||||| || ||||| ||||||||||||| ||||||||||||||    
T  43962088 ctcgtgggcttagctcagt-tggtaaggacaatacataatatatgcaaggtccg 43962036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 6219926 - 6219865
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaat 83  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||||    
T  6219926 ctcgtgagcttaactcggt-tggtagggacaatacataatatatgtaaggtccgggttcaaat 6219865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 8736433 - 8736505
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||| || ||| ||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  8736433 tcgtgagcttaacttggt-tggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 8736505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 42888574 - 42888626
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  42888574 cgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggg 42888626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 42045436 - 42045363
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggccacca 94  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||| || |||||||  ||||||||||    
T  42045436 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccacca 42045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 19620575 - 19620627
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||| ||||||||||||| ||||||||||||||||    
T  19620575 cgtgagcttagctcagt-tggtaaggacaatacataatatatgcaaggtccggg 19620627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 16826351 - 16826402
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc 73  Q
    |||||||||||||||| || || |||||||||| |||||||||||||||||||    
T  16826351 ctcgtgagcttagctcagt-tgctatggacaatgcataaaatatgcaaggtcc 16826402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 25086483 - 25086530
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  25086483 gtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtc 25086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 26498059 - 26498118
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    ||||||||||||||| || ||||| ||||||| ||||||||||| |||||| |||||||||    
T  26498059 tcgtgagcttagctcagt-tggtacggacaatgcataaaatatgtaaggtctgggttcaaa 26498118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 39302944 - 39303015
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    ||||||| |||||| || ||||| |||||||||||||||||||||||||| | ||||||||  ||||||||||    
T  39302944 cgtgagcatagctcagt-tggtaaggacaatacataaaatatgcaaggtcggtggttcaaaccccggccacca 39303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 41763219 - 41763148
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccac 92  Q
    |||||||||||||||| || ||||| ||| ||| ||||||||||||||||||| |||||||||  ||||||||    
T  41763219 ctcgtgagcttagctcagt-tggtagggataatgcataaaatatgcaaggtccggggttcaaaccccggccac 41763148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 563198 - 563268
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg-gttcaaattccggcca 91  Q
    |||||||||||||||| || || || |||||| |||||| ||||||||||||||| ||||||| ||||||||    
T  563198 ctcgtgagcttagctcagt-tgataaggacaaaacataatatatgcaaggtccggagttcaaactccggcca 563268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 2613719 - 2613773
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||||| || ||||||||||||| ||||||||||| ||||| ||||    
T  2613719 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgtaaggttcggg 2613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 3510005 - 3509951
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||| |||||||| || ||||||||||||| ||||| ||||||||||||||||    
T  3510005 ctcgtgaacttagctcagt-tggtatggacaatgcataatatatgcaaggtccggg 3509951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 8269432 - 8269378
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||| |||||||| || ||||| ||||||||||||| ||||||||||||||||    
T  8269432 ctcgtgaacttagctcagt-tggtaaggacaatacataatatatgcaaggtccggg 8269378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 25532970 - 25533024
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||| || || ||||||||||||| ||||| ||||||||||||||||    
T  25532970 ctcgtgagcttagttcagt-tggtatggacaatgcataatatatgcaaggtccggg 25533024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 29739334 - 29739388
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||| |||||||||| || ||||| ||||||| ||||||||||||||||||||||    
T  29739334 ctcgttagcttagctcagt-tggtaaggacaatgcataaaatatgcaaggtccggg 29739388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 41926822 - 41926884
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaattccg 87  Q
    ||||||||||||| || ||||| ||||||| ||||| ||||| ||||||||||||| |||||||    
T  41926822 gtgagcttagctcagt-tggtaaggacaatgcataatatatgtaaggtccgggttcgaattccg 41926884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 48100722 - 48100768
Alignment:
Q  24 gtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||    
T  48100722 gtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggt 48100768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 1605394 - 1605447
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    ||||||||||||||  || | ||||||||||| ||||||||||||||||||||||    
T  1605394 tcgtgagcttagcttagt-tagtatggacaatgcataaaatatgcaaggtccggg 1605447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 1789608 - 1789554
Alignment:
Q  41 tggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    |||||| ||||||||||| |||||||||||||| ||||||||| || ||||||||    
T  1789608 tggtattgacaatacatacaatatgcaaggtccagggttcaaactctggccacca 1789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13096893 - 13096950
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttc 79  Q
    ||||||||||||||||   |||||||||||||| |||||||||| ||||||| ||||||    
T  13096893 ctcgtgagcttagctcaa-atggtatggacaatgcataaaatatacaaggtcggggttc 13096950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 45140068 - 45140019
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc 73  Q
    |||||||||||||| || ||||||||||||| ||||| |||||||||||||    
T  45140068 cgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggtcc 45140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 47835831 - 47835865
Alignment:
Q  49 acaatacataaaatatgcaaggtccgggttcaaat 83  Q
    ||||| |||||||||||||||||||||||||||||    
T  47835831 acaatgcataaaatatgcaaggtccgggttcaaat 47835865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 48646789 - 48646716
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataa-aatatgcaaggtccggg-ttcaaattccggccacca 94  Q
    ||||||||||| ||| || || |||||||||| ||||| ||||||||||||||||| |||||| |||||||||||    
T  48646789 tcgtgagcttaactcagtttg-tatggacaatgcataataatatgcaaggtccggggttcaaactccggccacca 48646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 52441575 - 52441522
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgg 75  Q
    |||||||||||||||| || |||||| |||||| ||||| |||||||||||||||    
T  52441575 ctcgtgagcttagctcagt-tggtatagacaatgcataatatatgcaaggtccgg 52441522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 10356246 - 10356174
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccacca 94  Q
    ||||||||||| ||| || ||||||||||||| ||||| ||||||| ||||| |||||| || |||||||||||    
T  10356246 tcgtgagcttaactcagt-tggtatggacaatgcataatatatgcacggtccggggttcgaactccggccacca 10356174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 14520943 - 14520987
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaa 68  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||    
T  14520943 cgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaa 14520987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 16967257 - 16967185
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccg-ggttcaaattccggccacca 94  Q
    ||||||||||||||  || || |||||||||| ||||| ||||||||||| || |||||||| |||||||||||    
T  16967257 tcgtgagcttagcttagt-tgatatggacaatgcataatatatgcaaggttcgaggttcaaactccggccacca 16967185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 38448928 - 38448876
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||| ||||||| ||||| ||||||||||||||||    
T  38448928 cgtgagcttagctcagt-tggtaaggacaatgcataatatatgcaaggtccggg 38448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 44718117 - 44718073
Alignment:
Q  26 gagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||    
T  44718117 gagcttagctcagt-tggtatggacaatagataaaatatgcaaggt 44718073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 1527 - 1579
Alignment:
Q  23 cgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  1527 cgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtccggg 1579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 37532 - 37607
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccaccatc 96  Q
    |||||||||||||||  || ||||||| ||||| ||||||||||||||||||| |||||| ||| ||||||||||||    
T  37532 ctcgtgagcttagctaagt-tggtatgaacaatgcataaaatatgcaaggtccggggttcgaatcccggccaccatc 37607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 185260 - 185335
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtcc-gggttcaaattccggccaccatc 96  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||| ||| |||||||||  |||| |||||||    
T  185260 ctcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaagatccggggttcaaaccccggtcaccatc 185335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 223155 - 223202
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaag 69  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||    
T  223155 ctcgtgagcttagctcagt-tggtatggacaatacataaaatatgcaag 223202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 47304 - 47255
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||||||    
T  47304 tcgtgagcttagctcagt-tggtatggacaatgcataaaatatgcaaggtc 47255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 17729 - 17789
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||| ||||||| || ||||||||||||| ||||| | ||||||||||||||||||||    
T  17729 ctcgtgagtttagctcagt-tggtatggacaatgcataatacatgcaaggtccgggttcaaa 17789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 45409 - 45463
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccggg 76  Q
    |||||||||||| ||| || |||| |||||||||||||| ||||||||||||||||    
T  45409 ctcgtgagcttaactcagt-tggtttggacaatacataatatatgcaaggtccggg 45463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 39995 - 40044
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  39995 ctcgtgagcttagctcagt-tggtatggacaatgcataatatatgcaaggt 40044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 5419 - 5460
Alignment:
Q  30 ttagctcggtatggtatggacaatacataaaatatgcaaggtc 72  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  5419 ttagctcggt-tggtatggacaatgcataaaatatgcaaggtc 5460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 2330 - 2378
Alignment:
Q  22 tcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggt 71  Q
    |||||||||||||||||| ||||| ||||||| ||||| |||||||||||    
T  2330 tcgtgagcttagctcggt-tggtagggacaatgcataatatatgcaaggt 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 3138 - 3198
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || |||||  |||||||||||| |||||||||||| | |||||||    
T  3138 ctcgtgagcttagctcagt-tggtaaagacaatacataatatatgcaaggtctgagttcaaa 3198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 56781 - 56841
Alignment:
Q  21 ctcgtgagcttagctcggtatggtatggacaatacataaaatatgcaaggtccgggttcaaa 82  Q
    |||||||||||||||| || |||||||||||||  |||| ||||||||||||| | ||||||    
T  56781 ctcgtgagcttagctcagt-tggtatggacaatgtataatatatgcaaggtccagtttcaaa 56841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University