View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20058_low_81 (Length: 218)
Name: NF20058_low_81
Description: NF20058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20058_low_81 |
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Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22231695 - 22231891
Alignment:
| Q |
1 |
aaaatctctttataggaggaggacttgaaataaaatgttgtaaactataaaaatacatttgtattcttattttccttattcttttcattttcaagaaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22231695 |
aaaatctctttataggaggaggacttgaaataaaatgttgtaaactataaaaatacatttgtattcttattttccttattcttttcattttc----aaga |
22231790 |
T |
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| Q |
101 |
gatgatgttgcaacttgccattagctagagaagcaacttatttgtgtgagagagaaaaagcacttcaaacaagtagttcaaagaa-ggaatagtgataag |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
22231791 |
gatgatgttgcaacttgccattagctagagaagcaacttatttgtgtgagagagagaaagcacttcaaacaagtagttcaaagaagggaatagtgataag |
22231890 |
T |
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