View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20059_high_2 (Length: 242)

Name: NF20059_high_2
Description: NF20059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20059_high_2
NF20059_high_2
[»] chr7 (46 HSPs)
chr7 (1-239)||(48843123-48843362)
chr7 (54-122)||(7331110-7331178)
chr7 (54-121)||(7331862-7331929)
chr7 (52-122)||(33255717-33255787)
chr7 (77-122)||(47942032-47942077)
chr7 (77-122)||(47942688-47942733)
chr7 (77-122)||(47948118-47948163)
chr7 (182-241)||(30404958-30405017)
chr7 (182-240)||(13846704-13846762)
chr7 (182-223)||(27234946-27234987)
chr7 (77-122)||(33256406-33256451)
chr7 (155-219)||(24211566-24211630)
chr7 (54-122)||(31724173-31724241)
chr7 (164-239)||(39728636-39728711)
chr7 (160-223)||(40116151-40116214)
chr7 (158-240)||(17882702-17882784)
chr7 (178-224)||(23092364-23092410)
chr7 (77-122)||(16959595-16959640)
chr7 (54-111)||(34151596-34151653)
chr7 (54-111)||(34175471-34175528)
chr7 (182-238)||(20353053-20353109)
chr7 (194-229)||(3177325-3177360)
chr7 (165-219)||(3498365-3498419)
chr7 (160-222)||(11032369-11032431)
chr7 (80-122)||(16941088-16941130)
chr7 (182-224)||(28289563-28289605)
chr7 (182-240)||(31670994-31671052)
chr7 (161-219)||(37066249-37066307)
chr7 (178-228)||(40116224-40116274)
chr7 (182-224)||(42061779-42061821)
chr7 (165-219)||(46477204-46477258)
chr7 (154-212)||(48590607-48590665)
chr7 (182-223)||(9503984-9504025)
chr7 (182-219)||(23736087-23736124)
chr7 (154-219)||(24166131-24166196)
chr7 (182-223)||(27234869-27234910)
chr7 (154-219)||(27940760-27940825)
chr7 (182-219)||(31669871-31669908)
chr7 (178-219)||(31857154-31857195)
chr7 (182-239)||(35160744-35160801)
chr7 (184-229)||(48392871-48392916)
chr7 (182-219)||(48590673-48590710)
chr7 (190-222)||(9503902-9503934)
chr7 (172-224)||(11676914-11676966)
chr7 (173-241)||(11677018-11677086)
chr7 (183-219)||(43067118-43067154)
[»] chr3 (44 HSPs)
chr3 (54-126)||(6588544-6588615)
chr3 (73-122)||(1194114-1194163)
chr3 (77-122)||(11503699-11503744)
chr3 (77-122)||(47861797-47861842)
chr3 (77-122)||(47862461-47862506)
chr3 (77-122)||(48222346-48222391)
chr3 (77-122)||(48223003-48223048)
chr3 (77-122)||(53302970-53303015)
chr3 (77-122)||(53303634-53303679)
chr3 (182-238)||(20821437-20821493)
chr3 (178-238)||(24599875-24599935)
chr3 (178-241)||(40504150-40504213)
chr3 (160-219)||(47900264-47900323)
chr3 (163-238)||(54690434-54690509)
chr3 (52-122)||(11504362-11504432)
chr3 (182-240)||(22995690-22995748)
chr3 (182-219)||(31578822-31578859)
chr3 (158-219)||(34205578-34205639)
chr3 (178-219)||(35760823-35760864)
chr3 (161-222)||(40504078-40504139)
chr3 (182-238)||(3022745-3022801)
chr3 (77-117)||(30733632-30733672)
chr3 (190-241)||(25995638-25995689)
chr3 (165-224)||(29352738-29352797)
chr3 (52-118)||(6589314-6589379)
chr3 (160-238)||(24599945-24600023)
chr3 (182-240)||(43333913-43333971)
chr3 (182-240)||(44414061-44414119)
chr3 (177-219)||(51522316-51522358)
chr3 (178-219)||(5790664-5790705)
chr3 (89-122)||(11195828-11195861)
chr3 (160-229)||(26043255-26043324)
chr3 (182-219)||(32814716-32814753)
chr3 (178-219)||(40760786-40760827)
chr3 (154-219)||(47342642-47342707)
chr3 (154-211)||(51760229-51760286)
chr3 (158-219)||(54680504-54680565)
chr3 (178-219)||(54690522-54690563)
chr3 (182-222)||(9447906-9447945)
chr3 (178-242)||(12569186-12569250)
chr3 (178-242)||(13545650-13545714)
chr3 (155-219)||(17072618-17072682)
chr3 (165-229)||(32956423-32956487)
chr3 (165-229)||(34935543-34935607)
[»] chr4 (65 HSPs)
chr4 (53-122)||(2520305-2520374)
chr4 (73-119)||(25699307-25699353)
chr4 (55-121)||(29379722-29379788)
chr4 (54-122)||(29380472-29380540)
chr4 (161-240)||(55131603-55131682)
chr4 (77-123)||(49604093-49604139)
chr4 (77-122)||(4206228-4206273)
chr4 (77-122)||(4206885-4206930)
chr4 (77-122)||(39232125-39232170)
chr4 (77-122)||(51539843-51539888)
chr4 (77-122)||(51540507-51540552)
chr4 (161-223)||(16450170-16450232)
chr4 (52-122)||(49603414-49603484)
chr4 (77-122)||(2519578-2519623)
chr4 (77-122)||(39232788-39232833)
chr4 (79-124)||(42020403-42020448)
chr4 (78-122)||(46513673-46513717)
chr4 (160-219)||(9802930-9802989)
chr4 (160-239)||(30051338-30051417)
chr4 (190-224)||(11643637-11643671)
chr4 (182-224)||(16391520-16391562)
chr4 (182-224)||(16391762-16391804)
chr4 (182-224)||(16392027-16392069)
chr4 (182-220)||(30162699-30162737)
chr4 (178-224)||(31988525-31988571)
chr4 (161-239)||(37175499-37175577)
chr4 (182-240)||(50038538-50038596)
chr4 (182-240)||(50045760-50045818)
chr4 (161-222)||(11511735-11511796)
chr4 (182-239)||(37306826-37306883)
chr4 (178-223)||(39017574-39017619)
chr4 (182-239)||(46996562-46996619)
chr4 (182-239)||(49806353-49806410)
chr4 (182-238)||(9968297-9968353)
chr4 (160-224)||(26206660-26206724)
chr4 (183-223)||(34458996-34459036)
chr4 (160-224)||(39294183-39294247)
chr4 (160-224)||(44639756-44639820)
chr4 (182-222)||(50519350-50519390)
chr4 (182-238)||(55131532-55131588)
chr4 (160-219)||(33084732-33084791)
chr4 (160-238)||(11583703-11583781)
chr4 (182-224)||(16391263-16391305)
chr4 (172-238)||(37431968-37432034)
chr4 (176-242)||(39754181-39754247)
chr4 (190-240)||(50533180-50533230)
chr4 (77-114)||(14090741-14090778)
chr4 (182-223)||(16450247-16450288)
chr4 (182-219)||(23329385-23329422)
chr4 (182-219)||(24529588-24529625)
chr4 (160-229)||(30162616-30162685)
chr4 (182-219)||(34595705-34595742)
chr4 (182-239)||(37381139-37381196)
chr4 (178-219)||(38938056-38938097)
chr4 (182-219)||(43964977-43965014)
chr4 (78-118)||(2528674-2528714)
chr4 (160-240)||(11643529-11643609)
chr4 (182-222)||(15185913-15185953)
chr4 (154-238)||(24156135-24156219)
chr4 (182-222)||(34459073-34459113)
chr4 (179-239)||(34827468-34827527)
chr4 (182-222)||(36886363-36886403)
chr4 (179-219)||(37306631-37306671)
chr4 (178-238)||(42184723-42184783)
chr4 (190-238)||(44495686-44495734)
[»] chr2 (56 HSPs)
chr2 (54-122)||(37644404-37644472)
chr2 (54-121)||(21647599-21647666)
chr2 (54-122)||(29982150-29982218)
chr2 (54-122)||(29982901-29982969)
chr2 (54-121)||(21648351-21648418)
chr2 (52-122)||(22424719-22424789)
chr2 (77-122)||(1389084-1389129)
chr2 (54-119)||(37645158-37645223)
chr2 (160-239)||(5204887-5204966)
chr2 (73-121)||(15321830-15321879)
chr2 (77-122)||(22424055-22424100)
chr2 (190-239)||(30202479-30202528)
chr2 (176-221)||(37980670-37980715)
chr2 (182-231)||(38261995-38262044)
chr2 (163-219)||(5204989-5205045)
chr2 (52-111)||(15167822-15167881)
chr2 (165-219)||(35607430-35607484)
chr2 (182-240)||(42142029-42142087)
chr2 (154-219)||(25668471-25668536)
chr2 (182-239)||(29573902-29573959)
chr2 (182-219)||(35607488-35607525)
chr2 (178-219)||(45123879-45123920)
chr2 (182-226)||(9665121-9665165)
chr2 (182-238)||(32070457-32070513)
chr2 (160-219)||(2795376-2795435)
chr2 (190-241)||(4101941-4101992)
chr2 (182-229)||(40739580-40739627)
chr2 (182-229)||(41823746-41823793)
chr2 (165-219)||(5144339-5144393)
chr2 (178-224)||(10237611-10237657)
chr2 (182-220)||(13477196-13477234)
chr2 (185-239)||(22444927-22444981)
chr2 (182-240)||(36490567-36490625)
chr2 (158-224)||(42579083-42579149)
chr2 (182-223)||(3227534-3227575)
chr2 (154-222)||(14384692-14384761)
chr2 (160-229)||(19250180-19250249)
chr2 (158-219)||(20195304-20195365)
chr2 (158-219)||(24971269-24971330)
chr2 (78-127)||(25217084-25217133)
chr2 (155-212)||(27327852-27327909)
chr2 (154-219)||(29771778-29771843)
chr2 (160-229)||(32070527-32070596)
chr2 (182-223)||(37980602-37980643)
chr2 (160-229)||(40739497-40739566)
chr2 (182-222)||(921904-921944)
chr2 (182-242)||(4898157-4898217)
chr2 (182-242)||(4945551-4945611)
chr2 (176-224)||(5717882-5717930)
chr2 (179-219)||(8382883-8382923)
chr2 (178-222)||(13388941-13388985)
chr2 (86-122)||(15322641-15322677)
chr2 (182-238)||(27327918-27327974)
chr2 (155-239)||(27743677-27743761)
chr2 (158-242)||(33363623-33363707)
chr2 (182-222)||(36013536-36013576)
[»] chr1 (54 HSPs)
chr1 (54-122)||(35814028-35814096)
chr1 (54-122)||(45880754-45880822)
chr1 (54-121)||(9088440-9088507)
chr1 (54-121)||(45881506-45881573)
chr1 (73-122)||(32517560-32517609)
chr1 (52-121)||(35813290-35813358)
chr1 (54-118)||(9087688-9087752)
chr1 (182-241)||(31634480-31634539)
chr1 (77-122)||(250361-250406)
chr1 (77-122)||(36180408-36180453)
chr1 (77-122)||(47708507-47708552)
chr1 (54-121)||(32516809-32516876)
chr1 (52-122)||(11625971-11626041)
chr1 (77-122)||(249704-249749)
chr1 (77-122)||(11625307-11625352)
chr1 (77-122)||(36179737-36179782)
chr1 (154-239)||(47991772-47991857)
chr1 (190-239)||(48636814-48636863)
chr1 (159-219)||(3160815-3160875)
chr1 (178-222)||(15013669-15013713)
chr1 (182-229)||(49753092-49753139)
chr1 (182-241)||(52880003-52880062)
chr1 (160-242)||(21909833-21909915)
chr1 (182-219)||(2091761-2091798)
chr1 (182-239)||(11343751-11343808)
chr1 (182-239)||(11501771-11501828)
chr1 (188-240)||(15054974-15055027)
chr1 (158-219)||(26856037-26856098)
chr1 (154-219)||(48605085-48605150)
chr1 (182-222)||(34598950-34598990)
chr1 (158-241)||(1344432-1344515)
chr1 (182-241)||(21852430-21852489)
chr1 (182-241)||(24023453-24023512)
chr1 (160-238)||(1358168-1358246)
chr1 (165-219)||(12993622-12993676)
chr1 (172-222)||(47293196-47293246)
chr1 (179-225)||(48380635-48380681)
chr1 (182-219)||(3160765-3160802)
chr1 (184-229)||(23392627-23392672)
chr1 (158-219)||(26660659-26660720)
chr1 (158-219)||(27549109-27549170)
chr1 (182-223)||(28237083-28237124)
chr1 (182-219)||(34038008-34038045)
chr1 (154-219)||(40907194-40907259)
chr1 (178-219)||(48376817-48376858)
chr1 (182-219)||(48605158-48605195)
chr1 (151-223)||(1252142-1252214)
chr1 (164-240)||(15401868-15401944)
chr1 (160-224)||(28237138-28237201)
chr1 (182-222)||(39015575-39015615)
chr1 (77-117)||(42308899-42308939)
chr1 (179-219)||(47418160-47418200)
chr1 (179-219)||(48376890-48376930)
chr1 (182-222)||(50998316-50998356)
[»] chr8 (44 HSPs)
chr8 (54-121)||(39774316-39774383)
chr8 (53-122)||(39773563-39773632)
chr8 (161-238)||(41177954-41178031)
chr8 (54-122)||(5157229-5157297)
chr8 (54-122)||(5157973-5158041)
chr8 (52-122)||(44445964-44446034)
chr8 (77-123)||(44446643-44446689)
chr8 (77-122)||(5156573-5156618)
chr8 (77-122)||(28824146-28824191)
chr8 (77-122)||(28824802-28824847)
chr8 (77-122)||(29555529-29555574)
chr8 (77-122)||(29556192-29556237)
chr8 (77-122)||(38376228-38376273)
chr8 (158-238)||(39655481-39655561)
chr8 (172-238)||(3270568-3270634)
chr8 (160-238)||(34188384-34188462)
chr8 (160-240)||(43483998-43484078)
chr8 (158-241)||(39655410-39655493)
chr8 (154-219)||(1647100-1647165)
chr8 (182-219)||(10150884-10150921)
chr8 (54-111)||(14857947-14858004)
chr8 (178-219)||(35969746-35969787)
chr8 (159-219)||(1875703-1875763)
chr8 (160-224)||(5040078-5040142)
chr8 (165-220)||(2552869-2552924)
chr8 (190-229)||(4274675-4274714)
chr8 (184-219)||(10150937-10150972)
chr8 (160-219)||(37922827-37922886)
chr8 (160-239)||(44838769-44838848)
chr8 (165-219)||(4274606-4274660)
chr8 (182-228)||(42835684-42835730)
chr8 (178-219)||(11302027-11302068)
chr8 (178-219)||(11302974-11303015)
chr8 (158-219)||(29730751-29730812)
chr8 (160-229)||(32241753-32241822)
chr8 (182-219)||(34188333-34188370)
chr8 (182-219)||(35063548-35063585)
chr8 (77-122)||(38376892-38376936)
chr8 (182-239)||(38884034-38884091)
chr8 (190-238)||(2552798-2552846)
chr8 (182-222)||(5918259-5918299)
chr8 (180-224)||(30805042-30805086)
chr8 (183-219)||(32241836-32241872)
chr8 (182-222)||(44282277-44282317)
[»] chr5 (57 HSPs)
chr5 (54-121)||(3341584-3341651)
chr5 (54-121)||(3358493-3358560)
chr5 (54-121)||(3342336-3342403)
chr5 (54-121)||(3359245-3359312)
chr5 (77-122)||(2600853-2600898)
chr5 (77-122)||(4276249-4276294)
chr5 (77-122)||(31230115-31230160)
chr5 (78-122)||(4275587-4275631)
chr5 (182-240)||(23117484-23117542)
chr5 (77-122)||(2601517-2601562)
chr5 (154-239)||(14064805-14064890)
chr5 (77-122)||(31229451-31229496)
chr5 (161-219)||(13420449-13420507)
chr5 (179-221)||(25257156-25257198)
chr5 (179-221)||(25320946-25320988)
chr5 (178-239)||(4151146-4151207)
chr5 (165-238)||(9984992-9985065)
chr5 (182-239)||(13420522-13420579)
chr5 (182-239)||(34148028-34148085)
chr5 (182-239)||(36441088-36441145)
chr5 (157-238)||(39916348-39916429)
chr5 (161-229)||(15966710-15966778)
chr5 (182-238)||(27990445-27990501)
chr5 (182-222)||(33998232-33998272)
chr5 (160-240)||(43585561-43585641)
chr5 (182-229)||(1723248-1723295)
chr5 (182-229)||(9984926-9984973)
chr5 (177-224)||(16018521-16018568)
chr5 (160-223)||(32067978-32068041)
chr5 (154-205)||(40905924-40905975)
chr5 (182-236)||(1723331-1723385)
chr5 (181-239)||(6638225-6638283)
chr5 (165-219)||(21163601-21163655)
chr5 (182-240)||(22584320-22584378)
chr5 (154-212)||(31787240-31787298)
chr5 (160-238)||(34186421-34186499)
chr5 (158-219)||(9246977-9247038)
chr5 (182-219)||(15965971-15966008)
chr5 (155-240)||(16056806-16056891)
chr5 (182-219)||(21152603-21152640)
chr5 (182-219)||(21159738-21159775)
chr5 (182-219)||(21163545-21163582)
chr5 (158-219)||(24433599-24433660)
chr5 (176-229)||(25596496-25596549)
chr5 (158-219)||(27304801-27304862)
chr5 (182-239)||(29112279-29112336)
chr5 (155-216)||(31947468-31947529)
chr5 (182-219)||(36346804-36346841)
chr5 (182-219)||(36964245-36964282)
chr5 (179-236)||(43340500-43340557)
chr5 (77-117)||(5233785-5233825)
chr5 (182-238)||(9087594-9087650)
chr5 (183-219)||(10832445-10832481)
chr5 (182-229)||(12165288-12165336)
chr5 (165-229)||(21916932-21916996)
chr5 (182-238)||(29112363-29112419)
chr5 (165-229)||(32146832-32146896)
[»] scaffold0181 (2 HSPs)
scaffold0181 (73-121)||(18060-18108)
scaffold0181 (54-122)||(17308-17376)
[»] chr6 (29 HSPs)
chr6 (54-122)||(26275427-26275495)
chr6 (52-122)||(305645-305715)
chr6 (77-122)||(304995-305040)
chr6 (77-122)||(644122-644167)
chr6 (77-122)||(644778-644823)
chr6 (73-122)||(19803396-19803445)
chr6 (77-122)||(33775590-33775635)
chr6 (77-122)||(33776246-33776291)
chr6 (160-231)||(26498659-26498730)
chr6 (77-122)||(23950049-23950094)
chr6 (77-122)||(26276177-26276222)
chr6 (184-223)||(15467584-15467623)
chr6 (158-224)||(2693672-2693738)
chr6 (178-223)||(7756503-7756548)
chr6 (182-219)||(9908224-9908261)
chr6 (77-122)||(22509775-22509820)
chr6 (182-238)||(5433419-5433475)
chr6 (178-229)||(3418840-3418891)
chr6 (154-241)||(9908129-9908216)
chr6 (160-219)||(32786182-32786241)
chr6 (184-238)||(3343867-3343921)
chr6 (190-240)||(7498425-7498475)
chr6 (160-238)||(13902019-13902097)
chr6 (160-238)||(29938346-29938424)
chr6 (160-238)||(31759390-31759468)
chr6 (182-219)||(3418771-3418808)
chr6 (78-127)||(19693835-19693884)
chr6 (182-219)||(32161579-32161616)
chr6 (151-223)||(13853055-13853127)
[»] scaffold0223 (1 HSPs)
scaffold0223 (160-221)||(26643-26704)
[»] scaffold0047 (2 HSPs)
scaffold0047 (182-222)||(63526-63566)
scaffold0047 (182-222)||(63450-63490)
[»] scaffold0178 (2 HSPs)
scaffold0178 (78-127)||(4772-4821)
scaffold0178 (76-122)||(5144-5190)
[»] scaffold0531 (1 HSPs)
scaffold0531 (182-238)||(7002-7058)
[»] scaffold0013 (1 HSPs)
scaffold0013 (182-222)||(58388-58428)
[»] scaffold1786 (1 HSPs)
scaffold1786 (184-229)||(515-560)
[»] scaffold0070 (1 HSPs)
scaffold0070 (182-219)||(42655-42692)
[»] scaffold0019 (1 HSPs)
scaffold0019 (182-219)||(45536-45573)
[»] scaffold0011 (1 HSPs)
scaffold0011 (147-219)||(232-304)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 48843123 - 48843362
Alignment:
Q  1 tggcccaacgatcattgggattaatacaaagccctcactagcttttagaagtggaggattactttatagccaccctcaatatctctttaggccccctaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48843123 tggcccaacgatcattgggattaatacaaagccctcactagcttttagaagtggaggattgctttatagccaccctcaatatctctttaggccccctaaa 48843222  T
Q  101 aatacg-aaaataacctttataaaacgtattttgcaccttcggtatgtacatacgtgatccatattatggaacacgtgcattattaattaaatgaaccta 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||||||||||  || |||||||    
T  48843223 aatacgaaaaataacctttataaaacgtattttgcaccttcggtatgtacatatgtggtacatattatggaccacgtgcattattaatcgaacgaaccta 48843322  T
Q  200 aaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  48843323 aaaagtcaaatttgcttataattaagaacgaatggagtat 48843362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 7331110 - 7331178
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7331110 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 7331178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 7331929 - 7331862
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7331929 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 7331862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 33255717 - 33255787
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33255717 tggaagattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 33255787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 47942032 - 47942077
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47942032 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47942077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 47942733 - 47942688
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47942733 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47942688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 47948163 - 47948118
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47948163 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47948118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 30405017 - 30404958
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||    
T  30405017 attaattgaatgaacctaaaaagttaaatttacttatattttagaacggatggagtatta 30404958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 13846762 - 13846704
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| ||||||||||    
T  13846762 attaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggatggagtatt 13846704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 27234946 - 27234987
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  27234946 attaattgaatgaacctaaaaagtcaaatttacttataatta 27234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 33256451 - 33256406
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  33256451 caatatctctttaggccccctaaaagtacaaaaataacctttataa 33256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 24211630 - 24211566
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||| | ||| | ||||||||||| |||||| ||||||||| |||||||||||||    
T  24211630 tgatccatattatgaaccacatacattattaattgaatgaatctaaaaagtaaaatttacttata 24211566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 31724241 - 31724173
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | |||||||||||| |||||||||| ||||||||| ||||||| ||||||||    
T  31724241 gaggattgctttttaggccccctcaatatctatttaggccccttaaaaatacaaaaataatctttataa 31724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 39728636 - 39728711
Alignment:
Q  164 ttatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| ||| | |||||||||| |||||||| |||||||| ||||||||||||| |||  |||| |||||||||    
T  39728636 ttatggaccacatacattattaatgaaatgaacttaaaaagtaaaatttacttatatttagaaacggatggagtat 39728711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 40116214 - 40116151
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||||||| ||| | ||| ||||||| ||||||||||||||||| ||||| ||||||||||    
T  40116214 catattatggaccacatacatcattaattgaatgaacctaaaaagtcgaatttgcttataatta 40116151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 17882784 - 17882702
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||||||  | ||| ||||| ||||||||||||||| |||||||| ||||||||||||| || | || | ||||||||||    
T  17882784 tccatattataaatcacatgcatcattaattaaatgaacttaaaaagtaaaatttacttatattttaaaagggatggagtatt 17882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 23092410 - 23092364
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||    
T  23092410 cattattaattaaatgaacttaaaaagttaaatttgcttataattaa 23092364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 16959640 - 16959595
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||    
T  16959640 caatatctctttaggctccctaaaaatatgaaaataacttttataa 16959595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 34151596 - 34151653
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaat 111  Q
    ||||||| |||| ||| | |||||||||||||||||||||||||||| |||| |||||    
T  34151596 gaggattgctttttaggccccctcaatatctctttaggccccctaaagatacaaaaat 34151653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 34175528 - 34175471
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaat 111  Q
    ||||||| |||| ||| | |||||||||||||||||||||||||||| |||| |||||    
T  34175528 gaggattgctttttaggccccctcaatatctctttaggccccctaaagatacaaaaat 34175471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 20353109 - 20353053
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||||| |||||| |||||| |||| |||| ||||||||    
T  20353109 attaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggatggagta 20353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 3177360 - 3177325
Alignment:
Q  194 aacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||| |||||||||||||||||||||||||    
T  3177360 aacctaaaaaatcaaatttacttataattaagaacg 3177325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 3498365 - 3498419
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||||||| |||||||||||||||| |||||||||||||    
T  3498365 tatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttata 3498419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 11032369 - 11032431
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||| | |||||||||    
T  11032369 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatctgcttataatt 11032431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 16941130 - 16941088
Alignment:
Q  80 tatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||    
T  16941130 tatctctttaggctccctaaaaatatgaaaataacttttataa 16941088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 28289563 - 28289605
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||    
T  28289563 attaattgaatgaacttaaaaagtcaattttacttataattaa 28289605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 31671052 - 31670994
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||| |||| | ||||||||    
T  31671052 attaattgaatgaacataaaaagtaaaatttacttatatttaaaaacggagggagtatt 31670994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 37066249 - 37066307
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  37066249 atattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 37066307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 40116224 - 40116274
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaac 228  Q
    |||| |||||| ||||||||||||||||||||||| ||| |||||| ||||    
T  40116224 cattcttaattgaatgaacctaaaaagtcaaatttgcttgtaattaggaac 40116274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 42061821 - 42061779
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||    
T  42061821 attaaataaatgaacctaaaaagtcaattttacttatatttaa 42061779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 46477204 - 46477258
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||||||| |||||||||||||||| |||||||||||||    
T  46477204 tatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttata 46477258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 48590665 - 48590607
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaattt 212  Q
    ||||| ||||||||||| ||| | ||| ||||||| |||||||||||||||| ||||||    
T  48590665 gtgattcatattatggaccacatacatcattaatttaatgaacctaaaaagtaaaattt 48590607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 9503984 - 9504025
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||||||||||| ||||||||| |||||| ||||||||||    
T  9503984 attaattaaatgaatctaaaaagttaaatttgcttataatta 9504025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23736087 - 23736124
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||||||||||||| || ||||||||||    
T  23736087 attaattaaatgaacctaaaaagttaattttacttata 23736124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 24166196 - 24166131
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| | ||| | ||| ||||| |||||||||||||||||| |  ||||||||||    
T  24166196 gtgatccatattatgaaccacatacatcattaaataaatgaacctaaaaagtaatttttacttata 24166131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 27234910 - 27234869
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||| |||||||||||||||| |||||| ||||||||||    
T  27234910 attaattgaatgaacctaaaaagtaaaatttgcttataatta 27234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 27940825 - 27940760
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| | ||| | ||| ||||||| |||||||||||||| | |||||| ||||||    
T  27940825 gtgatccatattatgaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttata 27940760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 31669871 - 31669908
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  31669871 attaaataaatgaacctaaaaagtcaattttacttata 31669908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 31857154 - 31857195
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||    
T  31857154 cattattaaataaatgaacctaaaaagtcaattttgcttata 31857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 35160801 - 35160744
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| ||||||||||||||||||| ||| |||||| |||  |||| |||||||||    
T  35160801 attaattgaatgaacctaaaaagtcaattttgcttatatttagaaacggatggagtat 35160744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 48392916 - 48392871
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  48392916 taattaaatgaatctaaaaagtaaaatttgcttataattaaaaacg 48392871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 48590673 - 48590710
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  48590673 attaattgaatgaacttaaaaagtcaaatttacttata 48590710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 9503934 - 9503902
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataatt 222  Q
    |||||||||||||||| ||||||||||||||||    
T  9503934 aatgaacctaaaaagtaaaatttacttataatt 9503902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 11676966 - 11676914
Alignment:
Q  172 cacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||| ||| ||||||| |||||||||||||| |||| ||| |||||||||||    
T  11676966 cacgtacatcattaattgaatgaacctaaaaaatcaattttgcttataattaa 11676914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 11677018 - 11677086
Alignment:
Q  173 acgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    |||| ||| ||||||| |||||||||||||| | || ||| ||||||||||| |||| | |||||||||    
T  11677018 acgtacatcattaattgaatgaacctaaaaaattaattttgcttataattaaaaacggagggagtatta 11677086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 43067118 - 43067154
Alignment:
Q  183 ttaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| |||||||||||||||| |||||||||||||    
T  43067118 ttaattgaatgaacctaaaaagtaaaatttacttata 43067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 6588544 - 6588615
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataaaacg 126  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6588544 gaggattgctttttagcc-ccctcaatatctctttaggccccctaaaaatacaaaaataacctttataaaacg 6588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 1194114 - 1194163
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  1194114 ccctcaatatctctttaggccccccaaaaatacaaaaataacctttataa 1194163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 11503699 - 11503744
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11503699 caatatctctttaggccccctaaaaatacaaaaataacctttataa 11503744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 47861797 - 47861842
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47861797 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47861842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 47862506 - 47862461
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47862506 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 48222346 - 48222391
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  48222346 caatatctctttaggccccctaaaaatacaaaaataacctttataa 48222391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 48223048 - 48223003
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  48223048 caatatctctttaggccccctaaaaatacaaaaataacctttataa 48223003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 53302970 - 53303015
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  53302970 caatatctctttaggccccctaaaaatacaaaaataacctttataa 53303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 53303679 - 53303634
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  53303679 caatatctctttaggccccctaaaaatacaaaaataacctttataa 53303634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 20821493 - 20821437
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||| |||| ||||||||    
T  20821493 attaattgaatgaacctaaaaagtcaaatttgcttatgattaaaaacggatggagta 20821437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 24599935 - 24599875
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| |||||||||||||||| |||||| |||||| ||| ||||| ||||||||    
T  24599935 cattattaattgaatgaacctaaaaagtaaaatttgcttatatttaggaacggatggagta 24599875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 40504150 - 40504213
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||| ||||| ||  ||||||||    
T  40504150 cattattaattgaatgaacataaaaagtcaaatttgcttataattgagaacaaagtgagtatta 40504213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 47900323 - 47900264
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||||||||||    
T  47900323 catattatggaccacatacataattaattcaatgaacctaaaaagtaaaatttacttata 47900264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 54690509 - 54690434
Alignment:
Q  163 attatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||| ||| | ||| ||||||| ||||||| ||||||||||||||| |||||| ||||||||| | ||||||    
T  54690509 attatggaccacatacatcattaattgaatgaacataaaaagtcaaatttgcttatatttaagaacggagggagta 54690434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 11504432 - 11504362
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| |||||||| |||||||||| ||||||||| ||||||||||||||||    
T  11504432 tggaagattgctttttaggctcccccaatatctttttaggccccttaaaaatacaaaaataacctttataa 11504362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 22995748 - 22995690
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||| | ||||||||    
T  22995748 attaattaaatgaacctaaaaagtaaaatttacttatatttagaaacggagggagtatt 22995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 31578859 - 31578822
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||||||||||| |||||||||||||||    
T  31578859 attaattaaatgaacctaaaaaatcaaatttacttata 31578822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 34205639 - 34205578
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| ||||| ||||||| |||||||||||||||| |||||| ||||||    
T  34205639 tccatattatgaatcacatgcatcattaattgaatgaacctaaaaagtaaaatttgcttata 34205578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 35760823 - 35760864
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  35760823 cattattaattaaatgaatctaaaaagtaaaatttacttata 35760864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 40504139 - 40504078
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    |||||||||| ||| | ||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  40504139 atattatggatcacatacatcattaattgaatgaaccttaaaaatcaaatttacttataatt 40504078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 3022801 - 3022745
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||  |||||| ||||||||||||||||||||||||||| |||| || |||||    
T  3022801 attaattgcatgaacataaaaagtcaaatttacttataattaacaacggatagagta 3022745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 30733632 - 30733672
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctt 117  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  30733632 caatatctctttaggccccctaaaaatacaaaattaacctt 30733672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 25995638 - 25995689
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||||||||||||||||||| |||||| |||| |||| | |||||||||    
T  25995638 aatgaacctaaaaagtcaaatttgcttatatttaaaaacggagggagtatta 25995689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 29352797 - 29352738
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    |||||| ||| | ||||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  29352797 tatggatcacatacattattaaataaatgaacctaaaaagtcaattttgcttatatttaa 29352738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 6589379 - 6589314
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataaccttt 118  Q
    ||||||||| | || ||| | ||||| ||||||||||||||||| | ||||||||||||||||||||    
T  6589379 tggaggattgccttttaggccccctcgatatctctttaggccccgt-aaaatacgaaaataaccttt 6589314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 24599945 - 24600023
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||| ||||| ||| | ||| ||||||| ||| |||||||||||| |||||| |||||| ||||||||| | ||||||    
T  24599945 catataatggaccacatacatcattaattgaataaacctaaaaagtaaaatttgcttatatttaagaacggagggagta 24600023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 43333971 - 43333913
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| ||||||||||||| || ||||||||||||| |||| |||| | ||||||||    
T  43333971 attaattgaatgaacctaaaacgtaaaatttacttatatttaaaaacggaaggagtatt 43333913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 44414061 - 44414119
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| ||||||||||||||  ||| ||||||||||||||| |||||| | ||||||    
T  44414061 attaatttaatgaacctaaaaaaccaattttacttataattaaaaacgaaggcagtatt 44414119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 51522358 - 51522316
Alignment:
Q  177 gcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||    
T  51522358 gcataattaattgaatgaacctaaaaagtcaaatatacttata 51522316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 5790705 - 5790664
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| |||||||||||||||| |||||| ||||||    
T  5790705 cattattaattgaatgaacctaaaaagtaaaatttgcttata 5790664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 11195861 - 11195828
Alignment:
Q  89 aggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  11195861 aggccccctaaaaatacaaaaataacctttataa 11195828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 26043324 - 26043255
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||| |||||| || || ||| ||||||| |||||| ||||||||| ||||||||||||| |||| ||||    
T  26043324 cataatatggaccatgtacatcattaattcaatgaatctaaaaagtaaaatttacttatatttaaaaacg 26043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 32814716 - 32814753
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  32814716 attaattgaatgaacctaaaaagtcaaatttgcttata 32814753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 40760827 - 40760786
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| |||||||||||||| |||| ||||||||||    
T  40760827 cattattaattgaatgaacctaaaaaatcaattttacttata 40760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 47342642 - 47342707
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| | ||| | ||| ||||| |||||||||||||||||| || ||| ||||||    
T  47342642 gtgatccatattatgaaccacatacatcattaaataaatgaacctaaaaagtaaattttgcttata 47342707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 51760229 - 51760286
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatt 211  Q
    ||||| ||||||||| | ||| | ||| |||||||||||||||||||||| |||||||    
T  51760229 gtgattcatattatgaaccacatacatcattaattaaatgaacctaaaaaatcaaatt 51760286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 54680565 - 54680504
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||| ||||||||||| |||||||||||||    
T  54680565 tccatattatgaatcacatacatcattaattgaatgtacctaaaaagtaaaatttacttata 54680504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 54690522 - 54690563
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||    
T  54690522 cattattaattgaataaacctaaaaagtcaaatttgcttata 54690563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 9447906 - 9447945
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  9447906 attaattgaatgaacctaaaaagtcaaattt-cttataatt 9447945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 12569186 - 12569250
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||||||||| |||||| ||||||||| |||||| |||||| || | |||| | ||||||||||    
T  12569186 cattattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagtattat 12569250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 13545650 - 13545714
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||||||||| |||||| ||||||||| |||||| |||||| || | |||| | ||||||||||    
T  13545650 cattattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagtattat 13545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 17072682 - 17072618
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||| | ||| |  || || ||||||||||||||||||||| |||||| ||||||    
T  17072682 tgatccatattatgaaccacatatatcatcaattaaatgaacctaaaaagtaaaatttgcttata 17072618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 32956487 - 32956423
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||| ||| | ||| ||||| ||||||||||||||||||||| ||| |||||| |||| ||||    
T  32956487 tatggaccacatacatcattaaataaatgaacctaaaaagtcaattttgcttatatttaaaaacg 32956423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 34935607 - 34935543
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||| ||| | ||| ||||||| |||||||||||||||| |||||| |||||| |||| ||||    
T  34935607 tatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacg 34935543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 2520374 - 2520305
Alignment:
Q  53 ggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2520374 ggaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 2520305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 25699307 - 25699353
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaatacgaaaataaccttta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25699307 ccctcaatatctctttaggccccctaaaaatacgaaaataaccttta 25699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 29379722 - 29379788
Alignment:
Q  55 aggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    |||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29379722 aggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 29379788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 29380540 - 29380472
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  29380540 gaggattgctttttaggccccctcaatatctctttaggtcccctaaaaatacaaaaataacctttataa 29380472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 55131603 - 55131682
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    |||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||||||| |||| ||||||||||    
T  55131603 atattatggagcacatacataattaattgaatgaacctaaaaagttaaatttgcttataattaacaacggatggagtatt 55131682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 49604139 - 49604093
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataaa 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  49604139 caatatctctttaggccccctaaaaatacaaaaataacctttataaa 49604093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 4206228 - 4206273
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4206228 caatatctctttaggccccctaaaaatacaaaaataacctttataa 4206273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 4206930 - 4206885
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4206930 caatatctctttaggccccctaaaaatacaaaaataacctttataa 4206885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 39232125 - 39232170
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39232125 caatatctctttaggccccctaaaaatacaaaaataacctttataa 39232170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 51539843 - 51539888
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51539843 caatatctctttaggccccctaaaaatacaaaaataacctttataa 51539888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 51540552 - 51540507
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51540552 caatatctctttaggccccctaaaaatacaaaaataacctttataa 51540507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 16450232 - 16450170
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||||||| ||| ||||| ||||||||||| ||||||||||||||||||| | ||||||||    
T  16450232 atattatggatcacatgcatcattaattaaataaacctaaaaagtcaaatttgcatataatta 16450170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 49603414 - 49603484
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  49603414 tggaagattgctttttaggcccccccaatatctctttaagccccctaaaaatacaaaaataacctttataa 49603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 2519578 - 2519623
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2519578 caatatctctttaggccccttaaaaatacaaaaataacctttataa 2519623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 39232833 - 39232788
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  39232833 caatatctctttaggccccctaaaaatacaaaaataatctttataa 39232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 42020403 - 42020448
Alignment:
Q  79 atatctctttaggccccctaaaaatacgaaaataacctttataaaa 124  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  42020403 atatctatttaggccccctaaaaatacgaaaataatctttataaaa 42020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 46513717 - 46513673
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  46513717 aatatctctttaggccccctaaaaatacaaaaataatctttataa 46513673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 9802989 - 9802930
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||| | || ||||||||||    
T  9802989 catattatgaaacacgtacattattaattaaatgaacctacaaaattaattttacttata 9802930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 30051417 - 30051338
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||| |||||| ||||| ||| ||||||| |||||||||||||||| |||||| |||||| || | |||| |||||||||    
T  30051417 cataatatggaccacgtacatcattaattgaatgaacctaaaaagttaaatttgcttatattttaaaacggatggagtat 30051338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 11643637 - 11643671
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaa 224  Q
    |||||||||||||||||||||||||||||||||||    
T  11643637 aatgaacctaaaaagtcaaatttacttataattaa 11643671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 16391520 - 16391562
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  16391520 attaattaaataaacctaaaaagtcaaatttacttctaattaa 16391562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 16391762 - 16391804
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  16391762 attaattgaataaacctaaaaagtcaaatttacttataattaa 16391804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 16392027 - 16392069
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  16392027 attaattaaataaacctaaaaagtcaaatttacttctaattaa 16392069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 30162699 - 30162737
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataa 220  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  30162699 attaattgaatgaacctaaaaagtcaaatttacttataa 30162737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 31988571 - 31988525
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  31988571 cattattaattgaatgaacttaaaaagttaaatttacttataattaa 31988525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 37175499 - 37175577
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||| ||| | |||| |||||| |||||||||||||| | ||||||  |||||||||  ||||||||||||||    
T  37175499 atattatggaccacatacattgttaattgaatgaacctaaaaatttaaatttgtttataattagcaacgaatggagtat 37175577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 50038538 - 50038596
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| | ||||||||    
T  50038538 attaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggaaggagtatt 50038596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 50045760 - 50045818
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| | ||||||||    
T  50045760 attaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggaaggagtatt 50045818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 11511735 - 11511796
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||| |||| ||| | ||| |||||||||||||||||||||||| |||||| |||||||||    
T  11511735 atattgtggaccacatacatcattaattaaatgaacctaaaaagttaaatttgcttataatt 11511796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 37306883 - 37306826
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||||| |||||| |||||| |||  |||| |||||||||    
T  37306883 attaattaaatgaacctaaaaagtaaaatttgcttatatttagaaacggatggagtat 37306826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 39017574 - 39017619
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  39017574 cattattaattgaatgaacataaaaagtcaaattttcttataatta 39017619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 46996562 - 46996619
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||||||| | |||||||    
T  46996562 attaattaaatgaacctaaaaagtaaaatttgtttatatttaagaacggaaggagtat 46996619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 49806410 - 49806353
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||| |||||||||| | |||||||||| |||  ||||||||||||||    
T  49806410 attaattaaatgaatctaaaaagtcgattttacttatatttagaaacgaatggagtat 49806353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 9968353 - 9968297
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| |||| | ||||||    
T  9968353 attaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagta 9968297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 26206660 - 26206724
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    |||| |||||| ||| | ||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  26206660 cataatatggaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttatatttaa 26206724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 34459036 - 34458996
Alignment:
Q  183 ttaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  34459036 ttaattgaatgaacctaaaaaatcaaatttacttataatta 34458996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 39294247 - 39294183
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||| |  || ||||||| |||||||||||||||||||||||| ||||| ||||    
T  39294247 catattatggaccacatatatcattaattgaatgaacctaaaaagtcaaatttatttatatttaa 39294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 44639820 - 44639756
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| |||||| ||||    
T  44639820 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaa 44639756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 50519350 - 50519390
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  50519350 attaattgaatgaacctaaaaagtcaaatttgcttataatt 50519390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 55131588 - 55131532
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||||||||||||  |||||||||| ||| || ||||||    
T  55131588 attaattgaatgaacctaaaaagtcaaatttgtttataattaaaaacaaagggagta 55131532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 33084791 - 33084732
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| | ||| ||||||| ||||||||||| ||||||| ||||||||||    
T  33084791 catattatggaccacatacatcattaattgaatgaacctaacaagtcaattttacttata 33084732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 11583781 - 11583703
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| ||| | ||| ||||||| |||||| ||||||||| | ||||||||||| |||  |||||| ||||||    
T  11583781 catattatggaccacatacatcattaattgaatgaagctaaaaagtaatatttacttatatttagaaacgaaaggagta 11583703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 16391263 - 16391305
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||| ||| || ||||||||||||||||||||||||||||    
T  16391263 attaatttaataaatctaaaaagtcaaatttacttataattaa 16391305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 37431968 - 37432034
Alignment:
Q  172 cacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||| ||| |||| || |||||| |||||||||||| |||||||||||||||  ||||||| ||||    
T  37431968 cacgtacatcattagttgaatgaatctaaaaagtcaattttacttataattaattacgaatgaagta 37432034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 39754181 - 39754247
Alignment:
Q  176 tgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||| |||||||||||||||||||||| | |||||| |||||| |||| |||| |  |||||||||    
T  39754181 tgcatcattaattaaatgaacctaaaaaataaaatttgcttatatttaaaaacggaaagagtattat 39754247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 50533180 - 50533230
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    |||||||||||||||| ||||||||||||| || |||||| | ||||||||    
T  50533180 aatgaacctaaaaagtaaaatttacttatattttagaacggaaggagtatt 50533230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 14090741 - 14090778
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataac 114  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14090741 caatatctatttaggcccccaaaaaatacgaaaataac 14090778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 16450247 - 16450288
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||| ||||||| |||||||||||||||||| |||||||    
T  16450247 attaattgaatgaacataaaaagtcaaatttactaataatta 16450288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 23329422 - 23329385
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  23329422 attaattgaatgaacctaaaaagtaaaatttacttata 23329385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 24529625 - 24529588
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  24529625 attaattgaatgaacctaaaaagtcaattttacttata 24529588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 30162685 - 30162616
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||||||| ||| | ||| ||||||| ||||||| |||||||| |||||| |||||| || ||||||    
T  30162685 catattatggaccacatacatcattaattgaatgaacttaaaaagtaaaatttgcttatattttagaacg 30162616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 34595742 - 34595705
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  34595742 attaattgaatgaacctaaaaagtcaattttacttata 34595705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 37381139 - 37381196
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| || ||| ||||||||||||||||| |||||||||| |||| | |||||||    
T  37381139 attaattgaacgaatctaaaaagtcaaatttatttataattaataacggagggagtat 37381196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 38938097 - 38938056
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  38938097 cattattaattgaatgaatctaaaatgtcaaatttacttata 38938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 43965014 - 43964977
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  43965014 attaattgaatgaacctaaaaagtcaattttacttata 43964977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 2528714 - 2528674
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataaccttt 118  Q
    |||||||||||||| ||||||||||| |||||||| |||||    
T  2528714 aatatctctttaggtcccctaaaaattcgaaaatagccttt 2528674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 11643609 - 11643529
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||||| | ||| | ||||||||| | |||||| ||||||| | |||||||||||||||||  |||| |||| |||||    
T  11643609 catattatgaaccacatacattattaactgaatgaatctaaaaaatgaaatttacttataattagaaacggatggtgtatt 11643529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 15185913 - 15185953
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||||||||||||| |||||| |||||||||    
T  15185913 attaattgaatgaacctaaaaagtaaaatttgcttataatt 15185953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 24156219 - 24156135
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||||| |||| | ||| | ||| ||||| | ||||||||||||||||||| ||| |||||| |||| |||| | ||||||    
T  24156219 gtgatccataatatgaaccacatacatcattaaatgaatgaacctaaaaagtcaattttgcttatatttaaaaacggagggagta 24156135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 34459073 - 34459113
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  34459073 attaattgaatgaacctaaaaattcaaatttgcttataatt 34459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 34827527 - 34827468
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||| ||||||||||||| || ||||||||||||| |||  |||||| |||||||    
T  34827527 attattaattgaatgaacctaaaa-gtaaaatttacttatatttagaaacgaagggagtat 34827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 36886403 - 36886363
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  36886403 attaattaaataaacctaaaacgtcaattttacttataatt 36886363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 37306671 - 37306631
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  37306671 attattaattgaatgaacctaaaaagtaaaatttatttata 37306631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 42184723 - 42184783
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| |||||| ||||||| | ||||||| |||||||||| || ||| ||||||    
T  42184723 cattattaattgaatgaatctaaaaaattaaatttatttataattaacaatgaagggagta 42184783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 44495734 - 44495686
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||||||||||||||| |||||| |||| |||| | ||||||    
T  44495734 aatgaacctaaaaagtcaaatttgcttatatttaaaaacggagggagta 44495686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 37644404 - 37644472
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37644404 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 37644472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 21647599 - 21647666
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21647599 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 21647666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 29982150 - 29982218
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29982150 gaggattgctttttaggccctctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 29982218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 29982969 - 29982901
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29982969 gaggattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 29982901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 21648418 - 21648351
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  21648418 gaggattgctttttaggccccctcaatatctctttagaccccctaaaaatacaaaaataacctttata 21648351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 22424789 - 22424719
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  22424789 tggaagattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 22424719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 1389129 - 1389084
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1389129 caatatctctttaggccccctaaaaatacaaaaataacctttataa 1389084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 37645223 - 37645158
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataaccttta 119  Q
    ||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  37645223 gaggattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataaccttta 37645158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 5204966 - 5204887
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||||||| ||| | ||| |||||||||||||||||||||||| |||||| |||||| || |||||| | |||||||    
T  5204966 catattatggaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttatattttagaacggagggagtat 5204887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 15321830 - 15321879
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaat-acgaaaataacctttata 121  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  15321830 ccctcaatatctctttaggccccctaaaaataacaaaaataacctttata 15321879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 22424055 - 22424100
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22424055 caatatctctttaggccccttaaaaatacaaaaataacctttataa 22424100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 30202528 - 30202479
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  30202528 aatgaacctaaaaagtcaaatttgcttatatttaaaaacgaatggagtat 30202479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 37980670 - 37980715
Alignment:
Q  176 tgcattattaattaaatgaacctaaaaagtcaaatttacttataat 221  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  37980670 tgcatcattaattaaatgaacctaaaaagtcaattttacttataat 37980715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 38262044 - 38261995
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaa 231  Q
    ||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  38262044 attaattgaatgaacctaaaaagtcaaatttacttatattttagaacgaa 38261995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 5204989 - 5205045
Alignment:
Q  163 attatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||| ||| | ||| ||||||| ||||||||||||||||||||||||||||||    
T  5204989 attatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttacttata 5205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 15167881 - 15167822
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaat 111  Q
    ||||||||| |||| ||| | |||||||||||||||||||||||||||| |||| |||||    
T  15167881 tggaggattgctttttagaccccctcaatatctctttaggccccctaaagatacaaaaat 15167822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 35607484 - 35607430
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||||||| ||||||||||||||||||||||||||||||    
T  35607484 tatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttacttata 35607430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 42142029 - 42142087
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||||||||||||||||| ||  ||||||| || |||||    
T  42142029 attaattgaatgaacctaaaaagtcaaatttacttatattttggaacgaaaggtgtatt 42142087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 25668471 - 25668536
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||  | ||| | ||| |||||||||||||||||||||||| |||||| ||||||    
T  25668471 gtgatccatattataaaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttata 25668536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 29573902 - 29573959
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||| |||  |||||||||| |||| |||| |||||||||    
T  29573902 attaattaaatgaacctaaaaaatcacttttacttatatttaaaaacggatggagtat 29573959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 35607488 - 35607525
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  35607488 attaattgaatgaacctaaaaagtcaaatttacttata 35607525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 45123879 - 45123920
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  45123879 cattattaattgaatgaacctaaaaagtaaaatttacttata 45123920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 9665165 - 9665121
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaaga 226  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||    
T  9665165 attaattaaatgaacataaaaagttaaatttacttatatttaaga 9665121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 32070513 - 32070457
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||| ||||||||||||||| || |||||| | ||||||    
T  32070513 attaattgaatgaacctaaaaaatcaaatttacttatattttagaacggagggagta 32070457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 2795376 - 2795435
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  2795376 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 2795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 4101992 - 4101941
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  4101992 aatgaacctaaaaagtcaattttacttatatttaaaaacggagggagtatta 4101941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 40739580 - 40739627
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||| |||||||||||||| ||||||||||||||| || ||||||    
T  40739580 attaattgaatgaacctaaaaaatcaaatttacttatattttagaacg 40739627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 41823793 - 41823746
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  41823793 attaattaaatgaatttaaaaagacaaatatacttataattaagaacg 41823746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 5144339 - 5144393
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| |||||||||||||||||||||||| ||||||| |||||    
T  5144339 tatggaccacatacatcattaattaaatgaacctaaaaagtaaaatttatttata 5144393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 10237657 - 10237611
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||| | ||||||||||||||||||| |||||||||| ||||    
T  10237657 cattattaaatgaatgaacctaaaaagtcaattttacttatatttaa 10237611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 13477234 - 13477196
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataa 220  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  13477234 attaattaaatgaatctaaaaagtcaattttacttataa 13477196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 22444927 - 22444981
Alignment:
Q  185 aattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||| ||| |||||||    
T  22444927 aattgaatgaacctaaaaaatcaaatttatttataattacgaaggaagggagtat 22444981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 36490567 - 36490625
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||| |||||| |||||| |||  |||| ||||||||||    
T  36490567 attaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggatggagtatt 36490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 42579083 - 42579149
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| | ||| | ||| ||||||| |||||| ||||||||| ||||||||||||| ||||    
T  42579083 tccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaaaatttacttatatttaa 42579149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 3227534 - 3227575
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||| |||||||||||||||||  ||||||||||||||||    
T  3227534 attaatgaaatgaacctaaaaagttgaatttacttataatta 3227575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 14384761 - 14384692
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaag-tcaaatttacttataatt 222  Q
    |||||| |||||||||| ||| | ||||||||||| ||||||| ||| ||| | ||||||||||||||||    
T  14384761 gtgatctatattatggatcacatacattattaattcaatgaacataataagttaaaatttacttataatt 14384692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 19250180 - 19250249
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||| |||||| ||| | ||| ||||| ||||||||||||||||| ||| |||||||||| |||| ||||    
T  19250180 cataatatggatcacattcatcattaaataaatgaacctaaaaagccaattttacttatatttaaaaacg 19250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 20195365 - 20195304
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||||| ||||||||| |||||||||||||    
T  20195365 tccatattatgaatcacatacatcattaattgaatgaatctaaaaagtaaaatttacttata 20195304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 24971269 - 24971330
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||  || | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  24971269 tccatattatggactacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 24971330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 25217133 - 25217084
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataacctttataaaacgt 127  Q
    ||||||||||||| |||| |||||||| ||||||| ||||||||| ||||    
T  25217133 aatatctctttagaccccttaaaaatatgaaaatatcctttataatacgt 25217084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 27327909 - 27327852
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaattt 212  Q
    |||| ||||||||||| ||| | ||| ||||||| |||||||||||||||| ||||||    
T  27327909 tgattcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaattt 27327852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 29771778 - 29771843
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| | ||| | ||| ||||||| ||||||| |||||||| |||||| ||||||    
T  29771778 gtgatccatattatgaaccacatacatcattaattgaatgaacataaaaagtaaaatttgcttata 29771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 32070527 - 32070596
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||||||| ||| | ||| ||||||| ||||||||||||| || |||||| |||||| |||| ||||    
T  32070527 catattatggaccacatacatcattaattgaatgaacctaaaatgtaaaatttgcttatatttaaaaacg 32070596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 37980643 - 37980602
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||| |||||||||||||| |||| ||||||||||||||    
T  37980643 attaattgaatgaacctaaaaaatcaattttacttataatta 37980602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 40739566 - 40739497
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||||||| ||| |  || ||||||| |||||||||||||||| |||||| |||||| || ||||||    
T  40739566 catattatggaccacatatatcattaattgaatgaacctaaaaagtaaaatttgcttatattttagaacg 40739497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 921904 - 921944
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  921904 attaattgaatgaacttaaaaaatcaaatttacttataatt 921944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 4898217 - 4898157
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||||| |||||||||||||||| |||||| |||||| |||  |||| | ||||||||||    
T  4898217 attaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagtattat 4898157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 4945611 - 4945551
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||||| |||||||||||||||| |||||| |||||| |||  |||| | ||||||||||    
T  4945611 attaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagtattat 4945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 5717930 - 5717882
Alignment:
Q  176 tgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||||||||| ||| |||||| |||| |||||||||| ||||    
T  5717930 tgcattattaattaaataaacataaaaaatcaattttacttatatttaa 5717882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 8382883 - 8382923
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| |||||||||||||| | |||||||||||||    
T  8382883 attattaattgaatgaacctaaaaaataaaatttacttata 8382923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 13388985 - 13388941
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  13388985 cattattgattgaatgaacctaaaaaatcaaatttaattataatt 13388941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 15322677 - 15322641
Alignment:
Q  86 tttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  15322677 tttaggccccctaaaaatacaaaaatgacctttataa 15322641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 27327918 - 27327974
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||| |||||||| |||||| ||  ||||| ||||||||    
T  27327918 attaattgaatgaacctaaaaaatcaaatttgcttatattttggaacggatggagta 27327974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 27743677 - 27743761
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||  | ||| | ||| ||||||| |||||| ||||||||| ||||||| ||||| |||| || ||||| |||||    
T  27743677 tgatccatattataaaccacatacatcattaattgaatgaatctaaaaagtaaaatttatttatatttaaaaatgaatgaagtat 27743761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 33363623 - 33363707
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    ||||||||||| | ||| | ||| ||||| | ||||||||||||||||||| ||| |||||| ||||  ||| | ||||||||||    
T  33363623 tccatattatgaaccacatacatcattaaatgaatgaacctaaaaagtcaattttgcttatatttaaagacggagggagtattat 33363707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 36013576 - 36013536
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    |||||||||||||||||||||| || ||||| |||||||||    
T  36013576 attaattaaatgaacctaaaaaatctaattttcttataatt 36013536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 35814096 - 35814028
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35814096 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 35814028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 45880754 - 45880822
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45880754 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 45880822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 9088507 - 9088440
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9088507 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 9088440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 45881573 - 45881506
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45881573 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 45881506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 32517609 - 32517560
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32517609 ccctcaatatctctttaggccccctaaaaatacaaaaataacctttataa 32517560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 35813290 - 35813358
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35813290 tggaggattgctttttaggc-ccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 35813358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 9087688 - 9087752
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataaccttt 118  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  9087688 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataaccttt 9087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 31634480 - 31634539
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31634480 attaattgaattaacctaaaaagtcaaatttgcttataattaagaacgtatggagtatta 31634539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 250406 - 250361
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  250406 caatatctctttaggccccctaaaaatacaaaaataacctttataa 250361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 36180453 - 36180408
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36180453 caatatctctttaggccccctaaaaatacaaaaataacctttataa 36180408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 47708552 - 47708507
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  47708552 caatatctctttaggccccctaaaaatacaaaaataacctttataa 47708507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 32516809 - 32516876
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  32516809 gaggattgctttttaggccccctcaatatctctttaagtcccctaaaaatacaaaaataacctttata 32516876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 11626041 - 11625971
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  11626041 tggaagattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataatctttataa 11625971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 249704 - 249749
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  249704 caatatctctttagaccccctaaaaatacaaaaataacctttataa 249749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 11625307 - 11625352
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  11625307 caatatctctttaggccccctaaaaatacaaaaataacatttataa 11625352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 36179737 - 36179782
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  36179737 caatatctctttaggcctcctaaaaatacaaaaataacctttataa 36179782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 47991857 - 47991772
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||| |||||||||| ||| | ||| ||||| | ||||||||||||||||||||||| ||||||||| | |||| | |||||||    
T  47991857 gtgatctatattatggaccacatacatcattaaatgaatgaacctaaaaagtcaaatttgcttataattcataacggagggagtat 47991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 48636814 - 48636863
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  48636814 aatgaacctaaaaagtcaaattgacttataattaagaacggaaggagtat 48636863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 3160815 - 3160875
Alignment:
Q  159 ccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||| ||| ||||  ||||||| ||||||||||||||||||||||| ||||||    
T  3160815 ccatattatggaccacatgcaccattaattgaatgaacctaaaaagtcaaatttgcttata 3160875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 15013713 - 15013669
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  15013713 cattattaattgaatgaatctaaaaagtcaaatttacttataatt 15013669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 49753139 - 49753092
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  49753139 attaattaaatgaacctaaaaagtaaaatttacttatatttaaaaacg 49753092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 52880003 - 52880062
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||| |||||||||||||||||||||||||||||| ||| || || | |||||||||    
T  52880003 attaattgaatgaacctaaaaagtcaaatttacttatatttaggaccggagggagtatta 52880062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 21909915 - 21909833
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtattat 242  Q
    |||| |||||| ||| | ||| ||||||| ||| |||||||||||| ||||||||||||| | || |||| ||||||||||||    
T  21909915 cataatatggaccacatacatcattaattgaataaacctaaaaagtaaaatttacttatattcaaaaacggatggagtattat 21909833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 2091798 - 2091761
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  2091798 attaattgaatgaacctaaaaagtcaaatttacttata 2091761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 11343751 - 11343808
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| |||||||| |||||||||||||| |||||||||||| ||| | |||||||    
T  11343751 attaattgaatgaaccaaaaaagtcaaatttgcttataattaaggacggagggagtat 11343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 11501771 - 11501828
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| |||||||| |||||||||||||| |||||||||||| ||| | |||||||    
T  11501771 attaattgaatgaaccaaaaaagtcaaatttgcttataattaaggacggagggagtat 11501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 15055027 - 15054974
Alignment:
Q  188 taaatgaacctaaaaagtcaaatttacttataatta-agaacgaatggagtatt 240  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||| ||||||    
T  15055027 taaatgaacctaaaaagtcaattttacttataattagaaaacgaatgaagtatt 15054974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 26856037 - 26856098
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||| ||||||||||||||||||||| ||||||||||    
T  26856037 tccatattatgaaccacatacatcattaaataaatgaacctaaaaagtcaattttacttata 26856098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 48605150 - 48605085
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||| ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  48605150 gtgattcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 48605085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 34598950 - 34598990
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  34598950 attaattgaatgaatctaaaaagtcaaatttacttataatt 34598990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 1344432 - 1344515
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||||||| ||||||| ||| ||||| ||||| |||||||||||| || ||| |||||| || | |||| | |||||||||    
T  1344432 tccatattatgaaacacgtacatcattaaataaataaacctaaaaagtaaattttgcttatattttaaaacggagggagtatta 1344515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 21852489 - 21852430
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||||| ||||||||||||||||||| ||| |||||| |||| |||  |||||||||||    
T  21852489 attaattgaatgaacctaaaaagtcaattttgcttatatttaaaaaccgatggagtatta 21852430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 24023453 - 24023512
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    |||||||||||||||||||||||| || ||| |||||| |||| |||| | |||||||||    
T  24023453 attaattaaatgaacctaaaaagttaattttgcttatatttaaaaacggagggagtatta 24023512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 1358246 - 1358168
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||| |||||| ||| | ||| |||||||||||| || ||||||||||| |||||||||| |||| |||| | ||||||    
T  1358246 cataatatggaccacatacatcattaattaaatgtacttaaaaagtcaattttacttatatttaataacggagggagta 1358168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 12993622 - 12993676
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||||||| ||||||||||||||||||||||| ||||||    
T  12993622 tatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttgcttata 12993676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 47293246 - 47293196
Alignment:
Q  172 cacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||| ||| |||||||||||||| ||||||| | ||||||||||||||||    
T  47293246 cacgtacatcattaattaaatgaatctaaaaaattaaatttacttataatt 47293196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 48380635 - 48380681
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttataattaag 225  Q
    |||||||||| |||||||||||||| | |||| ||||||||||||||    
T  48380635 attattaattgaatgaacctaaaaaataaaatctacttataattaag 48380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 3160802 - 3160765
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  3160802 attaattgaatgaacctaaaaagtcaaatttgcttata 3160765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 23392627 - 23392672
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  23392627 taattaaatgaatctaaaaagtaaaatttgcttataattaaaaacg 23392672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 26660720 - 26660659
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  26660720 tccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 26660659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 27549109 - 27549170
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  27549109 tccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 27549170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 28237124 - 28237083
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  28237124 attaataaaatgaatctaaaaagtcaaatttatttataatta 28237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 34038008 - 34038045
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  34038008 attaattgaatgaacctaaaaagtcaattttacttata 34038045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 40907259 - 40907194
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| |||| | ||| | ||| ||||||||||||||| ||||||||||| ||| ||||||    
T  40907259 gtgatccataatatgaaccacatacatcattaattaaatgaacgtaaaaagtcaatttttcttata 40907194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 48376858 - 48376817
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  48376858 cattattaattaaataaatttaaaaagtcaaatttacttata 48376817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 48605158 - 48605195
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  48605158 attaattgaatgaacctaaaaagtcaaatttgcttata 48605195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 1252214 - 1252142
Alignment:
Q  151 tacgtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||| |||||| |||| | ||| | ||| ||||||| |||||||||||||||| || ||| ||||||||||    
T  1252214 tacgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaagttaattttgcttataatta 1252142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 15401868 - 15401944
Alignment:
Q  164 ttatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| ||| | ||||||||| |||||||||||||||| | || ||| |||||| |||| |||| || |||||||    
T  15401868 ttatggaccacatacattattaaataaatgaacctaaaaaattaattttgcttatatttaaaaacggattgagtatt 15401944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 28237138 - 28237201
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||| | |||||| |||||||||||    
T  28237138 catattatggaccacatacatcattaattgaatgaacctaaaaa-ttaaatttgcttataattaa 28237201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 39015615 - 39015575
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  39015615 attaattgaatgaacctaaaaagtcaaatttgtttataatt 39015575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 42308939 - 42308899
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctt 117  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  42308939 caatatctttttaggcctcctaaaaatacaaaaataacctt 42308899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 47418200 - 47418160
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||||| ||||||| |||| ||||||||||    
T  47418200 attattaattaaatgaatctaaaaaatcaattttacttata 47418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 48376890 - 48376930
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  48376890 attattaattgaatgaatctaaaaagtcaaatttgcttata 48376930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 50998356 - 50998316
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  50998356 attaattgaatgaacctaaaaaatcaaatttgcttataatt 50998316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 39774383 - 39774316
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39774383 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 39774316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 39773563 - 39773632
Alignment:
Q  53 ggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||| |||| ||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39773563 ggaggattgctttttaggccccctcaatatctctttaggccccctaaaaattcaaaaataacctttataa 39773632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 41178031 - 41177954
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||||| ||| | ||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  41178031 atattatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttacttatatttaagaacggatgaagta 41177954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 5157297 - 5157229
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  5157297 gaggattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 5157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 5158041 - 5157973
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  5158041 gaggattgctttttaggccccctcaatatctctttaggcctcctaaaaatacaaaaataacctttataa 5157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 44445964 - 44446034
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44445964 tggaagattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 44446034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 44446689 - 44446643
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataaa 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  44446689 caatatctctttaggccccctaaaaatacaaaaataacctttataaa 44446643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 5156573 - 5156618
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  5156573 caatatctctttaggccccctaaaaatacaaaaataacctttataa 5156618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 28824146 - 28824191
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28824146 caatatctctttaggccccctaaaaatacaaaaataacctttataa 28824191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 28824847 - 28824802
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  28824847 caatatctctttaggccccctaaaaatacaaaaataacctttataa 28824802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 29555529 - 29555574
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29555529 caatatctctttaggccccctaaaaatacaaaaataacctttataa 29555574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 29556237 - 29556192
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29556237 caatatctctttaggccccctaaaaatacaaaaataacctttataa 29556192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 38376228 - 38376273
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  38376228 caatatctctttaggccccctaaaaatacaaaaataacctttataa 38376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 39655481 - 39655561
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||||| ||| | ||| ||||||| ||||||| ||||||||||||||| |||||| || |||||||| ||||||    
T  39655481 tccatattatggaccacatacatcattaattgaatgaacataaaaagtcaaatttgcttatattttagaacgaagggagta 39655561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3270634 - 3270568
Alignment:
Q  172 cacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||| ||| ||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||    
T  3270634 cacgtacatcattaaataaatgaacctaaaaagtcaattttacttatatttaaaaacgaagggagta 3270568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 34188384 - 34188462
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| ||||||| ||||| ||||||||| | ||||||    
T  34188384 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttatttatatttaagaacggagggagta 34188462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 43483998 - 43484078
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| |||||| |||| |||| | ||||||||    
T  43483998 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagtatt 43484078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 39655493 - 39655410
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    |||||| |||||| ||| | ||| ||||||| ||||||||||||||||||||||| |||||| ||  ||||| | |||||||||    
T  39655493 tccataatatggaccacatacatcattaattgaatgaacctaaaaagtcaaatttgcttatattttggaacggagggagtatta 39655410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 1647100 - 1647165
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| | ||| | ||| ||||| | ||||||||||||||||||| ||||||||||    
T  1647100 gtgatccatattatgaatcacatacatcattaaatgaatgaacctaaaaagtcaattttacttata 1647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 10150921 - 10150884
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  10150921 attaattgaatgaacctaaaaagtcaaatttacttata 10150884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 14858004 - 14857947
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaat 111  Q
    ||||||| |||| ||| | |||||||||||||||||||||||||||| |||| |||||    
T  14858004 gaggattgctttttaggccccctcaatatctctttaggccccctaaagatacaaaaat 14857947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 35969746 - 35969787
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| |||||||||||||||| |||||||||||||    
T  35969746 cattattaattgaatgaacctaaaaagtaaaatttacttata 35969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 1875763 - 1875703
Alignment:
Q  159 ccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||| || ||| | ||| ||||||| ||||||||||||||||||||||| ||||||    
T  1875763 ccatattatagaccacatacatcattaattgaatgaacctaaaaagtcaaatttgcttata 1875703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 5040142 - 5040078
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    |||| |||||| ||| | ||| ||||||| |||||| |||||| |||||||||||||||||||||    
T  5040142 cataatatggaccacatacatcattaattgaatgaatctaaaatgtcaaatttacttataattaa 5040078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 2552869 - 2552924
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataa 220  Q
    |||||| ||| | ||| ||||||| ||||||||||||||||||| |||||||||||    
T  2552869 tatggaccacatacatcattaattgaatgaacctaaaaagtcaactttacttataa 2552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 4274675 - 4274714
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  4274675 aatgaacctaaaaagtcaaatttacttatattttagaacg 4274714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 10150937 - 10150972
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||| ||||||||||||||||||||||||||||||    
T  10150937 taattgaatgaacctaaaaagtcaaatttacttata 10150972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 37922886 - 37922827
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  37922886 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 37922827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 44838848 - 44838769
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||||||| ||| | ||| ||||||| ||| || |||||||||||| ||| |||||| |||| |||| |||||||||    
T  44838848 catattatggaccacatacatcattaattgaataaatctaaaaagtcaattttgcttatatttaaaaacggatggagtat 44838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 4274660 - 4274606
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||    
T  4274660 tatggaccacatacatcattgattgaatgaacctaaaaagtcaaatttacttata 4274606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 42835730 - 42835684
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaac 228  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||||||    
T  42835730 attaattaaatgaacctaaaaagtaaaatttctttatatttaagaac 42835684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 11302027 - 11302068
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||||||||||||||||| || ||| ||||||    
T  11302027 cattattaattaaatgaacctaaaaagttaattttgcttata 11302068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 11302974 - 11303015
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||||||||||||||||||||| || ||| ||||||    
T  11302974 cattattaattaaatgaacctaaaaagttaattttgcttata 11303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 29730751 - 29730812
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||||| ||| ||||| ||||||||  ||||||||||||||| ||||||    
T  29730751 tccatattatgaaccacgtacatcattaactaaatgaaaataaaaagtcaaatttgcttata 29730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 32241822 - 32241753
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||| || ||| | ||| ||||||| |||||||||||||||| ||||||  ||||| |||||||||    
T  32241822 catattatagaccacatacataattaattgaatgaacctaaaaagtaaaatttgtttatatttaagaacg 32241753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 34188370 - 34188333
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  34188370 attaattgaatgaacctaaaaagtcaaatttatttata 34188333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 35063548 - 35063585
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  35063548 attaattaaatgaacctaaaaagtcaattttgcttata 35063585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 38376936 - 38376892
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  38376936 caatatctctttaggccccct-aaaatacaaaaataatctttataa 38376892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 38884034 - 38884091
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| |||||||||||||||| |||||| |||||| ||   ||||||||||||||    
T  38884034 attaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacgaatggagtat 38884091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 2552846 - 2552798
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||||||||||| |||||| ||||||||||  |||||| ||||||    
T  2552846 aatgaacctaaaaagtaaaatttgcttataattagaaacgaagggagta 2552798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 5918259 - 5918299
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||| ||||||||||||||||| ||||||||    
T  5918259 attaatttaatgaagctaaaaagtcaaatttatttataatt 5918299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 30805086 - 30805042
Alignment:
Q  180 ttattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||  ||| ||| |||||||||||||||||||||||||||    
T  30805086 ttattaatcgaataaacttaaaaagtcaaatttacttataattaa 30805042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 32241836 - 32241872
Alignment:
Q  183 ttaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  32241836 ttaattaaatgaacctaaaaagttaaatttgcttata 32241872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 44282317 - 44282277
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  44282317 attaattgaatgaacctaaagagtcaaatttgcttataatt 44282277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 3341584 - 3341651
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3341584 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 3341651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 3358493 - 3358560
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3358493 gaggattgctttttaggccccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 3358560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 3342403 - 3342336
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  3342403 gaggattgctttttaggccccctcaatatctctttagaccccctaaaaatacaaaaataacctttata 3342336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 3359312 - 3359245
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||| |||| ||| | |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  3359312 gaggattgctttttaggccccctcaatatctctttagaccccctaaaaatacaaaaataacctttata 3359245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 2600853 - 2600898
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2600853 caatatctctttaggccccctaaaaatacaaaaataacctttataa 2600898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 4276294 - 4276249
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  4276294 caatatctctttaggccccctaaaaatacaaaaataacctttataa 4276249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 31230160 - 31230115
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  31230160 caatatctctttaggccccctaaaaatacaaaaataacctttataa 31230115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 4275587 - 4275631
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4275587 aatatctctttaggccccctaaaaatacaaaaataacctttataa 4275631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 23117542 - 23117484
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  23117542 attaaataaatgaacctaaaaagtcaattttacttatatttaaaaacggatggagtatt 23117484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 2601562 - 2601517
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  2601562 caatatctctttaggcctcctaaaaatacaaaaataacctttataa 2601517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 14064890 - 14064805
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||| |||| |||||| ||| | ||| ||||||| |||||||||||||||| ||||||||||||| |||| |||| | |||||||    
T  14064890 gtgattcataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagtat 14064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 31229451 - 31229496
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31229451 caatatctctttaggccccctaaaagtacaaaaataacctttataa 31229496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 13420507 - 13420449
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| ||| | ||||||||||| |||||||||||||| |||| ||||||||||    
T  13420507 atattatggatcacatacattattaattgaatgaacctaaaaaatcaattttacttata 13420449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 25257156 - 25257198
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttataat 221  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  25257156 attattaattgaatgaatctaaaaagtcaaatttacttataat 25257198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 25320946 - 25320988
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttataat 221  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  25320946 attattaattgaatgaatctaaaaagtcaaatttacttataat 25320988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4151207 - 4151146
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||| |||| |||| |||||||||    
T  4151207 cattattaattgaatgaacttaaaaagtcaattttgcttatatttaaaaacggatggagtat 4151146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 9984992 - 9985065
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||| ||| ||||| |||| || |||||| ||||||| |||||||||||||||||||  |||| ||||||||    
T  9984992 tatggaccacatgcatcattagttgaatgaatctaaaaaatcaaatttacttataattagaaacggatggagta 9985065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 13420522 - 13420579
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||| |||||||| |||||| |||| |||| | |||||||    
T  13420522 attaattaaatgaacctaaaaaatcaaatttgcttatatttaaaaacggagggagtat 13420579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 34148028 - 34148085
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||||||||||||||||| | ||||||||||||| || | |||| |||||||||    
T  34148028 attaattaaatgaacctaaaaaataaaatttacttatattttaaaacggatggagtat 34148085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 36441145 - 36441088
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||| ||||||||||||||||||| ||||||||||||| || | |||||| |||||||    
T  36441145 attatttaaatgaacctaaaaagtaaaatttacttatattttaaaacgaaaggagtat 36441088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 39916348 - 39916429
Alignment:
Q  157 atccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||||||||||  | ||| | ||||||||||| |||||||||||||||| |||||| |||||| |||  |||| ||||||||    
T  39916348 atccatattataaaccacatacattattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggatggagta 39916429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 15966710 - 15966778
Alignment:
Q  161 atattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||| ||| | ||| ||||||| ||||||||||||||||||| |||| ||||| |||| ||||    
T  15966710 atattatggaccacatacatcattaattgaatgaacctaaaaagtcaattttatttatatttaaaaacg 15966778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 27990445 - 27990501
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||||| |||||| ||||||||||  |||| ||||||||    
T  27990445 attaattgaatgaacctaaaaagtgaaatttgcttataattagcaacggatggagta 27990501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33998272 - 33998232
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  33998272 attaattaaatgaacataaaaagtcaaattttcttataatt 33998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 43585561 - 43585641
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||||| | ||| | ||| ||||||| |||||||||||||||| || ||| |||||| |||| |||| ||||||||||    
T  43585561 catattatgaaccacatacatcattaattgaatgaacctaaaaagtaaattttgcttatatttaaaaacggatggagtatt 43585641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 1723295 - 1723248
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||||||||||||| |||||||| |||||| || ||||||    
T  1723295 attaattaaatgaacctaaaaaatcaaatttgcttatattttagaacg 1723248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 9984973 - 9984926
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||||||||||||| | |||||| ||||||||||| ||||    
T  9984973 attaattaaatgaacctaaaaaataaaatttgcttataattaaaaacg 9984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 16018568 - 16018521
Alignment:
Q  177 gcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    |||| ||||| ||||||||||||||||||||| |||||||||| ||||    
T  16018568 gcatcattaaataaatgaacctaaaaagtcaattttacttatatttaa 16018521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 32067978 - 32068041
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||||||| ||||| ||| ||||||| ||||||  |||||||| |||||| ||||||||||    
T  32067978 catattatggaccacgttcatcattaattgaatgaatttaaaaagttaaatttgcttataatta 32068041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 40905924 - 40905975
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagt 205  Q
    ||||||||||||||||| ||| | ||| ||||| ||||||||||||||||||    
T  40905924 gtgatccatattatggatcacatacatcattaaataaatgaacctaaaaagt 40905975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 1723331 - 1723385
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggag 236  Q
    ||||||| |||||||||||||||| |||||| |||||| |||| |||||| ||||    
T  1723331 attaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacgaagggag 1723385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 6638283 - 6638225
Alignment:
Q  181 tattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    |||||||| |||||||||||||||| |||||| |||||| |||| |||| | |||||||    
T  6638283 tattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagtat 6638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 21163601 - 21163655
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| | ||| ||||||| |||||||||||||||| |||||||||||||    
T  21163601 tatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttata 21163655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 22584320 - 22584378
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||| |||||||||||||||| |||||| |||||| |||| |||  ||||||||||    
T  22584320 attaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacagatggagtatt 22584378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 31787298 - 31787240
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaattt 212  Q
    ||||||||||||||| | ||| | ||| ||||||| |||||||||||||||| ||||||    
T  31787298 gtgatccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaattt 31787240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 34186421 - 34186499
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||| |||| ||| |||||| |||| |||| | ||||||    
T  34186421 catattatggaccacatacatcattaattgaatgaacctaaaaactcaattttgcttatatttaaaaacggagggagta 34186499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 9247038 - 9246977
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||||||| || ||| | ||| ||||||| ||||||| |||||||| |||||||||||||    
T  9247038 tccatattattgaccacatacatcattaattgaatgaacataaaaagtaaaatttacttata 9246977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 15966008 - 15965971
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  15966008 attaattgaatgaacctaaaaagtaaaatttacttata 15965971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 16056806 - 16056891
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    |||||||||||||| | ||| | ||| ||||| | |||||||||||||| | || ||| |||||| |||  |||||||||||||||    
T  16056806 tgatccatattatgaaccacatacatcattaaatgaatgaacctaaaaaattaattttgcttatatttagaaacgaatggagtatt 16056891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21152640 - 21152603
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  21152640 attaattgaatgaacctaaaaagtaaaatttacttata 21152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21159775 - 21159738
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  21159775 attaattgaatgaacctaaaaagtaaaatttacttata 21159738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21163582 - 21163545
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  21163582 attaattgaatgaacctaaaaagtaaaatttacttata 21163545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 24433599 - 24433660
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||||||||||||| | |||||||||||||    
T  24433599 tccatattatgaaccacatacatcattaattgaatgaacctaaaaaataaaatttacttata 24433660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 25596496 - 25596549
Alignment:
Q  176 tgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||| ||||||  |||||| ||||||||| |||||| ||||||||||||||||    
T  25596496 tgcatcattaatagaatgaatctaaaaagttaaatttgcttataattaagaacg 25596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 27304801 - 27304862
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| | ||| | ||| ||||||| |||||||||||||| | |||||||||||||    
T  27304801 tccatattatgaaccacatacatcattaattgaatgaacctaaaaattaaaatttacttata 27304862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 29112336 - 29112279
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtat 239  Q
    ||||||| |||||||||||||| | |||||| ||||||||||| |||| | |||||||    
T  29112336 attaattgaatgaacctaaaaaataaaatttgcttataattaaaaacggagggagtat 29112279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 31947529 - 31947468
Alignment:
Q  155 tgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttactt 216  Q
    ||||||||| |||| | ||| | ||| ||||||| |||||| ||||||||||||||||||||    
T  31947529 tgatccataatatgaaccacatacataattaattgaatgaatctaaaaagtcaaatttactt 31947468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 36346841 - 36346804
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  36346841 attaattgaatgaacctaaaaagtaaaatttacttata 36346804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 36964282 - 36964245
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  36964282 attaattgaatgaacctaaaaagtcaattttacttata 36964245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 43340500 - 43340557
Alignment:
Q  179 attattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggag 236  Q
    |||||||||| |||||||||||||||| |||||| |||||| || | |||| ||||||    
T  43340500 attattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggatggag 43340557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 5233785 - 5233825
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctt 117  Q
    |||||||| ||||||||| |||||||||| |||||||||||    
T  5233785 caatatctttttaggccctctaaaaatacaaaaataacctt 5233825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 9087594 - 9087650
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||| ||||||||||||||||||||| ||| |||||| |||| |||| | ||||||    
T  9087594 attaaataaatgaacctaaaaagtcaattttgcttatatttaaaaacggaaggagta 9087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 10832445 - 10832481
Alignment:
Q  183 ttaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| |||||||||||||||| |||||||||||||    
T  10832445 ttaattgaatgaacctaaaaagtaaaatttacttata 10832481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 12165336 - 12165288
Alignment:
Q  182 attaattaaatgaacctaaaaagtc-aaatttacttataattaagaacg 229  Q
    |||||||||||||| |||||||||| |||||| ||||||||||| ||||    
T  12165336 attaattaaatgaatctaaaaagtcaaaatttgcttataattaacaacg 12165288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 21916996 - 21916932
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||| ||| | ||| ||||||| ||| |||||||||| |||| ||||||||||||||| ||||    
T  21916996 tatggatcacatacataattaattgaataaacctaaaaaatcaattttacttataattaataacg 21916932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 29112363 - 29112419
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||||||||||||| |||||| | |||| |||| |||||| ||||||    
T  29112363 attaattgaatgaacctaaaaagtaaaatttgcatatatttaaaaacgaagggagta 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 32146896 - 32146832
Alignment:
Q  165 tatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||| ||||| ||| ||||| |||||||||||||||||| || ||| |||||| |||| ||||    
T  32146896 tatggaccacgtacatcattaaataaatgaacctaaaaagtaaattttgcttatatttaaaaacg 32146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 18108 - 18060
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaatacgaaaataacctttata 121  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18108 ccctcaatatctctttaggccccctaaaaatacaaaaataacctttata 18060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 17308 - 17376
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | |||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  17308 gaggattgctttttaggccccctcaatatttctttaggccccctaaaaatataaaaataacctttataa 17376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 26275427 - 26275495
Alignment:
Q  54 gaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||| |||| ||| | |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  26275427 gaggattgctttttaggccccctcaatatctctttaggccctctaaaaatacaaaaataacctttataa 26275495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 305715 - 305645
Alignment:
Q  52 tggaggattactttatagccaccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  305715 tggaagattgctttttaggcccccccaatatctctttaggccccctaaaaatacaaaaataacctttataa 305645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 304995 - 305040
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  304995 caatatctctttaggccccctaaaaatacaaaaataacctttataa 305040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 644122 - 644167
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  644122 caatatctctttaggccccctaaaaatacaaaaataacctttataa 644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 644823 - 644778
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  644823 caatatctctttaggccccctaaaaatacaaaaataacctttataa 644778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 19803396 - 19803445
Alignment:
Q  73 ccctcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  19803396 ccctcaatatctctttaggccccctgaaaatacaaaaataacctttataa 19803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 33775590 - 33775635
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33775590 caatatctctttaggccccctaaaaatacaaaaataacctttataa 33775635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 33776291 - 33776246
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  33776291 caatatctctttaggccccctaaaaatacaaaaataacctttataa 33776246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 26498659 - 26498730
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaa 231  Q
    |||||||| || ||| | ||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  26498659 catattatagaccacatacatcattaattaaacgaacctaaaaagtcaaatttgcttataattgagaacgaa 26498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 23950094 - 23950049
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  23950094 caatatctctttaggccccctaaaaatacaaaattaacctttataa 23950049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 26276222 - 26276177
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  26276222 caatatctctttaggtcccctaaaaatacaaaaataacctttataa 26276177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 15467623 - 15467584
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  15467623 taattaaatgaatctaaaaagtcaaatttacttataatta 15467584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 2693738 - 2693672
Alignment:
Q  158 tccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaa 224  Q
    ||||||||||| | ||| | ||| ||||| ||||||||||||||||||||| |||||||||| ||||    
T  2693738 tccatattatgaaccacatacatcattaaataaatgaacctaaaaagtcaattttacttatatttaa 2693672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 7756548 - 7756503
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||    
T  7756548 cattattaattgaattaacctaaaaagtgaaatttacttataatta 7756503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 9908224 - 9908261
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  9908224 attaattgaatgaacctaaaaagtcaaatttacttata 9908261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 22509775 - 22509820
Alignment:
Q  77 caatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||    
T  22509775 caatatctctttagaccccctaaaaatacaaaaataacgtttataa 22509820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 5433419 - 5433475
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||| |||| | ||||||    
T  5433419 attaattgaatgaacataaaaagtcaaatttgcttataattaaaaacggagggagta 5433475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 3418840 - 3418891
Alignment:
Q  178 cattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    ||||||||||| ||||||||||||||||||| ||| |||||| |||| ||||    
T  3418840 cattattaattgaatgaacctaaaaagtcaattttgcttatatttaaaaacg 3418891  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 9908216 - 9908129
Alignment:
Q  154 gtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatta 241  Q
    ||||| ||||||||||| ||| | ||| ||| ||| |||||||||||||||| |||||| |||||| ||  ||||| | |||||||||    
T  9908216 gtgattcatattatggaccacatacatcattgattgaatgaacctaaaaagtaaaatttgcttatattttggaacggagggagtatta 9908129  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 32786182 - 32786241
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||| ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  32786182 catattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 32786241  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 3343867 - 3343921
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||| ||||||||||||||||||| |||||||||| |||  |||| ||||||||    
T  3343867 taattgaatgaacctaaaaagtcaattttacttatatttagaaacggatggagta 3343921  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 7498475 - 7498425
Alignment:
Q  190 aatgaacctaaaaagtcaaatttacttataattaagaacgaatggagtatt 240  Q
    ||||||||||||||||||| |||||||||| |||| |||| | ||||||||    
T  7498475 aatgaacctaaaaagtcaattttacttatatttaaaaacggagggagtatt 7498425  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 13902097 - 13902019
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    |||| |||||| ||| | ||| ||||| | ||||||||||||||||||| ||| |||||| |||| |||| ||||||||    
T  13902097 cataatatggaccacatacatcattaaattaatgaacctaaaaagtcaattttgcttatatttaaaaacggatggagta 13902019  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 29938424 - 29938346
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| ||| | ||| ||||| | |||||| |||||||||||| ||| |||||| |||| |||||| ||||||    
T  29938424 catattatggaccacatacatcattaaatgaatgaatctaaaaagtcaattttgcttatatttaaaaacgaagggagta 29938346  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 31759390 - 31759468
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||||||| ||| | ||| ||||||| ||||||| ||||||||||| ||| |||||| |||  |||| ||||||||    
T  31759390 catattatggaccacatacatcattaattgaatgaacttaaaaagtcaattttgcttatatttagaaacggatggagta 31759468  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 3418808 - 3418771
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  3418808 attaattgaatgaacctaaaaagtcaattttacttata 3418771  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 19693835 - 19693884
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataacctttataaaacgt 127  Q
    |||||||||||||||| || ||||||||||||| || |||||||| ||||    
T  19693835 aatatctctttaggccaccaaaaaatacgaaaacaatctttataagacgt 19693884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 32161616 - 32161579
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  32161616 attaattgaatgaacctaaaaaatcaaatttacttata 32161579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 13853127 - 13853055
Alignment:
Q  151 tacgtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataatta 223  Q
    ||||||||  ||||| |||| ||| | ||| ||||||| ||||||| ||||||||||| ||| ||||||||||    
T  13853127 tacgtgatttatattgtggatcacatacatcattaattgaatgaacttaaaaagtcaatttttcttataatta 13853055  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 26643 - 26704
Alignment:
Q  160 catattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttataat 221  Q
    ||||||||||| ||| |  |||||||||| ||||||||||||||||||||||| ||||||||    
T  26643 catattatggaccacatagattattaattgaatgaacctaaaaagtcaaatttgcttataat 26704  T

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Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 63526 - 63566
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  63526 attaattaaatgaacctaaaaagtcaaatttgcttataatt 63566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 63490 - 63450
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  63490 attaattgaatgaacgtaaaaagtcaaatttacttataatt 63450  T

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Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 4772 - 4821
Alignment:
Q  78 aatatctctttaggccccctaaaaatacgaaaataacctttataaaacgt 127  Q
    |||||||||||||||| | | |||||||||||||||||||||||| ||||    
T  4772 aatatctctttaggcctctttaaaatacgaaaataacctttataagacgt 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 5190 - 5144
Alignment:
Q  76 tcaatatctctttaggccccctaaaaatacgaaaataacctttataa 122  Q
    |||||||||||||||| ||| |||||||| ||||||| |||||||||    
T  5190 tcaatatctctttaggacccataaaaataggaaaatatcctttataa 5144  T

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Target: scaffold0531 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 7058 - 7002
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataattaagaacgaatggagta 238  Q
    ||||||| |||||| |||||||||||||||| ||||||||||  |||| ||||||||    
T  7058 attaattgaatgaatctaaaaagtcaaatttgcttataattagtaacggatggagta 7002  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 58388 - 58428
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttataatt 222  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  58388 attaattgaatgaacctaaaaagtcaaatttgcttataatt 58428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 560 - 515
Alignment:
Q  184 taattaaatgaacctaaaaagtcaaatttacttataattaagaacg 229  Q
    |||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  560 taattaaatgaatctaaaaagtaaaatttgcttataattaaaaacg 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 42692 - 42655
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  42692 attaattgaatgaacctaaaaagtaaaatttacttata 42655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 45573 - 45536
Alignment:
Q  182 attaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  45573 attaattaaatgaacttaaaaagtaaaatttacttata 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 232 - 304
Alignment:
Q  147 tacatacgtgatccatattatggaacacgtgcattattaattaaatgaacctaaaaagtcaaatttacttata 219  Q
    |||||| ||| ||||||||||  | ||| | ||| ||||||| |||||||||||||||| |||||| ||||||    
T  232 tacatatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttata 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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