View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2005_high_5 (Length: 249)
Name: NF2005_high_5
Description: NF2005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2005_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 16 - 249
Target Start/End: Complemental strand, 44802336 - 44802106
Alignment:
| Q |
16 |
attaaaggagatatcagtatcagaatcaagatctactacacagttatgtaacttatgcttaatttgtttatctagttaaagagcaattactccaagacat |
115 |
Q |
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| T |
44802336 |
attaaaggagatatcagtatcagaatgaagatctactacacagttatgtaacttatgcttaatttgtttatcatgttaaagagcaattactccaagacat |
44802237 |
T |
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| Q |
116 |
tgagtattcgagtgctctcacttctcacgtataatttctcaaagtttaatttcattaattaattaatgtagcgaactttagcatttccagtcttagtatt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44802236 |
tgagtattcgagtgctctcacttctcacgtataatttctcaaagtttaatttcattaattaatgt---tagcgaactttagcatttccagtcttagtatt |
44802140 |
T |
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| Q |
216 |
gacgagttactggaatataatgggatcataaatt |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44802139 |
gacgagttactggaatataatgggatcataaatt |
44802106 |
T |
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