View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20061_high_11 (Length: 368)

Name: NF20061_high_11
Description: NF20061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20061_high_11
NF20061_high_11
[»] chr6 (7 HSPs)
chr6 (1-365)||(13609351-13609715)
chr6 (3-94)||(33389569-33389660)
chr6 (3-76)||(31561319-31561392)
chr6 (3-75)||(9168268-9168340)
chr6 (214-282)||(31561110-31561178)
chr6 (11-79)||(33059068-33059136)
chr6 (3-79)||(33411450-33411526)
[»] chr4 (16 HSPs)
chr4 (9-365)||(31245300-31245656)
chr4 (3-79)||(31019291-31019367)
chr4 (11-156)||(31527908-31528053)
chr4 (3-79)||(31029172-31029248)
chr4 (9-79)||(31477478-31477548)
chr4 (3-76)||(31158740-31158813)
chr4 (214-339)||(31158951-31159076)
chr4 (214-339)||(31489919-31490044)
chr4 (3-99)||(31033508-31033603)
chr4 (207-342)||(31019495-31019630)
chr4 (207-342)||(31029376-31029511)
chr4 (8-75)||(31502606-31502671)
chr4 (3-94)||(31149839-31149930)
chr4 (309-339)||(31477218-31477248)
chr4 (309-339)||(31502340-31502370)
chr4 (315-351)||(31033784-31033820)
[»] chr7 (1 HSPs)
chr7 (90-365)||(14724579-14724851)
[»] chr5 (1 HSPs)
chr5 (90-343)||(17598911-17599168)
[»] scaffold0428 (1 HSPs)
scaffold0428 (9-79)||(8263-8333)
[»] chr2 (1 HSPs)
chr2 (3-79)||(17439335-17439411)


Alignment Details
Target: chr6 (Bit Score: 357; Significance: 0; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 13609715 - 13609351
Alignment:
Q  1 ttaatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609715 ttaatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttag 13609616  T
Q  101 tacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609615 tacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgt 13609516  T
Q  201 acttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609515 acttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgt 13609416  T
Q  301 ccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13609415 ccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttatttgacat 13609351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 33389569 - 33389660
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcata 94  Q
    ||||| |||||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||| ||||||||||||||  |||| ||||||    
T  33389569 aatctagccaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgctagtggaagaccattagcata 33389660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 31561392 - 31561319
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctag 76  Q
    ||||||| |||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||  |||||||||    
T  31561392 aatctggacaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactgtaattgctag 31561319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 9168268 - 9168340
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgcta 75  Q
    ||||| |||||||||||  | |||||||  ||||  |||||| |||||||||||||||| |||| ||||||||    
T  9168268 aatctagccaatgcactcttgcattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgcta 9168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 31561178 - 31561110
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaaccta 282  Q
    |||| ||||||| |||| |||| |||||  ||||||||||||| |  |||||||||||||||| |||||    
T  31561178 catccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcaccta 31561110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 33059068 - 33059136
Alignment:
Q  11 caatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    |||||||||  |||||||||  ||||  |||||| ||||||| |||||||| |||| ||||||||||||    
T  33059068 caatgcactcttccattcagtcacattacgaccaaacaaaaacgagcccaatactttaattgctagtgg 33059136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 33411450 - 33411526
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||  |||||||||  |||    ||||| |||||||||||||||| |||| ||||||||||||    
T  33411450 aatctagccaatgcactcttccattcagccacactatgaccaaacaaaaatgagcccaatactttaattgctagtgg 33411526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 9 - 365
Target Start/End: Complemental strand, 31245656 - 31245300
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttagtacatcat 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||  |||||| ||||| ||||||    
T  31245656 gccaatgcacttctccattcagagacatctcggccatacaaaaatgagcccaaaactttaattgctaatggaaggccattggcatatgttagtgcatcat 31245557  T
Q  109 atgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgtacttcata 208  Q
     |||||||| |   ||||| |||| |||||||||||| |||||||| ||||||||||||||| ||||||||| |||| |||| ||   ||| ||||  ||    
T  31245556 ctgtcaagtatatgtaaccgctcatgatatcatcactcttgaaagccttcctacaaaacaattgaagggcattattatgatccaagagtcgaactttgta 31245457  T
Q  209 aatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagttta 308  Q
     | ||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||| ||||||||||| ||  ||| ||||    
T  31245456 cacttcatctactccatgctctctcaagatatgaacatctctagaaattatgatgattctactccctgtgcctagccattctcgtgtcatagccaattta 31245357  T
Q  309 tccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| || |||||    
T  31245356 tccagttgttcaacttgatcaacattatcaagaactataagggattttatttgacat 31245300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31019291 - 31019367
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||| ||||||||||||    
T  31019291 aatctagccaatgcacttctccattcggagatatctcgaccaaacaaaaatgagcccaatactttaattgctagtgg 31019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 31527908 - 31528053
Alignment:
Q  11 caatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttagtacatcatat 110  Q
    ||||||||||||||||||| | | |||||||||| ||||||||||||||||  ||| ||| |||||||| | ||||| |||||| |||||||  ||||||    
T  31527908 caatgcacttctccattcataaatatctcgaccaaacaaaaatgagcccaatgctttaatcgctagtggtaagccattagcataatttagtatctcatat 31528007  T
Q  111 gtcaagtctgcataaccactcaagatatcatcacttttgaaagctt 156  Q
      ||| ||  |||||  |||||| |||| ||||| |||||||||||    
T  31528008 accaactcgtcataattactcaaaatattatcacgtttgaaagctt 31528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31029172 - 31029248
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| ||||||  ||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| ||||||||    
T  31029172 aatctagccaatttacttctccattcagagatatctcgaccaaacaaaaatgagcccaatactttaatagctagtgg 31029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 31477548 - 31477478
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||||||||||||||||||||| | ||| |||||| |||||||||| ||||| |||| |||||| |||||    
T  31477548 gccaatgcacttctccattcagatatatcccgaccaaacaaaaatgaacccaatactttaattgcaagtgg 31477478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 31158740 - 31158813
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctag 76  Q
    ||||| |||||||||||| |||||||| |||  ||||||||| |||||||||| ||||| |||| |||||||||    
T  31158740 aatctagccaatgcacttttccattcatagatgtctcgaccaaacaaaaatgatcccaatactttaattgctag 31158813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 31158951 - 31159076
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtttatccag 313  Q
    |||| ||||||| |||| ||||||||||  |||||||||||||||  |  ||||||||||||| |||||  ||||| ||  | |   | | |||||| ||    
T  31158951 catcaactccatactctttcaagatatgttcatctctagaaattataacgattctactccctgcacctaagcattcacgattcacagctaatttatcaag 31159050  T
Q  314 ttgttcaactttatcaacattatcaa 339  Q
    ||||||||||||||||||||||||||    
T  31159051 ttgttcaactttatcaacattatcaa 31159076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 31490044 - 31489919
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtttatccag 313  Q
    |||| ||||||| |||| ||||||||||  |||||| ||||||||  || ||||||||||||| |||||  ||||| ||  | |   ||| |||||| ||    
T  31490044 catcaactccatactctttcaagatatgttcatctccagaaattataatgattctactccctgcacctaaccattcacgattcacacccaatttatcaag 31489945  T
Q  314 ttgttcaactttatcaacattatcaa 339  Q
    |||| |||||||||||||||||||||    
T  31489944 ttgtccaactttatcaacattatcaa 31489919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 31033508 - 31033603
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatatttta 99  Q
    ||||| |||||||||||| |||||||||||| || ||||||| || ||||||||||||| |||| ||||||  |||| | ||||||| |||| ||||    
T  31033508 aatctagccaatgcacttgtccattcagagatatttcgaccacac-aaaatgagcccaatactttaattgccggtggtaggccatcaacataattta 31033603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 31019495 - 31019630
Alignment:
Q  207 taaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtt 306  Q
    |||| |||||| ||||||| |||  ||||||||||  |||||||||||||||  || ||||||||||||  ||||| |||||| ||  |||   | |  |    
T  31019495 taaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctacacctaaacattcacgatttaaagctaact 31019594  T
Q  307 tatccagttgttcaactttatcaacattatcaagaa 342  Q
    |||| || ||||||||||||||||||||||| ||||    
T  31019595 tatcgagctgttcaactttatcaacattatcgagaa 31019630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 31029376 - 31029511
Alignment:
Q  207 taaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtt 306  Q
    |||| |||||| ||||||| |||  ||||||||||  |||||||||||||||  || ||||||||||||| ||||| | |||| ||  |||   | |  |    
T  31029376 taaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctgcacctaaatattcacgatttaaagctaact 31029475  T
Q  307 tatccagttgttcaactttatcaacattatcaagaa 342  Q
    |||| || ||||||||||||||||||||||| ||||    
T  31029476 tatcgagctgttcaactttatcaacattatcgagaa 31029511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 31502671 - 31502606
Alignment:
Q  8 ggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgcta 75  Q
    ||||||||||||| |||||||| |||  |||||||||  ||||||||||||| | |||||||||||||    
T  31502671 ggccaatgcacttttccattcaaagatgtctcgacca--caaaaatgagccctatacttcaattgcta 31502606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 31149839 - 31149930
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcata 94  Q
    ||||| |||||||||||| |||||||| | | || |||| |||||||||| ||||| || |||| ||||||||| || | ||||| ||||||    
T  31149839 aatcttgccaatgcacttttccattcaaaaatatttcgatcatacaaaaacgagcctaatactttaattgctagaggtaggccattagcata 31149930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 31477248 - 31477218
Alignment:
Q  309 tccagttgttcaactttatcaacattatcaa 339  Q
    |||||||||||||||||||||||||||||||    
T  31477248 tccagttgttcaactttatcaacattatcaa 31477218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 31502370 - 31502340
Alignment:
Q  309 tccagttgttcaactttatcaacattatcaa 339  Q
    |||||||||||||||||||||||||||||||    
T  31502370 tccagttgttcaactttatcaacattatcaa 31502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 31033784 - 31033820
Alignment:
Q  315 tgttcaactttatcaacattatcaagaactacaaggg 351  Q
    |||||||||| |||||||||||||||||||| |||||    
T  31033784 tgttcaacttgatcaacattatcaagaactagaaggg 31033820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 90 - 365
Target Start/End: Complemental strand, 14724851 - 14724579
Alignment:
Q  90 gcatattttagtacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagat 189  Q
    |||||||  |||||||||| |||| ||| |   ||||| |||| || ||| ||| |||| ||||||||||||||||||||| |||||||||||||| |||    
T  14724851 gcatattcgagtacatcatctgtcgagtttatgtaaccgctcatgacatcgtcaatttttaaagctttcctacaaaacaattgaagggcatcattatgat 14724752  T
Q  190 ctaatgctcgtacttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattc 289  Q
     ||    ||| ||||  |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| ||||  ||||| ||||     
T  14724751 ttatgagtcgaactttgtaaacttcatctactccatgctctctgaagatatggctatctctagatattacgatgattctacttcctgtgcctagccatta 14724652  T
Q  290 tcgtgttatgtccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    || | | ||| ||| ||| || ||||||||||||   | |||||||||||||||| |||| |||||| || |||||    
T  14724651 tcatttcatggccaatttttcaagttgttcaact---tgaacattatcaagaacttcaagagattttatttgacat 14724579  T

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Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 90 - 343
Target Start/End: Original strand, 17598911 - 17599168
Alignment:
Q  90 gcatattttagtacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagat 189  Q
    |||||||  |||||||||| |||| ||| |   ||||| |||| || ||| ||| |||| ||||||||||||||||||||| |||||||||||||| |||    
T  17598911 gcatattcgagtacatcatctgtcgagtttatgtaaccgctcatgacatcgtcaatttttaaagctttcctacaaaacaattgaagggcatcattatgat 17599010  T
Q  190 ctaatgctcgtacttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacct----agac 285  Q
     ||    ||| ||||  |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| | ||  |||    || |    
T  17599011 ttatgagtcgaactttgtaaacttcatctactccatgctctctgaagatatggctatctctagatattacgatgattctacttcttgtgcctagccagcc 17599110  T
Q  286 attctcgtgttatgtccagtttatccagttgttcaactttatcaacattatcaagaac 343  Q
    |||||| | | ||| ||| ||| |||||||||||||||| || |||||||||||||||    
T  17599111 attctcatttcatggccaatttttccagttgttcaacttgatgaacattatcaagaac 17599168  T

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Target: scaffold0428 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8263 - 8333
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    |||||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||  ||||||||||||    
T  8263 gccaatgcactcttccattcagtcacattacgaccagacaaaaatgagcccaatactgtaattgctagtgg 8333  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 17439411 - 17439335
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||  |||||||||  ||||  | |||| |||||||||||||||  |||| ||||||||||||    
T  17439411 aatctagccaatgcactcttccattcagtcacattacaaccaaacaaaaatgagcccattactttaattgctagtgg 17439335  T

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