View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20061_high_28 (Length: 207)
Name: NF20061_high_28
Description: NF20061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20061_high_28 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 29302860 - 29303038
Alignment:
| Q |
15 |
aatataaaacatgttaaaaataagataagtaggtcaagatctctcgcgaagcccacaagtatctactagctatttgtctgcgactgtacgcaatataaga |
114 |
Q |
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| T |
29302860 |
aatataaaacatgttaaaaataagataagtaggtcaagatctctcgcgaagcccacaagtatgtactagctatttgtctgcgactgtacgcaatataaga |
29302959 |
T |
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| Q |
115 |
agagttaatcaattgtatgcaatataaagcagcataatgaatatgtttgtacctgtaaacaagtacaagagttacttat |
193 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29302960 |
agagttgatcaattgtatgcaatataaagcagcataatgaatatgtttgtacctgtaaacaagtacaagagttacttat |
29303038 |
T |
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