View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20061_low_11 (Length: 368)

Name: NF20061_low_11
Description: NF20061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20061_low_11
NF20061_low_11
[»] chr6 (7 HSPs)
chr6 (1-365)||(13609351-13609715)
chr6 (3-94)||(33389569-33389660)
chr6 (3-76)||(31561319-31561392)
chr6 (3-75)||(9168268-9168340)
chr6 (214-282)||(31561110-31561178)
chr6 (11-79)||(33059068-33059136)
chr6 (3-79)||(33411450-33411526)
[»] chr4 (16 HSPs)
chr4 (9-365)||(31245300-31245656)
chr4 (3-79)||(31019291-31019367)
chr4 (11-156)||(31527908-31528053)
chr4 (3-79)||(31029172-31029248)
chr4 (9-79)||(31477478-31477548)
chr4 (3-76)||(31158740-31158813)
chr4 (214-339)||(31158951-31159076)
chr4 (214-339)||(31489919-31490044)
chr4 (3-99)||(31033508-31033603)
chr4 (207-342)||(31019495-31019630)
chr4 (207-342)||(31029376-31029511)
chr4 (8-75)||(31502606-31502671)
chr4 (3-94)||(31149839-31149930)
chr4 (309-339)||(31477218-31477248)
chr4 (309-339)||(31502340-31502370)
chr4 (315-351)||(31033784-31033820)
[»] chr7 (1 HSPs)
chr7 (90-365)||(14724579-14724851)
[»] chr5 (1 HSPs)
chr5 (90-343)||(17598911-17599168)
[»] scaffold0428 (1 HSPs)
scaffold0428 (9-79)||(8263-8333)
[»] chr2 (1 HSPs)
chr2 (3-79)||(17439335-17439411)


Alignment Details
Target: chr6 (Bit Score: 357; Significance: 0; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 13609715 - 13609351
Alignment:
Q  1 ttaatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609715 ttaatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttag 13609616  T
Q  101 tacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609615 tacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgt 13609516  T
Q  201 acttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609515 acttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgt 13609416  T
Q  301 ccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13609415 ccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttatttgacat 13609351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 33389569 - 33389660
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcata 94  Q
    ||||| |||||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||| ||||||||||||||  |||| ||||||    
T  33389569 aatctagccaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgctagtggaagaccattagcata 33389660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 31561392 - 31561319
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctag 76  Q
    ||||||| |||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||  |||||||||    
T  31561392 aatctggacaatgcactcttccattcagtcacattacgaccaaacaaaaatgagcccaatactgtaattgctag 31561319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 9168268 - 9168340
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgcta 75  Q
    ||||| |||||||||||  | |||||||  ||||  |||||| |||||||||||||||| |||| ||||||||    
T  9168268 aatctagccaatgcactcttgcattcagtcacattacgaccaaacaaaaatgagcccaatactttaattgcta 9168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 31561178 - 31561110
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaaccta 282  Q
    |||| ||||||| |||| |||| |||||  ||||||||||||| |  |||||||||||||||| |||||    
T  31561178 catccactccatactctttcaatatatgctcatctctagaaatgataataattctactccctgcaccta 31561110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 33059068 - 33059136
Alignment:
Q  11 caatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    |||||||||  |||||||||  ||||  |||||| ||||||| |||||||| |||| ||||||||||||    
T  33059068 caatgcactcttccattcagtcacattacgaccaaacaaaaacgagcccaatactttaattgctagtgg 33059136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 33411450 - 33411526
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||  |||||||||  |||    ||||| |||||||||||||||| |||| ||||||||||||    
T  33411450 aatctagccaatgcactcttccattcagccacactatgaccaaacaaaaatgagcccaatactttaattgctagtgg 33411526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 9 - 365
Target Start/End: Complemental strand, 31245656 - 31245300
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttagtacatcat 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||  |||||| ||||| ||||||    
T  31245656 gccaatgcacttctccattcagagacatctcggccatacaaaaatgagcccaaaactttaattgctaatggaaggccattggcatatgttagtgcatcat 31245557  T
Q  109 atgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagatctaatgctcgtacttcata 208  Q
     |||||||| |   ||||| |||| |||||||||||| |||||||| ||||||||||||||| ||||||||| |||| |||| ||   ||| ||||  ||    
T  31245556 ctgtcaagtatatgtaaccgctcatgatatcatcactcttgaaagccttcctacaaaacaattgaagggcattattatgatccaagagtcgaactttgta 31245457  T
Q  209 aatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagttta 308  Q
     | ||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||| ||||||||||| ||  ||| ||||    
T  31245456 cacttcatctactccatgctctctcaagatatgaacatctctagaaattatgatgattctactccctgtgcctagccattctcgtgtcatagccaattta 31245357  T
Q  309 tccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| || |||||    
T  31245356 tccagttgttcaacttgatcaacattatcaagaactataagggattttatttgacat 31245300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31019291 - 31019367
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||| ||||||||||||    
T  31019291 aatctagccaatgcacttctccattcggagatatctcgaccaaacaaaaatgagcccaatactttaattgctagtgg 31019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 31527908 - 31528053
Alignment:
Q  11 caatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatattttagtacatcatat 110  Q
    ||||||||||||||||||| | | |||||||||| ||||||||||||||||  ||| ||| |||||||| | ||||| |||||| |||||||  ||||||    
T  31527908 caatgcacttctccattcataaatatctcgaccaaacaaaaatgagcccaatgctttaatcgctagtggtaagccattagcataatttagtatctcatat 31528007  T
Q  111 gtcaagtctgcataaccactcaagatatcatcacttttgaaagctt 156  Q
      ||| ||  |||||  |||||| |||| ||||| |||||||||||    
T  31528008 accaactcgtcataattactcaaaatattatcacgtttgaaagctt 31528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31029172 - 31029248
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| ||||||  ||||||||||||||||| |||||||||| |||||||||||||||| |||| ||| ||||||||    
T  31029172 aatctagccaatttacttctccattcagagatatctcgaccaaacaaaaatgagcccaatactttaatagctagtgg 31029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 31477548 - 31477478
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||||||||||||||||||||| | ||| |||||| |||||||||| ||||| |||| |||||| |||||    
T  31477548 gccaatgcacttctccattcagatatatcccgaccaaacaaaaatgaacccaatactttaattgcaagtgg 31477478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 31158740 - 31158813
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctag 76  Q
    ||||| |||||||||||| |||||||| |||  ||||||||| |||||||||| ||||| |||| |||||||||    
T  31158740 aatctagccaatgcacttttccattcatagatgtctcgaccaaacaaaaatgatcccaatactttaattgctag 31158813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 31158951 - 31159076
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtttatccag 313  Q
    |||| ||||||| |||| ||||||||||  |||||||||||||||  |  ||||||||||||| |||||  ||||| ||  | |   | | |||||| ||    
T  31158951 catcaactccatactctttcaagatatgttcatctctagaaattataacgattctactccctgcacctaagcattcacgattcacagctaatttatcaag 31159050  T
Q  314 ttgttcaactttatcaacattatcaa 339  Q
    ||||||||||||||||||||||||||    
T  31159051 ttgttcaactttatcaacattatcaa 31159076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 31490044 - 31489919
Alignment:
Q  214 catctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtttatccag 313  Q
    |||| ||||||| |||| ||||||||||  |||||| ||||||||  || ||||||||||||| |||||  ||||| ||  | |   ||| |||||| ||    
T  31490044 catcaactccatactctttcaagatatgttcatctccagaaattataatgattctactccctgcacctaaccattcacgattcacacccaatttatcaag 31489945  T
Q  314 ttgttcaactttatcaacattatcaa 339  Q
    |||| |||||||||||||||||||||    
T  31489944 ttgtccaactttatcaacattatcaa 31489919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 31033508 - 31033603
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcatatttta 99  Q
    ||||| |||||||||||| |||||||||||| || ||||||| || ||||||||||||| |||| ||||||  |||| | ||||||| |||| ||||    
T  31033508 aatctagccaatgcacttgtccattcagagatatttcgaccacac-aaaatgagcccaatactttaattgccggtggtaggccatcaacataattta 31033603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 31019495 - 31019630
Alignment:
Q  207 taaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtt 306  Q
    |||| |||||| ||||||| |||  ||||||||||  |||||||||||||||  || ||||||||||||  ||||| |||||| ||  |||   | |  |    
T  31019495 taaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctacacctaaacattcacgatttaaagctaact 31019594  T
Q  307 tatccagttgttcaactttatcaacattatcaagaa 342  Q
    |||| || ||||||||||||||||||||||| ||||    
T  31019595 tatcgagctgttcaactttatcaacattatcgagaa 31019630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 342
Target Start/End: Original strand, 31029376 - 31029511
Alignment:
Q  207 taaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattctcgtgttatgtccagtt 306  Q
    |||| |||||| ||||||| |||  ||||||||||  |||||||||||||||  || ||||||||||||| ||||| | |||| ||  |||   | |  |    
T  31029376 taaacttcatcaactccatactcattcaagatatgctcatctctagaaattataatgattctactccctgcacctaaatattcacgatttaaagctaact 31029475  T
Q  307 tatccagttgttcaactttatcaacattatcaagaa 342  Q
    |||| || ||||||||||||||||||||||| ||||    
T  31029476 tatcgagctgttcaactttatcaacattatcgagaa 31029511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 31502671 - 31502606
Alignment:
Q  8 ggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgcta 75  Q
    ||||||||||||| |||||||| |||  |||||||||  ||||||||||||| | |||||||||||||    
T  31502671 ggccaatgcacttttccattcaaagatgtctcgacca--caaaaatgagccctatacttcaattgcta 31502606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 31149839 - 31149930
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtggaatgccatcagcata 94  Q
    ||||| |||||||||||| |||||||| | | || |||| |||||||||| ||||| || |||| ||||||||| || | ||||| ||||||    
T  31149839 aatcttgccaatgcacttttccattcaaaaatatttcgatcatacaaaaacgagcctaatactttaattgctagaggtaggccattagcata 31149930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 31477248 - 31477218
Alignment:
Q  309 tccagttgttcaactttatcaacattatcaa 339  Q
    |||||||||||||||||||||||||||||||    
T  31477248 tccagttgttcaactttatcaacattatcaa 31477218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 339
Target Start/End: Complemental strand, 31502370 - 31502340
Alignment:
Q  309 tccagttgttcaactttatcaacattatcaa 339  Q
    |||||||||||||||||||||||||||||||    
T  31502370 tccagttgttcaactttatcaacattatcaa 31502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 31033784 - 31033820
Alignment:
Q  315 tgttcaactttatcaacattatcaagaactacaaggg 351  Q
    |||||||||| |||||||||||||||||||| |||||    
T  31033784 tgttcaacttgatcaacattatcaagaactagaaggg 31033820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 90 - 365
Target Start/End: Complemental strand, 14724851 - 14724579
Alignment:
Q  90 gcatattttagtacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagat 189  Q
    |||||||  |||||||||| |||| ||| |   ||||| |||| || ||| ||| |||| ||||||||||||||||||||| |||||||||||||| |||    
T  14724851 gcatattcgagtacatcatctgtcgagtttatgtaaccgctcatgacatcgtcaatttttaaagctttcctacaaaacaattgaagggcatcattatgat 14724752  T
Q  190 ctaatgctcgtacttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacctagacattc 289  Q
     ||    ||| ||||  |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| ||||  ||||| ||||     
T  14724751 ttatgagtcgaactttgtaaacttcatctactccatgctctctgaagatatggctatctctagatattacgatgattctacttcctgtgcctagccatta 14724652  T
Q  290 tcgtgttatgtccagtttatccagttgttcaactttatcaacattatcaagaactacaagggattttcttcgacat 365  Q
    || | | ||| ||| ||| || ||||||||||||   | |||||||||||||||| |||| |||||| || |||||    
T  14724651 tcatttcatggccaatttttcaagttgttcaact---tgaacattatcaagaacttcaagagattttatttgacat 14724579  T

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Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 90 - 343
Target Start/End: Original strand, 17598911 - 17599168
Alignment:
Q  90 gcatattttagtacatcatatgtcaagtctgcataaccactcaagatatcatcacttttgaaagctttcctacaaaacaatcgaagggcatcattaagat 189  Q
    |||||||  |||||||||| |||| ||| |   ||||| |||| || ||| ||| |||| ||||||||||||||||||||| |||||||||||||| |||    
T  17598911 gcatattcgagtacatcatctgtcgagtttatgtaaccgctcatgacatcgtcaatttttaaagctttcctacaaaacaattgaagggcatcattatgat 17599010  T
Q  190 ctaatgctcgtacttcataaatttcatctactccatgctctctcaagatatggccatctctagaaattacgataattctactccctgaacct----agac 285  Q
     ||    ||| ||||  |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| | ||  |||    || |    
T  17599011 ttatgagtcgaactttgtaaacttcatctactccatgctctctgaagatatggctatctctagatattacgatgattctacttcttgtgcctagccagcc 17599110  T
Q  286 attctcgtgttatgtccagtttatccagttgttcaactttatcaacattatcaagaac 343  Q
    |||||| | | ||| ||| ||| |||||||||||||||| || |||||||||||||||    
T  17599111 attctcatttcatggccaatttttccagttgttcaacttgatgaacattatcaagaac 17599168  T

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Target: scaffold0428 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8263 - 8333
Alignment:
Q  9 gccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    |||||||||||  |||||||||  ||||  |||||| |||||||||||||||| |||  ||||||||||||    
T  8263 gccaatgcactcttccattcagtcacattacgaccagacaaaaatgagcccaatactgtaattgctagtgg 8333  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 17439411 - 17439335
Alignment:
Q  3 aatctggccaatgcacttctccattcagagacatctcgaccatacaaaaatgagcccaacacttcaattgctagtgg 79  Q
    ||||| |||||||||||  |||||||||  ||||  | |||| |||||||||||||||  |||| ||||||||||||    
T  17439411 aatctagccaatgcactcttccattcagtcacattacaaccaaacaaaaatgagcccattactttaattgctagtgg 17439335  T

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