View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20062_low_13 (Length: 294)

Name: NF20062_low_13
Description: NF20062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20062_low_13
NF20062_low_13
[»] chr4 (32 HSPs)
chr4 (133-274)||(23707850-23707991)
chr4 (133-248)||(41861735-41861849)
chr4 (133-248)||(52680485-52680599)
chr4 (133-248)||(23009657-23009772)
chr4 (137-223)||(23707968-23708054)
chr4 (133-246)||(23009970-23010083)
chr4 (195-272)||(23708056-23708133)
chr4 (133-248)||(41946283-41946397)
chr4 (146-248)||(8119469-8119577)
chr4 (146-248)||(8119793-8119895)
chr4 (7-125)||(23707245-23707366)
chr4 (147-246)||(26603671-26603770)
chr4 (146-248)||(8119577-8119685)
chr4 (146-248)||(8119685-8119793)
chr4 (150-244)||(23009771-23009865)
chr4 (156-244)||(54242942-54243030)
chr4 (146-237)||(8119372-8119469)
chr4 (156-244)||(54242787-54242875)
chr4 (156-244)||(11659283-11659371)
chr4 (190-248)||(50234768-50234825)
chr4 (156-244)||(22453763-22453850)
chr4 (156-251)||(48808346-48808441)
chr4 (190-244)||(54243090-54243144)
chr4 (51-125)||(55466351-55466425)
chr4 (156-244)||(11654419-11654507)
chr4 (200-248)||(23009516-23009564)
chr4 (162-237)||(8120225-8120300)
chr4 (192-251)||(34336829-34336888)
chr4 (156-214)||(11654618-11654676)
chr4 (156-246)||(39405529-39405619)
chr4 (243-275)||(23707846-23707878)
chr4 (193-245)||(40910124-40910176)
[»] chr7 (22 HSPs)
chr7 (133-248)||(13604751-13604866)
chr7 (139-248)||(23096833-23096942)
chr7 (133-248)||(7891508-7891622)
chr7 (133-248)||(22004731-22004845)
chr7 (135-245)||(40239318-40239428)
chr7 (1-125)||(23096232-23096354)
chr7 (137-248)||(29953953-29954064)
chr7 (156-251)||(34406586-34406681)
chr7 (156-240)||(2734375-2734459)
chr7 (156-244)||(15236312-15236400)
chr7 (155-244)||(16717855-16717944)
chr7 (155-244)||(17692065-17692154)
chr7 (156-244)||(2733618-2733706)
chr7 (156-244)||(2734074-2734162)
chr7 (158-244)||(2733775-2733861)
chr7 (190-244)||(15236616-15236670)
chr7 (190-244)||(34406467-34406521)
chr7 (51-122)||(23096503-23096572)
chr7 (156-244)||(34406745-34406833)
chr7 (193-244)||(32200410-32200461)
chr7 (192-244)||(32661098-32661150)
chr7 (246-274)||(40239403-40239431)
[»] chr3 (27 HSPs)
chr3 (133-246)||(53522690-53522803)
chr3 (135-248)||(40817377-40817490)
chr3 (133-248)||(36093669-36093783)
chr3 (133-248)||(18199570-18199684)
chr3 (133-248)||(26949265-26949379)
chr3 (1-125)||(40817873-40818000)
chr3 (156-251)||(40822300-40822395)
chr3 (156-248)||(40822761-40822853)
chr3 (156-244)||(49067926-49068014)
chr3 (156-244)||(53927540-53927628)
chr3 (193-248)||(36006893-36006948)
chr3 (55-121)||(14602365-14602431)
chr3 (156-244)||(40822147-40822235)
chr3 (190-244)||(36946478-36946532)
chr3 (156-244)||(40822610-40822698)
chr3 (156-244)||(53927128-53927216)
chr3 (164-244)||(55369550-55369630)
chr3 (164-244)||(55369705-55369785)
chr3 (156-244)||(40822455-40822543)
chr3 (192-244)||(51654896-51654948)
chr3 (156-244)||(53927424-53927512)
chr3 (156-219)||(36946756-36946819)
chr3 (193-244)||(40793631-40793682)
chr3 (233-274)||(26949352-26949393)
chr3 (233-274)||(40817465-40817506)
chr3 (192-244)||(51654833-51654885)
chr3 (156-244)||(53927283-53927371)
[»] chr6 (16 HSPs)
chr6 (133-248)||(30142458-30142572)
chr6 (134-245)||(25000208-25000319)
chr6 (133-248)||(440309-440425)
chr6 (133-248)||(30142298-30142413)
chr6 (133-248)||(3589426-3589540)
chr6 (1-121)||(440862-440984)
chr6 (156-244)||(21855417-21855505)
chr6 (142-248)||(6399535-6399636)
chr6 (157-244)||(26899663-26899750)
chr6 (156-244)||(21854930-21855018)
chr6 (156-244)||(26899808-26899896)
chr6 (193-248)||(4621123-4621178)
chr6 (156-213)||(21855539-21855596)
chr6 (190-244)||(21854809-21854863)
chr6 (158-244)||(21855103-21855189)
chr6 (164-244)||(21855270-21855350)
[»] chr5 (22 HSPs)
chr5 (133-235)||(25756942-25757044)
chr5 (133-248)||(21267045-21267160)
chr5 (133-248)||(32673017-32673131)
chr5 (149-248)||(38096512-38096611)
chr5 (133-235)||(25790757-25790859)
chr5 (1-121)||(21267909-21268031)
chr5 (156-244)||(17414346-17414434)
chr5 (156-241)||(38096973-38097058)
chr5 (51-122)||(21267655-21267726)
chr5 (156-244)||(17547733-17547821)
chr5 (156-244)||(35393492-35393580)
chr5 (156-244)||(35393647-35393735)
chr5 (156-244)||(38096679-38096767)
chr5 (156-244)||(41041789-41041877)
chr5 (156-237)||(38096825-38096906)
chr5 (156-244)||(32719209-32719297)
chr5 (164-244)||(41041968-41042048)
chr5 (190-244)||(17547462-17547516)
chr5 (189-244)||(38097057-38097112)
chr5 (156-244)||(35394126-35394213)
chr5 (156-220)||(35394285-35394349)
chr5 (156-244)||(41042122-41042210)
[»] chr2 (10 HSPs)
chr2 (133-248)||(40603495-40603609)
chr2 (137-248)||(13906031-13906141)
chr2 (133-248)||(26453660-26453774)
chr2 (156-244)||(38328108-38328196)
chr2 (156-244)||(38328970-38329058)
chr2 (156-244)||(39087636-39087724)
chr2 (156-241)||(38328556-38328641)
chr2 (156-244)||(38327916-38328004)
chr2 (156-244)||(38328254-38328342)
chr2 (156-244)||(39087798-39087886)
[»] chr1 (6 HSPs)
chr1 (133-248)||(2047110-2047224)
chr1 (133-248)||(36461788-36461902)
chr1 (134-248)||(35596817-35596929)
chr1 (146-248)||(35597873-35597974)
chr1 (193-248)||(21055889-21055944)
chr1 (208-248)||(8256237-8256277)
[»] scaffold0121 (1 HSPs)
scaffold0121 (133-248)||(41548-41662)
[»] chr8 (9 HSPs)
chr8 (133-248)||(14996340-14996454)
chr8 (144-241)||(35607023-35607119)
chr8 (133-246)||(23274383-23274496)
chr8 (156-244)||(41843994-41844082)
chr8 (156-248)||(41844193-41844285)
chr8 (156-244)||(16913986-16914073)
chr8 (156-244)||(41843839-41843927)
chr8 (182-248)||(35606956-35607019)
chr8 (156-242)||(14994037-14994123)
[»] scaffold0090 (4 HSPs)
scaffold0090 (159-244)||(13892-13977)
scaffold0090 (156-244)||(13425-13513)
scaffold0090 (156-244)||(13587-13675)
scaffold0090 (156-244)||(13735-13823)
[»] scaffold0246 (2 HSPs)
scaffold0246 (156-248)||(9799-9891)
scaffold0246 (156-244)||(9644-9732)
[»] scaffold0891 (1 HSPs)
scaffold0891 (156-244)||(2077-2166)


Alignment Details
Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 133 - 274
Target Start/End: Original strand, 23707850 - 23707991
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||  || |||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  23707850 ggagatttctgcaatttgatattttaaataggggtaatacagtaaaagcaagcactgaatttagcttaaaattagggcaacaattagcattcgggttaac 23707949  T
Q  233 tttaataaataaaagaagatttctgcaatttgatattttaaa 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  23707950 tttaataaataaaagaaaatttctgcaatttgatattttaaa 23707991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 41861735 - 41861849
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  41861735 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 41861833  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  41861834 tttaataaataaaaga 41861849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 52680599 - 52680485
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  52680599 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 52680501  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  52680500 tttaataaataaaaga 52680485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 23009657 - 23009772
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||  ||||||||  | ||||||    
T  23009657 ggagattactgcaatttgatattctaaacaggggtaatacagtaaaagtaaacactgaatttaggttaaaattagggcaaacattagcatccgtgttaac 23009756  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  23009757 tttaataaataaaaga 23009772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 23707968 - 23708054
Alignment:
Q  137 atttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatt 223  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  23707968 atttctgcaatttgatattttaaacaggggtaatacagtaaaaaaaagcactgaatttaggttaaaattagggcaacaattagcatt 23708054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 23009970 - 23010083
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||  ||||||| |||||| ||||||||||||||||  ||||||||  ||||||||    
T  23009970 ggagatttctgcaatttaatattttgaacaggggtaatacagtaaaagcaaacactgaatttaagttaaaattagggcaaacattagcatccgggttaac 23010069  T
Q  233 tttaataaataaaa 246  Q
    ||||||||||||||    
T  23010070 tttaataaataaaa 23010083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 23708056 - 23708133
Alignment:
Q  195 aggttaaaattagggcaacaattagcatttgggttaactttaataaataaaagaagatttctgcaatttgatatttta 272  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23708056 aggttaaaattagggcaacaattagcattcgggttaactttaataaataaaagaagatttctgcaattttatatttta 23708133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 41946283 - 41946397
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || || | |||||| |||||| |||||||||||||||||||  ||||||||    
T  41946283 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcattgaatttaagttaaa-ttagggcaacaattagcatccgggttaac 41946381  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  41946382 tttaataaataaaaga 41946397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 8119577 - 8119469
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggtt------aaaattagggcaacaattagcatttgggttaactttaata 239  Q
    ||||||||||||||||||||||||||||||||||  || |||| ||||||||||      |||||||||||||||||||||||| |||||||||||||||    
T  8119577 atttgatattttaaacaggggtaatacagtaaaagcaagcactgaatttaggtttaggttaaaattagggcaacaattagcattcgggttaactttaata 8119478  T
Q  240 aataaaaga 248  Q
    |||||||||    
T  8119477 aataaaaga 8119469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 8119895 - 8119793
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaa 245  Q
    |||| |||||||||||||||||||||||||||||  || || | ||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  8119895 attttatattttaaacaggggtaatacagtaaaagcaagcattgaatttaggttaaagttagggcaacaattaacattctggttaactttaataaataaa 8119796  T
Q  246 aga 248  Q
    |||    
T  8119795 aga 8119793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 23707245 - 23707366
Alignment:
Q  7 tgaaacacaaatagcaacaacaaagcatagaaacnnnnnnnnnn---tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaatggata 103  Q
    ||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23707245 tgaaacacaaatagcaacaacaaagcatagaaacaaaacaaaaaaaatatcaataagtaacaaagcataaaaacctaacctgaagcacctgcaatcgata 23707344  T
Q  104 gattcagtatggaagaacggac 125  Q
    ||||  ||||||||||||||||    
T  23707345 gatttggtatggaagaacggac 23707366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 26603671 - 26603770
Alignment:
Q  147 tttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaa 246  Q
    |||||||||||||||||||||||||||||||||  ||||||| | |||||| |||||||||||||||| ||||||||  | |||||||| ||||||||||    
T  26603671 tttgatattttaaacaggggtaatacagtaaaagtaaacactgattttaggctaaaattagggcaacatttagcattcagcttaactttgataaataaaa 26603770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 8119685 - 8119577
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggtt------aaaattagggcaacaattagcatttgggttaactttaata 239  Q
    |||||||||||||| |||||||||||||||||||  || |||| ||||||||||      |||||||||||||| ||||||||| |||||||||||||||    
T  8119685 atttgatattttaagcaggggtaatacagtaaaagcaagcactgaatttaggtttaggataaaattagggcaacgattagcattcgggttaactttaata 8119586  T
Q  240 aataaaaga 248  Q
    |||||||||    
T  8119585 aataaaaga 8119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 8119793 - 8119685
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggtt------aaaattagggcaacaattagcatttgggttaactttaata 239  Q
    |||||||||||||| ||||||||||| |||||||  || |||| ||||||||||      |||||||||||||||||||||||| || ||||||||||||    
T  8119793 atttgatattttaagcaggggtaatagagtaaaagcaagcactgaatttaggtttaggataaaattagggcaacaattagcattcggattaactttaata 8119694  T
Q  240 aataaaaga 248  Q
    |||||||||    
T  8119693 aataaaaga 8119685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 23009771 - 23009865
Alignment:
Q  150 gatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||| |||||||||||||  || |||| ||||||||||||||| |||||||  ||||| ||  ||||||||||||||||||||    
T  23009771 gatattttaaacagggctaatacagtaaaagcaagcactgaatttaggttaaaataagggcaaacattagaatccgggttaactttaataaataa 23009865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 54243030 - 54242942
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||| |||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  54243030 ttaaacgggggtaatacagtaaaaataagcatagaatttaggttaaaattagggcaacagttagcgtctgggttaactttaataaataa 54242942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 8119469 - 8119372
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaattta------ggttaaaattagggcaacaattagcatttgggttaactttaa 237  Q
    |||||||||||||||||||||| |||||||||||  || |||| ||||||      |||||||||||||||||||||||||||| || ||||||||||    
T  8119469 atttgatattttaaacaggggtgatacagtaaaagcaagcactgaatttaagtttaggttaaaattagggcaacaattagcattcggattaactttaa 8119372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 54242875 - 54242787
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| | || ||||||||||||||||||    
T  54242875 ttaaacatgggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagcgtctgagttaactttaataaataa 54242787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 11659283 - 11659371
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  11659283 ttaaagaggggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 11659371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 50234768 - 50234825
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||||||||||||||||||||||||| || || | |||||||||||||||||||||    
T  50234768 aatttaggttaaaattagggcaacaattatca-ttcgattaactttaataaataaaaga 50234825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 22453850 - 22453763
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||| ||||||||||  || ||  |||||||||||||||||||| ||||| ||| |  || |||||||||||||||||||    
T  22453850 ttaaacaggggtagtacagtaaaagtaagcataaaatttaggttaaaattaggacaacagttaac-gttcggttaactttaataaataa 22453763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 48808441 - 48808346
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaagaaga 251  Q
    ||||| |||| |||||||||| ||  || || |||| |||||||||| ||||||||||| || ||||| |||||||||||||  ||||| ||||||    
T  48808441 ttaaatagggctaatacagtataattaatcattaaagttaggttaaatttagggcaacattttgcattcgggttaactttaaggaataagagaaga 48808346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 54243144 - 54243090
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  ||||| |  ||||||||||||||||||||    
T  54243144 aatttaggttaaaattagggcaaccgttagcgtccgggttaactttaataaataa 54243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 55466425 - 55466351
Alignment:
Q  51 tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaatggatagattcagtatggaagaacggac 125  Q
    |||||||| | |||||| |||| ||||||||||| ||||| |||| ||||| |||||| ||||| ||||||||||    
T  55466425 tatcaatacgaaacaaaacatagaaacctaacctgaagcaactgcgatggagagattcggtatgaaagaacggac 55466351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 11654419 - 11654507
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| || |||||||||||||||  || ||   |||||||||||||||||||| |||| ||||  |  ||||||||||||||||||||    
T  11654419 ttaaatagaggtaatacagtaaaagtaagcatataatttaggttaaaattagggaaacagttagggtccgggttaactttaataaataa 11654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 23009516 - 23009564
Alignment:
Q  200 aaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    |||||||||||||  ||||||||  ||||||||||||||||||||||||    
T  23009516 aaaattagggcaaacattagcatccgggttaactttaataaataaaaga 23009564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 8120300 - 8120225
Alignment:
Q  162 aggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaa 237  Q
    ||||||||||||||||||  || || ||   ||||||||||  |||||||||||||||| || |||||||||||||    
T  8120300 aggggtaatacagtaaaattaagcattagggttaggttaaatctagggcaacaattagcgttcgggttaactttaa 8120225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 34336888 - 34336829
Alignment:
Q  192 tttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaagaaga 251  Q
    ||||||||||||||||||| | ||| ||| | || ||||||||||||| |||||||||||    
T  34336888 tttaggttaaaattagggctaaaataagcttatgtgttaactttaatatataaaagaaga 34336829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 11654618 - 11654676
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaaca 214  Q
    ||||||| ||||| ||||||||||  || ||  ||||||||||||||||||||||||||    
T  11654618 ttaaacaagggtattacagtaaaagtaagcataaaatttaggttaaaattagggcaaca 11654676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 39405619 - 39405529
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaa 246  Q
    ||||| |||| |||||||||||||  || ||   |||||||||||||  |||||||| | || ||||| ||||||||||||| ||||||||    
T  39405619 ttaaatagggttaatacagtaaaattaagcaaagaatttaggttaaatctagggcaagattttgcattcgggttaactttaagaaataaaa 39405529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 23707846 - 23707878
Alignment:
Q  243 aaaagaagatttctgcaatttgatattttaaat 275  Q
    ||||| |||||||||||||||||||||||||||    
T  23707846 aaaaggagatttctgcaatttgatattttaaat 23707878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 40910176 - 40910124
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaa 245  Q
    ||||||||||  |||| |||||||||||||| ||||||||||| ||| |||||    
T  40910176 ttaggttaaatctaggacaacaattagcattcgggttaacttttatatataaa 40910124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 13604751 - 13604866
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  13604751 ggagatttctgcaatttgatattttaaacaggggtaatacagtaaaagcaagcactgaatttaggttaaaattagggcaacaattagcatatgggttaac 13604850  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  13604851 tttaataaataaaaga 13604866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 23096833 - 23096942
Alignment:
Q  139 ttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaat 238  Q
    ||||| |||||||||||||| ||||||||||||||||||||  ||||||| |||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  23096833 ttatgtaatttgatattttatacaggggtaatacagtaaaagcaaacactgaatttaagttaaaattatcgcaacaattagcattcgggttaactttaat 23096932  T
Q  239 aaataaaaga 248  Q
    ||||||||||    
T  23096933 aaataaaaga 23096942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 7891622 - 7891508
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| ||| ||||||| ||||||||||||||| ||||||||    
T  7891622 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagtt-aaattagagcaacaattagcattcgggttaac 7891524  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  7891523 tttaataaataaaaga 7891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 22004845 - 22004731
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| ||| |||||||| |||||||||||||| ||||||||    
T  22004845 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagtt-aaattaggacaacaattagcattcgggttaac 22004747  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  22004746 tttaataaataaaaga 22004731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 40239428 - 40239318
Alignment:
Q  135 agatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactt 234  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||  ||||||| |||||||||||||||||  |||||||||| |||| ||||||||||    
T  40239428 agatttctgcaatttgatattttaaacagaggtaatagagtaaaagcaaacactgaatttaggttaaaattaaagcaacaattaacattcgggttaactt 40239329  T
Q  235 taataaataaa 245  Q
    |||||||||||    
T  40239328 taataaataaa 40239318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23096232 - 23096354
Alignment:
Q  1 ttaaaatgaaacacaaatagcaacaacaaagcatagaaacnnnnnnnnnntatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaatgg 100  Q
    |||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  23096232 ttaaaatgaaacacaaataggaacaacaaagcatagaaacaaaaaaaaa-tatcaataagtaacaaagcatagaaac-taacctaaagcacctgccatgg 23096329  T
Q  101 atagattcagtatggaagaacggac 125  Q
    |||||||| ||||||||||||||||    
T  23096330 atagattcggtatggaagaacggac 23096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 29954064 - 29953953
Alignment:
Q  137 atttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaacttta 236  Q
    |||| |||| |||||| ||||||| |||| |||||||||||||  || |||| ||||||||||||||||||||||||||||||| ||  | |||||||||    
T  29954064 atttctgcattttgatcttttaaatagggataatacagtaaaagcaagcactgaatttaggttaaaattagggcaacaattagccttctgattaacttta 29953965  T
Q  237 ataaataaaaga 248  Q
    ||||||||||||    
T  29953964 ataaataaaaga 29953953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 34406586 - 34406681
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaagaaga 251  Q
    |||||||||||||||||| |||||  |||||  ||||||| |||||||||||||||||| ||| | | | ||||||||||||||||||| ||||||    
T  34406586 ttaaacaggggtaatacaataaaagtaaacataaaatttatgttaaaattagggcaacagttaacgtctaggttaactttaataaataagagaaga 34406681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 2734375 - 2734459
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataa 240  Q
    ||||||||||||||||||||||||  || ||  |||||||||||||||||||||||||| ||| | |  ||||||||||||||||    
T  2734375 ttaaacaggggtaatacagtaaaagtaagcataaaatttaggttaaaattagggcaacagttaacgtccgggttaactttaataa 2734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 15236400 - 15236312
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||    
T  15236400 ttaaataggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacaattagtgtccgggttaactttaataaataa 15236312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 16717944 - 16717855
Alignment:
Q  155 tttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| ||||||||||||||||  || ||   ||||||| ||||||||||||||||||||| | |  ||||||||||||||||||||    
T  16717944 tttaaacacgggtaatacagtaaaagtaagcatagaatttagattaaaattagggcaacaattaacgtccgggttaactttaataaataa 16717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 17692154 - 17692065
Alignment:
Q  155 tttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| ||||||||||||||||  || ||   ||||||| ||||||||||||||||||||| | |  ||||||||||||||||||||    
T  17692154 tttaaacacgggtaatacagtaaaagtaagcatagaatttagattaaaattagggcaacaattaacgtccgggttaactttaataaataa 17692065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 2733618 - 2733706
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||| ||||||| ||| | |  ||||||||||||||||||||    
T  2733618 ttaaacaggggtaatacagtaaaaacaagcatagaatttaggttaaaattaaggcaacagttaacgtccgggttaactttaataaataa 2733706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 2734074 - 2734162
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| |||||||||||||||  || ||  |||||||||||||||||||||||| | ||| | |  ||||||||||||||||||||    
T  2734074 ttaaacagaggtaatacagtaaaagtaagcataaaatttaggttaaaattagggcaatagttaacgtccgggttaactttaataaataa 2734162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 2733775 - 2733861
Alignment:
Q  158 aaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||  || ||   |||||||||||||||||||||| |||||| |||   ||| |||||||||||||||    
T  2733775 aaacatgggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcatcaattaacatccaggtaaactttaataaataa 2733861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 15236670 - 15236616
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  15236670 aatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 15236616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 34406467 - 34406521
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||| ||| | || |||||||||||||| |||||    
T  34406467 aatttaggttaaaattagggcaacagttaacgttcgggttaactttaattaataa 34406521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 23096503 - 23096572
Alignment:
Q  51 tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaatggatagattcagtatggaagaacg 122  Q
    |||||||  ||||||||||||| ||| | ||||| |||||||||| ||||||||||||  ||||||||||||    
T  23096503 tatcaattcgtaacaaagcatagaaatcaaacctgaagcacctgcgatggatagattc--tatggaagaacg 23096572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 34406745 - 34406833
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| | |||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  | ||||||||||||||||||    
T  34406745 ttaaacagagttaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttaacgtccgagttaactttaataaataa 34406833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 32200461 - 32200410
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||  |||||||||| || ||||| ||||||||||||||||||||    
T  32200461 ttaggttaaatctagggcaacattttgcattcgggttaactttaataaataa 32200410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 32661150 - 32661098
Alignment:
Q  192 tttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||| ||| ||||    
T  32661150 tttaggttaaaattagggcaaaaataagctttcgggttaacttttatagataa 32661098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 40239431 - 40239403
Alignment:
Q  246 agaagatttctgcaatttgatattttaaa 274  Q
    |||||||||||||||||||||||||||||    
T  40239431 agaagatttctgcaatttgatattttaaa 40239403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 53522690 - 53522803
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  53522690 ggagatttctgcaatttgatattttaaacaggggtaataaagtaaaagcaaacactaaatttaggttaaaattagggcaacaattagcattcgagttaac 53522789  T
Q  233 tttaataaataaaa 246  Q
    ||||||||||||||    
T  53522790 tttaataaataaaa 53522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 40817490 - 40817377
Alignment:
Q  135 agatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactt 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  40817490 agatttctgcaatttgatattttaaacaggggtaatacagtaaaagcaagcactaaatttaggttaaaattagggtaacaattagcattcgagttaactt 40817391  T
Q  235 taataaataaaaga 248  Q
    ||||||||||||||    
T  40817390 taataaataaaaga 40817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 36093669 - 36093783
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| |||||||||||||||||||||  |||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  36093669 ggagatttctgcaatttgatattttaaacataggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 36093767  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  36093768 tttaataaataaaaga 36093783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 18199684 - 18199570
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || || | |||||| |||||| |||||||||||||||||||  ||||||||    
T  18199684 ggagatttttgcaatttgatattttaaacatgggtaatacagtaaaagcaagcattgaatttaagttaaa-ttagggcaacaattagcatccgggttaac 18199586  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  18199585 tttaataaataaaaga 18199570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 26949379 - 26949265
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || || | |||||| |||||| ||||| |||||||||||||| ||||||||    
T  26949379 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcattgaatttaagttaaa-ttaggacaacaattagcattcgggttaac 26949281  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  26949280 tttaataaataaaaga 26949265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 40818000 - 40817873
Alignment:
Q  1 ttaaaatgaaacacaaatagcaacaacaaagcatagaaacnnnnnnnnnn---tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaa 97  Q
    ||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||  ||||||||| |    
T  40818000 ttaaaatgaaacacaaatagcaacaacaaagcatagaaacaaaactaaaaaaatatcaataagtaacaaagcataaaaacctaacctggagcacctgcca 40817901  T
Q  98 tggatagattcagtatggaagaacggac 125  Q
    ||||||||||| ||||||||||||||||    
T  40817900 tggatagattcggtatggaagaacggac 40817873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 40822395 - 40822300
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaagaaga 251  Q
    ||||||||| ||||||||||||||  |||||   ||||||||||||||||||||||||| ||| | |  |||||||||||||||||||| ||||||    
T  40822395 ttaaacaggagtaatacagtaaaagtaaacatagaatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataagagaaga 40822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 248
Target Start/End: Complemental strand, 40822853 - 40822761
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||| ||||||||||||||||  || ||   |||||||||||||||||||| |||| ||| | | |||||||||||||||||||||||||    
T  40822853 ttaaacaagggtaatacagtaaaagtaagcatagaatttaggttaaaattagggaaacagttaacgtctgggttaactttaataaataaaaga 40822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 49067926 - 49068014
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  49067926 ttaaacaggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 49068014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 53927540 - 53927628
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||| |||||  || ||  |||||||||||||||||||||||||| ||||| |  ||||||||| ||||||||||    
T  53927540 ttaaacaggggtaatacaataaaagtaagcataaaatttaggttaaaattagggcaacagttagcgtccgggttaactgtaataaataa 53927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 36006893 - 36006948
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  36006893 ttaggttaaatctagggcaacaattagcatttggattaactttaataaataaaaga 36006948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 14602431 - 14602365
Alignment:
Q  55 aataagtaacaaagcataaaaacctaacctcaagcacctgcaatggatagattcagtatggaagaac 121  Q
    |||| ||||||||||||| ||||||||||| || ||||||| |||||||||||| ||||||||||||    
T  14602431 aatacgtaacaaagcatagaaacctaacctgaaacacctgcgatggatagattcggtatggaagaac 14602365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 40822235 - 40822147
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| | ||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  40822235 ttaaacaagagtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttagcgtccgggttaactttaataaataa 40822147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 36946478 - 36946532
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  36946478 aatttaggttaaaattagggcaacagttagcgtccgggttaactttaataaataa 36946532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 40822698 - 40822610
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||| |||||  || ||   |||||| |||||||||||||||||| ||| | | || ||||||||||||||||||    
T  40822698 ttaaacaggggtaatacaataaaagtaagcatagaatttatgttaaaattagggcaacagttaacgtctgagttaactttaataaataa 40822610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 53927128 - 53927216
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||| ||||| ||||||| |||||  || || | ||||||||||||||||||||||||| ||| |||  ||||||||||||| ||||||    
T  53927128 ttaaccagggataatacaataaaagtaagcatttaatttaggttaaaattagggcaacagttaacatcggggttaactttaaaaaataa 53927216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 55369630 - 55369550
Alignment:
Q  164 gggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |   |||||||||||||||||||    
T  55369630 gggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttagcgtccaggttaactttaataaataa 55369550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 55369785 - 55369705
Alignment:
Q  164 gggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |  || |||||||||||||||||    
T  55369785 gggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagcgtccggattaactttaataaataa 55369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 40822543 - 40822455
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||| |||||||| |||||  |  ||  ||||||||||| |||||||||||||| ||| | | |||||||||||||| ||||||    
T  40822543 ttaaacaggtgtaatacaataaaagtattcataaaatttaggtttaaattagggcaacagttaacgtctgggttaactttaagaaataa 40822455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 51654948 - 51654896
Alignment:
Q  192 tttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||| ||||    
T  51654948 tttaggttaaaattagggcaaaaataagctttcgggttaactttaatatataa 51654896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 53927424 - 53927512
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||  ||||  || ||  |||||||||||||||||| ||||||| ||||| |  ||| ||||||||||||||||    
T  53927424 ttaaacatgggtaatacaacaaaagtaagcataaaatttaggttaaaattaaggcaacagttagcgtccgggataactttaataaataa 53927512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 36946756 - 36946819
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattag 219  Q
    |||||||||||||||| |||||||  || ||   ||||||||||||||||||||||||| ||||    
T  36946756 ttaaacaggggtaatatagtaaaaataagcatataatttaggttaaaattagggcaacagttag 36946819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 40793631 - 40793682
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||  |||||||||||||||| || |||||||||||||| |||||    
T  40793631 ttaggttaaatctagggcaacaattagcgttcgggttaactttaatgaataa 40793682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 26949393 - 26949352
Alignment:
Q  233 tttaataaataaaagaagatttctgcaatttgatattttaaa 274  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||    
T  26949393 tttaaaaaaaaaaaggagatttctgcaatttgatattttaaa 26949352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 40817506 - 40817465
Alignment:
Q  233 tttaataaataaaagaagatttctgcaatttgatattttaaa 274  Q
    ||||| ||| |||| |||||||||||||||||||||||||||    
T  40817506 tttaaaaaaaaaaaaaagatttctgcaatttgatattttaaa 40817465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 51654885 - 51654833
Alignment:
Q  192 tttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||| ||| ||  || ||||||||||||||| ||||    
T  51654885 tttaggttaaaattagggcaaaaataagttttcgggttaactttaatatataa 51654833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 53927283 - 53927371
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| || |||||||||||||  || ||   |||||| |||||||||||||||| | ||| | |  ||||||||||||||||||||    
T  53927283 ttaaacatggttaatacagtaaaagtaagcatataatttatgttaaaattagggcaatagttaacgtccgggttaactttaataaataa 53927371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 30142572 - 30142458
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||  || ||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  30142572 ggagatttctgcaatttgatattttaaacaggg-taatacagtaaaagcaagcactaaagttaggttaaaattagggcaacaagtagcattcgggttaac 30142474  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  30142473 tttaataaataaaaga 30142458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 25000319 - 25000208
Alignment:
Q  134 gagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaact 233  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  || |  ||||||||||||||||||||||||||||||| | || |||||||||    
T  25000319 gagatttctgcaatttgatattttaaacaggggtaatacagtaaaaacaagctgtaaatttaggttaaaattagggcaacaattaaccttcgggttaact 25000220  T
Q  234 ttaataaataaa 245  Q
    ||||||||||||    
T  25000219 ttaataaataaa 25000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 440425 - 440309
Alignment:
Q  133 ggagatttatgcaatttgatattttaaa-caggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaa 231  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||  || |||| |||||||||||| ||||||||||||||||||||| | |||||    
T  440425 ggagatttctgcaatttgatattttaaaacaagggtaatacagtaaaatcaagcactgaatttaggttaagattagggcaacaattagcattcgagttaa 440326  T
Q  232 ctttaataaataaaaga 248  Q
    |||||||||||||||||    
T  440325 ctttaataaataaaaga 440309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 30142413 - 30142298
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||| |||||||||||||| |||||||||||||||  || || | ||||||||||||||||||||| ||||||||||||||||||||     
T  30142413 ggagatttctgcaattagatattttaaacagtggtaatacagtaaaagcaagcattgaatttaggttaaaattagggcgacaattagcatttgggttaat 30142314  T
Q  233 tttaataaataaaaga 248  Q
    ||||| ||||||||||    
T  30142313 tttaacaaataaaaga 30142298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 3589540 - 3589426
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || || | |||||| ||| |||||| |||||||||||||||  ||||||||    
T  3589540 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcattgaatttaagtt-aaattaaggcaacaattagcatccgggttaac 3589442  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  3589441 tttaataaataaaaga 3589426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 440984 - 440862
Alignment:
Q  1 ttaaaatgaaacacaaatagcaacaacaaagcatagaaacnnnnnnnnnn--tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaat 98  Q
    ||||| ||||||||||||||||||||||||||||||||||            |||||||||||||||||||||| ||||||||||| |||||||||| ||    
T  440984 ttaaagtgaaacacaaatagcaacaacaaagcatagaaacaaaacaaaaaaatatcaataagtaacaaagcatagaaacctaacctgaagcacctgcgat 440885  T
Q  99 ggatagattcagtatggaagaac 121  Q
    | |||||||| ||||||||||||    
T  440884 gaatagattcggtatggaagaac 440862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 21855417 - 21855505
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||| |||||  || ||  |||||||||||||||||| ||||||||||| | || ||||||||||||||||||||    
T  21855417 ttaaacaggggtaatacaataaaagtaagcataaaatttaggttaaaattatggcaacaattaacgttcgggttaactttaataaataa 21855505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 6399535 - 6399636
Alignment:
Q  142 tgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaa 241  Q
    |||||||||||||||||||||| || ||||||||||||  || ||||  | |||||||||||||||||||| | ||||||    ||||||||||||||||    
T  6399535 tgcaatttgatattttaaacagaggcaatacagtaaaagcaagcactgga-ttaggttaaaattagggcaaaagttagca----ggttaactttaataaa 6399629  T
Q  242 taaaaga 248  Q
    |||||||    
T  6399630 taaaaga 6399636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 26899663 - 26899750
Alignment:
Q  157 taaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| ||||||||||||||  || ||   |||||||| |||||||||||||||| |||||||  ||||||||||||||||||||    
T  26899663 taaacaggtgtaatacagtaaaagtaagcatagaatttaggctaaaattagggcaacagttagcatccgggttaactttaataaataa 26899750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 21854930 - 21855018
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| ||||||| |||||||  || ||   |||||||||||||||||||||||||| || |||  ||||||||||||||||||||    
T  21854930 ttaaacagcggtaatagagtaaaagtaagcatagaatttaggttaaaattagggcaacaaataacatccgggttaactttaataaataa 21855018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 26899808 - 26899896
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| |||| |||| |||||  || ||  ||||||||| |||||||||||||||| ||| | || ||||||||||||||||||||    
T  26899808 ttaaacagaggtagtacaataaaagtaagcataaaatttaggataaaattagggcaacacttaacgttcgggttaactttaataaataa 26899896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 4621178 - 4621123
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||||||  ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  4621178 ttaggttaaatctagggtaacaattagtattcgggttaactttaataaataaaaga 4621123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 21855539 - 21855596
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaac 213  Q
    |||||||| |||||||||||||||  || ||  |||||||||||||||||||||||||    
T  21855539 ttaaacagaggtaatacagtaaaagtaagcataaaatttaggttaaaattagggcaac 21855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 21854809 - 21854863
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| |||| |||||||||||||| |||||||   |||||||||||||||||||    
T  21854809 aatttgggtttaaattagggcaacagttagcatcctggttaactttaataaataa 21854863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 21855103 - 21855189
Alignment:
Q  158 aaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||  || ||   ||||||||||||||||| ||||| | ||| | |  ||||||||||||||||||||    
T  21855103 aaacaagggtaatacagtaaaagtaagcatagaatttaggttaaaattaaggcaatagttaacgtccgggttaactttaataaataa 21855189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 21855270 - 21855350
Alignment:
Q  164 gggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||  || ||   ||| ||||||||||||||||||| | |||||    ||||||||||||||||||||    
T  21855270 gggtaatacagtaaaagtaagcatataatgtaggttaaaattagggcaatagttagcgaccgggttaactttaataaataa 21855350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 25756942 - 25757044
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  25756942 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaagccaacactgaatttaggttaaaattaaggcaataattagcatttgggttaac 25757041  T
Q  233 ttt 235  Q
    |||    
T  25757042 ttt 25757044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 21267160 - 21267045
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||| ||||||||||||| || ||||||||    
T  21267160 ggagatttctgtaatttaatattttaaacaggggtaatacagtaaaagtaaatactgaatttaggttaaaattatggcaacaattagccttcgggttaac 21267061  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  21267060 tttaataaataaaaga 21267045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 32673131 - 32673017
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  32673131 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 32673033  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  32673032 tttaataaataaaaga 32673017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 38096512 - 38096611
Alignment:
Q  149 tgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    |||||||||||||||||||||||||||||||  || |||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38096512 tgatattttaaacaggggtaatacagtaaaagcaagcactgaatttatgttaaaattagggcaacaattagcattcgggttaactttgataaataaaaga 38096611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 25790859 - 25790757
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||  || |||| |||||||||||||||||||||||||||||| ||| || |||||    
T  25790859 ggagctttatgcaatttgatattttaaacaggggtaatacggtaaaagcaagcactgaatttaggttaaaattagggcaacaattagtattcggattaac 25790760  T
Q  233 ttt 235  Q
    |||    
T  25790759 ttt 25790757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21268031 - 21267909
Alignment:
Q  1 ttaaaatgaaacacaaatagcaacaacaaagcatagaaacnnnnnnnnnn--tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaat 98  Q
    ||||||||||||||| ||||||||||||||||||||||||            |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  21268031 ttaaaatgaaacacagatagcaacaacaaagcatagaaacaaaacaaaaaaatatcaataagtaacaaagcatagaaacctaacctgaagcacctgcaat 21267932  T
Q  99 ggatagattcagtatggaagaac 121  Q
    |||||||||| ||||||||||||    
T  21267931 ggatagattcggtatggaagaac 21267909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 17414346 - 17414434
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  17414346 ttaaacaggggtaatacagtaaaagtaaacatataatttaggttaaaattagggcaacagttagcgtctgggtcaactttaataaataa 17414434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 38096973 - 38097058
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaa 241  Q
    ||||||||||||||||||||||||  || ||  |||||||||||||||||||||||||| ||||| |  |||||||||||||||||    
T  38096973 ttaaacaggggtaatacagtaaaagtaagcataaaatttaggttaaaattagggcaacagttagcgtccgggttaactttaataaa 38097058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 21267726 - 21267655
Alignment:
Q  51 tatcaataagtaacaaagcataaaaacctaacctcaagcacctgcaatggatagattcagtatggaagaacg 122  Q
    |||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||||||| |||||||||||||    
T  21267726 tatcaatacgtaacaaagcatagaaaccaaacctgaagcacctgcgatggatagattcggtatggaagaacg 21267655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 17547733 - 17547821
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||    
T  17547733 ttaaataggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacaattagtgtccgggttaactttaataaataa 17547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 35393492 - 35393580
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| |||||||||| |||||  || ||   ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  35393492 ttaaacaagggtaatacaataaaagtaagcatataatttaggttaaaattagggcaacagttagcgtccgggttaactttaataaataa 35393580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 35393647 - 35393735
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |  ||||||| ||||||||||||    
T  35393647 ttaaataggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagcgtccgggttaaatttaataaataa 35393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 38096679 - 38096767
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||| |||||  || ||  |||||||||||||||||| ||||||| ||| | |  ||||||||||||||||||||    
T  38096679 ttaaacaggggtaatacattaaaagtaagcataaaatttaggttaaaattatggcaacagttaacgtccgggttaactttaataaataa 38096767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 41041789 - 41041877
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  41041789 ttaaacatgggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 41041877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 38096825 - 38096906
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaa 237  Q
    ||||||| ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  38096825 ttaaacatgggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttagcgtccgggttaactttaa 38096906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 32719297 - 32719209
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  |||||||||||||| |||||    
T  32719297 ttaaacatgggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttaacgtccgggttaactttaattaataa 32719209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 41041968 - 41042048
Alignment:
Q  164 gggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  41041968 gggtaatacagtaaaaataagcatataatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 41042048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 17547462 - 17547516
Alignment:
Q  190 aatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  17547462 aatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 17547516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 38097057 - 38097112
Alignment:
Q  189 aaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||||||||||| ||||| |  |  |||||||||||||||||    
T  38097057 aaatttaggttaaaattagggcaacagttagcgtccgatttaactttaataaataa 38097112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 35394126 - 35394213
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   |||||| ||||||||| || || || ||||| || ||||||||||||||||||||    
T  35394126 ttaaataggggtaatacagtaaaagtaagcatagaatttatgttaaaattcgg-caccagttagcgttcgggttaactttaataaataa 35394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 35394285 - 35394349
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagc 220  Q
    |||||||||  |||||||||||||  || ||   ||||||||||||||||||||||||| |||||    
T  35394285 ttaaacaggaataatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagc 35394349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 41042122 - 41042210
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| || ||||| |||||||  || ||  |||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||||    
T  41042122 ttaaacatggataatatagtaaaagtaagcataaaatttaggttaaaattaaggcaatagttaacatctagattaactttaataaataa 41042210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 40603609 - 40603495
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  40603609 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 40603511  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  40603510 tttaataaataaaaga 40603495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 13906141 - 13906031
Alignment:
Q  137 atttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaacttta 236  Q
    |||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||||||    
T  13906141 atttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaacttta 13906043  T
Q  237 ataaataaaaga 248  Q
    ||||||||||||    
T  13906042 ataaataaaaga 13906031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 26453774 - 26453660
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| ||| |||||| |||||||||||||||| ||||||||    
T  26453774 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagtt-aaattaaggcaacaattagcattcgggttaac 26453676  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  26453675 tttaataaataaaaga 26453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 38328196 - 38328108
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||||| |||  || ||   ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  38328196 ttaaacaggggtaatacagtgaaagtaagcatagaatttaggttaaaattagggcaacagttagcgtccgggttaactttaataaataa 38328108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 38329058 - 38328970
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  38329058 ttaaacaggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaataa 38328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 39087636 - 39087724
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | || ||||||||||||||||||||    
T  39087636 ttaaacatgggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttaacgttcgggttaactttaataaataa 39087724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 38328641 - 38328556
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaa 241  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||| | |  |||||||||||||||||    
T  38328641 ttaaacaggggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttaacgtccgggttaactttaataaa 38328556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 38328004 - 38327916
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||| ||||||  || ||   ||||||||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  38328004 ttaaacaagggtaatactgtaaaagtaagcatataatttaggttaaaattagggcaacaattaacgtccgggttaactttaataaataa 38327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 38328342 - 38328254
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || |||  ||||||||||||||||||||||||| ||| | |  ||||||||||||| ||||||    
T  38328342 ttaaacatgggtaatacagtaaaagtaagcacataatttaggttaaaattagggcaacagttaacgtccgggttaactttaacaaataa 38328254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 39087798 - 39087886
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   |||||| |||||||||| ||||||| |||   |  ||||||||||||||||||||    
T  39087798 ttaaataggggtaatacagtaaaagtaagcatagaatttatgttaaaattaaggcaacagttaatgtccgggttaactttaataaataa 39087886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 2047110 - 2047224
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  2047110 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaac 2047208  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  2047209 tttaataaataaaaga 2047224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 36461902 - 36461788
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||  || |||| |||||||||||||||||| |||||||||| |||| ||||||||    
T  36461902 ggagatttttgcaatttgatattttaaacaggg-taatacagtaaaagcaagcactgaatttaggttaaaattagagcaacaattaacattagggttaac 36461804  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  36461803 tttaataaataaaaga 36461788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 35596817 - 35596929
Alignment:
Q  134 gagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaact 233  Q
    ||||||| ||||||||||||||||||||| |||||||||| || ||  || |||| |||||| |||||| |||||||||||||||||||| |||||||||    
T  35596817 gagatttctgcaatttgatattttaaacatgggtaataca-tagaagcaagcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaact 35596914  T
Q  234 ttaataaataaaaga 248  Q
    |||||||||||||||    
T  35596915 ttaataaataaaaga 35596929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 35597873 - 35597974
Alignment:
Q  146 atttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaa 245  Q
    ||||||||||||||||| ||||||||||| | ||  || |||| |||||| |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  35597873 atttgatattttaaacatgggtaatacaggagaagcaatcactgaatttaagttaaa-ttagggcaacaattagcattcgggttaactttaataaataaa 35597971  T
Q  246 aga 248  Q
    |||    
T  35597972 aga 35597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 21055944 - 21055889
Alignment:
Q  193 ttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  21055944 ttaggttaaatctagggcaacaattagcattcgggttaactttaataaataaaaga 21055889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 8256277 - 8256237
Alignment:
Q  208 ggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8256277 ggcaacaattagcattcgggttaactttaataaataaaaga 8256237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 41662 - 41548
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| ||| ||||||| ||||||||||||||| ||||||||    
T  41662 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagcaagcactgaatttaagtt-aaattagtgcaacaattagcattcgggttaac 41564  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  41563 tttaataaataaaaga 41548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 14996340 - 14996454
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| |||||| || ||| |||||||||||||||||||| ||||||||    
T  14996340 ggagatttctgcaatttgatattttaaacatgggtaatacagtaaaagtaagcactgaatttaagtcaaa-ttagggcaacaattagcattcgggttaac 14996438  T
Q  233 tttaataaataaaaga 248  Q
    ||||||||||||||||    
T  14996439 tttaataaataaaaga 14996454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 35607119 - 35607023
Alignment:
Q  144 caatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaa 241  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||| | |||||| | |||||||||||||||||    
T  35607119 caatttgatattttaaacaggggcaatacagtaaaaacaaacactgaatttaggttaaaattagggcaaaagttagca-tcgggttaactttaataaa 35607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 23274496 - 23274383
Alignment:
Q  133 ggagatttatgcaatttgatattttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaac 232  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||  ||| ||| ||||||||||||||||||| |||||||||  ||   ||||||     
T  23274496 ggagatttctgcaatttgatattttaaataggggtaatacggtaaaagcaaatactgaatttaggttaaaattaggacaacaattataatacaggttaat 23274397  T
Q  233 tttaataaataaaa 246  Q
    ||||||||||||||    
T  23274396 tttaataaataaaa 23274383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 41843994 - 41844082
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| ||| | || ||||||||||||||||||||    
T  41843994 ttaaacagaggtaatacagtaaaagtaaacatagaatttaggttaaaattagggcaacagttaccgttcgggttaactttaataaataa 41844082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 41844193 - 41844285
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||| ||||||||||||||||  || ||   ||||||| ||||||||||||||||| ||||  | |||||||||||||||||||||||||    
T  41844193 ttaaacatgggtaatacagtaaaagtaagcatagaatttagattaaaattagggcaacagttagtgtatgggttaactttaataaataaaaga 41844285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 16913986 - 16914073
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||||| |||||  |  |||||||||||||||||||    
T  16913986 ttaaacaggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagc-gtccggttaactttaataaataa 16914073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 41843839 - 41843927
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||   ||||||||||||||||||||||||| ||||| |  ||||||| ||||||||||||    
T  41843839 ttaaataggggtaatacagtaaaagtaagcatataatttaggttaaaattagggcaacagttagcgtccgggttaattttaataaataa 41843927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 35607019 - 35606956
Alignment:
Q  182 aaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||| |||||||||||||||||| |||| | |||||||   |||||||||||||||||||||||    
T  35607019 aaacactgaatttaggttaaaattagagcaaaagttagcat---ggttaactttaataaataaaaga 35606956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 14994037 - 14994123
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaat 242  Q
    |||||||||||||||| |||||||  ||| |   |||||||||||| |||| ||||||| ||| | ||  |||||||||||||||||    
T  14994037 ttaaacaggggtaatatagtaaaagtaaatatataatttaggttaatattaaggcaacagttatcgttcaggttaactttaataaat 14994123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 13892 - 13977
Alignment:
Q  159 aacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||||||  || ||  |||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||    
T  13892 aacaggggtaatacagtaaaagtaagcataaaatttagtttaaaattagggcaacagttagcgtctgggttaactttaataaataa 13977  T

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Target: scaffold0090; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 13425 - 13513
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||| | ||||| | |||||||||||||||||||||    
T  13425 ttaaacaggggtaatacagtaaaagtaagcatagaatttaggttaaaattagggcaatagttagcgtctgggttaactttaataaataa 13513  T

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Target: scaffold0090; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 13587 - 13675
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||| ||||||||||||||||||  || ||  |||||||||||||||||| | ||||| ||||| |  ||||||||||||||||||||    
T  13587 ttaaataggggtaatacagtaaaagtaagcataaaatttaggttaaaattaagacaacagttagcgtccgggttaactttaataaataa 13675  T

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Target: scaffold0090; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 13735 - 13823
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||| |||||||||||||||  || ||  |||||||||||||||||||| ||||| ||||  |  ||||||||||||||||||||    
T  13735 ttaaacagaggtaatacagtaaaagtaagcataaaatttaggttaaaattaggacaacagttagtgtccgggttaactttaataaataa 13823  T

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Target: scaffold0246 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 9799 - 9891
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataaaaga 248  Q
    ||||||| || |||||||||||||  || ||   ||||||||||||||||||||||||| ||| | || ||| ||||||||||||||||||||    
T  9799 ttaaacacggctaatacagtaaaagtaagcatagaatttaggttaaaattagggcaacagttaactttcgggataactttaataaataaaaga 9891  T

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Target: scaffold0246; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 9644 - 9732
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaaatttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    |||||||||||||||||| |||||  || ||   ||||||||||||||||||| | ||| ||| | |  ||||||||||||||||||||    
T  9644 ttaaacaggggtaatacattaaaagtaagcatagaatttaggttaaaattaggactacagttaacgtccgggttaactttaataaataa 9732  T

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Target: scaffold0891 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 2077 - 2166
Alignment:
Q  156 ttaaacaggggtaatacagtaaaacaaaacactaa-atttaggttaaaattagggcaacaattagcatttgggttaactttaataaataa 244  Q
    ||||||| ||||||||||||||||  || || | | |||||||||||||||||||||||  ||||| | ||  |||||||||||||||||    
T  2077 ttaaacaagggtaatacagtaaaagtaagcattgagatttaggttaaaattagggcaacggttagcgtctgaattaactttaataaataa 2166  T

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