View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20062_low_17 (Length: 245)
Name: NF20062_low_17
Description: NF20062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20062_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 52086604 - 52086810
Alignment:
| Q |
9 |
acatcatcaatatttcactacataaatatttatggaattaacttgcttaagcacatgatgctaaaaagaagaatgaaaattttgaaatattacataattt |
108 |
Q |
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| T |
52086604 |
acatcatcaatatttcactacagaaatatttatggaattaacttgcttaagcacatgatgctaaaaagaagaatgaaaattttgaaatattacataattt |
52086703 |
T |
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| Q |
109 |
caacaagatgttaataaaaggaagtacacagtgcacgctgaaagtagctaaagtaccaaatcatgaatattgccactcaaccaatttaataaagatcaac |
208 |
Q |
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| T |
52086704 |
caacaagatattaataaaaggaagtacacagtgcacgctgaaagtagctaaagtaccaaatcatgaatattgccactcaaccaatttaataaagatcaac |
52086803 |
T |
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| Q |
209 |
caacata |
215 |
Q |
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||||||| |
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| T |
52086804 |
caacata |
52086810 |
T |
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