View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20063_low_5 (Length: 503)
Name: NF20063_low_5
Description: NF20063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20063_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 226 - 492
Target Start/End: Complemental strand, 35235586 - 35235320
Alignment:
| Q |
226 |
gaaagttagagaaagttacctatgaggaaaagtcaagtacttagtcataggaactctaataagattcctcctagcattaatagcagatttctgaacagca |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35235586 |
gaaagttagagaaagttacctatgaggaaaagtcaagtacttagtcataggaactctaataagattcctcctagcattaatagcagatttctgaacagca |
35235487 |
T |
|
| Q |
326 |
gaaacaacttccttagctttcccaacaccaacaccaactcgtccttgcttatcaccaacaacaacaatagccctaaacctcatttgtttccctcctttaa |
425 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35235486 |
gaaacaacttccttagctttcccaacaccaacaccaactcttccttgcttatcaccaacaacaacaatagccctaaacctcatttgtttccctcctttaa |
35235387 |
T |
|
| Q |
426 |
caaccttagtaaccctcctaacttgaacaactctttcttccaacccatctcttatcttttccttctt |
492 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35235386 |
caaccttagtaaccctcctaacttgaataactctttcttccaacccatctcttatcttttccttctt |
35235320 |
T |
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