View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20067_high_4 (Length: 303)

Name: NF20067_high_4
Description: NF20067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20067_high_4
NF20067_high_4
[»] chr5 (30 HSPs)
chr5 (1-243)||(23507600-23507842)
chr5 (1-243)||(21935398-21935640)
chr5 (1-243)||(24583126-24583368)
chr5 (50-246)||(20466358-20466554)
chr5 (239-293)||(21935684-21935738)
chr5 (239-293)||(23505062-23505116)
chr5 (239-293)||(23507502-23507556)
chr5 (239-289)||(24583032-24583082)
chr5 (65-237)||(21409074-21409246)
chr5 (92-219)||(23473185-23473312)
chr5 (90-247)||(24796696-24796853)
chr5 (47-171)||(20250540-20250664)
chr5 (92-243)||(29474374-29474525)
chr5 (101-247)||(21562334-21562480)
chr5 (92-237)||(26737028-26737173)
chr5 (92-243)||(22331188-22331339)
chr5 (92-243)||(37289797-37289948)
chr5 (101-243)||(17267644-17267786)
chr5 (90-247)||(14885290-14885447)
chr5 (74-243)||(27612288-27612457)
chr5 (101-181)||(20777891-20777971)
chr5 (92-243)||(14998040-14998191)
chr5 (92-243)||(40710714-40710865)
chr5 (101-243)||(20344198-20344340)
chr5 (107-221)||(25428389-25428503)
chr5 (90-243)||(21679077-21679230)
chr5 (90-243)||(22234219-22234372)
chr5 (101-177)||(20823435-20823511)
chr5 (110-234)||(22463876-22464000)
chr5 (101-177)||(22504661-22504737)
[»] chr1 (28 HSPs)
chr1 (1-246)||(20927068-20927313)
chr1 (1-243)||(20829492-20829734)
chr1 (1-246)||(41215956-41216201)
chr1 (1-166)||(20527147-20527312)
chr1 (20-234)||(21200998-21201212)
chr1 (2-108)||(22133857-22133963)
chr1 (239-293)||(20829778-20829832)
chr1 (1-63)||(35930925-35930987)
chr1 (90-247)||(31538186-31538343)
chr1 (90-247)||(37679093-37679250)
chr1 (90-247)||(48424917-48425074)
chr1 (90-247)||(52987785-52987942)
chr1 (92-243)||(21838967-21839118)
chr1 (90-243)||(21743741-21743894)
chr1 (92-243)||(20140100-20140251)
chr1 (48-243)||(21750957-21751152)
chr1 (92-243)||(24792807-24792958)
chr1 (92-243)||(33389220-33389371)
chr1 (50-243)||(50618547-50618740)
chr1 (92-243)||(430307-430458)
chr1 (92-243)||(17043206-17043357)
chr1 (257-288)||(22133961-22133992)
chr1 (92-243)||(51331684-51331835)
chr1 (92-181)||(16378174-16378263)
chr1 (101-234)||(20854960-20855093)
chr1 (244-285)||(41216247-41216288)
chr1 (160-212)||(20110905-20110957)
chr1 (101-177)||(21952992-21953068)
[»] scaffold0302 (4 HSPs)
scaffold0302 (1-243)||(244-486)
scaffold0302 (1-243)||(7186-7428)
scaffold0302 (239-293)||(146-200)
scaffold0302 (239-293)||(7088-7142)
[»] scaffold0225 (2 HSPs)
scaffold0225 (1-243)||(25427-25669)
scaffold0225 (239-293)||(25329-25383)
[»] scaffold0162 (4 HSPs)
scaffold0162 (1-243)||(14941-15183)
scaffold0162 (1-243)||(11205-11447)
scaffold0162 (239-293)||(14843-14897)
scaffold0162 (239-293)||(11491-11545)
[»] chr7 (50 HSPs)
chr7 (1-243)||(7825891-7826133)
chr7 (1-243)||(27105811-27106053)
chr7 (1-243)||(27172272-27172514)
chr7 (1-247)||(4441915-4442161)
chr7 (1-246)||(17925638-17925883)
chr7 (1-233)||(13458036-13458268)
chr7 (9-147)||(13378972-13379108)
chr7 (46-233)||(17143358-17143545)
chr7 (9-234)||(15716948-15717173)
chr7 (50-246)||(48813338-48813534)
chr7 (239-293)||(7825793-7825847)
chr7 (239-293)||(27106097-27106151)
chr7 (239-293)||(27172174-27172228)
chr7 (90-228)||(11386533-11386671)
chr7 (101-243)||(14139671-14139813)
chr7 (244-293)||(4441821-4441870)
chr7 (90-243)||(12204904-12205057)
chr7 (90-243)||(19149203-19149356)
chr7 (90-243)||(20748602-20748755)
chr7 (90-247)||(26092902-26093059)
chr7 (101-243)||(23503985-23504127)
chr7 (101-247)||(26116705-26116851)
chr7 (90-247)||(11301317-11301474)
chr7 (90-243)||(19614667-19614820)
chr7 (90-247)||(49154289-49154446)
chr7 (244-287)||(14938245-14938288)
chr7 (244-287)||(15365838-15365881)
chr7 (90-237)||(15626522-15626669)
chr7 (101-243)||(18052068-18052210)
chr7 (90-243)||(14262349-14262501)
chr7 (245-286)||(17925550-17925591)
chr7 (50-186)||(39232-39368)
chr7 (92-243)||(10872681-10872832)
chr7 (92-243)||(11235341-11235492)
chr7 (92-243)||(11551230-11551381)
chr7 (92-243)||(13688032-13688183)
chr7 (92-243)||(14041686-14041837)
chr7 (92-243)||(14334387-14334538)
chr7 (92-243)||(14351716-14351867)
chr7 (92-243)||(15159185-15159336)
chr7 (153-243)||(11770430-11770520)
chr7 (90-243)||(13675444-13675597)
chr7 (238-286)||(15717225-15717273)
chr7 (92-228)||(18588299-18588435)
chr7 (92-243)||(8709596-8709747)
chr7 (107-234)||(15122170-15122297)
chr7 (244-286)||(13457935-13457977)
chr7 (101-243)||(13966783-13966925)
chr7 (90-243)||(13023349-13023502)
chr7 (107-243)||(16070416-16070552)
[»] chr6 (43 HSPs)
chr6 (1-243)||(16380546-16380788)
chr6 (1-243)||(1646987-1647229)
chr6 (1-243)||(16648142-16648384)
chr6 (1-243)||(23998114-23998356)
chr6 (1-246)||(14130332-14130577)
chr6 (9-243)||(16099875-16100115)
chr6 (119-246)||(23026016-23026143)
chr6 (1-89)||(23025919-23026007)
chr6 (239-293)||(1647273-1647327)
chr6 (239-293)||(16380832-16380886)
chr6 (239-293)||(16648428-16648482)
chr6 (92-237)||(23080341-23080486)
chr6 (239-290)||(18577980-18578031)
chr6 (50-237)||(23085993-23086180)
chr6 (243-291)||(23998018-23998066)
chr6 (239-293)||(16234796-16234850)
chr6 (239-293)||(19985875-19985929)
chr6 (90-243)||(19881164-19881317)
chr6 (244-293)||(23026189-23026238)
chr6 (245-293)||(14130237-14130285)
chr6 (177-237)||(18836257-18836317)
chr6 (243-293)||(16099777-16099827)
chr6 (239-293)||(18836367-18836421)
chr6 (98-247)||(24366274-24366423)
chr6 (50-245)||(19487504-19487689)
chr6 (50-221)||(18406166-18406337)
chr6 (244-286)||(21928979-21929021)
chr6 (92-221)||(22760719-22760848)
chr6 (90-243)||(25769710-25769863)
chr6 (110-243)||(34643868-34644001)
chr6 (65-161)||(14643721-14643817)
chr6 (92-243)||(20634204-20634355)
chr6 (92-243)||(24294046-24294197)
chr6 (92-243)||(25608125-25608276)
chr6 (92-246)||(2873067-2873221)
chr6 (50-124)||(18963310-18963384)
chr6 (101-243)||(28281086-28281228)
chr6 (144-237)||(18196049-18196142)
chr6 (107-243)||(22435735-22435871)
chr6 (107-243)||(22444133-22444269)
chr6 (131-178)||(18450434-18450481)
chr6 (92-243)||(19866553-19866704)
chr6 (101-177)||(21473533-21473609)
[»] chr3 (46 HSPs)
chr3 (1-243)||(15611734-15611976)
chr3 (1-243)||(30139437-30139679)
chr3 (1-243)||(30148988-30149230)
chr3 (1-243)||(8272666-8272908)
chr3 (1-246)||(6151120-6151365)
chr3 (1-236)||(13965619-13965855)
chr3 (1-243)||(15948737-15948979)
chr3 (1-246)||(25767946-25768191)
chr3 (239-293)||(6151406-6151460)
chr3 (239-293)||(8272952-8273006)
chr3 (239-293)||(15611636-15611690)
chr3 (239-293)||(30139339-30139393)
chr3 (239-293)||(30148890-30148944)
chr3 (239-293)||(13965906-13965960)
chr3 (92-246)||(15261248-15261402)
chr3 (239-287)||(16258682-16258730)
chr3 (239-291)||(18915261-18915313)
chr3 (239-293)||(12795769-12795823)
chr3 (239-293)||(25767851-25767905)
chr3 (90-247)||(28755945-28756102)
chr3 (92-243)||(15723292-15723443)
chr3 (90-243)||(11950253-11950406)
chr3 (90-243)||(14088304-14088457)
chr3 (244-293)||(18751476-18751525)
chr3 (90-247)||(47125571-47125728)
chr3 (244-285)||(55514290-55514331)
chr3 (90-246)||(11889636-11889792)
chr3 (92-243)||(15587750-15587901)
chr3 (156-235)||(55498491-55498570)
chr3 (74-243)||(13254311-13254480)
chr3 (90-243)||(13970465-13970618)
chr3 (74-243)||(20060394-20060563)
chr3 (92-243)||(14874857-14875008)
chr3 (92-243)||(15340890-15341041)
chr3 (92-243)||(15346603-15346754)
chr3 (101-243)||(44778878-44779020)
chr3 (71-180)||(13318828-13318937)
chr3 (102-243)||(15229234-15229375)
chr3 (102-243)||(15235102-15235243)
chr3 (182-246)||(6710865-6710929)
chr3 (50-178)||(15014072-15014200)
chr3 (107-243)||(15400890-15401026)
chr3 (92-243)||(17491471-17491622)
chr3 (92-242)||(12499870-12500020)
chr3 (101-243)||(16379284-16379426)
chr3 (167-235)||(55498665-55498733)
[»] scaffold0022 (5 HSPs)
scaffold0022 (11-243)||(8867-9099)
scaffold0022 (239-293)||(9143-9197)
scaffold0022 (50-243)||(55788-55981)
scaffold0022 (50-243)||(40665-40858)
scaffold0022 (50-243)||(74385-74578)
[»] scaffold0266 (3 HSPs)
scaffold0266 (1-243)||(7892-8134)
scaffold0266 (239-293)||(8178-8232)
scaffold0266 (90-247)||(16141-16298)
[»] chr8 (44 HSPs)
chr8 (1-243)||(16875566-16875808)
chr8 (1-243)||(21848808-21849050)
chr8 (2-246)||(20650827-20651071)
chr8 (2-246)||(22436368-22436612)
chr8 (4-246)||(21195014-21195255)
chr8 (1-246)||(23155513-23155756)
chr8 (11-247)||(23902228-23902464)
chr8 (17-96)||(16414306-16414385)
chr8 (239-293)||(16875852-16875906)
chr8 (239-293)||(20651112-20651166)
chr8 (239-293)||(21849094-21849148)
chr8 (92-237)||(22376015-22376160)
chr8 (92-243)||(22422454-22422605)
chr8 (244-293)||(22436273-22436322)
chr8 (239-290)||(23155797-23155848)
chr8 (50-246)||(23887089-23887289)
chr8 (118-247)||(20390163-20390292)
chr8 (245-286)||(23902141-23902182)
chr8 (90-247)||(28982975-28983132)
chr8 (90-247)||(28988194-28988351)
chr8 (102-237)||(22988804-22988939)
chr8 (47-209)||(24631183-24631345)
chr8 (90-247)||(6605722-6605879)
chr8 (50-186)||(19869818-19869954)
chr8 (243-287)||(21195300-21195344)
chr8 (92-243)||(17672585-17672736)
chr8 (92-243)||(20016825-20016976)
chr8 (92-243)||(21253012-21253163)
chr8 (90-208)||(21927531-21927649)
chr8 (90-235)||(20008481-20008626)
chr8 (92-243)||(18858645-18858796)
chr8 (90-177)||(19861569-19861656)
chr8 (92-243)||(22118737-22118888)
chr8 (92-243)||(22127521-22127672)
chr8 (92-243)||(22131603-22131754)
chr8 (90-177)||(22373065-22373152)
chr8 (92-243)||(23652109-23652260)
chr8 (90-177)||(27356670-27356757)
chr8 (92-243)||(32602213-32602364)
chr8 (101-247)||(16269795-16269941)
chr8 (252-286)||(22317158-22317192)
chr8 (92-237)||(22246995-22247140)
chr8 (101-177)||(14567276-14567352)
chr8 (107-243)||(19980035-19980171)
[»] chr2 (30 HSPs)
chr2 (2-246)||(24568237-24568481)
chr2 (1-235)||(24829756-24829990)
chr2 (21-243)||(22279738-22279960)
chr2 (2-246)||(22760138-22760382)
chr2 (1-246)||(25130239-25130484)
chr2 (41-234)||(10037940-10038133)
chr2 (41-234)||(10098325-10098518)
chr2 (102-247)||(23112365-23112510)
chr2 (65-237)||(30010816-30010988)
chr2 (239-293)||(12639087-12639141)
chr2 (239-293)||(22279640-22279694)
chr2 (90-228)||(23098675-23098813)
chr2 (90-247)||(1065380-1065537)
chr2 (242-291)||(24830045-24830094)
chr2 (244-293)||(24568527-24568576)
chr2 (50-246)||(24818847-24819043)
chr2 (131-237)||(30209615-30209721)
chr2 (90-247)||(31832287-31832444)
chr2 (243-293)||(22760427-22760477)
chr2 (92-243)||(24711667-24711818)
chr2 (246-285)||(25130152-25130191)
chr2 (101-243)||(12575986-12576128)
chr2 (90-243)||(23278409-23278562)
chr2 (92-243)||(9337215-9337366)
chr2 (92-243)||(10870483-10870634)
chr2 (92-243)||(23106387-23106538)
chr2 (92-243)||(23189551-23189702)
chr2 (92-243)||(24264003-24264154)
chr2 (92-243)||(27219649-27219800)
chr2 (110-198)||(27208849-27208937)
[»] scaffold0170 (2 HSPs)
scaffold0170 (1-243)||(34118-34360)
scaffold0170 (243-293)||(34020-34070)
[»] scaffold0076 (3 HSPs)
scaffold0076 (1-243)||(42291-42533)
scaffold0076 (239-293)||(42193-42247)
scaffold0076 (90-243)||(31797-31950)
[»] scaffold0387 (2 HSPs)
scaffold0387 (2-246)||(16088-16332)
scaffold0387 (243-293)||(15993-16043)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-243)||(26297-26539)
scaffold0077 (239-293)||(26583-26637)
[»] chr4 (26 HSPs)
chr4 (1-243)||(15291186-15291428)
chr4 (20-247)||(12340912-12341139)
chr4 (101-247)||(8707909-8708055)
chr4 (239-291)||(15291472-15291524)
chr4 (239-293)||(14999219-14999273)
chr4 (50-237)||(14696121-14696308)
chr4 (239-293)||(9292739-9292793)
chr4 (92-246)||(14849225-14849379)
chr4 (101-247)||(44659994-44660140)
chr4 (90-247)||(3262911-3263068)
chr4 (90-243)||(15323219-15323372)
chr4 (47-209)||(8322850-8323012)
chr4 (90-243)||(15072361-15072514)
chr4 (92-243)||(14301838-14301989)
chr4 (92-243)||(40475042-40475193)
chr4 (90-243)||(15001482-15001635)
chr4 (90-247)||(29451654-29451811)
chr4 (50-186)||(18547696-18547832)
chr4 (92-243)||(8051482-8051633)
chr4 (92-243)||(15145744-15145895)
chr4 (92-243)||(23957749-23957900)
chr4 (92-243)||(27713338-27713489)
chr4 (54-148)||(14161567-14161661)
chr4 (90-209)||(1647394-1647513)
chr4 (92-243)||(17093008-17093159)
chr4 (101-177)||(11205360-11205436)
[»] scaffold0610 (2 HSPs)
scaffold0610 (1-246)||(6960-7205)
scaffold0610 (243-293)||(7250-7300)
[»] scaffold0218 (4 HSPs)
scaffold0218 (2-243)||(1984-2225)
scaffold0218 (9-232)||(26372-26594)
scaffold0218 (243-293)||(2273-2323)
scaffold0218 (244-286)||(26270-26312)
[»] scaffold0876 (3 HSPs)
scaffold0876 (1-246)||(977-1222)
scaffold0876 (246-293)||(1270-1317)
scaffold0876 (244-287)||(4475-4518)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-237)||(1652-1888)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-243)||(5837-6081)
scaffold0124 (239-293)||(6125-6179)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-245)||(24207-24451)
scaffold0120 (243-293)||(24111-24161)
scaffold0120 (92-243)||(8053-8204)
[»] scaffold1488 (2 HSPs)
scaffold1488 (1-243)||(834-1075)
scaffold1488 (243-293)||(1123-1173)
[»] scaffold0008 (6 HSPs)
scaffold0008 (1-243)||(132520-132762)
scaffold0008 (1-105)||(25938-26042)
scaffold0008 (160-246)||(25856-25942)
scaffold0008 (239-293)||(132806-132860)
scaffold0008 (243-293)||(25761-25811)
scaffold0008 (92-243)||(85352-85503)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-246)||(137-374)
[»] scaffold0021 (5 HSPs)
scaffold0021 (2-228)||(21879-22105)
scaffold0021 (2-228)||(31455-31681)
scaffold0021 (52-237)||(7253-7438)
scaffold0021 (244-293)||(31744-31793)
scaffold0021 (243-293)||(7149-7199)
[»] scaffold0692 (2 HSPs)
scaffold0692 (1-208)||(1915-2122)
scaffold0692 (244-293)||(2197-2246)
[»] scaffold0561 (2 HSPs)
scaffold0561 (2-215)||(7037-7250)
scaffold0561 (243-282)||(7322-7361)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-132)||(6888-7019)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-96)||(2119-2214)
[»] scaffold0635 (1 HSPs)
scaffold0635 (41-234)||(8937-9130)
[»] scaffold0083 (1 HSPs)
scaffold0083 (50-246)||(9114-9310)
[»] scaffold0004 (1 HSPs)
scaffold0004 (101-247)||(201599-201745)
[»] scaffold0244 (1 HSPs)
scaffold0244 (239-293)||(25094-25148)
[»] scaffold0016 (1 HSPs)
scaffold0016 (90-243)||(176464-176617)
[»] scaffold0647 (2 HSPs)
scaffold0647 (65-237)||(2938-3110)
scaffold0647 (92-243)||(7781-7932)
[»] scaffold0011 (2 HSPs)
scaffold0011 (92-243)||(24655-24806)
scaffold0011 (239-293)||(181859-181913)
[»] scaffold0719 (1 HSPs)
scaffold0719 (16-78)||(4785-4847)
[»] scaffold0585 (1 HSPs)
scaffold0585 (90-243)||(5209-5362)
[»] scaffold0001 (2 HSPs)
scaffold0001 (92-237)||(495057-495202)
scaffold0001 (50-243)||(453293-453486)
[»] scaffold0028 (2 HSPs)
scaffold0028 (241-293)||(104892-104944)
scaffold0028 (90-243)||(48634-48787)
[»] scaffold1486 (1 HSPs)
scaffold1486 (239-293)||(109-163)
[»] scaffold0269 (1 HSPs)
scaffold0269 (239-293)||(2199-2253)
[»] scaffold0058 (2 HSPs)
scaffold0058 (59-237)||(27337-27515)
scaffold0058 (128-215)||(76484-76571)
[»] scaffold0023 (3 HSPs)
scaffold0023 (239-293)||(54259-54313)
scaffold0023 (101-221)||(2636-2756)
scaffold0023 (107-243)||(151143-151279)
[»] scaffold1602 (1 HSPs)
scaffold1602 (50-243)||(147-340)
[»] scaffold0730 (1 HSPs)
scaffold0730 (90-243)||(121-274)
[»] scaffold0310 (1 HSPs)
scaffold0310 (244-293)||(13146-13195)
[»] scaffold0010 (2 HSPs)
scaffold0010 (90-247)||(40453-40610)
scaffold0010 (98-237)||(3953-4092)
[»] scaffold0445 (1 HSPs)
scaffold0445 (90-246)||(1969-2125)
[»] scaffold0018 (3 HSPs)
scaffold0018 (50-246)||(10821-11017)
scaffold0018 (50-246)||(17013-17209)
scaffold0018 (102-237)||(24430-24565)
[»] scaffold0509 (1 HSPs)
scaffold0509 (92-243)||(10861-11012)
[»] scaffold0138 (1 HSPs)
scaffold0138 (92-243)||(7209-7360)
[»] scaffold0040 (1 HSPs)
scaffold0040 (92-243)||(16910-17061)
[»] scaffold0017 (1 HSPs)
scaffold0017 (92-243)||(195609-195760)
[»] scaffold0006 (1 HSPs)
scaffold0006 (50-209)||(103300-103459)
[»] scaffold1208 (1 HSPs)
scaffold1208 (90-224)||(1809-1943)
[»] scaffold0335 (1 HSPs)
scaffold0335 (239-293)||(11027-11081)
[»] scaffold0102 (2 HSPs)
scaffold0102 (50-244)||(41728-41922)
scaffold0102 (244-285)||(46735-46776)
[»] scaffold0089 (1 HSPs)
scaffold0089 (101-247)||(14844-14990)
[»] scaffold0309 (2 HSPs)
scaffold0309 (92-221)||(16696-16825)
scaffold0309 (90-243)||(11826-11979)
[»] scaffold0282 (1 HSPs)
scaffold0282 (92-237)||(14601-14746)
[»] scaffold0012 (1 HSPs)
scaffold0012 (92-237)||(217542-217687)
[»] scaffold0540 (1 HSPs)
scaffold0540 (92-243)||(6453-6604)
[»] scaffold0454 (1 HSPs)
scaffold0454 (92-243)||(8971-9122)
[»] scaffold0379 (1 HSPs)
scaffold0379 (98-237)||(6017-6156)
[»] scaffold0080 (2 HSPs)
scaffold0080 (92-243)||(11361-11512)
scaffold0080 (107-243)||(50123-50259)
[»] scaffold1830 (1 HSPs)
scaffold1830 (101-243)||(1027-1169)
[»] scaffold0074 (1 HSPs)
scaffold0074 (59-237)||(5151-5328)
[»] scaffold0054 (1 HSPs)
scaffold0054 (101-243)||(64639-64781)
[»] scaffold0007 (1 HSPs)
scaffold0007 (107-237)||(84656-84786)
[»] scaffold0342 (1 HSPs)
scaffold0342 (92-237)||(15343-15488)
[»] scaffold0108 (1 HSPs)
scaffold0108 (90-243)||(49137-49290)
[»] scaffold0026 (1 HSPs)
scaffold0026 (90-243)||(50843-50996)
[»] scaffold0621 (1 HSPs)
scaffold0621 (49-221)||(3487-3659)
[»] scaffold0403 (1 HSPs)
scaffold0403 (107-243)||(8405-8541)
[»] scaffold0149 (2 HSPs)
scaffold0149 (107-243)||(5487-5623)
scaffold0149 (107-243)||(9918-10054)
[»] scaffold2004 (1 HSPs)
scaffold2004 (92-243)||(931-1082)
[»] scaffold0404 (1 HSPs)
scaffold0404 (152-243)||(6783-6874)
[»] scaffold0331 (1 HSPs)
scaffold0331 (50-181)||(16058-16189)
[»] scaffold0192 (1 HSPs)
scaffold0192 (50-177)||(28624-28751)
[»] scaffold0122 (1 HSPs)
scaffold0122 (92-243)||(38070-38221)
[»] scaffold0042 (1 HSPs)
scaffold0042 (98-237)||(22744-22883)
[»] scaffold0405 (1 HSPs)
scaffold0405 (71-209)||(567-705)
[»] scaffold0104 (1 HSPs)
scaffold0104 (90-240)||(24250-24400)
[»] scaffold0575 (1 HSPs)
scaffold0575 (50-243)||(3614-3807)
[»] scaffold0523 (1 HSPs)
scaffold0523 (102-243)||(1902-2043)
[»] scaffold0261 (2 HSPs)
scaffold0261 (90-243)||(13456-13609)
scaffold0261 (90-243)||(21635-21788)
[»] scaffold0130 (1 HSPs)
scaffold0130 (90-243)||(8928-9081)
[»] scaffold0049 (1 HSPs)
scaffold0049 (90-243)||(49995-50148)
[»] scaffold0029 (1 HSPs)
scaffold0029 (90-243)||(114592-114745)
[»] scaffold0319 (1 HSPs)
scaffold0319 (107-243)||(799-935)
[»] scaffold0084 (1 HSPs)
scaffold0084 (107-243)||(7254-7390)
[»] scaffold0062 (1 HSPs)
scaffold0062 (107-247)||(8920-9060)
[»] scaffold0312 (1 HSPs)
scaffold0312 (92-243)||(92-243)
[»] scaffold0270 (2 HSPs)
scaffold0270 (92-243)||(5904-6055)
scaffold0270 (92-243)||(13034-13185)
[»] scaffold0228 (1 HSPs)
scaffold0228 (48-243)||(20271-20466)
[»] scaffold0206 (1 HSPs)
scaffold0206 (155-234)||(25155-25234)
[»] scaffold0148 (1 HSPs)
scaffold0148 (107-246)||(1027-1166)
[»] scaffold0044 (1 HSPs)
scaffold0044 (92-243)||(2454-2605)
[»] scaffold0215 (1 HSPs)
scaffold0215 (93-243)||(28586-28736)
[»] scaffold0827 (1 HSPs)
scaffold0827 (50-123)||(5259-5332)
[»] scaffold0081 (2 HSPs)
scaffold0081 (92-237)||(20641-20786)
scaffold0081 (92-237)||(36065-36210)
[»] scaffold0079 (1 HSPs)
scaffold0079 (90-243)||(2749-2902)
[»] scaffold0037 (1 HSPs)
scaffold0037 (161-246)||(115172-115257)
[»] scaffold0034 (1 HSPs)
scaffold0034 (101-234)||(69412-69545)
[»] scaffold0908 (1 HSPs)
scaffold0908 (50-198)||(859-1007)
[»] scaffold0324 (1 HSPs)
scaffold0324 (107-243)||(13348-13484)
[»] scaffold0243 (1 HSPs)
scaffold0243 (107-243)||(25082-25218)


Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23507842 - 23507600
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507842 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 23507743  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23507742 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 23507643  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  23507642 aagagcatgctgagcatttgaggattgtgttgcaagtattgaa 23507600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 21935398 - 21935640
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935398 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 21935497  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  21935498 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 21935597  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  21935598 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 21935640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 24583368 - 24583126
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | |||||  |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24583368 gattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 24583269  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  24583268 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtttgagg 24583169  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| |||||| |||||||||||||| |||||    
T  24583168 aagagcatgctgagcatttgagaattgtgttgcaagtcttgaa 24583126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 20466358 - 20466554
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| ||||| ||  |||||||||| ||||| |||||| ||||||||||| | || |||||| | ||| | ||||    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | || ||||| ||| | || |||||||||||| | || || |||||||| ||||| |||||||||| ||||| |||||| ||||||||  |||||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaagga 20466554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 21935684 - 21935738
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935684 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 21935738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 23505116 - 23505062
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23505116 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtgg 23505062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 23507556 - 23507502
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23507556 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtgg 23507502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 24583082 - 24583032
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583082 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 24583032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 21409246 - 21409074
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgt 164  Q
    |||||||||||||| || || ||   |||||| ||||| || |||||||| || |||||| | || |||||| ||||||| ||||||||||| || ||||    
T  21409246 tattctgtgatgcctttcggtgttattaatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgt 21409147  T
Q  165 ttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||||||||||||| ||   || || ||||||||||| || ||||  |||| |||||| ||||| ||||||||    
T  21409146 ttatagatgatattctgaaatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagt 21409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 23473312 - 23473185
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| | |||||||||||||||| | || |||||| | | | |||||||||| ||||| ||||| || || ||||||||| |||| || |    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  192 agtctgaggaagagcatgttgagcgttt 219  Q
    ||||||| ||||| |||| |||||||||    
T  23473212 agtctgaagaagaacatgctgagcgttt 23473185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 24796696 - 24796853
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||| |  | |||||    
T  24796696 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatttattc 24796795  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  24796796 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 24796853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 20250540 - 20250664
Alignment:
Q  47 aggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctgg 146  Q
    ||||||||||| |||||||||| | | ||||||||||| ||| |||| |   |||||  ||||||||| || |||||||| || || ||||||||| |||    
T  20250540 aggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattttccatccttatttgg 20250639  T
Q  147 atcgttttgtggtggtgtttataga 171  Q
    |||  |||||||||||| |||||||    
T  20250640 atcaatttgtggtggtgcttataga 20250664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 29474374 - 29474525
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || |||||| | | | ||||||  |||||||| |||||||| |||||||||||| | || || |    
T  29474374 aatgcacctggagtgtttatggagtatatgaatcgcatctttcatgcatttttggatcagtttgtggttgtgtttatcgatgatattttgatttactcca 29474473  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  29474474 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 29474525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 21562334 - 21562480
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||||||||||||||| || ||| | ||| | ||| | ||||| || |||||||||||||| ||  || | ||||| ||| |||| |    
T  21562334 ggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattctaagactgaag 21562433  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    |||||||||  |||| ||| |  |||||||| ||||| |||||||||    
T  21562434 aagagcatgcagagcatttaaaaattgtgtttcaagtgttgaaggaa 21562480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 26737028 - 26737173
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| ||||| ||||||||||||||||||  ||| |||||| | | | | |||||||| ||||| ||||| || |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||| || ||||| |||| ||| | ||||| |||| | ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagt 26737173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 22331188 - 22331339
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  22331188 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 22331287  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  22331288 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 22331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 37289797 - 37289948
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  37289797 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 37289896  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  37289897 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 37289948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 17267644 - 17267786
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| | | |||||||   ||||||||||| ||||| ||||||||| || | ||||| ||| |||| |    
T  17267644 ggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattcaaagactgaag 17267743  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || |   |||| |||||||||||||| |||||    
T  17267744 aagagcatgcagaacacctgagaattgtgttgcaagtgttgaa 17267786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 14885290 - 14885447
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||||||||| ||||| |||||||| ||  | |||||    
T  14885290 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatatcttaatttattc 14885389  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| || || |  |||| | |||| || ||||||||||| |||||||||    
T  14885390 caagaatgaggaggaacacgcagagcatctgagaatagtgttgcaagtgttgaaggaa 14885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 27612457 - 27612288
Alignment:
Q  74 atgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatg 173  Q
    ||||| ||||||||  | |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || ||||| |||||||| || |    
T  27612457 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtggttgtgtttatcgacg 27612358  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||| | || || ||| |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  27612357 atattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 27612288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 20777971 - 20777891
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttg 181  Q
    ||||| || |||||||| |||||  |||| || ||| ||| |||||||   ||||||||||||||||||||||||||||||    
T  20777971 ggtgtattcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttatagatgatattttg 20777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 14998040 - 14998191
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  14998040 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 14998139  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| || || |||| ||||| | ||| |||||| |||||||| |||||    
T  14998140 agactgaagaggaacatgctgagcatctgaagattgttttgcaagtgttgaa 14998191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 40710865 - 40710714
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  40710865 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 40710766  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  40710765 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 40710714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 20344340 - 20344198
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | ||||| |||  ||| |    
T  20344340 ggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattccaagaatgaag 20344241  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    | |||||||  |||| | |||| ||||| |||||||| |||||    
T  20344240 aggagcatgcagagcatctgagaattgtcttgcaagttttgaa 20344198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 25428503 - 25428389
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||| || || ||||| || ||||| |||||||||||| | || || |||||||| ||||| |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  207 atgttgagcgtttga 221  Q
    ||| ||||| |||||    
T  25428403 atgctgagcatttga 25428389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 21679077 - 21679230
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| ||||||  ||| || |||   |||||||| || || || ||||| |||||| | |||||    
T  21679077 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattc 21679176  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | |  ||||||||| ||||||||||||||    
T  21679177 gagaactgaggaagagcatgcagaacatccgaggattgtattgcaagtattgaa 21679230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 22234219 - 22234372
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||| ||||||| ||||| | ||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  22234219 ctaatgcgcctggtgtgtttgtggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 22234318  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  || | | ||| |||||| |||||||| |||||    
T  22234319 taagactgaagaagagcatgcagatcatctgaagattgtattgcaagtgttgaa 22234372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 20823511 - 20823435
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| || |||||||| |||||  |||| || ||| ||| |||||||   ||||||||||||||||||||||||||    
T  20823511 ggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttatagatgatat 20823435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 22464000 - 22463876
Alignment:
Q  110 atggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||||||| |||||  |||| || ||| ||| |||||||   ||||||||||| |||||||||||||||||| | ||||| ||  |||| || |||||||    
T  22464000 atggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatg 22463901  T
Q  210 ttgagcgtttgaggattgtgttgca 234  Q
      || |  |||| ||||||||||||    
T  22463900 cagaacacttgaagattgtgttgca 22463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 22504737 - 22504661
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||    
T  22504737 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatat 22504661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20927313 - 20927068
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20927313 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 20927214  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20927213 ggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 20927114  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  20927113 aagagcatgatgagcatttgaggattgtgttgcaagtcttgaagga 20927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 20829492 - 20829734
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829492 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 20829591  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  20829592 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 20829691  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  20829692 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 20829734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 41215956 - 41216201
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| |||||| | |||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||    
T  41215956 gattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaatgcgcca 41216055  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || ||| | || |||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  41216056 ggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaagtctgagg 41216155  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| ||||||||||||||||| ||| ||||||||    
T  41216156 aggagcatgctgagcatttgaggattgtgttgcgagtcttgaagga 41216201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 20527312 - 20527147
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||| ||||||| |||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527312 gattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 20527213  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgttt 166  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20527212 ggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 21200998 - 21201212
Alignment:
Q  20 gatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtaca 119  Q
    |||||||||||||| | |||||||| ||| ||||| |||||||| |||||||||||||||||| | ||  ||||| | ||  ||||||| ||||| || |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  120 tgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgttt 219  Q
    |||||||||||||||||||||||||| |  | ||||||| ||  |||||||||||||| ||||||||||||||||  ||||| ||||||||| ||| | |    
T  21201098 tgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatct 21201197  T
Q  220 gaggattgtgttgca 234  Q
    |||||||||||||||    
T  21201198 gaggattgtgttgca 21201212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| | |||||||||||||||||||| |||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  102 gtgtctt 108  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 20829778 - 20829832
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829778 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 20829832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35930925 - 35930987
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatga 63  Q
    ||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  35930925 gattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

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Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 31538186 - 31538343
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 31538343  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 37679250 - 37679093
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||| |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  ||||||  ||||||  |||| | |||| ||||| |||||||| |||||||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 37679093  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 48425074 - 48424917
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 48424917  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 52987942 - 52987785
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 52987785  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 21839118 - 21838967
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || |    
T  21839118 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactcca 21839019  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  21839018 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 21838967  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 21743741 - 21743894
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||| ||| | || ||  | |||||    
T  21743741 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatcacatcttaatttattc 21743840  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | ||| |||||| |||||||| |||||    
T  21743841 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaa 21743894  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 20140251 - 20140100
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||||||| |||| || || || |||||||||||| | || || |    
T  20140251 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcgttttttggttgttttcattgatgatattttgatttactcca 20140152  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||| |  |||| |||||| |||||||| |||||    
T  20140151 agactgaagaagaacatgctgatcacttgaagattgttttgcaagtgttgaa 20140100  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 243
Target Start/End: Complemental strand, 21751152 - 21750957
Alignment:
Q  48 ggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctgga 147  Q
    |||||||||| |||||||||   || ||||| ||||| ||  ||||||| |  || || |||||||||||||||||| | || |||||| | | | ||||    
T  21751152 ggtatggacattatgagtataaagttatgccttttggtgttactaatgctcttggagtatttatggagtacatgaatcgcatctttcatgcatttttgga 21751053  T
Q  148 tcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||| ||||| || || || |||||||||||  | || || |||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  21751052 tcgtttcgtggttgttttcattgatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaa 21750957  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 24792807 - 24792958
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || ||||| || ||||| |||||||||||| | || || |    
T  24792807 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactcca 24792906  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||||||||| | ||| |||||| |||||||| |||||    
T  24792907 agactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaa 24792958  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 33389220 - 33389371
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  33389220 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 33389319  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  33389320 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 33389371  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 50618547 - 50618740
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || ||||||||||||||||||   || |||||| | | | | ||||    
T  50618547 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcccctggagtgtttatggagtacatgaatcacatttttcatgcattttttgatc 50618646  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| ||||| || || || ||||| |||||| | || || ||| |||||||||| |||||||||| ||||| || ||| |||||||| |||||    
T  50618647 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaa 50618740  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 430307 - 430458
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||| | | || |||||| | | | ||||||| || ||||| || || || |||||||||||| | || || |    
T  430307 aatgcacctggagtatttatggagtacatgattcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatattttgatttactcca 430406  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  430407 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 430458  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 17043206 - 17043357
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || || || |||||||| |||||||||||| | || || |    
T  17043206 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcctttttggatcggttcgttgttgtgtttatcgatgatattttgatttactcca 17043305  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || || | ||||| |||| ||||| | ||| |||||| ||||||||||||||    
T  17043306 agactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaa 17043357  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 288
Target Start/End: Original strand, 22133961 - 22133992
Alignment:
Q  257 cttggtcatgtgatttctaagggtggtatttc 288  Q
    ||||||||||||||||||||||||||||||||    
T  22133961 cttggtcatgtgatttctaagggtggtatttc 22133992  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 51331684 - 51331835
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  51331684 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 51331783  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| ||||  |||| | ||| |||||| |||||||| |||||    
T  51331784 agactgaagaagaacatgcggagcatctgaagattgttttgcaagtgttgaa 51331835  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 16378263 - 16378174
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttg 181  Q
    ||||| || ||||| || ||||||||||||||| |||| ||||||   | | |||||||||| ||||| |||||||| ||||| ||||||    
T  16378263 aatgcgcctggtgtgttcatggagtacatgaatcgaatttttcatgtgtttttggatcgtttcgtggttgtgtttattgatgacattttg 16378174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 20854960 - 20855093
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||  |||| || ||| ||| |||||||   ||||||||||| |||||||||||||||||| | ||||| ||  |||| |    
T  20854960 ggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatattttgatttattctaaaactgaag 20855059  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgca 234  Q
    | |||||||  || |  |||| ||||||||||||    
T  20855060 aggagcatgcagaacacttgaagattgtgttgca 20855093  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 41216247 - 41216288
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtat 285  Q
    |||||||||||||||| ||||| |||||||||||||| ||||    
T  41216247 ggaagtgagtttccttagtcatatgatttctaagggtagtat 41216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 20110957 - 20110905
Alignment:
Q  160 ggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttg 212  Q
    |||||||||||||||| | ||||||||||||||||| ||  | ||||||||||    
T  20110957 ggtgtttatagatgatgtattggtgtattcgaagtcagacaaggagcatgttg 20110905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 21953068 - 21952992
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||    
T  21953068 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatat 21952992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 486 - 244
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  486 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgcca 387  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  386 ggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 287  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  286 aagagcatgctgagcatttgaggattgtgttgcaagttttgaa 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 7428 - 7186
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  7428 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgcca 7329  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7328 ggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 7229  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  7228 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 200 - 146
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  200 ttgaaggaagtgagtttccttggtcatttgatttctaagggtggtatttatgtgg 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 7142 - 7088
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7142 ttgaaggaagtgagtttccttggtcatttgatttctaagggtggtatttatgtgg 7088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 25669 - 25427
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25669 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 25570  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  25569 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 25470  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  25469 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 25427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 25383 - 25329
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25383 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 25329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 15183 - 14941
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15183 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 15084  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15083 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 14984  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  14983 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 14941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11205 - 11447
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| |||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||| |||||||||||||||| |||||||| |||    
T  11205 gattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaatgcgcca 11304  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11305 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 11404  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||  ||||| ||||||||||||||||||||| |||||    
T  11405 aagagcataatgagcatttgaggattgtgttgcaagtcttgaa 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 14897 - 14843
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14897 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 14843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 11491 - 11545
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11491 ttgaaggaagtgagtttccttggtcaagtgatttctaagggtggtatttctgtgg 11545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 7826133 - 7825891
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826133 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 7826034  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  7826033 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 7825934  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  7825933 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 7825891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 27105811 - 27106053
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105811 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 27105910  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  27105911 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 27106010  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  27106011 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 27106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 27172514 - 27172272
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172514 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 27172415  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  27172414 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 27172315  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  27172314 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 27172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 4442161 - 4441915
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| ||||||   |||||||| |||||| |||||||||||||||||||| |||||||| ||||| |||    
T  4442161 gattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaatgcgcca 4442062  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || ||||||| |||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4442061 ggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgggg 4441962  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    | |||||||| |||| ||||||||| ||||||| ||| |||||||||    
T  4441961 aggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaa 4441915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17925883 - 17925638
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  17925883 gattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 17925784  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||| ||||| ||||||  ||    
T  17925783 ggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaagtctaggg 17925684  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | |||||||||| || ||| || ||||||||||  || ||||||||    
T  17925683 aggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaagga 17925638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13458268 - 13458036
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||    
T  13458268 gattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgcca 13458169  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  13458168 ggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgaggtcagagg 13458069  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgc 233  Q
    | ||| ||| ||||| |||||||||||||||||    
T  13458068 aggagtatgctgagcatttgaggattgtgttgc 13458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 13379108 - 13378972
Alignment:
Q  9 tgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctt 108  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  13379108 tgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaatgcgccaggtgtctt 13379011  T
Q  109 tatggagtacatgaatagaatatttcatccttatctgga 147  Q
     ||| | || |||||||||||||||||||||||||||||    
T  13379010 catgaaatatatgaatagaatatttcatccttatctgga 13378972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 46 - 233
Target Start/End: Original strand, 17143358 - 17143545
Alignment:
Q  46 gaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctg 145  Q
    |||||||||||||||||| ||||||| |||| ||||||| ||  ||||| | || |||||||| ||||| || ||||||||||| || ||||||||| ||    
T  17143358 gaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatccttatttg 17143457  T
Q  146 gatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgc 233  Q
    ||||  |||||||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||  |||| | |||||||||||||||    
T  17143458 gatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgc 17143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 15716948 - 15717173
Alignment:
Q  9 tgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctt 108  Q
    |||||||||| |||||||||||||| | ||||||||  || ||||| |||||||| |||||||| |||||||||||  || ||||||  ||  |||||||    
T  15716948 tgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtctt 15717047  T
Q  109 tatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcat 208  Q
     ||||| || |||||||||||||| ||||||| |||||| |  ||| |||| ||||||||||| ||||| ||||| ||||| | ||| ||||| ||||||    
T  15717048 catggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagcat 15717147  T
Q  209 gttgagcgtttgaggattgtgttgca 234  Q
    | ||| | ||| ||||  ||||||||    
T  15717148 gctgaacattttaggaccgtgttgca 15717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 48813338 - 48813534
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||| ||| |||| |||||||||||||||||| | || |||||| ||||| | ||||    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatc 48813437  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | || ||||| ||||| || |||||||||||| | || || |||||||| ||||| |||| ||||| ||||| |||||||||||||||  |||||||    
T  48813438 gcttcgtggttgtgttcattgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaagga 48813534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 7825847 - 7825793
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7825847 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 7825793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 27106097 - 27106151
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27106097 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 27106151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 27172228 - 27172174
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172228 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 27172174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 11386533 - 11386671
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| |||||||| ||||||||||| | ||| ||||| |||||| ||| ||||||| | || |||||||||||||| |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgt 228  Q
     ||| |||| ||||||||||  |||| | ||||||||||    
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgt 11386671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 14139813 - 14139671
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| |||||||   || |||||||| ||||| |||||||||||| | ||||| ||| |||| |    
T  14139813 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattctaagactgaag 14139714  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| ||||||||||||||||||||    
T  14139713 aagagcatgcagaacatctgagaattgtgttgcaagtattgaa 14139671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 4441870 - 4441821
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4441870 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttccgtgg 4441821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 12204904 - 12205057
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||||||||||||||| || ||| |||||||||||   | |||||| |||||||| |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | |||  |||||||||||||| |||||    
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaa 12205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 19149356 - 19149203
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||| |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | ||| ||||||||||||||| |||||    
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 19149203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 20748755 - 20748602
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | ||| ||||||||||||||| |||||    
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 20748602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 26092902 - 26093059
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 26093059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 23503985 - 23504127
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| |||||||   || |||||||| ||||| ||||||||| || | ||||||||| |||| |    
T  23503985 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaagactgaag 23504084  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| |||||||||||||| |||||    
T  23504085 aagagcatgcagaacatctgagaattgtgttgcaagttttgaa 23504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 26116705 - 26116851
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||| |||| || ||| ||| |||||||   ||| | ||||||||||| || ||||||||  | ||||| |||  |||||    
T  26116705 ggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattccaagaatgagg 26116804  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    | |||||||  |||| | |||| |||||||||||||| |||||||||    
T  26116805 aggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaa 26116851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 11301317 - 11301474
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | |||||    
T  11301317 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 11301416  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  11301417 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 11301474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 19614820 - 19614667
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | |||||||||| ||||||||||||||    
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaa 19614667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 49154446 - 49154289
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||| |||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 49154289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 14938288 - 14938245
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtattt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14938288 ggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 14938245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 15365881 - 15365838
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtattt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  15365881 ggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 15365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 15626669 - 15626522
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    |||||||||||||||| |||||||||||||||||  | || |||||| ||||| | ||||| || ||||| | ||| || |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
     |||||||| ||||| ||||| |||  ||||| |||||| ||||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagt 15626522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 18052068 - 18052210
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| |||||||   || |||||||| ||||| ||||| ||| || | ||||||||| |||| |    
T  18052068 ggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaagactgaag 18052167  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| |||||||||||||| |||||    
T  18052168 aagagcatgcagaacatctgagaattgtgttgcaagttttgaa 18052210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 14262349 - 14262501
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||||||||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 14262448  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
      || |||| ||||||||||  |||| | ||| |||| |||||||||| |||||    
T  14262449 -tagactgaagaagagcatgcagagcatctgaagattatgttgcaagtgttgaa 14262501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 17925591 - 17925550
Alignment:
Q  245 gaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  17925591 gaagtgagtttccttggtcatgtgatttcgaagggtggtatt 17925550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 39232 - 39368
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    ||||| || ||||||||||| |||||||| |||||||| || || || ||||| || ||||||||||| ||||| ||||| || ||||| ||| | ||||    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatccatatttagatc 39331  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgta 186  Q
      || || || || || || |||||||||||||||||    
T  39332 agttcgttgtagtattcattgatgatattttggtgta 39368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 10872832 - 10872681
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | ||||||||| |||||||| |||||||| || ||||||||| | || || |    
T  10872832 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggtcgtgtttatcgacgatattttgatctactcca 10872733  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  10872732 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 10872681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 11235341 - 11235492
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  11235341 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 11235440  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  11235441 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 11235492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 11551230 - 11551381
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || || || ||||| || |||||||||||| | ||||| |    
T  11551230 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtagttgtgttcatcgatgatattttgatttattcca 11551329  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||||||||| | ||| |||||| |||||||| |||||    
T  11551330 agactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaa 11551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 13688183 - 13688032
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  13688183 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 13688084  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  13688083 agactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 13688032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 14041837 - 14041686
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| | ||| ||||||||||||||||||   || |||||| | | | |||||||||| || ||  | || || |||||||||||| | || || |    
T  14041837 aatgcacctgatgtgtttatggagtacatgaatcacatttttcatgcatttttggatcgtttcgtagttattttcattgatgatattttgatttactcca 14041738  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||||||||| |||| ||||| ||||| |||||| |||||||| |||||    
T  14041737 agactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaa 14041686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 14334538 - 14334387
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  14334538 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 14334439  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  14334438 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 14334387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 14351867 - 14351716
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| | ||| ||||||||||||||||||   || |||||| | | | |||||||||| || ||  | || || |||||||||||| | || || |    
T  14351867 aatgcacctgatgtgtttatggagtacatgaatcacatttttcatgcatttttggatcgtttcgtagttattttcattgatgatattttgatttactcca 14351768  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||||||||| |||| ||||| ||||| |||||| |||||||| |||||    
T  14351767 agactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaa 14351716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 15159185 - 15159336
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  15159185 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 15159284  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  15159285 agactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 15159336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 11770430 - 11770520
Alignment:
Q  153 ttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| || |||||||||||| | || || |||||||||| ||| |||| ||||| ||||| |||||| |||||||| |||||    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaa 11770520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 13675597 - 13675444
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| |||||  |||| || ||| |||| ||||||   |||||||| || ||||| ||||| ||| || | |||||    
T  13675597 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattc 13675498  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | ||| |||||| ||||||||||||||    
T  13675497 aaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaa 13675444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 15717225 - 15717273
Alignment:
Q  238 attgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    |||| ||||||||||||| ||||||||||||||||| ||||| ||||||    
T  15717225 attgcaggaagtgagttttcttggtcatgtgatttcaaagggcggtatt 15717273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 228
Target Start/End: Original strand, 18588299 - 18588435
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  18588299 aatgcacctggagtgtttatggagtatatgaattgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 18588398  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgt 228  Q
    || |||| ||||| |||| ||||| ||||| ||||||    
T  18588399 agactgaagaagaacatgctgagcatttgaagattgt 18588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 8709747 - 8709596
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| ||| |||| |||||||| || ||||||||| | || || |    
T  8709747 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttatggttgtgtttatcgacgatattttgatttactcca 8709648  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  8709647 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 8709596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 15122170 - 15122297
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||| ||||||||||| || |||| || |||| |||||   |||||||| ||||| ||| | ||||| ||||||||||| ||||  ||||| ||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  207 atgttgagcgtttgaggattgtgttgca 234  Q
     ||  |||| | |||| |||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgca 15122297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 13457977 - 13457935
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    ||||||||||||||||| |||||||||||| |||| |||||||    
T  13457977 ggaagtgagtttccttgatcatgtgatttcgaaggatggtatt 13457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 13966783 - 13966925
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | ||||| |||  ||| |    
T  13966783 ggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattccaagaatgaag 13966882  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    | |||||||  |||| | |||| ||||| |||||||| |||||    
T  13966883 aggagcatgcagagcatctgagaattgtcttgcaagttttgaa 13966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 13023502 - 13023349
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||| | || |||||  |||| || ||| ||| |||||||   ||||||||||||||||| ||||||| |||| | |||||    
T  13023502 ctaatgcgcctggtgtttttatgtattatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttattgatgataatttgatttattc 13023403  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| || |||||||  || | | |||| ||||| |||||||| |||||    
T  13023402 taagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaa 13023349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 16070416 - 16070552
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| ||||| ||||| || |||   |||||||||   |||||||| |||||||| ||||||||| |  | ||||| ||| |||| |||||||    
T  16070416 tttatggagtatatgaacagaattttccatgtctatctggataaatttgtggttgtgtttattgatgatattctcatttattctaagactgaagaagagc 16070515  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||  |||  | ||| |||||| |||||||| |||||    
T  16070516 atgcagagtatctgaagattgtattgcaagtgttgaa 16070552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16380546 - 16380788
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380546 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 16380645  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16380646 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16380745  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  16380746 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 16380788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 1646987 - 1647229
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1646987 gattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 1647086  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  1647087 ggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaagtttgagg 1647186  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  1647187 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 1647229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16648142 - 16648384
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16648142 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 16648241  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16648242 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16648341  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  16648342 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 16648384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23998356 - 23998114
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23998356 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 23998257  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||| ||||    
T  23998256 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaagtccgagg 23998157  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||| | |||||||||||||||| |||| |||||    
T  23998156 aagagcatgctgaacatttgaggattgtgttgtaagtcttgaa 23998114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14130577 - 14130332
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||| ||||||| |||||||| |||| ||||  | |    
T  14130577 gattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaatgtgcta 14130478  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14130477 ggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaagtttgagg 14130378  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| ||||||||||||||| | ||| ||||||||    
T  14130377 aggagcatgctgagcatttgaggattgtgttacgagtcttgaagga 14130332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 16100115 - 16099875
Alignment:
Q  9 tgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctt 108  Q
    |||||||||||||||||||||||||   ||| |||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||  |||||||||||    
T  16100115 tgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaatgtgccaggtgtctt 16100016  T
Q  109 tat------ggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaa 202  Q
    |||      |||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  16100015 tatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtattcgaagtctaaggag 16099916  T
Q  203 gagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||| | ||||| ||| ||||||||||||||||| |||||    
T  16099915 gagcacgctgagcatttaaggattgtgttgcaagtcttgaa 16099875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 23026016 - 23026143
Alignment:
Q  119 atgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtt 218  Q
    |||||||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |  || ||    
T  23026016 atgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgaggaggagcatgcttcgcatt 23026115  T
Q  219 tgaggattgtgttgcaagtattgaagga 246  Q
    ||||||||||||||| ||| ||||||||    
T  23026116 tgaggattgtgttgcgagtcttgaagga 23026143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23025919 - 23026007
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtat 89  Q
    ||||||| |||||||||||||||||||||||||   ||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23025919 gattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 1647273 - 1647327
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647273 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 16380832 - 16380886
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380832 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 16380886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 16648428 - 16648482
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648428 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 16648482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 23080486 - 23080341
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | ||| |||||||| ||||| ||||| || |||||||||||| | || || |    
T  23080486 aatgcacctggagtgtttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 23080387  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||||||||||||| |||| ||||| ||||| |||||| ||||||||    
T  23080386 agtctgaggaagaacatgctgagcatttgaagattgttttgcaagt 23080341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 18578031 - 18577980
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18578031 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 18577980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 237
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| ||||| ||||| |||||||| || || ||  | ||||| || ||||| |||||||||||||||||| | || |||||| | ||| ||||||    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | || ||||| ||||| || |||||||||||| | || || |||| ||| ||||| |||| ||||| ||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 23998066 - 23998018
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998066 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 23998018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 16234850 - 16234796
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  16234850 ttgaaggaagggagtttcctgggtcatgtgatttctaagggtggtatttctgtgg 16234796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 19985875 - 19985929
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  19985875 ttgaaggaagcgagttttcttggtcatgtgatttctaagggtggtatttctgtgg 19985929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 19881317 - 19881164
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| |||||||| || |||||| |||| ||||||   |||||||| ||||| || ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | |||||||||| ||||||||||||||    
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaa 19881164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 23026189 - 23026238
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23026189 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttccgtgg 23026238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 14130285 - 14130237
Alignment:
Q  245 gaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14130285 gaagtgagtttccttggtcatgtgatttctaaaggtggtatttctgtgg 14130237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 18836257 - 18836317
Alignment:
Q  177 ttttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||||||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 18836317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 16099827 - 16099777
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16099827 aggaagtgaatttccttggtcatgtgatttctaagggtggtatttatgtgg 16099777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 18836367 - 18836421
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  18836367 ttgaagggagtgagcttccttggtcacgtgatttctaagggtggtatttctgtgg 18836421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 247
Target Start/End: Complemental strand, 24366423 - 24366274
Alignment:
Q  98 ccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctg 197  Q
    |||||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | ||||| |||  ||    
T  24366423 ccaggtgtatttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattccaagaatg 24366324  T
Q  198 aggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    |||| |||||||  ||||   |||| ||||| |||||||| |||||||||    
T  24366323 aggaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaa 24366274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 19487504 - 19487689
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||| || ||||| |||||||||||||||||||          | ||||| ||||||    
T  19487504 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggagtacatgaata----------tgcttatttggatc 19487593  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagg 245  Q
    | |||||||| || ||||| ||||| || ||| | ||||| |||||||| ||||||||||  |||| ||| | ||||||||||||||| |||||||    
T  19487594 ggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaagg 19487689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 18406166 - 18406337
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||    
T  18406166 tatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 18406265  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttga 221  Q
    |||||||||| || || || |||||||||||| | || || ||| |||| ||||| |||| ||||| |||||    
T  18406266 gttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttga 18406337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 21929021 - 21928979
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  21929021 ggaagggagtttccttggtcatgtgatttctaagggtggtatt 21928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 221
Target Start/End: Original strand, 22760719 - 22760848
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || |||||  ||||||||||| | || || |    
T  22760719 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattaatgatattttgatttactcca 22760818  T
Q  192 agtctgaggaagagcatgttgagcgtttga 221  Q
    ||||||| |||||||||| ||||| |||||    
T  22760819 agtctgaagaagagcatgctgagcatttga 22760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 25769863 - 25769710
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||| |||||| ||||   |||||||| |||||||| ||||||||  |  | |||||    
T  25769863 ctaatgcgcctggtgtatttatggagtatatgaaccgaattttccatgcttatccggataaatttgtggttgtgtttattgatgatatcctaatttattc 25769764  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||| ||| ||||||||||  |||| | ||| ||||||||||||||| |||||    
T  25769763 taagtatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 25769710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 34643868 - 34644001
Alignment:
Q  110 atggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||||||| ||||||||||| |||||| |||||||||||   |||||||| ||||  || ||||| |||||| | |||||||   | |||||||||||||    
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  210 ttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
      || | | | || ||||||||||||||||||||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaa 34644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 14643721 - 14643817
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtgg 161  Q
    |||||||||||||||||||| ||  || |||| |  |||||||| ||||| || ||||||||||| || ||||||||| ||||||  ||||||||||    
T  14643721 tattctgtgatgccatttggtgttactgatgcgcatggtgtcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 20634204 - 20634355
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||| | || || |    
T  20634204 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactcca 20634303  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||| | ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  20634304 agtctaaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 20634355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 24294046 - 24294197
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  24294046 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 24294145  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  24294146 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 24294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 25608125 - 25608276
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || || || || ||||| |||||||||||| | || || |    
T  25608125 aatgcacctggagtatttatggagtacatgaattgcatctttcatgcatttttggatcgattcgtagttgtttttattgatgatattttgatttactcca 25608224  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| |||||  ||| ||||| ||||| |||||| || ||||| |||||    
T  25608225 agtctgaagaagaagatgctgagcatttgaagattgttttacaagtgttgaa 25608276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 2873067 - 2873221
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| ||||||||  ||||||| || ||||||||| | || || |    
T  2873067 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttatgtttatcgacgatattttgatttactcca 2873166  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| ||||||||    
T  2873167 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaagga 2873221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 18963310 - 18963384
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaat 124  Q
    |||||||| || || ||||| |||||||| || || ||  |||||||||||||||| ||||||||||||||||||    
T  18963310 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcaccaggtgtatttatggagtacatgaat 18963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 28281086 - 28281228
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| |||||||   || |||||||| ||||| ||||| ||| || | ||||||||| |||| |    
T  28281086 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaagactgaag 28281185  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||||||||  || | | |||| |||||||||||||| |||||    
T  28281186 gagagcatgcagaacatctgagaattgtgttgcaagttttgaa 28281228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 18196049 - 18196142
Alignment:
Q  144 tggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||||||||||||||| ||||| ||  ||||||||||| | || || ||||| || |||||||||| | ||| ||||| |||||| ||||||||    
T  18196049 tggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagt 18196142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 22435871 - 22435735
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||  | || || ||| || | ||||| |    
T  22435871 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttaatttactccaagactaaagaagaac 22435772  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| | ||| |||||| |||||||| |||||    
T  22435771 atgttgagcatctgaagattgtcttgcaagtgttgaa 22435735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 22444269 - 22444133
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||  | || || ||| || | ||||| |    
T  22444269 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttaatttactccaagactaaagaagaac 22444170  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| | ||| |||||| |||||||| |||||    
T  22444169 atgttgagcatctgaagattgtcttgcaagtgttgaa 22444133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 18450481 - 18450434
Alignment:
Q  131 tttcatccttatctggatcgttttgtggtggtgtttatagatgatatt 178  Q
    |||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  18450481 tttcatacttatctagatcgttttgttgttgtgtttatagatgatatt 18450434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 19866704 - 19866553
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| || ||||| |||||||||||| | || || |    
T  19866704 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcgctttgtggttgtttttatcgatgatattttgatttactcca 19866605  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || ||||  |||| |||| ||||| | ||| |||||| |||||||| |||||    
T  19866604 agactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 19866553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 21473609 - 21473533
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| ||||||||||| |||||  |||| |||||| |||||||||||   |||||||| ||||||||  |||||||    
T  21473609 ggtgtgtttatggagtatatgaaccgaatttttcatgcttatctggataaatttgtggttgtgtttatttatgatat 21473533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 15611976 - 15611734
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611976 gattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 15611877  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15611876 ggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 15611777  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| |||||||||||| |||||||| |||||    
T  15611776 aagagcatgctgagcatttgaggattgtcttgcaagttttgaa 15611734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 30139679 - 30139437
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139679 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 30139580  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  30139579 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 30139480  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  30139479 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 30139437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 30149230 - 30148988
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149230 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 30149131  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  30149130 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 30149031  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  30149030 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 30148988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 8272666 - 8272908
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8272666 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 8272765  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8272766 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 8272865  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  8272866 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 8272908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6151120 - 6151365
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  6151120 gattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcca 6151219  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6151220 ggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgagg 6151319  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| | ||| ||||||||||||||| ||||||||    
T  6151320 aggagcatgctgagcatctgacgattgtgttgcaagtgttgaagga 6151365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 13965619 - 13965855
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||| ||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  13965619 gattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 13965718  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13965719 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 13965818  T
Q  201 aag-agcatgttgagcgtttgaggattgtgttgcaag 236  Q
    ||| |||||| ||||| ||||||||||||||||||||    
T  13965819 aagaagcatgctgagcatttgaggattgtgttgcaag 13965855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 15948737 - 15948979
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||    
T  15948737 gattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaatgcgcca 15948836  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| || |||||||||||||||||||||||| |||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  15948837 ggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaagtctgagg 15948936  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||||||||| | ||||||||||||||||||| |||||    
T  15948937 aagagcatgttgagcatctgaggattgtgttgcaagtcttgaa 15948979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25768191 - 25767946
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| |||| || || |||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||| | |||    
T  25768191 gattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaattcgcca 25768092  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||     
T  25768091 ggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaatctgaga 25767992  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| |||||||||| |||||||||| ||||||||    
T  25767991 aggagcatgctgagcatttgaggattatgttgcaagtcttgaagga 25767946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 6151406 - 6151460
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6151406 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 6151460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 8272952 - 8273006
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272952 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 8273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 15611690 - 15611636
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611690 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 15611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 30139393 - 30139339
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139393 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 30139339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 30148944 - 30148890
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30148944 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 30148890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 13965906 - 13965960
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13965906 ttgaaggaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtgg 13965960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 15261402 - 15261248
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | |||||||||| ||||| || || || |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    || |||| ||||| |||| ||||| ||||| |||||| ||||||||  |||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaagga 15261248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 16258730 - 16258682
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16258730 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 16258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 18915313 - 18915261
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 291  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18915313 ttgaaggaagtaagtttccttggtcatgtgatttctaagggtggtatttctgt 18915261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 12795823 - 12795769
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  12795823 ttgaaggaagtgagttttcttggtcatgtgatttctaagggtagtatttctgtgg 12795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 25767905 - 25767851
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  25767905 ttgaaggaagtgagtttccttggtcatgtgatttctcagggtggtatttatgtgg 25767851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 28756102 - 28755945
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| |||||||||||||| |||||||||    
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaa 28755945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 15723292 - 15723443
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || |||||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || |    
T  15723292 aatgcacctggagtgtttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactcca 15723391  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  15723392 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 15723443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 11950253 - 11950406
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| |||||  |||| || ||| |||| ||||||   || ||||| |||||||| ||||||||| || | |||||    
T  11950253 ctaatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattc 11950352  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  || | ||||| |||||||||||||||||||||    
T  11950353 taagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaa 11950406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 14088457 - 14088304
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | |||||||||| ||||||||||||||    
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaa 14088304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 18751525 - 18751476
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  18751525 ggaagtgagtttcctttgtcatgtgatttctaagggtggtatctctgtgg 18751476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 47125728 - 47125571
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||| |  | |||||    
T  47125728 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatctattc 47125629  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  47125628 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 47125571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 55514290 - 55514331
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtat 285  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  55514290 ggaagtgagtttccttggtcatgtgatttctaagggtggtat 55514331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 11889636 - 11889792
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| |||||||| || ||||| ||||||||| | || |||||| | ||| | ||||| || ||||| ||||| || |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     |||| | ||||||| |||| ||||| ||||| |||||| ||||||||  |||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagtgctgaagga 11889792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 15587750 - 15587901
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | ||||||||| |||||||| |||||||| || ||||||||| | || || |    
T  15587750 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 15587849  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||||||||| | ||| |||||| || ||||| |||||    
T  15587850 agactgaagaagaacatgttgagcatctgaagattgtcttacaagtgttgaa 15587901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 55498570 - 55498491
Alignment:
Q  156 tggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaa 235  Q
    ||||||||||||| |||||||| || |||||||||||||| |||||  ||||||  |||| ||| |||||||||||||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaa 55498491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 13254480 - 13254311
Alignment:
Q  74 atgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatg 173  Q
    ||||| ||||||||  | |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || |    
T  13254480 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacg 13254381  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||| | || || ||| |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  13254380 atattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 13254311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 13970465 - 13970618
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | ||||| |||| ||||||||||||||    
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaa 13970618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 20060394 - 20060563
Alignment:
Q  74 atgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatg 173  Q
    ||||| ||||||||  | |||||||| || || ||||||||||| |||||| | || || ||| | | ||||||||| |||||||| |||||||| || |    
T  20060394 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttctggatcggtttgtggttgtgtttatcgacg 20060493  T
Q  174 atattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||| | || || ||| |||| ||||| ||||  |||| | ||| |||||| |||||||| |||||    
T  20060494 atattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaa 20060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 14874857 - 14875008
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || || ||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||| | || || |    
T  14874857 aatgcacctggagtattcatggagtacatgaatcgcatctttcatgcctttttggatcgattcgtggttgtttttatcgatgatattttgatttactcca 14874956  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  14874957 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 14875008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 15341041 - 15340890
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || |    
T  15341041 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactcca 15340942  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||| ||| |||||    
T  15340941 agactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaa 15340890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 15346603 - 15346754
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  15346603 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 15346702  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  15346703 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 15346754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 44779020 - 44778878
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||  |||||| |||| |||||| ||| |||||||   || |||||||| ||||| ||||| ||| || | ||||||||| |||| |    
T  44779020 ggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaagactgaag 44778921  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| |||||||||||||| |||||    
T  44778920 aagagcatgcagaacatctgagaattgtgttgcaagttttgaa 44778878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 13318828 - 13318937
Alignment:
Q  71 gtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatag 170  Q
    ||||||||||| || ||  ||||||| || ||||| || |||||||| |||||  |||| |||||| ||| |||||||   ||||||||||| ||||| |    
T  13318828 gtgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattg 13318927  T
Q  171 atgatatttt 180  Q
    ||||||||||    
T  13318928 atgatatttt 13318937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 15229375 - 15229234
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| |||||||| |||||||||||||  || ||| ||||||| |||   |||||||| |||||||| |||||||| ||  | ||||| ||| |||| ||    
T  15229375 gtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattctaagactgaaga 15229276  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||  |||| | |||  ||| |||||||||| |||||    
T  15229275 agagcatgcagagcatctgaaaattatgttgcaagtgttgaa 15229234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 15235243 - 15235102
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| |||||||| |||||||||||||  || ||| ||||||| |||   |||||||| |||||||| |||||||| ||  | ||||| ||| |||| ||    
T  15235243 gtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattctaagactgaaga 15235144  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||  |||| | |||  ||| |||||||||| |||||    
T  15235143 agagcatgcagagcatctgaaaattatgttgcaagtgttgaa 15235102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 6710865 - 6710929
Alignment:
Q  182 gtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||||||| ||||| ||||| ||||||| ||||| |||||||||||||||||  || ||||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaagga 6710929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 15014072 - 15014200
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  |||| || || || || |||||||| || |||||| | || |||||| ||||| ||||||    
T  15014072 tatggacattacgaatattcggtgatgcctttcggtgttactaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatc 15014171  T
Q  150 gttttgtggtggtgtttatagatgatatt 178  Q
    | ||||| || ||||||||||||||||||    
T  15014172 gatttgttgttgtgtttatagatgatatt 15014200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 15400890 - 15401026
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |    
T  15400890 tttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15400989  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||| | ||| |||||| |||| ||| |||||    
T  15400990 atgctgagcatctgaagattgtcttgcgagtgttgaa 15401026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 17491622 - 17491471
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||| ||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||  | || || |    
T  17491622 aatgcacctggagtatttatgaagtacatgaatcgcatctttcattcatttttggatcggttcgtggttgtttttattgatgatattttaatttactcca 17491523  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  17491522 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 17491471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 242
Target Start/End: Complemental strand, 12500020 - 12499870
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || || ||| | | | ||||||| || ||||| || ||||| || ||||||||| | || || |    
T  12500020 aatgcacctggagtgtttatggagtacatgaatcgcatcttccatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 12499921  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattga 242  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| ||||    
T  12499920 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttga 12499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 16379284 - 16379426
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| | | |||||||   ||  ||||||| ||||| ||||||||| || | ||||| ||| || | |    
T  16379284 ggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaattcctggtggtatttattgatgatattctgatttattctaagacttaag 16379383  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| ||||||||||||||||||||    
T  16379384 aagagcatgcagaacatctgagaattgtgttgcaagtattgaa 16379426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 55498733 - 55498665
Alignment:
Q  167 atagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaa 235  Q
    ||||||||||| || |||||||  ||||| ||||| |||| ||| |||| |||||||||| ||||||||    
T  55498733 atagatgatatcttagtgtattgaaagtcggaggaggagcttgtggagcatttgaggattttgttgcaa 55498665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 193; Significance: 1e-105; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 8867 - 9099
Alignment:
Q  11 aaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtcttta 110  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8867 aaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtcttta 8966  T
Q  111 tggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgt 210  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||     
T  8967 tgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgc 9066  T
Q  211 tgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||| |||||||||||||||||||||||||||    
T  9067 tgagcatttgaggattgtgttgcaagtattgaa 9099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 9143 - 9197
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9143 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 55981 - 55788
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || ||||||||||||||||||   || |||||| | | | | ||||    
T  55981 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcccctggagtgtttatggagtacatgaatcacatttttcatgcattttttgatc 55882  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| ||||| || || || ||||| |||||| | || || ||| |||||||||| |||||||||| ||||| || ||| |||||||| |||||    
T  55881 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaa 55788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 40858 - 40665
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||    
T  40858 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 40759  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| |||||  | || || ||||| |||||  | || || ||| | |||||||| |||| ||||| ||||| || ||| |||||||| |||||    
T  40758 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaa 40665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 74578 - 74385
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||    
T  74578 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 74479  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| |||||  | || || ||||| |||||  | || || ||| | |||||||| |||| ||||| ||||| || ||| |||||||| |||||    
T  74478 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaa 74385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 191; Significance: 1e-104; HSPs: 3)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 7892 - 8134
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7892 gattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 7991  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  7992 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaagtcggagg 8091  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||||||||| | ||||||||||||||||||| |||||    
T  8092 aagagcatgttgagcatctgaggattgtgttgcaagttttgaa 8134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 8178 - 8232
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8178 ttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtattgctgtgg 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 16298 - 16141
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  16298 ctaatgcgcctggtgtgtttatggagtatatgaacggaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 16199  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     | | |||| ||||||||||  |||| | ||| |||||| |||||||| |||||||||    
T  16198 tacgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaggaa 16141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16875566 - 16875808
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16875566 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 16875665  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16875666 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 16875765  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  16875766 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 16875808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 21848808 - 21849050
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | |||||| |||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21848808 gattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 21848907  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  21848908 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 21849007  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  21849008 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 21849050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 20650827 - 20651071
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20650827 attagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 20650926  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| || ||||| ||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  20650927 gtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaatctgagga 20651026  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     |||||||  |||| ||||||||||||||||||||| ||||||||    
T  20651027 ggagcatgccgagcatttgaggattgtgttgcaagtcttgaagga 20651071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 22436612 - 22436368
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| |||| |||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  22436612 attagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaatgcgccag 22436513  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22436512 gtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 22436413  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
      |||||| ||||| ||||||||| ||||||| ||| || |||||    
T  22436412 gaagcatgctgagcatttgaggatagtgttgcgagtcttaaagga 22436368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 21195014 - 21195255
Alignment:
Q  4 tagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||| |||||  ||||||    
T  21195014 tagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataatgtgccaggt 21195113  T
Q  104 gtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaag 203  Q
      ||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||| |    
T  21195114 a-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaatctgaggagg 21195212  T
Q  204 agcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  21195213 agcatgctgagcatttgaggattgtgttgcaagtattgaagga 21195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23155513 - 23155756
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||| | | ||||| | |    
T  23155513 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaatgcgcta 23155610  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| ||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  23155611 ggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaagtctgagg 23155710  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | || |||||||||| |||||||||||||||| |||| ||||||||    
T  23155711 aggatcatgttgagcatttgaggattgtgttgtaagtcttgaagga 23155756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 23902464 - 23902228
Alignment:
Q  11 aaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtcttta 110  Q
    |||| |||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  111 tggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgt 210  Q
    |||| || |||||||||||||||||||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||||||| |||||| |||||||     
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgc 23902265  T
Q  211 tgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    ||||| |||||||||| ||||||  || |||||||||    
T  23902264 tgagcatttgaggattatgttgcgtgtcttgaaggaa 23902228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 16414385 - 16414306
Alignment:
Q  17 gaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgc 96  Q
    |||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16414385 gaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgc 16414306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 16875852 - 16875906
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875852 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 16875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 20651112 - 20651166
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20651112 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 20651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 21849094 - 21849148
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21849094 ttgaaggaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtgg 21849148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 22376015 - 22376160
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | |||||||||||||||| ||||| || || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    || |||| ||||| |||| ||||| ||||| |||||| ||||||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagt 22376160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 22422454 - 22422605
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | |||||||||| ||||| || || || |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| || ||||| |||||||| | ||||| |||||| |||||||| |||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaa 22422605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 22436322 - 22436273
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22436322 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttccgtgg 22436273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 23155797 - 23155848
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 290  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  23155797 ttgaaggaagtgagtttccttagtcatgtgatttctaaggatggtatttctg 23155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 246
Target Start/End: Complemental strand, 23887289 - 23887089
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || |||||||| |||||||| || || ||  ||||||| |||| ||| ||||||||||||||||||   || |||||| ||||| | ||||    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaaga----gcatgttgagcgtttgaggattgtgttgcaagtattgaagg 245  Q
    | || ||||| ||||| || |||||||||||| | || || |||||| | |||||    | ||||||||| ||||| |||||| ||||||||  ||||||    
T  23887189 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtctaaagaagaacatgtatgttgagcatttgaagattgttttgcaagtgctgaagg 23887090  T
Q  246 a 246  Q
    |    
T  23887089 a 23887089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 20390292 - 20390163
Alignment:
Q  118 catgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgt 217  Q
    |||||||||||| || ||| |||   ||||||| |||||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||  |||| |    
T  20390292 catgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcat 20390193  T
Q  218 ttgaggattgtgttgcaagtattgaaggaa 247  Q
    || | ||||||||||||||| |||||||||    
T  20390192 ttaaagattgtgttgcaagtgttgaaggaa 20390163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 23902182 - 23902141
Alignment:
Q  245 gaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23902182 gaagtgagtttccttggtcatgtgatttctaagggtggtatt 23902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 28983132 - 28982975
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||||||||| ||||| ||||||||| |  | |||||    
T  28983132 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28983033  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  28983032 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 28982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 28988351 - 28988194
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||||||||| ||||| ||||||||| |  | |||||    
T  28988351 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28988252  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  28988251 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 28988194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 22988939 - 22988804
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| |||||||| |||||||||   || |||||| | | | |||||||||| ||||| ||||| || |||||||||||| | ||||| ||| |||| ||    
T  22988939 gtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagactgaaga 22988840  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||| |||| ||||| ||||| |||||| ||||||||    
T  22988839 agaacatgctgagcatttgaagattgttttgcaagt 22988804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 24631183 - 24631345
Alignment:
Q  47 aggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctgg 146  Q
    |||||| | ||||||||||||||||| ||| ||||||| ||  ||||||  | |||  | |||||||| ||||||||||  ||||| |||  ||||  ||    
T  24631183 aggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaatatgatattccattattattggg 24631282  T
Q  147 atcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||  | |||||| ||||| ||||| ||||| ||||||| ||||||||| ||||| |||||||    
T  24631283 atcagtgtgtggttgtgttcatagacgatatcttggtgtcttcgaagtcggaggaggagcatg 24631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 6605879 - 6605722
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||| ||||| |||||||||||  | |||||    
T  6605879 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 6605780  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| ||||| || |||||||||    
T  6605779 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaggtgttgaaggaa 6605722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 19869954 - 19869818
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    ||||| || ||||||||||| |||||||| |||||||| || || || ||||| || ||||||||||| ||||| ||||| || ||||| ||| | ||||    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatccgtatttagatc 19869855  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgta 186  Q
      || || || || || || |||||||||||||||||    
T  19869854 agttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 21195300 - 21195344
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtattt 287  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||    
T  21195300 aggaagtaagtttccttggtcatgtgatttctcagggtggtattt 21195344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 17672585 - 17672736
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  17672585 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 17672684  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  17672685 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 17672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 20016825 - 20016976
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  20016825 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 20016924  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  20016925 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 20016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 21253163 - 21253012
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || | ||| || ||||| |||||||||||| | || || |    
T  21253163 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgaggttgtttttatcgatgatattttgatttactcca 21253064  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | ||  |||||||||||||    
T  21253063 agtctgaagaagaacatgctgagcatttgaagctggttctgcaagtattgaa 21253012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 21927649 - 21927531
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  21927649 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 21927550  T
Q  190 gaagtctgaggaagagcat 208  Q
     ||| |||| |||||||||    
T  21927549 taagactgaagaagagcat 21927531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 20008481 - 20008626
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||  ||||||||  |  | |||||    
T  20008481 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttagtgatgatatcctaatttattc 20008580  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaa 235  Q
     |||  ||| ||||||||||  |||| | ||| |||||||||||||    
T  20008581 taagaatgaagaagagcatgcagagcatatgaagattgtgttgcaa 20008626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 18858796 - 18858645
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || || |||||| | || || |    
T  18858796 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgacattttgatttactcca 18858697  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  18858696 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 18858645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 19861656 - 19861569
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||||| || ||||| |||||| |||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||| ||||||||    
T  19861656 ctaatgcgcctggtgtgtttatgaagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatat 19861569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 22118737 - 22118888
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  22118737 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 22118836  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| | || ||||| | ||| |||||| |||||||| |||||    
T  22118837 agactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaa 22118888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 22127521 - 22127672
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  22127521 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 22127620  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| | || ||||| | ||| |||||| |||||||| |||||    
T  22127621 agactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaa 22127672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 22131603 - 22131754
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| ||  | || |||||||| |||||||||||| | || || |    
T  22131603 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcctttttggatcgattctttgttgtgtttatcgatgatattttgatctactcca 22131702  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| ||||| |||||| |||||||| |||||    
T  22131703 agactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaa 22131754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 22373152 - 22373065
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||||| || ||||| || ||||||||||||||| |||| || ||| |||||||||||   |||||||| |||||||  ||||||||    
T  22373152 ctaatgcgcctggtgtgttcatggagtacatgaattgaattttccatgcttatctggataaatttgtggttgtgtttactgatgatat 22373065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 23652260 - 23652109
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| ||||| |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || || || ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| || || |||| ||||| ||||| |||||| || ||||| |||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaa 23652109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 27356757 - 27356670
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||    
T  27356757 ctaatgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatat 27356670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 32602364 - 32602213
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || || || |||||||| |||||||||||| | || || |    
T  32602364 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcctttttggatcggttcgttgttgtgtttatcgatgatattttgatttactcca 32602265  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  32602264 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 32602213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 16269795 - 16269941
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| |||||||| || |||||||| ||| | ||||| |||  ||| |    
T  16269795 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgttcattgatgatatcttgatttattccaagaatgaag 16269894  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    | |||||||  ||||   |||| ||||| |||||||| |||||||||    
T  16269895 aggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaa 16269941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 22317192 - 22317158
Alignment:
Q  252 gtttccttggtcatgtgatttctaagggtggtatt 286  Q
    ||||||||||| |||||||||||||||||||||||    
T  22317192 gtttccttggtaatgtgatttctaagggtggtatt 22317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 22246995 - 22247140
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||| | | | | ||||||||||  |||| ||||| || || ||||||||| | || || |    
T  22246995 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcctgcgtttttggatcgtttcatggttgtgttcatcgacgatattttgatatactcca 22247094  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||  ||| | ||| |||||||||| ||||  |||||| ||||||||    
T  22247095 agattgaaggagaacatgttgagcatttgtagattgttttgcaagt 22247140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 14567352 - 14567276
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||    
T  14567352 ggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatat 14567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 19980171 - 19980035
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| || ||||||||| | || || ||| |||| ||||| |    
T  19980171 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactccaagactgaagaagaac 19980072  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||  | ||| |||||| |||||||| |||||    
T  19980071 atgctgagaatctgaagattgtcttgcaagtgttgaa 19980035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 24568237 - 24568481
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| ||||||||||||||||||||||||||  ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24568237 attagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcatcag 24568336  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  24568337 gtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaagtctgagga 24568436  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     ||||||||||||| ||||||||||||||||||||| ||||||||    
T  24568437 ggagcatgttgagcatttgaggattgtgttgcaagtcttgaagga 24568481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24829756 - 24829990
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24829756 gattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 24829855  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  24829856 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 24829955  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaa 235  Q
    |||||||||  |||| |||||||||||||||||||    
T  24829956 aagagcatgcggagcatttgaggattgtgttgcaa 24829990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 22279960 - 22279738
Alignment:
Q  21 atatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacat 120  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  121 gaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttg 220  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  |||| ||||||| ||||| ||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaaatcgaaggaggagcatgctgagcatttg 22279761  T
Q  221 aggattgtgttgcaagtattgaa 243  Q
    |||||||||||||||||||||||    
T  22279760 aggattgtgttgcaagtattgaa 22279738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 22760138 - 22760382
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| ||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||  |||| | ||    
T  22760138 attagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccgatgcgctag 22760237  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  22760238 gtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaatctgagga 22760337  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     ||||||| | ||| | ||||||||||||||||||| ||| ||||    
T  22760338 ggagcatgctaagcatctgaggattgtgttgcaagttttggagga 22760382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25130484 - 25130239
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||    
T  25130484 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaatgcgcca 25130385  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||  |||| || ||||||||||||||||||||||  ||||| || |||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  25130384 ggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaagtctgagg 25130285  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| ||||||| ||||||||| ||| || |||||    
T  25130284 aggagcatgctgagcatttgagggttgtgttgcgagtcttaaagga 25130239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 234
Target Start/End: Original strand, 10037940 - 10038133
Alignment:
Q  41 cgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatcctt 140  Q
    |||| ||||||||| |||||||| || | ||||||| ||||||| ||  ||||||| |  |||||||| ||||| |||||||||||||| || |||||||    
T  10037940 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 10038039  T
Q  141 atctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgca 234  Q
    || ||||||  ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||  |||| | | ||||||||||||||    
T  10038040 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgca 10038133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 234
Target Start/End: Original strand, 10098325 - 10098518
Alignment:
Q  41 cgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatcctt 140  Q
    |||| ||||||||| |||||||| || | ||||||| ||||||| ||  ||||||| |  |||||||| ||||| |||||||||||||| || |||||||    
T  10098325 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 10098424  T
Q  141 atctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgca 234  Q
    || ||||||  ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||  |||| | | ||||||||||||||    
T  10098425 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattgtgttgca 10098518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 23112510 - 23112365
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| ||||||||||||||||||||||| || ||| ||||||||||||  ||||| || |||||||| |||||||| ||| | ||||| ||| |||| ||    
T  23112510 gtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattctaagactgaaga 23112411  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    ||||||||  |||| ||| | ||||||||||||||| |||||||||    
T  23112410 agagcatgcagagcatttaaagattgtgttgcaagtgttgaaggaa 23112365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 30010816 - 30010988
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgt 164  Q
    |||||||||||||| ||  | ||  ||||||| ||||| || |||||| | || |||||| | || |||||| ||||||||||||||||||| || ||||    
T  30010816 tattctgtgatgcctttcagtgttactaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgt 30010915  T
Q  165 ttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||||||||||||||||| | || || ||||| ||||| || ||||| |||| |||||| ||||| ||||||||    
T  30010916 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagt 30010988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 12639087 - 12639141
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12639087 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 12639141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 22279694 - 22279640
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22279694 ttgaaggaagtgagtttccttggtcatgtgatttctaagtgtggtatttctgtgg 22279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 23098675 - 23098813
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||||| || |||||| ||| ||||||| | || |||||||||||||| |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgt 228  Q
     ||| |||| ||||||||||  |||| | ||||||||||    
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgt 23098813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 1065537 - 1065380
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||| |||| || ||| ||| |||||||   ||||||||||| ||||| |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| || ||||||||||| |||||||||    
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaa 1065380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 24830045 - 24830094
Alignment:
Q  242 aaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24830045 aaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 24830094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 24568527 - 24568576
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24568527 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtgg 24568576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 24818847 - 24819043
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | ||||| |||||||| |||||||||||| ||||| | || |||||| | ||| | ||||    
T  24818847 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 24818946  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||  |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||| |||||||||||| ||||||||  |||||||    
T  24818947 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaagga 24819043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 30209615 - 30209721
Alignment:
Q  131 tttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgt 230  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||| | || || ||||| ||||| || ||||| || | |||||| ||||| |    
T  30209615 tttcatacttatctggatcgttttgttgttgtgtttatagatgatattttgatatactccaagtccgaggaggaacatgtcgaacatttgagaattgttt 30209714  T
Q  231 tgcaagt 237  Q
    | |||||    
T  30209715 ttcaagt 30209721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 31832444 - 31832287
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | |||||    
T  31832444 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 31832345  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  31832344 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 31832287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 22760427 - 22760477
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  22760427 aggaagtgagtttccttggtcatgtgatttttaagggtgatatttccgtgg 22760477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 24711818 - 24711667
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  24711818 aatgcacctggagtgtttatggagtatatgaatcgcattttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 24711719  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  24711718 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 24711667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 25130191 - 25130152
Alignment:
Q  246 aagtgagtttccttggtcatgtgatttctaagggtggtat 285  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25130191 aagtgagtttctttggtcatgtgatttctaagggtggtat 25130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 12576128 - 12575986
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||| |||| |||||| ||| | |||||   || |||||||| ||||| ||||| ||| || | ||||||||| |||| |    
T  12576128 ggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattcgaagactgaag 12576029  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||| |||||||||||||| |||||    
T  12576028 aagagcatgcagaacatctgagaattgtgttgcaagttttgaa 12575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 23278562 - 23278409
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| |||||  |||| || ||| |||||||||||  ||| ||||| || ||||| ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  || | | ||| ||||||||||||| |||||||    
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaa 23278409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 9337366 - 9337215
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  9337366 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 9337267  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  9337266 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 9337215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 10870634 - 10870483
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  10870634 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 10870535  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  10870534 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 10870483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 23106387 - 23106538
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||  || ||||| || || || |||||||||||| | || || |    
T  23106387 aatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatcagttcgtggttgttttcattgatgatattttgatttactcca 23106486  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  23106487 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 23106538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 23189702 - 23189551
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || || || ||||||||||| ||||||||| | || || |    
T  23189702 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtagttgtgtttatagacgatattttgatttactcca 23189603  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||||||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  23189602 agactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 23189551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 24264154 - 24264003
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||| | |||||||| |||||||| || ||||||||| | || || |    
T  24264154 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggattggtttgtggttgtgtttatcgacgatattttgatttactcca 24264055  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| || || |||||||||| | ||| |||||| |||||||| |||||    
T  24264054 agactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaa 24264003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 27219800 - 27219649
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  27219800 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 27219701  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  27219700 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 27219649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 27208849 - 27208937
Alignment:
Q  110 atggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctga 198  Q
    |||||||| |||||  |||| || ||| ||| |||||||   || ||||||||||||||||||||||||||| | ||||| ||| ||||    
T  27208849 atggagtatatgaaccgaattttccatgcttttctggataaattcgtggtggtgtttatagatgatattttgatttattctaagactga 27208937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 183; Significance: 5e-99; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34360 - 34118
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  34360 gattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcca 34261  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34260 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 34161  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  34160 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 34118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 34070 - 34020
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34070 aggaagtaagtttccttggtcatgtgatttctaagggtggtatttctgtgg 34020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 183; Significance: 5e-99; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 42533 - 42291
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  42533 gattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcta 42434  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  42433 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 42334  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  42333 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 42291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 42247 - 42193
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42247 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 42193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 31797 - 31950
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | |||||||||| ||||||||||||||    
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaa 31950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 181; Significance: 8e-98; HSPs: 2)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 16332 - 16088
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||    
T  16332 attagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaatgcgtcag 16233  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16232 gtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaagtctgagga 16133  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     ||||||||||||| ||||||||||||||||||||| ||||||||    
T  16132 ggagcatgttgagcatttgaggattgtgttgcaagtcttgaagga 16088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 16043 - 15993
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  16043 aggaagtgagtttccctggtcatgtgatttctaagggtggtatttccgtgg 15993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 179; Significance: 1e-96; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 26297 - 26539
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  26297 gattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgcca 26396  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||| |||| | |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26397 ggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgagg 26496  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||| | ||||||||||||||||||||| |||||    
T  26497 aagagcatgctgaacatttgaggattgtgttgcaagtcttgaa 26539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 26583 - 26637
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26583 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggcatttctgtgg 26637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 15291186 - 15291428
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15291186 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 15291285  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15291286 ggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 15291385  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  15291386 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 15291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 12340912 - 12341139
Alignment:
Q  20 gatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtaca 119  Q
    |||||||||||||||| ||||||||   || |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||| || |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  120 tgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgttt 219  Q
    ||||||| ||||| ||||||| ||||||  ||||||||||  | ||||| |||||||| || |||||| ||||||| ||||| ||||||| ||||| | |    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatct 12341111  T
Q  220 gaggattgtgttgcaagtattgaaggaa 247  Q
    ||||||||||||||  || |||||||||    
T  12341112 gaggattgtgttgcgtgtcttgaaggaa 12341139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 247
Target Start/End: Complemental strand, 8708055 - 8707909
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||||||||||||||| || ||| ||||| ||||||| |||||||| |||||||| ||||| || ||| | ||||| |||||||| |    
T  8708055 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaag 8707956  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    |||||||||  |||| || ||   ||||||||||||| |||||||||    
T  8707955 aagagcatgcagagcattagaaagttgtgttgcaagtgttgaaggaa 8707909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 15291472 - 15291524
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291472 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 15291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 14999273 - 14999219
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14999273 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttgtgg 14999219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 14696308 - 14696121
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | ||||| |||||||| |||||||||||||||||    || |||||| | ||| |||||     
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | || ||||| ||||| || |||||||||||| | || |||||||| || ||||| |||| ||||| ||||| |||||| ||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagt 14696121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 9292793 - 9292739
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  9292793 ttgaaggaaatgactttccttggtcatgtgatttctaagggtggtatttctgtgg 9292739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 14849225 - 14849379
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | ||||||| || ||||| ||||| || || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||| || ||||| |||||||||| ||||| |||||| ||||||||  |||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaagga 14849379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 44659994 - 44660140
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||| |||| || ||| ||| |||||||   ||||| ||||||||||| || ||||||||  | ||||| |||  |||||    
T  44659994 ggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattccaagaatgagg 44660093  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    | |||||||  |||| | |||| |||||||||||||| |||||||||    
T  44660094 aggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaa 44660140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 3262911 - 3263068
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 3263068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 15323372 - 15323219
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||| |||||||||||||| || ||| |||||||||||   |||||||| |||||||| ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||  ||| ||||||||||  |||| | |||  |||||||||||||| |||||    
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaa 15323219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 8322850 - 8323012
Alignment:
Q  47 aggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctgg 146  Q
    ||||||||||||||| | ||||| || ||||| |||||  |  |||||||  |||  || |||||||| ||||  ||||  || |||||||| |||  ||    
T  8322850 aggtatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcgg 8322949  T
Q  147 atcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||  |||||||||||||| ||||| ||||||||||||||||||||||  ||||| |||||||    
T  8322950 atcagtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatg 8323012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 15072514 - 15072361
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||||||||||||| | || ||| |||||||||||   |||||||| |||||||| ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||  |||  |||||||||  |||| | ||| ||||||||||||||| |||||    
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 15072361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 14301838 - 14301989
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || |    
T  14301838 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactcca 14301937  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  14301938 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 14301989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 40475193 - 40475042
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || |||||| | | | ||||||| |||||||| ||||| || |||||||||||| | || || |    
T  40475193 aatgcacctggagtgtttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactcca 40475094  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  40475093 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 40475042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 15001482 - 15001635
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || | ||| ||||||||||| |||||  |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||  ||| ||||||||||  || | | ||||||||||||||||||| |||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaa 15001635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 29451654 - 29451811
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||| ||||| |||||||||||  | |||||    
T  29451654 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 29451753  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  || | | |||| ||||| |||||||| |||||||||    
T  29451754 caagaatgaggaggagcatgcagatcatctgagaattgtattgcaagtgttgaaggaa 29451811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 18547696 - 18547832
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    ||||| || ||||||||||| |||| ||| || ||| | ||||| || ||||| || ||||||||||| ||||| ||||| || ||||| ||| | ||||    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgta 186  Q
      ||||| ||||| || || |||||||||||||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgta 18547832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 8051482 - 8051633
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  8051482 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 8051581  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  8051582 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 8051633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 15145744 - 15145895
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||| | || || |    
T  15145744 aatgcacctggagtgtttatggagtacatgaatcgtatctttcatgcatttttggatcgattcgtggttgtctttatcgatgatattttgatttactcca 15145843  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | |||  ||||| |||||||| |||||    
T  15145844 agactgaagaagaacatgctgagcatctgaacattgtcttgcaagtgttgaa 15145895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 23957900 - 23957749
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  23957900 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 23957801  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  23957800 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 23957749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 27713489 - 27713338
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  27713489 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactcca 27713390  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  27713389 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 27713338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 14161661 - 14161567
Alignment:
Q  54 gacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggat 148  Q
    |||| ||||| | ||| |||||||| || || || ||||||||||| || || ||||||||||| ||||| ||||| |||||| |||||||||||    
T  14161661 gacattatgaattttcagtgatgcctttcggtgtttctaatgcacctggagtatttatggagtatatgaacagaatttttcatgcttatctggat 14161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 1647394 - 1647513
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||||| || || ||| ||| |||||||   || |||||||| || || |||||||||||| | |||||    
T  1647394 ctaatgcgcctggtgtgtttatggagtatatgaataggattttccatgcttttctggataaattcgtggtggtattcattgatgatattttgatttattc 1647493  T
Q  190 gaagtctgaggaagagcatg 209  Q
     ||| |||| || |||||||    
T  1647494 taagactgaagaggagcatg 1647513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 17093008 - 17093159
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| || ||||||||| | || || |    
T  17093008 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatctactcca 17093107  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| || ||||| |||||    
T  17093108 agactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaa 17093159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 11205360 - 11205436
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatat 177  Q
    ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| ||||||||    
T  11205360 ggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatat 11205436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 178; Significance: 5e-96; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6960 - 7205
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6960 gattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcacca 7059  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| || ||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  7060 ggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaagtctgagg 7159  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| ||||||||||||||||||||| ||||||||    
T  7160 aggagcatgctgagcatttgaggattgtgttgcaagtcttgaagga 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 7250 - 7300
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7250 aggaagtgagtttccttggtcatatgatttctaagggtggtatttctgtgg 7300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 178; Significance: 5e-96; HSPs: 4)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 1984 - 2225
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| |||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1984 attagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaatgcaccag 2083  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2084 gtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaagtctgagga 2183  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||| ||||| |||||||||| ||||||| || |||||    
T  2184 agagcatgctgagcatttgaggattatgttgcaggtcttgaa 2225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 26594 - 26372
Alignment:
Q  9 tgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctt 108  Q
    |||||||||||||||||||||| ||||  |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  26594 tgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtgtctt 26495  T
Q  109 tatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcat 208  Q
     ||||| || |||||||||||||||||||||| |||||| |||||||||||| |||||||  |||| ||||||||||||||||||   |||||  |||||    
T  26494 catggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaagatcgaggagtagcat 26395  T
Q  209 gttgagcgtttgaggattgtgttg 232  Q
    |||||||  ||||| |||||||||    
T  26394 gttgagc-attgagaattgtgttg 26372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 2273 - 2323
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  2273 aggaagtgagtttccttggtcatgtgatttataagggtggtatttatgtgg 2323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 26312 - 26270
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatt 286  Q
    |||||||| ||||||||||||||||||||| || |||||||||    
T  26312 ggaagtgactttccttggtcatgtgatttcgaaaggtggtatt 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 174; Significance: 1e-93; HSPs: 3)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 977 - 1222
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||    
T  977 gattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaatgcgcca 1076  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||| |||| ||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1077 ggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaagtctgagg 1176  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||||| ||||| ||||||||||||||||||||| ||||||||    
T  1177 aggagcatgctgagcatttgaggattgtgttgcaagtcttgaagga 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 1270 - 1317
Alignment:
Q  246 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  1270 aagtgagtttcctttgtcatgtgatttctaagggtggtatttttgtgg 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 4518 - 4475
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtattt 287  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4518 ggaagtgagtttccttggtcatgtgatttctaagggtgttattt 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 1652 - 1888
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||  ||||||||| ||||||||||||| || |||||||||||||| || ||||| |||    
T  1652 gattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaatgcgcca 1751  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1752 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 1851  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1852 aagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 5837 - 6081
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5837 gattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 5936  T
Q  101 ggtgtctttatggag-tacatgaata-gaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctga 198  Q
    ||||||||||| ||  |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5937 ggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctga 6036  T
Q  199 ggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||    
T  6037 ggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 6081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 6125 - 6179
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6125 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttgtgg 6179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 173; Significance: 5e-93; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 24451 - 24207
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||| | |    
T  24451 gattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaatgcgcta 24352  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  24351 ggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaatctgagg 24252  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaagg 245  Q
    | ||||||| ||||| ||||||||||||||||||||| |||||||    
T  24251 aggagcatgctgagcatttgaggattgtgttgcaagttttgaagg 24207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 24161 - 24111
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24161 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 24111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 8204 - 8053
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | |||||||||||||||| || || || |||||||||||| | || || |    
T  8204 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactcca 8105  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||||| ||||| |||| | ||| ||||| | | || |||||||| |||||    
T  8104 tgtctgaagaagaacatgctaagcatttgaagctagttttgcaagtgttgaa 8053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 834 - 1075
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||    
T  834 gattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaatgcgcca 933  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    | |||||| ||||| || |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  934 gttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaagtctgagg 1032  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    | ||||||| ||||| ||||||||||||||||||||| |||||    
T  1033 aggagcatgctgagcatttgaggattgtgttgcaagttttgaa 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 1123 - 1173
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||| ||||    
T  1123 aggaagtgagtttccttggtcacgtgatttcgaagggaggtatttccgtgg 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 163; Significance: 4e-87; HSPs: 6)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 132520 - 132762
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||| |||||||||||| |||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||     
T  132520 gattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaatgcgccc 132619  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  132620 ggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaagtttgagg 132719  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||    
T  132720 aagagcatgctgagcatttgaggattgtgttgcaagttttgaa 132762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26042 - 25938
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| || || |||||||||||||||||||||||||||||||||| ||||||  ||||| |||    
T  26042 gattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgcca 25943  T
Q  101 ggtgt 105  Q
    |||||    
T  25942 ggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 25942 - 25856
Alignment:
Q  160 ggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||||||  ||||||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaagga 25856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 132806 - 132860
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  132806 ttgaaggaagtgagtttccttggtcatgtgatttctatgggtggtatttctgtgg 132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 25811 - 25761
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  25811 aggaagtaagtttcattggtcatgtgatttctaagggtggtatttatgtgg 25761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 85352 - 85503
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | | ||||| || ||||| || ||||| |||||||||||  | |  || |    
T  85352 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttagatcggttcgtggttgtttttattgatgatattttaatttcctcca 85451  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | |||| |||||||| |||||    
T  85452 agtctgaagaagaacatgctgagcatttgaagcttgttttgcaagtgttgaa 85503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 374 - 137
Alignment:
Q  9 tgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctt 108  Q
    ||||||||||| |||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  374 tgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctt 275  T
Q  109 tatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcat 208  Q
     || ||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  274 catagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaagagcat 175  T
Q  209 gttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||||| |||||||||| |||||||||| ||||||||    
T  174 gctgagcatttgaggattatgttgcaagtcttgaagga 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 159; Significance: 1e-84; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 21879 - 22105
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||    
T  21879 attagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccag 21978  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  21979 gtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgagga 22078  T
Q  202 agagcatgttgagcgtttgaggattgt 228  Q
    |||||||| ||||| ||||||||||||    
T  22079 agagcatgctgagcatttgaggattgt 22105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 31455 - 31681
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||    
T  31455 attagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccag 31554  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  31555 gtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgagga 31654  T
Q  202 agagcatgttgagcgtttgaggattgt 228  Q
    |||||||| ||||| ||||||||||||    
T  31655 agagcatgctgagcatttgaggattgt 31681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 7438 - 7253
Alignment:
Q  52 tggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgt 151  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| | |||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  152 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||||||||| ||| ||||||||||||||||| |||||||| |||||||| ||||||||||||| | |||||||||||||| ||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagt 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 31744 - 31793
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31744 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttccgtgg 31793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 7199 - 7149
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  7199 aggaagtgagtttcctgggtcatgtgatttctaagggtggtatttatgtgg 7149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 1915 - 2122
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | ||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1915 gattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaatgcacca 2014  T
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2015 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaatctgagg 2114  T
Q  201 aagagcat 208  Q
    | ||||||    
T  2115 acgagcat 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 2197 - 2246
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2197 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 2246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 146; Significance: 6e-77; HSPs: 2)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 7037 - 7250
Alignment:
Q  2 attagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 101  Q
    |||||| ||||||||||||||||||||||||| | ||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  7037 attagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaatgcgccag 7136  T
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    || |||| ||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7137 gtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgagga 7236  T
Q  202 agagcatgttgagc 215  Q
     ||||||| |||||    
T  7237 ggagcatgctgagc 7250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 7322 - 7361
Alignment:
Q  243 aggaagtgagtttccttggtcatgtgatttctaagggtgg 282  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  7322 aggaagtgagtttccttggtcatgtgatttcgaagggtgg 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7019 - 6888
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 100  Q
    ||||||| | |||||||||||||||| ||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7019 gattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcacca 6920  T
Q  101 ggtgtctttatggagtacatgaatagaatatt 132  Q
    |||||||||||||| |||||||||||||||||    
T  6919 ggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2214 - 2119
Alignment:
Q  1 gattagaatgaaggcggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgc 96  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2214 gattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaatgc 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 9130 - 8937
Alignment:
Q  41 cgaatgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatcctt 140  Q
    |||| ||||||||| |||||||| || | ||||||| ||||||| ||  ||||||| |  |||||||| ||||| |||||||||||||| || |||||||    
T  9130 cgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctt 9031  T
Q  141 atctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgca 234  Q
    || ||||||  ||| |||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||  |||| | | ||||||||||||||    
T  9030 atttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgca 8937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 9114 - 9310
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| ||||| ||||| |||||||| || || ||  | ||||| |||||||| |||||||||||||||||| | || |||||| | ||| | ||||    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||| ||||| ||||| || |||||||||||| | || || |||||||| ||||| |||||||||| |||||||||||| ||||||||  |||||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaagga 9310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 201599 - 201745
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||||||||||||||| || ||| ||||| ||||||| |||||||| |||||||| |||||||||||| | || || ||| |||| |    
T  201599 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgatattttgatatactctaagactgaag 201698  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    |||| ||||  || | ||||| | ||||||||||||| |||||||||    
T  201699 aagaacatgcagaacatttgaaggttgtgttgcaagtgttgaaggaa 201745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 25094 - 25148
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25094 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 25148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 176464 - 176617
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||||||||||||||| || ||| ||||| ||||||| ||||| || || ||||| ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||||||| ||||||||||  |||| ||| | |||||||||| |||| |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaa 176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 3110 - 2938
Alignment:
Q  65 tattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgt 164  Q
    ||||| |||||||| || || ||  |||||||||| ||||| |||||||| ||||||||| | || |||||| ||||| |||||||||| ||||| ||||    
T  3110 tattcagtgatgcctttcggtgttactaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgt 3011  T
Q  165 ttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | || |||||||||||| | || || |||||||| ||||| |||| ||| | ||||| |||| | ||||||||    
T  3010 tcatcgatgatattttgatataatctaagtctgaagaagaacatgctgaacatttgaagattattttgcaagt 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 7781 - 7932
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| ||  | || || ||||| |||||||||||| | || || |    
T  7781 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcatagttgtttttattgatgatattttgatttactcca 7880  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||||||||| ||||| | | || |||||||| |||||    
T  7881 agtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaa 7932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 24655 - 24806
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | |||| ||||| ||||| ||||| || |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| ||||| |||||| |||||||| |||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaa 24806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 181913 - 181859
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  181913 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtgg 181859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  16 ggaagatatatccaaaaccgtgttccgaatgaggtatggacactatgagtattctgtgatgcc 78  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 5209 - 5362
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||||||||||||||| || ||| |||||||||||   |||||||| |||||||| ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||  ||| ||||||||||  |||| | ||| ||||||||||||||| |||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 5362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 495202 - 495057
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| ||||| |||||||||||| | || |||||| | | | |||||||||||||||| ||||| || || ||||||||| | || ||||    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||||||| ||||| |||| ||||  ||||| |||||| ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagt 495057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 453293 - 453486
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||||||||| |||   |||||||| || || ||  ||||||| || ||||| |||||||| || |||||  |||| || ||| | |||||||||     
T  453293 tatggacactatgaatataaagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggaatatatgaaccgaattttccatgcctatctggata 453392  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
      |||||||| |||||||| ||||| || ||| | |||| |||| |||| ||||||||||  || | | ||| |||||| || |||||||||||    
T  453393 aatttgtggttgtgtttattgatgacatcttgatttatttgaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaa 453486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 104892 - 104944
Alignment:
Q  241 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  104892 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtgg 104944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 48634 - 48787
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||| ||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   |||||||||||||||  || | | |||||||||| ||||||||||||||    
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaa 48787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 163 - 109
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  163 ttgaaggaagtgagtttccttggtcatgtgatttctaaaggtggtatttatgtgg 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 2253 - 2199
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  2253 ttgaaggaagtgagttttcttggtcatgttatttctaagggtggtatttctgtgg 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 237
Target Start/End: Original strand, 27337 - 27515
Alignment:
Q  59 tatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtgg 158  Q
    ||||| |||||||||||||| || || ||  ||||||| || || || ||| |||| || |||||| | || |||||| ||||||| ||||||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  159 tggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | |||||||||||||||||  || | || || ||||||||||| || ||||  |||| |||||| ||||| ||||||||    
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagt 27515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 76571 - 76484
Alignment:
Q  128 atatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagc 215  Q
    ||||| |||||||||||||| |  ||| |||| ||||||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||    
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagc 76484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 54259 - 54313
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  54259 ttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtatttttgtgg 54313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 2636 - 2756
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| |||||||||||||||||| | || |||||| | | | |||||||||| ||||| || || || |||||||||||| | || || ||||||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  201 aagagcatgttgagcgtttga 221  Q
    |||| |||| ||||| |||||    
T  2736 aagaacatgctgagcatttga 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 151279 - 151143
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| ||| |||||||  | || || |||||||| ||||| |    
T  151279 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgataatattttaatttactccaagtctgaagaagaac 151180  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||| ||||| | | ||||||||||| |||||    
T  151179 atgctgagcatttgaagctggtgttgcaagtgttgaa 151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 147 - 340
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | |||||||| ||||| || ||||||||||||||| | || |||||| | | | ||||||    
T  147 tatggacattatgagtataacgtgatgccgttcggtgttacaaatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatc 246  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| ||||| || || || ||||| |||||| | || || ||| |||||||||| |||| ||||| ||||| || |||||||||||| |||||    
T  247 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaa 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 121 - 274
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || |||||||| ||||||||||| |||||| |||||||||||   |||||||| ||||  || ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||   | |||||||||||||  || | | |||| ||||||||||||||||||||    
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaa 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 13146 - 13195
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13146 ggaagtgagtttccttggtcatgtgatttcttagggtggtatttctgtgg 13195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 40453 - 40610
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
     |||  |||||| |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 40610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 4092 - 3953
Alignment:
Q  98 ccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctg 197  Q
    |||||||| |||||||||||||||||| | || |||||| | | | |||||||||| ||||| ||||| || || ||||||||| | || || ||| |||    
T  4092 ccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagactg 3993  T
Q  198 aggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | ||||| |||| ||||| ||||| |||||| ||||||||    
T  3992 aagaagaacatgctgagcatttgaagattgtattgcaagt 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 1969 - 2125
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||||||||||||||| | || |||||| | ||| | ||||| ||  |||| ||||| || |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
     |||||| | ||||| |||||||||| ||||| |||||| ||||||||  |||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaagga 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 10821 - 11017
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | ||||| |||||||| |||||||||||| ||||| | || |||||| | ||| | ||||    
T  10821 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 10920  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||  |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||| |||||||||||| ||||||||  |||||||    
T  10921 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaagga 11017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 17013 - 17209
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| || || ||||| |||||||| || || ||  | ||||| |||||||| |||||||||||| ||||| | || |||||| | ||| | ||||    
T  17013 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 17112  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    | ||  |||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||| |||||||||||| ||||||||  |||||||    
T  17113 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaagga 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 24430 - 24565
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| |||||||||||||||||| | || |||||| | ||||| |||||||| ||||| ||||| || || || |||||| | || || ||| |||| ||    
T  24430 gtgtgtttatggagtacatgaatcgcatttttcatgcgtatctagatcgtttcgtggttgtgttcatcgacgacattttgatatactctaagactgaaga 24529  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||| | ||||| || ||||| |||||| ||||||||    
T  24530 agaacttgttgcgcatttgaagattgttttgcaagt 24565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 11012 - 10861
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| || ||||| ||||||||||||||||||||||| || ||| ||||| ||||||  ||||| || |||||||| ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| |||||||||   |||| ||| | |||||| |||||||| |||||    
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaa 10861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 7209 - 7360
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| ||||| |||||||||||||||||| |||| |||||| | | | ||||||||||  |||| || || || ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| ||||| || ||| |||||||| |||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaa 7360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 17061 - 16910
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | ||| | ||||| || ||||| ||||| || || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| ||||| |||||| |||||||| |||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaa 16910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 195609 - 195760
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||||||||  || ||||||||||| |||||| | || || ||| | | |||||||||||||||||| || ||||| |||||||||||| | || || |    
T  195609 aatgcaccagaagtatttatggagtatatgaatcgcatcttccatgcatttctggatcgttttgtggttgtctttatcgatgatattttgatttactcca 195708  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| | ||| | |||| |||||||| |||||    
T  195709 agtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagtgttgaa 195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 103459 - 103300
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    ||||||||||||||||||   |||||||| || || ||  | ||||| |||||||| |||||||||| ||||||| | || |||||| | | | ||||||    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||| ||||| || || || |||||||||||| | || || |||||||||||||| ||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatg 103300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 1809 - 1943
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||||||||| || || |||||| ||||||||||||| || ||||| || || |||   |||||||| || ||||||||||||||||||||||| ||    
T  1809 ctaatgcaccaggagtgttcatggagcacatgaatagaattttccatccctacctagataaatttgtggttgtctttatagatgatattttggtgtactc 1908  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgagga 224  Q
     |||||  | ||||| | |||||||| ||| ||||    
T  1909 taagtccaaagaagaacgtgttgagcatttaagga 1943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 11027 - 11081
Alignment:
Q  239 ttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtgg 293  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11027 ttgaagggagtgattttccttggtcatgtgatttctaagggtggtatttatgtgg 11081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 244
Target Start/End: Complemental strand, 41922 - 41728
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    ||||| |||||||| |||   |||||||| || |||||  ||||||| || ||||| ||||||||||| ||||| ||||| || ||| ||||| |||||     
T  41922 tatggtcactatgaatataaggtgatgcctttcggagttactaatgcgcctggtgtgtttatggagtatatgaacagaattttgcatgcttatatggata 41823  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaag 244  Q
      |||||||| |||||||| ||||| || ||  | ||||| |||  ||| ||||||||||  |||| | ||| ||||||||||||||| ||||||    
T  41822 aatttgtggttgtgtttattgatgacatcttaatttattctaagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaag 41728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 46735 - 46776
Alignment:
Q  244 ggaagtgagtttccttggtcatgtgatttctaagggtggtat 285  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  46735 ggaagtgagtttccttggtcatgtgatttctaagagtggtat 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 14844 - 14990
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||||||||||  ||| || ||| ||| |||||||   ||||| ||||||||||| |||||||||||  | ||||| |||  |||||    
T  14844 ggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattccaagaatgagg 14943  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    | |||||||  |||| | |||| ||||| |||||||| |||||||||    
T  14944 aggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaa 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 16825 - 16696
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||||||||| || |||||||||||||||||| | || |||||| |   | ||||||| || |||||||| ||||| |||||||||||| | || || |    
T  16825 aatgcaccaggagtatttatggagtacatgaatcgcatctttcatgcacttttggatcggttcgtggtggtttttatcgatgatattttgatttactcca 16726  T
Q  192 agtctgaggaagagcatgttgagcgtttga 221  Q
    ||||||| ||||| |||| ||||| |||||    
T  16725 agtctgaagaagaacatgctgagcatttga 16696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 11979 - 11826
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| ||||| |||||| | |||||||||   |||||||| |||||||| ||||||||  |  | |||||    
T  11979 ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 11880  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |||  ||| ||||||||||  |||| | ||| |||||| |||||||| |||||    
T  11879 taagaatgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaa 11826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 14601 - 14746
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||||||||||||| | || |||||| | | | ||||| |||| ||||| ||||| || || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    ||  ||| ||||| |||||||||| ||||| |||||| ||||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagt 14746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 217542 - 217687
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| ||||||||||||||||||   || |||||| | | | | |||||||| ||||| ||| | || |||||||||||| | || ||||    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||  || ||||| |||||||||| ||||| |||||| ||||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagt 217687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 6453 - 6604
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||| | || || |    
T  6453 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcgtttttggatcggttcgtggttgtttttatcgatgatattttgatttactcca 6552  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  6553 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 6604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 9122 - 8971
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| |||||||| |||||||| |||||||||||| | || || |    
T  9122 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactcca 9023  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  9022 agactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaa 8971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 6017 - 6156
Alignment:
Q  98 ccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctg 197  Q
    |||||||| |||||||||||||||||| | || || ||| | ||||| |||||||| ||||| ||||| || || ||||||||| | || || ||| |||    
T  6017 ccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaaggctg 6116  T
Q  198 aggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | ||||| |||| |||||  |||| |||||| ||||||||    
T  6117 aagaagaacatgctgagcaattgaagattgttttgcaagt 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 11361 - 11512
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || |||||||||||||| |||||||||||| | || || |    
T  11361 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcctttttggatcggttcgtggtggtgtttatcgatgatattttgatttactcca 11460  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  11461 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 50259 - 50123
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||||||||||   || |||||| | | | ||||||| || ||||| || || |  |||||||||||| | || || |||||||| ||||| |    
T  50259 tttatggagtacatgaatcacatctttcatgcatttttggatcggttcgtggttgttttcaatgatgatattttgatttactccaagtctgaagaagaac 50160  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| | | || |||||||| |||||    
T  50159 atgttgagcatttgaagctggttttgcaagtgttgaa 50123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 1169 - 1027
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||| ||||| ||||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||| | ||||| ||| |||| |    
T  1169 ggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaag 1070  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  || | | |||  ||||| ||||||||||||||    
T  1069 aagagcatgcagaacatctgaatattgtattgcaagtattgaa 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 5328 - 5151
Alignment:
Q  59 tatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtgg 158  Q
    ||||| ||||| |||||||| || || ||  | ||||| |||||||| || ||| ||||||||||| | || |||||| | ||| ||||||| |||||||    
T  5328 tatgaatattcagtgatgcctttcggtgttacgaatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtgg 5230  T
Q  159 tggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||| ||||| |||||| ||||||||    
T  5229 ttgtgttcattgacgatattttgatatactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagt 5151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 64639 - 64781
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| ||||||||||| |||||  |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||  | ||||| ||| |||| |    
T  64639 ggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaagactgaag 64738  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||||  |||| | ||| ||||||||||||||| |||||    
T  64739 aagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 64781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 84656 - 84786
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||| || |||||| | || |||||| ||||||| ||||||||||| || |||||||||||||||||| || | || || ||| |  |||| ||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  207 atgttgagcgtttgaggattgtgttgcaagt 237  Q
    |||  |||| |||||| ||||| ||||||||    
T  84756 atgccgagcatttgagaattgttttgcaagt 84786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 15343 - 15488
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||| |||||||||||||||||||| | || |||||| | | | |||||||||| ||| | ||||| || || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    || |||| ||||| || | ||||| ||||| |||||| ||||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagt 15488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 49290 - 49137
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||| | ||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||| | |||||    
T  49290 ctaatgcgcctggtgtgtttatggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 49191  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  || | | ||| |||||| |||||||| |||||    
T  49190 taagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaa 49137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 50996 - 50843
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| ||||||||||| |||||| | |||||||||   ||| |||| |||||||| ||||| || ||  | |||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggataaatttttggttgtgtttattgatgacatcttaatttattc 50897  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     | | |||| ||||||||||  |||| | ||| |||||| |||||||| |||||    
T  50896 tatgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaa 50843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 3659 - 3487
Alignment:
Q  49 gtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggat 148  Q
    ||||||||| |||||||||   || ||||| || || ||  ||||| |||| || || |||||||||||||||||| | || |||||| | | | |||||    
T  3659 gtatggacattatgagtataaagttatgcctttcggtgttactaattcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggat 3560  T
Q  149 cgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttga 221  Q
    ||||||||||| || || || |||||||||||| | || || || ||||| ||||| |||| ||||| |||||    
T  3559 cgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaacatgctgagcatttga 3487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 8541 - 8405
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||||||||| ||||| || ||||| |||||||||||| | || || |||||| ||||||| |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||  ||||| ||||| | | || |||||||| |||||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaa 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 5487 - 5623
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||  |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||| | ||||| ||| |||| |||||||    
T  5487 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 5586  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||  || | | ||| ||||||||||||||| |||||    
T  5587 atgcagaacatctgaagattgtgttgcaagtgttgaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 9918 - 10054
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    ||||||||||| |||||  |||| || ||| |||||||||||   |||||||| |||||||| ||||| || ||| | ||||| ||| |||| |||||||    
T  9918 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 10017  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||  || | | ||| ||||||||||||||| |||||    
T  10018 atgcagaacatctgaagattgtgttgcaagtgttgaa 10054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 931 - 1082
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | ||||||  |||||||| || || ||||||| ||||||| | || || |    
T  931 aatgcacctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcagtttgtggttgttttcatagatggtattttgatttactcca 1030  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  1031 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 1082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 6874 - 6783
Alignment:
Q  152 tttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||| |||||||||||||||| || | | ||| |||||| ||||||||||||||    
T  6874 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaggaagagcatgtagaacatctgaagattgtattgcaagtattgaa 6783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 16058 - 16189
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| ||||||||||| |||||||| || || ||  | || || |||||||| |||||| ||||||||||| | || |||||| | ||||| ||||    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  150 gttttgtggtggtgtttatagatgatattttg 181  Q
    |||| |||||  | || || ||||||||||||    
T  16158 gtttcgtggttatattcatcgatgatattttg 16189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 28751 - 28624
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  ||||||| || ||||| ||||||||||| ||||| ||||| || ||| | |||||||||     
T  28751 tatggacattatgagtataaggtgatgcctttcggtgttactaatgcgcctggtgtatttatggagtatatgaacagaattttccatgcctatctggata 28652  T
Q  150 gttttgtggtggtgtttatagatgatat 177  Q
      |||||||| |||||||| ||||||||    
T  28651 aatttgtggttgtgtttattgatgatat 28624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 38070 - 38221
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||||| | || |||||| | | | |||||||||| ||||| || || || |||||||||||| | || |  |    
T  38070 aatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactaca 38169  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  38170 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 38221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 22883 - 22744
Alignment:
Q  98 ccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctg 197  Q
    |||||||| |||||||||||||||||| | || |||||| | ||| ||||||  || ||||| ||||| ||  ||||||||||| | || || |||||||    
T  22883 ccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaagtctg 22784  T
Q  198 aggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    | ||||| ||   ||||| ||||| |||||| ||||||||    
T  22783 aagaagaacacactgagcatttgaagattgttttgcaagt 22744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 705 - 567
Alignment:
Q  71 gtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatag 170  Q
    ||||||||||| || ||  ||||||| || ||||| ||||||||||| ||||| ||||| || ||| ||||||| |||   |||||||| |||||||| |    
T  705 gtgatgccattcggtgttactaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctagataaatttgtggttgtgtttattg 606  T
Q  171 atgatattttggtgtattcgaagtctgaggaagagcatg 209  Q
    |||| || ||  | ||||| ||| |||| ||||||||||    
T  605 atgacatcttaatttattctaagactgaagaagagcatg 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 240
Target Start/End: Complemental strand, 24400 - 24250
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || || || ||||||||||| |||||  |||| || ||| ||| |||||||   |||||||| |||||||| ||||||||| || | |||||    
T  24400 ctaatgcgcctggggtgtttatggagtatatgaaccgaattttccatgcttctctggataaatttgtggttgtgtttattgatgatattctgatttattc 24301  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtatt 240  Q
     ||| |||| || |||||||  || | | ||| ||||||||||||||||||    
T  24300 taagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtatt 24250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 243
Target Start/End: Complemental strand, 3807 - 3614
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||||||||| |||   |||||||| || || ||  | |||||||| | ||| |||||||||||| ||||| | || |||||| | | | ||||||    
T  3807 tatggacactatgaatataaagtgatgcctttcggtgttacaaatgcacctgctgtgtttatggagtacgtgaatcgcatttttcatgcatttttggatc 3708  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| ||||| || || || ||||| |||||| | || || ||| |||||||||| |||| ||||| ||||| || ||| ||| |||| |||||    
T  3707 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgttttggaagtgttgaa 3614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 2043 - 1902
Alignment:
Q  102 gtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagga 201  Q
    |||| ||||||||||| ||||| ||||| || ||| |||||||||||    ||||||| |||||||| ||||| || ||  | ||||| ||| |||| ||    
T  2043 gtgtgtttatggagtatatgaacagaattttccatgcttatctggataaaattgtggttgtgtttattgatgacatcttaatttattctaagactgaaga 1944  T
Q  202 agagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||  |||| | ||| |||||| |||||||| |||||    
T  1943 agagcatgcagagcatctgaagattgtattgcaagtgttgaa 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 13456 - 13609
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||  | |||||||||   |||||||| |||||||| ||||| || ||| | |||||    
T  13456 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 13555  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| | || ||||||||||  || | | ||| |||||| ||||||||||||||    
T  13556 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaa 13609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 21635 - 21788
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||  | |||||||||   |||||||| |||||||| ||||| || ||| | |||||    
T  21635 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 21734  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| | || ||||||||||  || | | ||| |||||| ||||||||||||||    
T  21735 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaa 21788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 8928 - 9081
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| |||||| ||||||||||   ||| || ||| |||||||||||   |||||||| |||||||| |||||||| ||  | |||||    
T  8928 ctaatgcgcctggtgtgtttatgaagtacatgaacttaattttccatgcttatctggataaatttgtggtcgtgtttattgatgatatctttatttattc 9027  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | |||  ||| |||||||||| |||||    
T  9028 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaa 9081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 49995 - 50148
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||| | |||||||||   |||||||| |||||||| ||||| || ||  | |||||    
T  49995 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 50094  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  |||| | ||| ||||||||| ||||| |||||    
T  50095 taagactgaagaagagcatgcagagcatctgaagattgtgtttcaagtgttgaa 50148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 114745 - 114592
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| || ||||| || ||||||||||| |||||| |||| ||||||   |||||||| || || || ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     |   |||||||||||||||  || | | ||| |||||| ||||||||||||||    
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaa 114592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 935 - 799
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| || ||||| |||||||||||| | || |  |||||||| ||||| |    
T  935 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttgatttacttcaagtctgaagaagaac 836  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||| ||||| | | || |||||||| |||||    
T  835 atgctgagcatttgaagctggttttgcaagtgttgaa 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 7390 - 7254
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | | ||||| || ||||| || ||||| |||||||||||| | || || ||| | |||||||| |    
T  7390 tttatggagtacatgaatcgtatctttcatgcatttttagatcggttcgtggttgtttttattgatgatattttgatttactccaagaccgaggaagaac 7291  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||||| ||||| | | || |||||||| |||||    
T  7290 atgttgagcatttgaagttggttttgcaagtgttgaa 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 247
Target Start/End: Original strand, 8920 - 9060
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||   ||| || ||| ||| |||||||   ||||| ||||||||||| |||||||| ||  | ||||| |||  |||||| ||||    
T  8920 tttatggagtacatgaaccaaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatattaatatattccaagaatgaggaggagc 9019  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaaggaa 247  Q
    |||  |||| | |||| ||||| |||||||| |||||||||    
T  9020 atgcagagcatctgagaattgtattgcaagtgttgaaggaa 9060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 243 - 92
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || |||||||||||||||| | | || |||||| | | | ||||||| || ||||| || || || |||||||||||| | || || |    
T  243 aatgcacctggagtatttatggagtacatgattcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatattttgatttactcca 144  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||||||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  143 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaa 92  T

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Target: scaffold0270 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 6055 - 5904
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||| ||||||||| | ||  ||||  | | | | ||||| || ||||| ||||| || |||||||||||| | || ||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| || ||||| |||| ||||| ||||| |||||| || ||||| |||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaa 5904  T

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Target: scaffold0270; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 13185 - 13034
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    ||||| |||||||| |||||||| ||||||||| | ||  ||||  | | | | ||||| || ||||| ||||| || |||||||||||| | || ||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    |||| || ||||| |||| ||||| ||||| |||||| || ||||| |||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaa 13034  T

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Target: scaffold0228 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 243
Target Start/End: Complemental strand, 20466 - 20271
Alignment:
Q  48 ggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctgga 147  Q
    |||||||||| |||||||||   |||||||| || || ||  | ||||||||  | || ||||||||||||||||||   || |||||| | | | ||||    
T  20466 ggtatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctagagtgtttatggagtacatgaatcatatctttcatgcatttttgga 20367  T
Q  148 tcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| || ||||| || ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||| ||||| | | || |||||||| |||||    
T  20366 tcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaa 20271  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 25234 - 25155
Alignment:
Q  155 gtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgca 234  Q
    |||||||| |||||||||||||||||| | ||||| ||| |||| || |||||||  ||||  |||| ||||||||||||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgca 25155  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 1166 - 1027
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||| || |||||| | || |||||| ||||| ||||||  ||||| || |||||||||||||||||| || | || || ||| | || || || |    
T  1166 tttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgtttatagatgatattatgatatactctaagaccgaagaggaac 1067  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    |||  |||| |||||| ||||| ||||||||| |||||||    
T  1066 atgcggagcatttgagaattgttttgcaagtactgaagga 1027  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 243
Target Start/End: Complemental strand, 2605 - 2454
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||| |||||| | || || ||| | | | ||||||| || ||||| |||||||| || ||||||||| | || || |    
T  2605 aatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggttcgtggttgtgtttatcgacgatattttgatttactcca 2506  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    || |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  2505 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 28586 - 28736
Alignment:
Q  93 atgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaa 192  Q
    ||||||| || || ||||||||||| |||||| | || || ||| | | | |||||||||| ||||| || ||||| || ||||||||| | || || ||    
T  28586 atgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcgtttcgtggttgtttttatcgacgatattttgatttactccaa 28685  T
Q  193 gtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    | |||| ||||| |||| ||||| | ||| |||||| |||||||| |||||    
T  28686 gactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 28736  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaa 123  Q
    ||||| || ||||||||||| |||||||| |||||||| || || || ||||| || ||||||||||| |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 20786 - 20641
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||||||||||   || |||||| | | | ||||||| |||||||| || || || |||||||||||  | || || |    
T  20786 aatgcacctggagtatttatggagtacatgaatcacatctttcatgcatttttggatcgatttgtggttgttttcattgatgatattttaatttactcta 20687  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    || |||| ||||| |||| ||||| | ||| |||||| ||||||||    
T  20686 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagt 20641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 36210 - 36065
Alignment:
Q  92 aatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcga 191  Q
    |||||||| || || ||||||||||||||||||   || |||||| | | | ||||||| |||||||| || || || |||||||||||  | || || |    
T  36210 aatgcacctggagtatttatggagtacatgaatcacatctttcatgcatttttggatcgatttgtggttgttttcattgatgatattttaatttactcta 36111  T
Q  192 agtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagt 237  Q
    || |||| ||||| |||| ||||| | ||| |||||| ||||||||    
T  36110 agactgaagaagaacatgctgagcatctgaagattgtcttgcaagt 36065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 2902 - 2749
Alignment:
Q  90 ctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattc 189  Q
    ||||||| || ||||| ||||||||||| |||||  |||| || ||| |||| ||||||   || ||||| |||||||| ||||| || ||| | |||||    
T  2902 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 2803  T
Q  190 gaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
     ||| |||| ||||||||||  || | | ||| |||||| |||||||| |||||    
T  2802 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaa 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 115172 - 115257
Alignment:
Q  161 gtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcgtttgaggattgtgttgcaagtattgaagga 246  Q
    ||||| || |||||||||||| | || || |||||||| ||||| |||| ||||| ||||| |||||| ||||||||  |||||||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaagga 115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 69545 - 69412
Alignment:
Q  101 ggtgtctttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgagg 200  Q
    ||||| || |||||||| |||||  |||| || ||| ||| |||||||   || |||||||| ||||| |||||||||||| | ||||| ||| |||| |    
T  69545 ggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattctaagactgaag 69446  T
Q  201 aagagcatgttgagcgtttgaggattgtgttgca 234  Q
    | |||||||  || || |||| ||||||||||||    
T  69445 aggagcatgcagaacgcttgaagattgtgttgca 69412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 859 - 1007
Alignment:
Q  50 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggagtacatgaatagaatatttcatccttatctggatc 149  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||||||  | || |||||||||||||||||| | || |||||| | | | ||||||    
T  859 tatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctagagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 958  T
Q  150 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctga 198  Q
    |||| ||||| || || || |||||||||||| | || || ||||||||    
T  959 gtttcgtggttgttttcattgatgatattttgatttactccaagtctga 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 13348 - 13484
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | ||||||| || ||||| |  || | ||||||||||||| | || || |||||||| ||||| |    
T  13348 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgatttaaaagatgatattttgatttactccaagtctgaagaagaac 13447  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||| ||||| | | || |||||||| |||||    
T  13448 atgatgagcatttgaagctggttttgcaagtgttgaa 13484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 25082 - 25218
Alignment:
Q  107 tttatggagtacatgaatagaatatttcatccttatctggatcgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagc 206  Q
    |||||||||||||||||| | || |||||| | | | |||||||||| |||||  | ||||| || ||||||||| | || || |||  ||||||||| |    
T  25082 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttctttttattgacgatattttgatttactccaagattgaggaagaac 25181  T
Q  207 atgttgagcgtttgaggattgtgttgcaagtattgaa 243  Q
    ||| ||||| ||||| | | || |||||||| |||||    
T  25182 atgctgagcatttgaagctggttttgcaagtgttgaa 25218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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