View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20068_high_3 (Length: 657)

Name: NF20068_high_3
Description: NF20068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20068_high_3
NF20068_high_3
[»] chr8 (5 HSPs)
chr8 (16-348)||(38621318-38621649)
chr8 (412-641)||(38621713-38621944)
chr8 (218-330)||(28284497-28284617)
chr8 (250-326)||(21269005-21269081)
chr8 (221-330)||(17865043-17865159)
[»] chr2 (7 HSPs)
chr2 (170-348)||(21649602-21649789)
chr2 (203-346)||(25631313-25631456)
chr2 (219-335)||(37127872-37127988)
chr2 (219-335)||(815622-815746)
chr2 (212-326)||(33945978-33946100)
chr2 (279-335)||(21485298-21485354)
chr2 (104-148)||(37127760-37127804)
[»] chr4 (8 HSPs)
chr4 (207-335)||(20516711-20516839)
chr4 (91-330)||(34953409-34953655)
chr4 (218-335)||(40602783-40602908)
chr4 (287-335)||(56084154-56084202)
chr4 (93-155)||(20516889-20516951)
chr4 (414-524)||(20516515-20516627)
chr4 (212-256)||(37397879-37397923)
chr4 (95-151)||(49604604-49604659)
[»] scaffold0048 (2 HSPs)
scaffold0048 (91-330)||(51886-52133)
scaffold0048 (91-158)||(65025-65092)
[»] chr7 (7 HSPs)
chr7 (95-330)||(3600819-3601063)
chr7 (213-335)||(19646987-19647113)
chr7 (91-330)||(31326466-31326711)
chr7 (220-330)||(18500378-18500495)
chr7 (93-158)||(19647169-19647234)
chr7 (294-335)||(1906583-1906624)
chr7 (414-490)||(3601148-3601225)
[»] chr1 (6 HSPs)
chr1 (207-330)||(34549901-34550032)
chr1 (443-531)||(7134389-7134478)
chr1 (218-268)||(41933443-41933493)
chr1 (218-330)||(48892146-48892262)
chr1 (94-151)||(41367024-41367080)
chr1 (218-268)||(41932521-41932571)
[»] scaffold0001 (1 HSPs)
scaffold0001 (107-335)||(427052-427279)
[»] chr6 (2 HSPs)
chr6 (94-330)||(17519900-17520143)
chr6 (294-330)||(6837254-6837290)
[»] chr3 (6 HSPs)
chr3 (91-317)||(27035631-27035856)
chr3 (91-317)||(27024375-27024600)
chr3 (212-308)||(12717702-12717798)
chr3 (279-330)||(33843563-33843614)
chr3 (431-524)||(25214729-25214823)
chr3 (224-254)||(49442195-49442225)
[»] chr5 (4 HSPs)
chr5 (203-273)||(32695141-32695211)
chr5 (265-317)||(23344810-23344862)
chr5 (203-269)||(28443219-28443285)
chr5 (224-273)||(16490110-16490159)
[»] scaffold0160 (2 HSPs)
scaffold0160 (265-330)||(17266-17331)
scaffold0160 (91-151)||(17134-17194)
[»] scaffold0210 (1 HSPs)
scaffold0210 (212-327)||(8083-8198)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 348
Target Start/End: Original strand, 38621318 - 38621649
Alignment:
Q  16 atcatagaagattacgttgtttgtgttgttttaagctgtttacttannnnnnnnatgcctttttnnnnnnnnnnntctatgtcatctgccatgaaaaccc 115  Q
    |||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||           ||||||||||| |||||||||||||    
T  38621318 atcatagaagattacgttgtttgtgttgttttaagctgttcacttattttttt-atgcctttttaattttttttttctatgtcatccgccatgaaaaccc 38621416  T
Q  116 tccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattcgaatacacccaatttatttgaacgg 215  Q
    ||||||||||||||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38621417 tccaaaaacacaatccgatgttgtttggattatatatttcgaactagttctagacaatttcagattataaaattcgaatacacccaatttatttgaacgg 38621516  T
Q  216 ttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgt 315  Q
    |||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  38621517 ttgcgtttcaccaaaggtttagtcagtttgcggtatgtttaatgaatttttggacggtggaaaatgttttatttgatagtagttatgatctaggactcgt 38621616  T
Q  316 ttaagactataaataagcttctatgttcatcaa 348  Q
    ||||||||||||||||| |||||||||||||||    
T  38621617 ttaagactataaataagtttctatgttcatcaa 38621649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 412 - 641
Target Start/End: Original strand, 38621713 - 38621944
Alignment:
Q  412 aatgtttaaggtgt-atggtcattgttgaccgttcataaaatctctacaattgttttggagtttatacggagattttacggg-gttagtagagacatttg 509  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  38621713 aatgtttaagatgtcatcgtcattgttgaccgttcataaaatctctacaattgttttggagtttatacggagattttacgacagttagtagagacatttg 38621812  T
Q  510 acatcaaatacaacactaaaaacagtagttcgaaaaagttaagatttttataatctggaaattgctaacagattatataattcaagtgagaggtattttt 609  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38621813 acatcaaatacaacactaaaaattatagttcgaaaaagttaagatttttataatctggaaattgctaacagattatataattcaagtgagaggtattttt 38621912  T
Q  610 gtcatttttgcatgggtgaaaaaagtaataat 641  Q
    ||||||||||||||||||||||||||||||||    
T  38621913 gtcatttttgcatgggtgaaaaaagtaataat 38621944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 28284617 - 28284497
Alignment:
Q  218 gcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacgttttatttgatagtagttatgatctagg 309  Q
    |||||||||||||| ||||||||||| | ||||| |||||| ||||||||||||||        ||||||||||||||||||  ||||||||||||||||    
T  28284617 gcgtttcaccaaagttttagacggttagtggtgtatttaatgaatttttggacggttggacggtggaaaacgttttatttgaccgtagttatgatctagg 28284518  T
Q  310 acttgtttaagactataaata 330  Q
    || ||||| || || ||||||    
T  28284517 acatgttttaggctgtaaata 28284497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 21269005 - 21269081
Alignment:
Q  250 gtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgtttaagactata 326  Q
    |||||||||  |||||| ||||| |||| |||||||||||||  ||| ||||||||||||||  |||||||| ||||    
T  21269005 gtgtttaatgcatttttagacggcggaacacgttttatttgactgtaattatgatctaggacaggtttaagattata 21269081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 17865043 - 17865159
Alignment:
Q  221 tttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttgg-------acggtggaaaacgttttatttgatagtagttatgatctaggactt 313  Q
    ||||||| |||||||  |||||||| || |||||||||| ||||||||       ||  ||||||||||||  |||||| ||||||||  |||| ||||     
T  17865043 tttcacccaaggtttgaacggtttgtggcgtgtttaattcatttttggttgttgaactatggaaaacgtttcctttgattgtagttatagtctatgacta 17865142  T
Q  314 gtttaagactataaata 330  Q
    |||||||||||||||||    
T  17865143 gtttaagactataaata 17865159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 21649602 - 21649789
Alignment:
Q  170 caatttcagattataaaattcgaatacacccaatttatttgaacggttgcgtttca-ccaaaggtttagacggtttgcggtgtgtttaattaattt---- 264  Q
    ||||||||||||||| ||||||||||||  || ||| |||| | ||| |||||||| |||||| ||| ||||||||| |||||||||||| |||||        
T  21649602 caatttcagattatataattcgaatacattcagtttttttggatggtggcgtttcatccaaagatttggacggtttgtggtgtgtttaatgaatttttgg 21649701  T
Q  265 ----ttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgtttaagactataaataagcttctatgttcatcaa 348  Q
        ||||| ||||||||||| |||||||||  |||||||| |||||||||||||||||| |||||||||  |||| || ||||||||    
T  21649702 atggttggaaggtggaaaacgctttatttgactgtagttataatctaggacttgtttaaggctataaatagtcttccatcttcatcaa 21649789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 203 - 346
Target Start/End: Original strand, 25631313 - 25631456
Alignment:
Q  203 tttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatg 302  Q
    |||||||| || || |||||||||||||||||| ||| ||| | ||||||||||||  ||||||| ||| |||||||||| | |||| || |||||||||    
T  25631313 tttatttggaccgtagcgtttcaccaaaggtttggacagttagtggtgtgtttaatgcatttttgaacgttggaaaacgtgtcatttaattgtagttatg 25631412  T
Q  303 atctaggacttgtttaagactataaataagcttctatgttcatc 346  Q
     |||||||||||||||   ||||||||||||||| || ||||||    
T  25631413 ttctaggacttgtttacagctataaataagcttccattttcatc 25631456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 335
Target Start/End: Original strand, 37127872 - 37127988
Alignment:
Q  219 cgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgttta 318  Q
    ||||||||||||||||| ||||||| | || |||||||||  |||||||||| |||||| || ||||||||||  ||| |||| || ||||||||||||     
T  37127872 cgtttcaccaaaggttttgacggttagtggagtgtttaatgcatttttggacagtggaacacattttatttgactgtatttatcatataggacttgtttt 37127971  T
Q  319 agactataaataagctt 335  Q
    || ||||||||||||||    
T  37127972 aggctataaataagctt 37127988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 815746 - 815622
Alignment:
Q  219 cgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacgg--------tggaaaacgttttatttgatagtagttatgatctagga 310  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||| |||        || |||||||||  |||||  ||||||||| |||||||    
T  815746 cgtttcaccaaaggtttagacggtttgtggtgtgtttaatgcatttttggtcggttggaccatgaaaaacgtttcctttgaatgtagttatggtctagga 815647  T
Q  311 cttgtttaagactataaataagctt 335  Q
    |||||||||||||||||||| ||||    
T  815646 cttgtttaagactataaataggctt 815622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 33946100 - 33945978
Alignment:
Q  212 acggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacgttttatttgatagtagttatga 303  Q
    ||||| ||| ||||||||| ||||||||| |||| |||| ||||||  ||||||||||||||        ||||||| ||||||||||  ||||||||||    
T  33946100 acggtggcgattcaccaaatgtttagacgatttgtggtgcgtttaaagaatttttggacggttggacaatggaaaacattttatttgactgtagttatga 33946001  T
Q  304 tctaggacttgtttaagactata 326  Q
    |||||||||||||| || |||||    
T  33946000 tctaggacttgttttaggctata 33945978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 21485298 - 21485354
Alignment:
Q  279 acgttttatttgatagtagttatgatctaggacttgtttaagactataaataagctt 335  Q
    |||||||  ||||| ||| |||||| ||||||||||||| || ||||||||||||||    
T  21485298 acgtttttattgattgtacttatgacctaggacttgttttaggctataaataagctt 21485354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 37127760 - 37127804
Alignment:
Q  104 ccatgaaaaccctccaaaaacacaatctggtgctgtttggattat 148  Q
    ||||||||| |||||||||||||  ||||||| ||||||||||||    
T  37127760 ccatgaaaagcctccaaaaacacggtctggtgatgtttggattat 37127804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 7e-26; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 20516839 - 20516711
Alignment:
Q  207 tttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatct 306  Q
    |||| ||||| |||||||||||||||||| ||||||| | | |||||||||| |||||||||| ||||||| |||||||||||||  |||||||  ||||    
T  20516839 tttggacggtggcgtttcaccaaaggtttggacggttagtgatgtgtttaatgaatttttggatggtggaacacgttttatttgactgtagttaatatct 20516740  T
Q  307 aggacttgtttaagactataaataagctt 335  Q
    |||| |||||| || ||||||||| ||||    
T  20516739 aggatttgttttaggctataaataggctt 20516711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 91 - 330
Target Start/End: Original strand, 34953409 - 34953655
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattc 190  Q
    ||||||| |||  |||||||||||||||||||||| ||| ||| || ||||| |||||||| | |||| |  || |||||  |||||||||||| ||| |    
T  34953409 tctatgttatcatccatgaaaaccctccaaaaacataatatggggc-gtttgaattatataattcgaatttgttttagactgtttcagattatataatcc 34953507  T
Q  191 gaatacacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacg--------gtggaaaacgt 282  Q
    ||| || | ||| || || | ||| | |||||||||||| ||||| ||||||| | || |||||||||  |||||||||||        |||||| ||||    
T  34953508 gaacaccctcaaatttttaggacgctggcgtttcaccaatggtttggacggttagtggagtgtttaatgcatttttggacggttggattgtggaacacgt 34953607  T
Q  283 tttatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    |||||||||  |||||||||||||||||||| ||| || |||||||||    
T  34953608 tttatttgactgtagttatgatctaggacttattttaggctataaata 34953655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 40602908 - 40602783
Alignment:
Q  218 gcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacgttttatttgatagtagttatgatctagg 309  Q
    |||||||||||||||||| ||||||| | || ||||||||| | ||||||||||||        |||| || |||||||| |   |||||||||||||||    
T  40602908 gcgtttcaccaaaggtttggacggttagtggggtgtttaatgattttttggacggttagacggtggaacacattttatttaactatagttatgatctagg 40602809  T
Q  310 acttgtttaagactataaataagctt 335  Q
    ||||||||||  ||||||||| ||||    
T  40602808 acttgtttaatgctataaataggctt 40602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 56084202 - 56084154
Alignment:
Q  287 tttgatagtagttatgatctaggacttgtttaagactataaataagctt 335  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  56084202 tttgattgtagttatgatctaggacttgtttaaggctataaatatgctt 56084154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 20516951 - 20516889
Alignment:
Q  93 tatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattcc 155  Q
    ||||||||||| |||||||||||||||| |||||| |||||  | ||| |||||||||| |||    
T  20516951 tatgtcatctgtcatgaaaaccctccaataacacagtctggaccggttcggattatataatcc 20516889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 524
Target Start/End: Complemental strand, 20516627 - 20516515
Alignment:
Q  414 tgtttaaggtgt-atggtcattgttgaccgttcataaaatctctacaattgttttggagtttatacggagattttacg-gggttagtagagacatttgac 511  Q
    |||||| ||||| ||||||||||||||||||||||| ||||| | |||||| |||| || |||| | | |||| ||||  ||| || ||||||  |||||    
T  20516627 tgtttatggtgtcatggtcattgttgaccgttcatataatctatgcaattgctttgcagcttatgcagggattatacgacggtcagcagagacccttgac 20516528  T
Q  512 atcaaatacaaca 524  Q
    |||||||| ||||    
T  20516527 atcaaataaaaca 20516515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 37397879 - 37397923
Alignment:
Q  212 acggttgcgtttcaccaaaggtttagacggtttgcggtgtgttta 256  Q
    ||||| ||||| |||||||||||| ||||||||| ||||||||||    
T  37397879 acggtggcgttacaccaaaggttttgacggtttgtggtgtgttta 37397923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 49604659 - 49604604
Alignment:
Q  95 tgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatata 151  Q
    |||||||  |||||||||||||||||||  ||||||||||||| ||||||| |||||    
T  49604659 tgtcatcatccatgaaaaccctccaaaat-acaatctggtgctatttggataatata 49604604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 91 - 330
Target Start/End: Complemental strand, 52133 - 51886
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattc 190  Q
    ||||||| |||  |||| ||||||||||||||||||| ||| |||| |||||||||||||| |||||| |  || | | ||| ||| ||||||| |||||    
T  52133 tctatgttatcctccataaaaaccctccaaaaacacagtctagtgccgtttggattatataatccgaaattctttt-gtcaaattctgattatataattc 52035  T
Q  191 gaatacacccaatttattt-gaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacg 281  Q
    |||||||| || ||| ||| | ||||| ||||| |||||||||||| ||||||| | |  ||||||| |  |||||||||| ||        |||| ||     
T  52034 gaatacactcagttttttttggacggtggcgttccaccaaaggtttggacggttagtgaagtgtttattgcatttttggacagttggatgatggaacaca 51935  T
Q  282 ttttatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    ||||||||||| |||||||||||||||||||||||| || |||||||||    
T  51934 ttttatttgattgtagttatgatctaggacttgttttaggctataaata 51886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 65092 - 65025
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaa 158  Q
    ||||||| |||  |||| ||||||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  65092 tctatgttatcctccataaaaaccctccaaaaacacagtctagtgccgtttggattatataatccgaa 65025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 95 - 330
Target Start/End: Original strand, 3600819 - 3601063
Alignment:
Q  95 tgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattcgaat 194  Q
    ||||||| |||||||||||||||| |||||||| ||||  ||||||||||||||||| || ||| |   | | |||| |||||||||||| ||| ||||     
T  3600819 tgtcatccgccatgaaaaccctcccaaaacacagtctgtggctgtttggattatataatctgaagtttgtttggacagtttcagattatataatccgaaa 3600918  T
Q  195 acacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaattttt----------ggacggtggaaaacgttt 284  Q
    || | || ||| |||| ||||| ||||||  | |||||||| ||||||| | |||||||||||| |||||||          ||||||||||||| ||||    
T  3600919 actctcagttt-tttggacggtggcgtttttcaaaaggtttggacggttagtggtgtgtttaatgaatttttggacagttttggacggtggaaaatgttt 3601017  T
Q  285 tatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    ||||||| |||| |||||||| |||| |||||| || |||||||||    
T  3601018 tatttgacagtaattatgatcaaggatttgttttaggctataaata 3601063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 19647113 - 19646987
Alignment:
Q  213 cggttgcgtttcaccaaaggtttagacggtttgcggtgtgttta----attaatttttggacggtggaaaacgttttatttgatagtagttatgatctag 308  Q
    |||| |||||||||||||||||| ||  ||| | || |||||||    ||||||||||| ||||||||| |||||||| ||||  ||| |||||||||||    
T  19647113 cggtggcgtttcaccaaaggtttggatagttagtggagtgtttaatgcattaatttttgtacggtggaacacgttttacttgactgtaattatgatctag 19647014  T
Q  309 gacttgtttaagactataaataagctt 335  Q
    |||| ||||||||||||||||| ||||    
T  19647013 gactggtttaagactataaatatgctt 19646987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 330
Target Start/End: Original strand, 31326466 - 31326711
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattc 190  Q
    |||||||||||  |||||||||||| | ||||||||||||||||| |||||| ||||||||  ||||| |  || || |||  ||||||||||| |||      
T  31326466 tctatgtcatcatccatgaaaacccac-aaaaacacaatctggtgttgtttgaattatataacccgaatttgttttaaacatgttcagattatataatct 31326564  T
Q  191 gaatacacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatt--------tttggacggtggaaaacgt 282  Q
    ||| || ||  | || ||| ||||||  |||||||||||| |||| ||||||| | |||||||||||| ||||         ||| ||||| |||||  |    
T  31326565 gaa-acccctcagtttttttaacggtgacgtttcaccaaatgtttggacggttagaggtgtgtttaatgaattgttaaacgattgaacggtagaaaatat 31326663  T
Q  283 tttatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    |||||||||  ||| ||||||| |||||||||||| | ||||||||||    
T  31326664 tttatttgactgtaattatgatttaggacttgttttatactataaata 31326711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 18500495 - 18500378
Alignment:
Q  220 gtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtgga-------aaacgttttatttgatagtagttatgatctaggact 312  Q
    |||||||||||||||| |||| |||| ||||||||||||  ||||||||  | ||||       ||||||||  |||||  |||||||||||||||||||    
T  18500495 gtttcaccaaaggtttggacgatttgtggtgtgtttaatgcatttttggtggttggaccatgggaaacgtttcgtttgaccgtagttatgatctaggact 18500396  T
Q  313 tgtttaagactataaata 330  Q
     |||||||||||| ||||    
T  18500395 ggtttaagactattaata 18500378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 19647234 - 19647169
Alignment:
Q  93 tatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaa 158  Q
    |||||||| | |||||||||||||||| ||||||| ||||||| ||||  ||||||||| ||||||    
T  19647234 tatgtcatattccatgaaaaccctccacaaacacattctggtgttgttcagattatataatccgaa 19647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 1906583 - 1906624
Alignment:
Q  294 gtagttatgatctaggacttgtttaagactataaataagctt 335  Q
    |||||| ||||||||||| |||||||||||||||||| ||||    
T  1906583 gtagttgtgatctaggacatgtttaagactataaataggctt 1906624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 490
Target Start/End: Original strand, 3601148 - 3601225
Alignment:
Q  414 tgtttaaggtgt-atggtcattgttgaccgttcataaaatctctacaattgttttggagtttatacggagattttacg 490  Q
    |||||| ||||| |||||||||| |||||||||||| ||||| | |||||| |||| || |||| |||||||| ||||    
T  3601148 tgtttatggtgtcatggtcattgatgaccgttcatataatctttgcaattgctttgcagcttatgcggagattatacg 3601225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 207 - 330
Target Start/End: Complemental strand, 34550032 - 34549901
Alignment:
Q  207 tttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacgttttatttgatagtagt 298  Q
    |||| ||||| ||||||||| |||||||| ||||||| | |||||||||||| |||||||| |||||        |||||||||||||||| || |||||    
T  34550032 tttggacggtggcgtttcactaaaggtttggacggttagtggtgtgtttaatgaatttttgaacggttggatggtggaaaacgttttatttaattgtagt 34549933  T
Q  299 tatgatctaggacttgtttaagactataaata 330  Q
    ||||||||||||||||||| || |||||||||    
T  34549932 tatgatctaggacttgttttaggctataaata 34549901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 443 - 531
Target Start/End: Complemental strand, 7134478 - 7134389
Alignment:
Q  443 ttcataaaatctctacaattgttttggagtttatacggagattttacg-gggttagtagagacatttgacatcaaatacaacactaaaaa 531  Q
    |||||| ||||||| ||||||||||| | ||||||||| |||||||||  ||| || |||||| ||| |||||||||||||||| |||||    
T  7134478 ttcatagaatctctgcaattgttttgcaatttatacggggattttacgacggtcagcagagacctttaacatcaaatacaacacaaaaaa 7134389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 41933443 - 41933493
Alignment:
Q  218 gcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttgg 268  Q
    |||||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  41933443 gcgtttcaccaaaggtttggacggtttgtggtgtgtttaatccatttttgg 41933493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 48892262 - 48892146
Alignment:
Q  218 gcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt--------ggaaaacgttttatttgatagtagttatgatctagg 309  Q
    |||||||||||||| |||||||||||    |||||||||||  |||||||||||||        ||||||||| | ||||||  |||||||||||||| |    
T  48892262 gcgtttcaccaaagatttagacggtt----gtgtgtttaatgcatttttggacggttggggcatggaaaacgtatcatttgactgtagttatgatctatg 48892167  T
Q  310 acttgtttaagactataaata 330  Q
    |||||||||||  ||||||||    
T  48892166 acttgtttaaggttataaata 48892146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 41367080 - 41367024
Alignment:
Q  94 atgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatata 151  Q
    ||||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  41367080 atgtcatattccatgaaaacactccaaaaacac-atctggtgctgtttgtattatata 41367024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 41932521 - 41932571
Alignment:
Q  218 gcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttgg 268  Q
    |||||||||||||||||  ||||||||| ||||||||||||  ||||||||    
T  41932521 gcgtttcaccaaaggttgggacggtttgtggtgtgtttaatgcatttttgg 41932571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 107 - 335
Target Start/End: Original strand, 427052 - 427279
Alignment:
Q  107 tgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattcgaatacacccaattta 206  Q
    ||||||||||  ||||||||| ||||||| |||| |||||||||| |||||| |  || |||  | |||||||||||| |||||||| |  |  | |||     
T  427052 tgaaaaccctaaaaaaacacattctggtgttgttcggattatataatccgaatttttt-tagttagtttcagattatataattcgaaaaaccttagtttt 427150  T
Q  207 tttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatct 306  Q
    |||| ||| | |||||||||||||||||  | ||||| | ||  ||||||||  |||||||||| |||||| |||||||||||||  | | |||||||||    
T  427151 tttggacgatggcgtttcaccaaaggttaggccggttagtggcatgtttaatacatttttggacagtggaacacgttttatttgactgcacttatgatct 427250  T
Q  307 aggacttgtttaagactataaataagctt 335  Q
    |||| | || |||| ||||||||| ||||    
T  427251 aggaatggtctaaggctataaataggctt 427279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 94 - 330
Target Start/End: Complemental strand, 17520143 - 17519900
Alignment:
Q  94 atgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattcgaa 193  Q
    ||||||||  ||| |||||||||||||||||| |  |||| ||||||||||||||||| |||||| |  || |||| |  ||  ||||||| |||  |||    
T  17520143 atgtcatcatccacgaaaaccctccaaaaacataggctggggctgtttggattatataatccgaatttgttttagataggtttggattatataatctgaa 17520044  T
Q  194 tacacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttgg--------acggtggaaaacgtttt 285  Q
     || | || ||| ||| | |||| |||||||||||||||||| || |||| | |||||||||||| |||||||||        |||||| ||||  ||||    
T  17520043 aaccctcagtttttttta-cggtagcgtttcaccaaaggtttggatggttagtggtgtgtttaatgaatttttggtcggttggacggtgaaaaatatttt 17519945  T
Q  286 atttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    ||||||  |||||||||||||| ||||||||| || |||||||||    
T  17519944 atttgactgtagttatgatctatgacttgttttaggctataaata 17519900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 6837254 - 6837290
Alignment:
Q  294 gtagttatgatctaggacttgtttaagactataaata 330  Q
    |||||||||||||||||||  ||||||||||||||||    
T  6837254 gtagttatgatctaggactgatttaagactataaata 6837290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 91 - 317
Target Start/End: Complemental strand, 27035856 - 27035631
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattctagacaatttcagattataaaattc 190  Q
    ||||||| |||| ||||||||||| || ||||||||||||||||| ||||| ||||||||| ||| ||  ||||   | || |||  ||||||| |||      
T  27035856 tctatgttatcttccatgaaaaccttctaaaaacacaatctggtgatgtttagattatataatcc-aaaaaatttatgtcagttttggattatataatct 27035758  T
Q  191 gaatacacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttg 290  Q
    |||||||  || ||| |||| ||||| || ||||||||||| ||| |||| || |  | | |||||||  |||||| ||| ||||||  ||||||||||     
T  27035757 gaatacaatcagtttttttggacggtggcatttcaccaaagatttggacgattagtagagagtttaatgcatttttagacagtggaacgcgttttatttt 27035658  T
Q  291 atagtagttatgatctaggacttgttt 317  Q
    |  ||||||||||||||||||||||||    
T  27035657 actgtagttatgatctaggacttgttt 27035631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 317
Target Start/End: Complemental strand, 27024600 - 27024375
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatatattccgaactaattcta-gacaatttcagattataaaatt 189  Q
    ||||||| |||| ||||||||||| || |||||||| || ||||| ||||| ||||||||| ||| ||  |||| || | || |||  ||||||| |||     
T  27024600 tctatgttatcttccatgaaaaccttctaaaaacacgatatggtgatgtttagattatataatccaaa--aattttatgtcagttttggattatataatc 27024503  T
Q  190 cgaatacacccaatttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttattt 289  Q
    ||||||||  || ||| |||| ||||| || ||||||||||| ||| |||| || |    | |||||||  |||||| ||| ||||||  |||||| |||    
T  27024502 cgaatacaatcagtttttttggacggtggcatttcaccaaagatttggacgattagtatagagtttaatgcatttttagacagtggaacgcgttttgttt 27024403  T
Q  290 gatagtagttatgatctaggacttgttt 317  Q
     |  ||||||||||||||||||||||||    
T  27024402 tactgtagttatgatctaggacttgttt 27024375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 12717798 - 12717702
Alignment:
Q  212 acggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatctag 308  Q
    ||||| |||||||| |||||| || | | ||| | || |||||||||  |||||| |||||||||| |||||||||||||  ||| |||||||||||    
T  12717798 acggtggcgtttcatcaaaggattggccagttcgtggagtgtttaatgcatttttagacggtggaacacgttttatttgactgtatttatgatctag 12717702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 33843614 - 33843563
Alignment:
Q  279 acgttttatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    |||||||||||||  || ||||||||||||||||||||| || |||||||||    
T  33843614 acgttttatttgactgtggttatgatctaggacttgttttaggctataaata 33843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 524
Target Start/End: Original strand, 25214729 - 25214823
Alignment:
Q  431 cattgttgaccgttcataaaatctctacaattgttttggagtttatacggagattttacgg-ggttagtagagacatttgacatcaaatacaaca 524  Q
    |||||||||||||||||| ||||  | |||||| |||| || |||| ||| |||| ||||  ||||||  ||||| |||||||||||||||||||    
T  25214729 cattgttgaccgttcatagaatccttgcaattgctttgcagcttatgcggggattctacgacggttagccgagacctttgacatcaaatacaaca 25214823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 49442225 - 49442195
Alignment:
Q  224 caccaaaggtttagacggtttgcggtgtgtt 254  Q
    |||||||||||||||||||||||||||||||    
T  49442225 caccaaaggtttagacggtttgcggtgtgtt 49442195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 32695211 - 32695141
Alignment:
Q  203 tttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt 273  Q
    |||||| |||||||  |||||||||||| |||| ||||||||| ||||| ||||||  |||||||||||||    
T  32695211 tttattcgaacggtgacgtttcaccaaaagtttggacggtttgtggtgtatttaatgcatttttggacggt 32695141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 23344810 - 23344862
Alignment:
Q  265 ttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgttt 317  Q
    ||||||||||||| ||||||||||  |  ||||||||||||||||||||||||    
T  23344810 ttggacggtggaacacgttttattctactgtagttatgatctaggacttgttt 23344862  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 28443285 - 28443219
Alignment:
Q  203 tttatttgaacggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttgga 269  Q
    |||||||| ||||| |||||| |||||| |||| |||| |||| ||||||||||||  |||||||||    
T  28443285 tttatttggacggtggcgtttaaccaaatgtttggacgatttgtggtgtgtttaatgcatttttgga 28443219  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 16490110 - 16490159
Alignment:
Q  224 caccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggt 273  Q
    |||||||||||| ||||||||| ||||||||||||  |||||||| ||||    
T  16490110 caccaaaggttttgacggtttgtggtgtgtttaatgtatttttggtcggt 16490159  T

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Target: scaffold0160 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 17266 - 17331
Alignment:
Q  265 ttggacggtggaaaacgttttatttgatagtagttatgatctaggacttgtttaagactataaata 330  Q
    ||||||||||||| |  ||||||||||   ||||||||||||||||||||||| || |||||||||    
T  17266 ttggacggtggaacatattttatttgactatagttatgatctaggacttgttttaggctataaata 17331  T

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Target: scaffold0160; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 17134 - 17194
Alignment:
Q  91 tctatgtcatctgccatgaaaaccctccaaaaacacaatctggtgctgtttggattatata 151  Q
    |||||||||| | | || |||||||||||||| |||| ||||||| |||||||||||||||    
T  17134 tctatgtcatattcgataaaaaccctccaaaatcacagtctggtgttgtttggattatata 17194  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 8083 - 8198
Alignment:
Q  212 acggttgcgtttcaccaaaggtttagacggtttgcggtgtgtttaattaatttttggacggtggaaaacgttttatttgatagtagttatgatctaggac 311  Q
    ||||| |||||||| |||||| || |   ||||| || |||||||||  |||||| ||  || ||| || ||||||||||| ||| ||||||||||||||    
T  8083 acggtggcgtttcatcaaaggattggctagtttgtggagtgtttaatgcatttttagattgtagaacacattttatttgattgtatttatgatctaggac 8182  T
Q  312 ttgtttaagactataa 327  Q
    | ||||||| ||||||    
T  8183 tggtttaaggctataa 8198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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