View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2006_low_4 (Length: 391)
Name: NF2006_low_4
Description: NF2006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2006_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 12 - 374
Target Start/End: Original strand, 44298532 - 44298886
Alignment:
| Q |
12 |
aagaagaatatcattgtcgatttcatcttcgttccataatcagcctgtcacattaatggaataatttgctcatattgtaaattcttcaatgaaattaaat |
111 |
Q |
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| T |
44298532 |
aagaagaatatcattgtcgatttcatcttcgttccataatcagcctgtcacattaatggaataatttgctcatattgtaaattcttcaatgaaattaaat |
44298631 |
T |
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| Q |
112 |
ggaattaataatcattacctgaagtatgcaaccacccaaacccattccttcaaagagttgatggaagcaaagtgcagcaatgagaggccttatggtgcaa |
211 |
Q |
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| T |
44298632 |
ggaat----aatcattacctgaagtatgcaaccacccaaacccattccttcaaagagttgatggaagcaaagtgcagcaatgagaggccttatggtgcaa |
44298727 |
T |
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| Q |
212 |
tggttctctgaagcacccaatgacaaaccaatcactacagagtgcaccacaattcctaactccaaaaccttaatccaattccacacaacttacattaatt |
311 |
Q |
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| T |
44298728 |
tggttctctgaagcacccaatgacaaaccaatcactacagagtgcaccacaattcctaactccaaaaccttaatccaattccacacaacttacattaatt |
44298827 |
T |
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| Q |
312 |
aatataacaacaacatcatcttattaacaatacgaaagaaattgattaacctgagccacaaca |
374 |
Q |
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| T |
44298828 |
aatataacaatgataaaat----ttaacaatacgaaagaaattgattaacctgagccacaaca |
44298886 |
T |
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