View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20070_low_21 (Length: 342)
Name: NF20070_low_21
Description: NF20070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20070_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 204 - 325
Target Start/End: Original strand, 50339280 - 50339401
Alignment:
| Q |
204 |
ttattggcaaagttgtcatcctaatgataatattcggaaagataagaataatagtttagcaaaacaatctcgtaaggacaacttaaatgataaaaggttc |
303 |
Q |
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| T |
50339280 |
ttattggaaaagttgtcatcctaatgataatattcggaaagataagaataatagtttagcaaaacaatctcgtaaggacaacttaaatgataaaaggttc |
50339379 |
T |
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| Q |
304 |
taagatatattgaatttttcat |
325 |
Q |
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|||||||||||||||||||||| |
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| T |
50339380 |
taagatatattgaatttttcat |
50339401 |
T |
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