View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20070_low_34 (Length: 231)

Name: NF20070_low_34
Description: NF20070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20070_low_34
NF20070_low_34
[»] chr7 (25 HSPs)
chr7 (16-105)||(47742220-47742309)
chr7 (16-105)||(10706011-10706100)
chr7 (16-105)||(18109047-18109136)
chr7 (16-105)||(42503068-42503157)
chr7 (16-105)||(15069580-15069669)
chr7 (16-105)||(47064524-47064613)
chr7 (16-102)||(604533-604619)
chr7 (16-105)||(19045060-19045149)
chr7 (16-105)||(20709487-20709576)
chr7 (19-105)||(12111980-12112066)
chr7 (16-102)||(34623252-34623338)
chr7 (137-186)||(47064427-47064476)
chr7 (16-102)||(30790238-30790325)
chr7 (16-102)||(43620434-43620521)
chr7 (16-102)||(45767092-45767179)
chr7 (137-186)||(12112114-12112163)
chr7 (137-186)||(18108910-18108959)
chr7 (141-186)||(19045201-19045246)
chr7 (141-186)||(20709390-20709435)
chr7 (143-186)||(604711-604754)
chr7 (143-186)||(15069452-15069495)
chr7 (143-186)||(42502968-42503011)
chr7 (143-186)||(43620591-43620634)
chr7 (143-186)||(45766941-45766984)
chr7 (145-186)||(10706155-10706196)
[»] chr1 (47 HSPs)
chr1 (16-105)||(37018626-37018715)
chr1 (16-105)||(12643959-12644048)
chr1 (16-105)||(50114075-50114164)
chr1 (16-105)||(33168668-33168757)
chr1 (16-105)||(41456459-41456548)
chr1 (16-105)||(44469241-44469330)
chr1 (20-105)||(5081589-5081674)
chr1 (16-105)||(4517624-4517713)
chr1 (16-105)||(13633102-13633191)
chr1 (16-105)||(36073124-36073213)
chr1 (16-105)||(9711329-9711417)
chr1 (16-105)||(19495808-19495897)
chr1 (16-105)||(46978464-46978553)
chr1 (16-105)||(7966742-7966831)
chr1 (16-105)||(51665896-51665985)
chr1 (30-105)||(1180375-1180450)
chr1 (16-105)||(1655310-1655399)
chr1 (137-186)||(36073261-36073310)
chr1 (16-102)||(3944729-3944816)
chr1 (16-102)||(3993074-3993161)
chr1 (16-83)||(8459711-8459778)
chr1 (16-102)||(29352987-29353074)
chr1 (137-186)||(5081488-5081537)
chr1 (137-186)||(13177289-13177338)
chr1 (137-186)||(50114217-50114266)
chr1 (16-102)||(20353167-20353254)
chr1 (16-102)||(38772385-38772472)
chr1 (137-180)||(44469148-44469191)
chr1 (137-184)||(46978369-46978416)
chr1 (144-186)||(1655212-1655254)
chr1 (137-186)||(12644988-12645037)
chr1 (137-186)||(19495945-19495994)
chr1 (137-186)||(37018471-37018520)
chr1 (137-186)||(41456328-41456377)
chr1 (137-182)||(51665803-51665848)
chr1 (144-186)||(1180505-1180547)
chr1 (137-183)||(33168805-33168851)
chr1 (137-182)||(4517531-4517576)
chr1 (68-105)||(13177386-13177423)
chr1 (143-186)||(13632978-13633021)
chr1 (137-186)||(7966879-7966928)
chr1 (137-174)||(9711511-9711548)
chr1 (143-186)||(3944918-3944961)
chr1 (143-186)||(20353018-20353061)
chr1 (143-186)||(29353144-29353187)
chr1 (143-186)||(38772570-38772613)
chr1 (143-175)||(3992980-3993012)
[»] chr4 (21 HSPs)
chr4 (16-102)||(37394436-37394522)
chr4 (16-105)||(18579387-18579476)
chr4 (16-104)||(38461179-38461267)
chr4 (16-105)||(3407469-3407558)
chr4 (16-105)||(10374775-10374864)
chr4 (19-105)||(4773835-4773921)
chr4 (16-105)||(11506324-11506413)
chr4 (30-102)||(6187450-6187522)
chr4 (16-105)||(44050323-44050412)
chr4 (137-186)||(4773738-4773787)
chr4 (16-102)||(19069954-19070041)
chr4 (140-186)||(44050226-44050272)
chr4 (137-186)||(10374914-10374963)
chr4 (137-186)||(38461316-38461365)
chr4 (16-102)||(49564596-49564683)
chr4 (137-183)||(3407351-3407397)
chr4 (137-186)||(51642456-51642506)
chr4 (141-186)||(24416069-24416114)
chr4 (137-186)||(11506228-11506276)
chr4 (143-186)||(19070113-19070156)
chr4 (143-186)||(49564785-49564828)
[»] scaffold0169 (2 HSPs)
scaffold0169 (16-105)||(10494-10583)
scaffold0169 (137-185)||(10400-10448)
[»] chr6 (21 HSPs)
chr6 (16-105)||(23959648-23959737)
chr6 (16-105)||(31150295-31150384)
chr6 (16-101)||(28361951-28362036)
chr6 (16-105)||(29286956-29287045)
chr6 (16-80)||(25140360-25140424)
chr6 (16-105)||(2259838-2259927)
chr6 (16-105)||(18609566-18609655)
chr6 (137-186)||(25140276-25140325)
chr6 (137-186)||(29287090-29287139)
chr6 (16-105)||(29667053-29667142)
chr6 (16-102)||(1609048-1609135)
chr6 (137-184)||(31149881-31149928)
chr6 (137-186)||(23959785-23959834)
chr6 (137-186)||(28361836-28361885)
chr6 (144-186)||(18609466-18609508)
chr6 (137-186)||(29666956-29667005)
chr6 (42-104)||(19133454-19133516)
chr6 (137-186)||(2259974-2260023)
chr6 (45-105)||(34231280-34231339)
chr6 (137-186)||(19133524-19133573)
chr6 (137-186)||(34231385-34231434)
[»] chr5 (29 HSPs)
chr5 (16-105)||(27864157-27864246)
chr5 (16-105)||(1039022-1039111)
chr5 (16-105)||(25891990-25892079)
chr5 (16-105)||(13564394-13564483)
chr5 (16-105)||(11029761-11029850)
chr5 (16-105)||(38856469-38856558)
chr5 (16-102)||(7018252-7018338)
chr5 (16-105)||(4197274-4197363)
chr5 (16-105)||(7797331-7797420)
chr5 (16-105)||(28882742-28882831)
chr5 (16-105)||(33994379-33994468)
chr5 (16-105)||(37815336-37815425)
chr5 (16-104)||(24050792-24050881)
chr5 (137-186)||(7797468-7797517)
chr5 (16-102)||(14280210-14280297)
chr5 (137-184)||(27864296-27864343)
chr5 (16-105)||(24053916-24054006)
chr5 (137-186)||(1038917-1038966)
chr5 (137-186)||(24054054-24054103)
chr5 (137-186)||(28882889-28882938)
chr5 (137-180)||(25892129-25892172)
chr5 (139-183)||(4197413-4197457)
chr5 (137-186)||(7018411-7018460)
chr5 (137-186)||(13564559-13564607)
chr5 (140-181)||(43179004-43179045)
chr5 (143-186)||(11029909-11029952)
chr5 (143-186)||(38856647-38856690)
chr5 (144-186)||(37815507-37815549)
chr5 (137-186)||(30353319-30353368)
[»] chr8 (28 HSPs)
chr8 (16-105)||(23924712-23924801)
chr8 (16-105)||(31959277-31959366)
chr8 (16-105)||(2124948-2125037)
chr8 (28-105)||(7171544-7171621)
chr8 (16-102)||(35963054-35963142)
chr8 (16-105)||(43376509-43376598)
chr8 (16-105)||(22660803-22660892)
chr8 (16-98)||(43680155-43680236)
chr8 (137-186)||(31959184-31959233)
chr8 (16-72)||(40211-40267)
chr8 (16-105)||(22587676-22587761)
chr8 (16-102)||(7343788-7343875)
chr8 (16-102)||(32376406-32376493)
chr8 (137-186)||(2125085-2125134)
chr8 (137-186)||(22587579-22587628)
chr8 (137-186)||(23924858-23924907)
chr8 (137-186)||(35963197-35963246)
chr8 (137-186)||(43376412-43376461)
chr8 (141-186)||(43680295-43680340)
chr8 (16-102)||(8420159-8420246)
chr8 (16-102)||(30301889-30301976)
chr8 (137-186)||(22660708-22660757)
chr8 (137-186)||(40352-40401)
chr8 (140-186)||(7171439-7171485)
chr8 (143-186)||(7343641-7343684)
chr8 (143-186)||(8420312-8420355)
chr8 (143-186)||(30302066-30302109)
chr8 (143-186)||(32376583-32376626)
[»] chr3 (33 HSPs)
chr3 (16-105)||(2744209-2744298)
chr3 (16-105)||(46990280-46990369)
chr3 (16-105)||(67637-67726)
chr3 (16-105)||(36813609-36813698)
chr3 (16-105)||(48247165-48247254)
chr3 (16-105)||(9427359-9427448)
chr3 (16-105)||(16448284-16448373)
chr3 (16-83)||(4001744-4001811)
chr3 (16-105)||(6502026-6502115)
chr3 (16-83)||(50956931-50956998)
chr3 (19-101)||(21952560-21952642)
chr3 (16-102)||(6744558-6744645)
chr3 (137-186)||(67776-67825)
chr3 (137-186)||(48247324-48247373)
chr3 (16-102)||(3952446-3952533)
chr3 (16-102)||(8157263-8157350)
chr3 (16-102)||(13744020-13744107)
chr3 (16-102)||(14402237-14402324)
chr3 (16-102)||(30943945-30944032)
chr3 (137-186)||(46990419-46990468)
chr3 (140-186)||(2744361-2744407)
chr3 (137-186)||(6502163-6502212)
chr3 (142-186)||(36813973-36814017)
chr3 (145-186)||(21952702-21952743)
chr3 (143-186)||(9427508-9427551)
chr3 (143-186)||(16448181-16448224)
chr3 (42-102)||(35443901-35443961)
chr3 (143-186)||(3952305-3952348)
chr3 (143-186)||(6744449-6744492)
chr3 (143-186)||(8157438-8157481)
chr3 (143-186)||(13744177-13744220)
chr3 (143-186)||(14402124-14402167)
chr3 (143-186)||(30944099-30944142)
[»] chr2 (42 HSPs)
chr2 (16-105)||(3796104-3796193)
chr2 (16-105)||(24753255-24753344)
chr2 (16-105)||(7266674-7266763)
chr2 (16-105)||(81480-81569)
chr2 (16-105)||(24602405-24602494)
chr2 (16-105)||(24611620-24611709)
chr2 (16-105)||(39797670-39797759)
chr2 (16-105)||(41182164-41182253)
chr2 (16-105)||(43944455-43944544)
chr2 (16-105)||(438981-439070)
chr2 (16-105)||(1097337-1097426)
chr2 (16-105)||(45479042-45479131)
chr2 (16-102)||(38949419-38949505)
chr2 (16-105)||(9659269-9659358)
chr2 (16-105)||(28343276-28343365)
chr2 (20-105)||(41005294-41005379)
chr2 (137-186)||(438860-438909)
chr2 (137-186)||(24753166-24753215)
chr2 (137-186)||(41005427-41005476)
chr2 (137-186)||(43944592-43944641)
chr2 (16-102)||(5350963-5351050)
chr2 (16-102)||(10620728-10620815)
chr2 (16-102)||(41563722-41563809)
chr2 (140-186)||(1097477-1097523)
chr2 (137-186)||(81383-81432)
chr2 (137-186)||(3796251-3796300)
chr2 (16-102)||(209740-209827)
chr2 (144-186)||(28343453-28343495)
chr2 (137-186)||(9659128-9659177)
chr2 (137-184)||(45478911-45478958)
chr2 (144-186)||(41182309-41182351)
chr2 (16-61)||(12906283-12906328)
chr2 (137-182)||(24602542-24602587)
chr2 (137-182)||(24611527-24611572)
chr2 (143-186)||(39797532-39797575)
chr2 (143-186)||(209897-209940)
chr2 (143-186)||(5350828-5350871)
chr2 (143-186)||(10620911-10620954)
chr2 (143-186)||(38949328-38949371)
chr2 (143-186)||(41563575-41563618)
chr2 (42-105)||(43668894-43668957)
chr2 (143-180)||(7266548-7266585)
[»] scaffold0116 (2 HSPs)
scaffold0116 (16-105)||(15185-15274)
scaffold0116 (141-186)||(15054-15099)
[»] scaffold0201 (2 HSPs)
scaffold0201 (16-102)||(23168-23254)
scaffold0201 (148-186)||(23283-23321)
[»] scaffold0219 (1 HSPs)
scaffold0219 (16-105)||(19164-19253)
[»] scaffold0057 (2 HSPs)
scaffold0057 (16-105)||(22392-22481)
scaffold0057 (137-186)||(22529-22578)
[»] scaffold0794 (2 HSPs)
scaffold0794 (16-105)||(981-1070)
scaffold0794 (137-186)||(885-933)
[»] scaffold0494 (2 HSPs)
scaffold0494 (16-102)||(4558-4645)
scaffold0494 (143-186)||(4443-4486)
[»] scaffold0341 (1 HSPs)
scaffold0341 (137-186)||(13826-13875)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 47742309 - 47742220
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47742309 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 47742220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 10706011 - 10706100
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  10706011 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 10706100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 18109136 - 18109047
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  18109136 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 18109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 42503157 - 42503068
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  42503157 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 42503068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 15069669 - 15069580
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  15069669 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattatgttcaccacataaaagtc 15069580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 47064613 - 47064524
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||||||||    
T  47064613 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataattattgcactagtttcaccacataaaagtc 47064524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 604533 - 604619
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||| || |||||||||||||||    
T  604533 attaaatggaatgtaataacgaataaatgaaatgcggaaacattaaaaagctataaataagtattgcattattttcaccacataaaa 604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 19045060 - 19045149
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||   |||||| |||||||||||||||||||||||||||||||    
T  19045060 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacactaataacgaataaatcagtattgcactagtttcaccacataaaagtc 19045149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 20709576 - 20709487
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||   |||||| |||||||||||||||||||||||||||||||    
T  20709576 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacactaataacgaataaatcagtattgcactagtttcaccacataaaagtc 20709487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 12111980 - 12112066
Alignment:
Q  19 aaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  12111980 aaatgaaatgtaataacaaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttaaccacataaaagtc 12112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 34623252 - 34623338
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||| |||||||||||||||||||||| || ||| ||||||||||   ||||||||||||||||||||||||| |||||||||    
T  34623252 attaaatgaaatgtaataacgaataaatcaagtgagtaaacattaataatgaataaataagtattgcactagtttcatcacataaaa 34623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 47064476 - 47064427
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47064476 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 47064427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 30790325 - 30790238
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  30790325 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 30790238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 43620434 - 43620521
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  43620434 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 43620521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 45767179 - 45767092
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  45767179 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 45767092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 12112114 - 12112163
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12112114 tggccaaaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 12112163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 18108959 - 18108910
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  18108959 tggccacaaaaaattgacgttacaatttcgaccccaaaaaatacgtcggt 18108910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 19045201 - 19045246
Alignment:
Q  141 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19045201 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 19045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 20709435 - 20709390
Alignment:
Q  141 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  20709435 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 20709390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 604711 - 604754
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  604711 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 15069495 - 15069452
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  15069495 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 15069452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 42503011 - 42502968
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  42503011 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 42502968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 43620591 - 43620634
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  43620591 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 43620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 45766984 - 45766941
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  45766984 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 45766941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 10706155 - 10706196
Alignment:
Q  145 aaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||| | |||||||||||||||||||||||||| ||||||    
T  10706155 aaaaatcgacgttacaatttcgaccccaaaatatatgtcggt 10706196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 37018715 - 37018626
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37018715 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 37018626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 12643959 - 12644048
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12643959 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 12644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 50114075 - 50114164
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50114075 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 50114164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 33168668 - 33168757
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33168668 attaaatgaaatgtaataacgaataaatcaaatgcgtaagcattaataagctataaataagtattgcactagtttcaccacataaaagtc 33168757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 41456548 - 41456459
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  41456548 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 41456459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 44469330 - 44469241
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44469330 attaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 44469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 5081674 - 5081589
Alignment:
Q  20 aatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5081674 aatgtaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagttttaccacataaaagtc 5081589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 4517713 - 4517624
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  4517713 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 4517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 13633191 - 13633102
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  13633191 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 13633102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 36073124 - 36073213
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  36073124 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 36073213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 9711329 - 9711417
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9711329 attaaattgaatgtaataacaaataaatcaaatgcgtaaacat-aataagctataaataagtattgcactaatttcaccacataaaagtc 9711417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 19495808 - 19495897
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  19495808 attaaatgaaatgtaataacgaataaatcaaatgcgtaaatattaataacgaataaataagtattgcactagtttcaccacataaaagtc 19495897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 46978553 - 46978464
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  46978553 attaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 46978464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 7966742 - 7966831
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| | ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  7966742 attaaatgaaatgtaataacgaataaatcaagtgcgtaaatattaataacaaataaataagtattgcactagtttcaccacataaaagtc 7966831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 51665985 - 51665896
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||| |   |||||||||||| |||||||||||||||||||||||||    
T  51665985 attaaatgaaatgtaataacgaataaatcaattgcgtagacattaatgacgaataaataagtatggcactagtttcaccacataaaagtc 51665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 1180375 - 1180450
Alignment:
Q  30 aataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||| ||| ||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  1180375 aataacgaataaatcaaatgagtaaacattaataacgaataaataagtattgcaatagtttcaccacataaaagtc 1180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 1655399 - 1655310
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||| ||||||||||| |||||| ||||||||||   |||||||| |||||||||||||| | ||||||||||||    
T  1655399 attaaatgaaatgtaataatgaataaatcaagtgcgtaaacattaataacgaataaataaatattgcactagttttatcacataaaagtc 1655310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 36073261 - 36073310
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073261 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 36073310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 3944729 - 3944816
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3944729 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3944816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3993161 - 3993074
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3993161 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3993074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 8459711 - 8459778
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 83  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||    
T  8459711 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgca 8459778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 29352987 - 29353074
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  29352987 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 29353074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 5081537 - 5081488
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5081537 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 5081488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 13177338 - 13177289
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13177338 tggccacaaaaaattggcgttacaatttggaccccaaaatatacgtcggt 13177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 50114217 - 50114266
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50114217 tggccacaaaaaattggcgttacaatttcgaccccaaaatatatgtcggt 50114266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20353254 - 20353167
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtaca-cattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||| ||||||||| ||||||| | | |||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  20353254 attaaatggaatgtaatatcgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 20353167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 38772385 - 38772472
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| || |||||||| ||||||||| || |||| ||||||||||    
T  38772385 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaaactataaattagtattgcattattttctccacataaaa 38772472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 44469191 - 44469148
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44469191 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 44469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 46978416 - 46978369
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 184  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46978416 tggccacaaaaaatttgcgttacaatttcgaccccaaaatatacgtcg 46978369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 1655254 - 1655212
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1655254 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 1655212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 12644988 - 12645037
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12644988 tggccacaaaaaattgacgttataatttcgaccccaaaatatacgtcggt 12645037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 19495945 - 19495994
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19495945 tggccacaaaaaattggcgttacaatttcgacgccaaaatacacgtcggt 19495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 37018520 - 37018471
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  37018520 tggccacaaaaaattggcattacaatttcgaccccaaaatatatgtcggt 37018471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 41456377 - 41456328
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  41456377 tggccacaaaaaattggcgttacaatttagaccccaaaaaatacgtcggt 41456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 51665848 - 51665803
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  51665848 tggccacgaaaaattggcgttacaatttcgaccccaaaatatacgt 51665803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 1180505 - 1180547
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  1180505 aaaaaattggcgttacaatttcgaccccaaaatatatgtcggt 1180547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 33168805 - 33168851
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 183  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  33168805 tggccacaaaaaattggcgttacaatttcgaccttaaaatatacgtc 33168851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 4517576 - 4517531
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 182  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  4517576 tggccacaaaaaatcggcgttacaatttcgaccccaaattatacgt 4517531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 13177423 - 13177386
Alignment:
Q  68 ataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13177423 ataaataagtattgcactagtttcaccacataaaagtc 13177386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 13633021 - 13632978
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  13633021 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 13632978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 7966879 - 7966928
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||  ||||||| |||||||||||||||||||||||||| ||||||    
T  7966879 tggccactgaaaattgacgttacaatttcgaccccaaaatatatgtcggt 7966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 9711511 - 9711548
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaa 174  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9711511 tggccacaaaaaattggcgttacaatttcgaccacaaa 9711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 3944918 - 3944961
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  3944918 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 3944961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 20353061 - 20353018
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  20353061 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 20353018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 29353144 - 29353187
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  29353144 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 29353187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 38772570 - 38772613
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  38772570 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 38772613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 3993012 - 3992980
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaa 175  Q
    |||||||||||||||||||||||||||| ||||    
T  3993012 caaaaaattggcgttacaatttcgacccaaaaa 3992980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37394522 - 37394436
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37394522 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaa 37394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 18579387 - 18579476
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  18579387 attaaatgaaatgtaataacgaataaatcaaatgagtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 18579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 38461179 - 38461267
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  38461179 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcattagtttcaccacataaaagt 38461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 3407558 - 3407469
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||| || |||||||| |||||||||    
T  3407558 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaaactataaataagtattgcattattttcaccaaataaaagtc 3407469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 10374775 - 10374864
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||| ||||    
T  10374775 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataactattgcactagtttcaccacataacagtc 10374864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 4773921 - 4773835
Alignment:
Q  19 aaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  4773921 aaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcattagtttcaccacataaaagtc 4773835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 11506413 - 11506324
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||| ||| |||||||||||||||||||||    
T  11506413 attatatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtatcgcattagtttcaccacataaaagtc 11506324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 6187450 - 6187522
Alignment:
Q  30 aataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||    
T  6187450 aataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcactagtttcaccacataaaa 6187522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 44050412 - 44050323
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| | ||||||||   ||||||||||||||||||||||||| || |||||||||    
T  44050412 attaaatgaaatgtaataacgaataaatcaagtgcgtaaatattaataacaaataaataagtattgcactagtttcatcaaataaaagtc 44050323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 4773787 - 4773738
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4773787 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 4773738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 19069954 - 19070041
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  19069954 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 19070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 44050272 - 44050226
Alignment:
Q  140 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44050272 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 44050226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 10374914 - 10374963
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10374914 tggccacaaaaaattggcgttacaatttcgaccctaaaatatacgtcggt 10374963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 38461316 - 38461365
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38461316 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacttcggt 38461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 49564596 - 49564683
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||| ||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  49564596 attaaatggaatttaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 49564683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 3407397 - 3407351
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3407397 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtc 3407351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 51642456 - 51642506
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgacccc-aaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51642456 tggccacaaaaaattggcgttacaatttcgaccccaaaaatatacgtcggt 51642506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 24416069 - 24416114
Alignment:
Q  141 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  24416069 cacaaaaaattagcgttacaatttcgaccccaaaatatatgtcggt 24416114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 11506276 - 11506228
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  11506276 tggccacaaaaaattggtgtcacaatttcga-cccaaaatatacgtcggt 11506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 19070113 - 19070156
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  19070113 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 19070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 49564785 - 49564828
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  49564785 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 49564828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 10583 - 10494
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10583 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 10494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 10448 - 10400
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcgg 185  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  10448 tggccacaaaaaattggcgttacaatttcaaccccaaaatatatgtcgg 10400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 23959648 - 23959737
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23959648 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 23959737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 31150384 - 31150295
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31150384 attaaatggaatgtaataacgaataattcaaatgtgtaaacattaataagctataaacaagtattgcactagtttcaccacataaaagtc 31150295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 28362036 - 28361951
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaa 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  28362036 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcattattttcaccacataaa 28361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 29286956 - 29287045
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||| || |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  29286956 attaaatgaaatgtaataacgaataaataaagtgcgtaaacattaataatgaataaataagtattgcactagtttcaccacataaaagtc 29287045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 25140424 - 25140360
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25140424 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtatt 25140360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 2259838 - 2259927
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||   |||||||||||||||| ||||||||||| |||||||||    
T  2259838 attaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcattagtttcaccatataaaagtc 2259927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 18609655 - 18609566
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||   |||||||| ||||||||| |||| |||| |||||||||    
T  18609655 attaaatgaaatgtaataacgaataaatcaaatccgtaaacattaataatgaataaataaatattgcacttgttttaccatataaaagtc 18609566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 25140325 - 25140276
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25140325 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 25140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 29287090 - 29287139
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29287090 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 29287139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 29667142 - 29667053
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| || ||| ||||||||||   |||||||| |||||||| |||||||||| |||||||||    
T  29667142 attaaatgaaatgtaataacgaataaatcaagtgtgtaaacattaataacgaataaataaatattgcacgagtttcaccatataaaagtc 29667053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 1609048 - 1609135
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  1609048 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 1609135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 31149928 - 31149881
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 184  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31149928 tggccataaaaaattggcgttacaatttcgaccccaaaatatacgtcg 31149881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 23959785 - 23959834
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23959785 tggccacaaaaaattggagttacaatttcgaccccaaaatacacgtcggt 23959834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 28361885 - 28361836
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  28361885 tggccacaaaaaattggcgttacaatttcgatcccaaaaaatacgtcggt 28361836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 18609508 - 18609466
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18609508 aaaaaattggcgttacaatttcgatcccaaaatatacgtcggt 18609466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 29667005 - 29666956
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  29667005 tggccacaaaaaattggtgttacaatttcgatcctaaaatatacgtcggt 29666956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 19133454 - 19133516
Alignment:
Q  42 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 104  Q
    |||||||| ||| ||||||||||   ||||| |||||||||||||||| ||||||||||||||    
T  19133454 atcaaatgtgtaaacattaataacgaataaaaaagtattgcactagttccaccacataaaagt 19133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 2259974 - 2260023
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||||    
T  2259974 tggcaacaaaaaattgccgttacaatttcgctcccaaaatatacgtcggt 2260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 34231280 - 34231339
Alignment:
Q  45 aaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||| || |||||||||||  |||||||||||| ||||||||||||||||| |||||||    
T  34231280 aaatgcataaacattaataaggaataaataagtat-gcactagtttcaccacaaaaaagtc 34231339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 19133524 - 19133573
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||| |||| |||||||||||| |||||||||||| ||| ||||||    
T  19133524 tggccacacaaaaatggcgttacaatatcgaccccaaaaaatatgtcggt 19133573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 34231385 - 34231434
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||| ||||||||| ||||||||||| || |||||||||| |||||||    
T  34231385 tggccataaaaaattgacgttacaattttgatcccaaaatattcgtcggt 34231434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 27864157 - 27864246
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27864157 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 27864246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 1039111 - 1039022
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1039111 attaaatggaatgtaataacgaataaatcaaatgcataaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 1039022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 25891990 - 25892079
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25891990 attaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 25892079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 13564394 - 13564483
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  13564394 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcattattttcaccacataaaagtc 13564483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 11029761 - 11029850
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  11029761 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 11029850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 38856469 - 38856558
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  38856469 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 38856558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7018252 - 7018338
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| || |||||||||||||||    
T  7018252 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagatataaaaaagtattgcattattttcaccacataaaa 7018338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 4197274 - 4197363
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  4197274 attaaaagaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 4197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 7797331 - 7797420
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  7797331 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 7797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 28882742 - 28882831
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  28882742 attaaatggaatgtaataacgaataaatgaaatacgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 28882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 33994468 - 33994379
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  33994468 attaaatgaaatgtaataacgaataaatcaaatgcataaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 33994379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 37815336 - 37815425
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||| || |||||| |||||||||||    
T  37815336 attaaatggaatgtaataacgaataaatgaaatgcgcaaacattaaaaagctataaataagtattgcattattttcactacataaaagtc 37815425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 24050792 - 24050881
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaa-tgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagt 104  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  24050792 attaaatgaaatgtaataacgaataaatcaaaatgcgtaaacattaataacgaataaataagtattgcagtagtttcaccacataaaagt 24050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 7797468 - 7797517
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7797468 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 7797517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 14280297 - 14280210
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  14280297 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 14280210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 27864296 - 27864343
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27864296 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 27864343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 24053916 - 24054006
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaa-tgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||| |||||||||||| |||| | ||||||||||   |||||||||||||||| ||||||||||| |||||||||    
T  24053916 attaaatgaaatgtaataaagaataaatcaaaatgcgcaaacattaataacgaataaataagtattgcagtagtttcaccaaataaaagtc 24054006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 1038966 - 1038917
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1038966 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacatcggt 1038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 24054054 - 24054103
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24054054 tggccacaaaaaattggcgttacaatttcgactccaaaatatacgtcggt 24054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 28882889 - 28882938
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28882889 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 28882938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 25892129 - 25892172
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25892129 tggccacaaaaaattggcgttacaatttcgaccccaaaatatac 25892172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 4197413 - 4197457
Alignment:
Q  139 gccacaaaaaattggcgttacaatttcgaccccaaaatatacgtc 183  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  4197413 gccacaaaaaattggggttacaatttcgaccccaaaatatacgtc 4197457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 7018411 - 7018460
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  7018411 tggccacaaaaaattggcgttacaatttagaccccaaaaaatatgtcggt 7018460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 13564559 - 13564607
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  13564559 tggccacaaaaaattggcgttacaatttcga-cccaaaaaatacgtcggt 13564607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 43179045 - 43179004
Alignment:
Q  140 ccacaaaaaattggcgttacaatttcgaccccaaaatatacg 181  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  43179045 ccacaaaaaattggtgttacaatttcgaccccaaaatatacg 43179004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 11029909 - 11029952
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  11029909 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 11029952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 38856647 - 38856690
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  38856647 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 38856690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 37815507 - 37815549
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  37815507 aaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 37815549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 30353319 - 30353368
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  30353319 tggccacaacaaattggtgttacaatttcgacccaaaaatacgcgtcggt 30353368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 23924712 - 23924801
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  23924712 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagttataaataagtattgcattagtttcaccacataaaagtc 23924801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 31959366 - 31959277
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31959366 attaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattagtttcaccacataaaagtc 31959277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 2124948 - 2125037
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  2124948 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacaaataaataagtattgcactagtttcaccacataaaagtc 2125037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 7171621 - 7171544
Alignment:
Q  28 gtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7171621 gtaataacgaataaatcaaatgcgttaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 7171544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 35963054 - 35963142
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagc--tataaataagtattgcactagtttcaccacataaaa 102  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35963054 attaaatggaatgtaataaggaataaatcaaatgcgtaaacattaataagctatataaataagtattgcactagtttcaccacataaaa 35963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 43376598 - 43376509
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   |||||||| ||||||| |||||||||||||||||||||    
T  43376598 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataaatattgcattagtttcaccacataaaagtc 43376509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 22660892 - 22660803
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||  ||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  22660892 attaaatgaaacataataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttaaccacataaaagtc 22660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 43680155 - 43680236
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacat 98  Q
    |||||||| ||| ||||||||||||||||||||| ||| ||||||||||   |||||||||||||||||||||||||||||||    
T  43680155 attaaatgaaat-taataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacat 43680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 31959233 - 31959184
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31959233 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 40211 - 40267
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaa 72  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  40211 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaataagctataaa 40267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 22587761 - 22587676
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| || |||||||||||||||||||||||||| | ||||||||      |||||||||||||||||||||||||||||||||||    
T  22587761 attaaatgaaaagtaataacgaataaatcaaatgcgtaaaaattaataacg----aataagtattgcactagtttcaccacataaaagtc 22587676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 7343875 - 7343788
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  7343875 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 7343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 32376406 - 32376493
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  32376406 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 32376493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 2125085 - 2125134
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2125085 tggccacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 2125134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 22587628 - 22587579
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22587628 tggccacaaaaaattggcgttacaatttcgatcccaaaatatacgtcggt 22587579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 23924858 - 23924907
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23924858 tggccacaaaaaattagcgttacaatttcgaccccaaaatatacgtcggt 23924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 35963197 - 35963246
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35963197 tggccacaaaaaattggcgttacaatttcgaccccaaagtatacgtcggt 35963246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 43376461 - 43376412
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43376461 tggccacagaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43376412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 43680295 - 43680340
Alignment:
Q  141 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43680295 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43680340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 8420159 - 8420246
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| |||||| || || |||| ||||||||||    
T  8420159 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattccattattttctccacataaaa 8420246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30301889 - 30301976
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| || |||||||| ||||||||| || |||| ||||||||||    
T  30301889 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaaactataaattagtattgcattattttctccacataaaa 30301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 22660757 - 22660708
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22660757 tggccacaaaaaattagcgttacaatttcgactccaaaatatacgtcggt 22660708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 40352 - 40401
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  40352 tggccacaaaaaattggcgttataattttgaccctaaaatatacgtcggt 40401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 7171485 - 7171439
Alignment:
Q  140 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  7171485 ccacaaaaaattggcattacaattttgaccccaaaatacacgtcggt 7171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 7343684 - 7343641
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  7343684 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 7343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 8420312 - 8420355
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  8420312 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 8420355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 30302066 - 30302109
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  30302066 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 30302109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 32376583 - 32376626
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  32376583 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 32376626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 2744209 - 2744298
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  2744209 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 2744298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 46990280 - 46990369
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46990280 attaaatggaatgtaataacaaataaatcaaatacgtaaacattaataagctataaataagtattgcactagtttcaccacataaaagtc 46990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 67637 - 67726
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  67637 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataattattgcactattttcaccacatgaaagtc 67726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 36813609 - 36813698
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36813609 attaaatggaatgtaataatgaataaatcaaatgcgtaaacattaataagttataaataagtattgcattagtttcaccacataaaagtc 36813698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 48247165 - 48247254
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  48247165 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcactgacttcaccacataaaagtc 48247254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 9427359 - 9427448
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  9427359 attaaatagaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 9427448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 16448373 - 16448284
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  16448373 attaaatagaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 16448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 4001811 - 4001744
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 83  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4001811 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgca 4001744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 6502026 - 6502115
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||| ||||||||    
T  6502026 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacaaataaataagtattgcactagtttcaccacttaaaagtc 6502115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 50956998 - 50956931
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgca 83  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  50956998 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagttataaataagtattgca 50956931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 21952560 - 21952642
Alignment:
Q  19 aaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaa 101  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  21952560 aaatgaaatgtaataacgaataaatcatatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaa 21952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 6744645 - 6744558
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtaca-cattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||| ||||||||||||||||||||| || |||| ||||||||||    
T  6744645 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaataagtattgcattattttctccacataaaa 6744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 67776 - 67825
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67776 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 67825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 48247324 - 48247373
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48247324 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 48247373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3952533 - 3952446
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  3952533 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 3952446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 8157263 - 8157350
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  8157263 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 8157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 13744020 - 13744107
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  13744020 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 13744107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 14402324 - 14402237
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacac-attaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| ||||||| | || ||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  14402324 attaaatggaatgtaataacgaataaatgaaatgcggaaacaattaaaaagctataaattagtattgcattattttctccacataaaa 14402237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30943945 - 30944032
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  30943945 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 30944032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 46990419 - 46990468
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46990419 tggccacaaaaaattggcgttataatttcgaccccaaaatatacgtcggt 46990468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 2744361 - 2744407
Alignment:
Q  140 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  2744361 ccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 2744407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 6502163 - 6502212
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6502163 tggccacaaaaaattggcgctataatttcgaccccaaaatatacgtcggt 6502212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 36813973 - 36814017
Alignment:
Q  142 acaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  36813973 acaaaaaattgacgttacaatttcgaccccaaaatatacgtcggt 36814017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 21952702 - 21952743
Alignment:
Q  145 aaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  21952702 aaaaatttgcgttacaatttcgaccccaaaatatacgtcggt 21952743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 9427508 - 9427551
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  9427508 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 9427551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 16448224 - 16448181
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  16448224 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 16448181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 35443901 - 35443961
Alignment:
Q  42 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||| ||||||||||   ||||| ||||||||||||||||  |||||||||||    
T  35443901 atcaaatgcgtaaacattaataacgaataaaaaagtattgcactagttcaaccacataaaa 35443961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 3952348 - 3952305
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  3952348 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 3952305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 6744492 - 6744449
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  6744492 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 6744449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 8157438 - 8157481
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  8157438 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 8157481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 13744177 - 13744220
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  13744177 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 13744220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 14402167 - 14402124
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  14402167 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 14402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 30944099 - 30944142
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  30944099 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 30944142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 3796104 - 3796193
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  3796104 attaaatggaatgtaataacgaataaatcaaatgcgtaaacattaataagctataaataagtattgcattattttcaccacataaaagtc 3796193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 24753344 - 24753255
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24753344 attaaatggaatgtaataatgaataaatcaaatgcgtaaatattaataagctataaataagtattgcattagtttcaccacataaaagtc 24753255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 7266763 - 7266674
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  7266763 attaaatggaatgtaataacgaataaatgaaatgcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 7266674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 81569 - 81480
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  81569 attaaatcaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 81480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 24602405 - 24602494
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  24602405 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 24602494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 24611709 - 24611620
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  24611709 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 39797759 - 39797670
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  39797759 attaaatggaatgtaataacgaataaatgaaattcgtaaacattaaaaagctataaataagtattgcattattttcaccacataaaagtc 39797670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 41182164 - 41182253
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||| |||||||||||||||    
T  41182164 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagttgcaccacataaaagtc 41182253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 43944455 - 43944544
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  43944455 attaaatgaaatgtaataatgaataaatcaaatgcgtaaacattaataatgaataaataagtattgcactagtttcaccacataaaagtc 43944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 439070 - 438981
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||| | ||||||||||||||||||||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  439070 attaaaagaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 438981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 1097337 - 1097426
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||   |||||||||||||||||||||||| |||||||||||||    
T  1097337 attaaatgaaatgtaataacgaataaatcaaatgtgtaaacattaataacgaataaataagtattgcactagtttcgccacataaaagtc 1097426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 45479131 - 45479042
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| ||||||||||  ||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  45479131 attaaatgaaatgtaataaaaaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 45479042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 38949505 - 38949419
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    ||||||||||||||||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  38949505 attaaatggaatgtaataacggataaatgaaatgcggaaacattaaaaagctataaataaatattgcattattttcaccacataaaa 38949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 9659358 - 9659269
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    ||||||||  |||||||||||||||||| || |||||| ||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  9659358 attaaatgagatgtaataacgaataaattaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccatataaaagtc 9659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 28343276 - 28343365
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||| | ||||||||||| |||||| ||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  28343276 attaaatgaaatgtaatgatgaataaatcaagtgcgtaaacattaataacgaataaataagtattggactagtttcaccacataaaagtc 28343365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 41005294 - 41005379
Alignment:
Q  20 aatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||| |||||| || ||||||||||||||||||| ||||||||||   |||||||| |||||||||||||||||||||||||||||    
T  41005294 aatgaaatgtattagcgaataaatcaaatgcgtaaacattaataacgaataaataactattgcactagtttcaccacataaaagtc 41005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 438909 - 438860
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  438909 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 438860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 24753215 - 24753166
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24753215 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 24753166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 41005427 - 41005476
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41005427 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 41005476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 43944592 - 43944641
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43944592 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 43944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 5351050 - 5350963
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  5351050 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 5350963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 10620728 - 10620815
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  10620728 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 10620815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 41563809 - 41563722
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  41563809 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 41563722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 1097477 - 1097523
Alignment:
Q  140 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1097477 ccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 1097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 81432 - 81383
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  81432 tggccacaaaaaattagcgttacaatttcgaccccaaaatatacgtcggt 81383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 3796251 - 3796300
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3796251 tggccacaaaaaattggcgttacaatttcgaccccaaaaaatacgtcggt 3796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 209740 - 209827
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | | ||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  209740 attaaatggaatgtaataacgaataaatgaaatgcggaaaatattaaaaagctataaattagtattgcattattttctccacataaaa 209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 28343453 - 28343495
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28343453 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 28343495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 9659177 - 9659128
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9659177 tggccacaaaaaattgacgttacaatttcaaccccaaaatatacgtcggt 9659128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 45478958 - 45478911
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcg 184  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  45478958 tggccaaaaaaaattggcattacaatttcgaccccaaaatatacgtcg 45478911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 41182309 - 41182351
Alignment:
Q  144 aaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  41182309 aaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 41182351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 12906283 - 12906328
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaa 61  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  12906283 attaaatgaaatgtaataacgaataaatcaaatgcgtaaacattaa 12906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 24602542 - 24602587
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 182  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24602542 tggccacaaaaaattggcattacaattttgaccccaaaatatacgt 24602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 24611572 - 24611527
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgt 182  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24611572 tggccacaaaaaattggcattacaattttgaccccaaaatatacgt 24611527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 39797575 - 39797532
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  39797575 caaaaaattggcgttacaatttcgaccccaaaaaatacatcggt 39797532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 209897 - 209940
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  209897 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 209940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 5350871 - 5350828
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  5350871 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 5350828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 10620911 - 10620954
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  10620911 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 10620954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 38949371 - 38949328
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||| |||||||||||||||||||||||||| |||| |||||    
T  38949371 caaaaagttggcgttacaatttcgaccccaaaaaatacatcggt 38949328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 41563618 - 41563575
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  41563618 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 41563575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 43668894 - 43668957
Alignment:
Q  42 atcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||| ||||||||||   ||||| ||||||||  |||||| |||||||||||||||    
T  43668894 atcaaatgcgtaaacattaataatgaataaaaaagtattgtgctagttccaccacataaaagtc 43668957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 7266585 - 7266548
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatac 180  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  7266585 caaaaaattggcattacaatttcgaccccaaaaaatac 7266548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 15274 - 15185
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  15274 attaaatggaatgtaataacgaataaatcaaatgtgtaaacattaataagctataaataagtattgcattaatttcaccacataaaagtc 15185  T

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Target: scaffold0116; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 15099 - 15054
Alignment:
Q  141 cacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  15099 cacaaaaaattggtgttacaatttcgaccccaaaatatacgtcggt 15054  T

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Target: scaffold0201 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 23168 - 23254
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23168 attaaatggaatgtaataacgaatatatcaaatgcttaaacattaataagctataaataagtattgcattagtttcaccacataaaa 23254  T

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Target: scaffold0201; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 23283 - 23321
Alignment:
Q  148 aattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  23283 aattggcgttacaatttcgaccccaaaatatatgtcggt 23321  T

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Target: scaffold0219 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 19253 - 19164
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  19253 attaaatgaaatgtaataacgaataaatcaagtgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 19164  T

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Target: scaffold0057 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 22392 - 22481
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  22392 attaaatgaaatgtaataatgaataaatcaaatgcgtaaacattaataacgaataaataagtattgcactagtttcaccacataaaagtc 22481  T

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Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 22529 - 22578
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  22529 tggccacaaaaaattggcgttacaattttgaccccaaagtatacgtcggt 22578  T

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Target: scaffold0794 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 1070 - 981
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgcgtacacattaataagctataaataagtattgcactagtttcaccacataaaagtc 105  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||   |||||||||||| ||| |||||||||||||||||||||    
T  1070 attatatgaaatgtaataacgaataaatcaaatgcgtaaacattaataacgaataaataagtatcgcattagtttcaccacataaaagtc 981  T

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Target: scaffold0794; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 933 - 885
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  933 tggccacaaaaaattggtgtcacaatttcga-cccaaaatatacgtcggt 885  T

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Target: scaffold0494 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 4645 - 4558
Alignment:
Q  16 attaaatggaatgtaataacgaataaatcaaatgc-gtacacattaataagctataaataagtattgcactagtttcaccacataaaa 102  Q
    |||||||||||||||||||||||||||| |||||| | | ||||||| ||||||||||| ||||||||| || |||| ||||||||||    
T  4645 attaaatggaatgtaataacgaataaatgaaatgcggaaaacattaaaaagctataaattagtattgcattattttctccacataaaa 4558  T

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Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 4486 - 4443
Alignment:
Q  143 caaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||| |||| |||| |||||    
T  4486 caaaaaattggcgttacaatttcgacccaaaaaaatacatcggt 4443  T

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Target: scaffold0341 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 13826 - 13875
Alignment:
Q  137 tggccacaaaaaattggcgttacaatttcgaccccaaaatatacgtcggt 186  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  13826 tggccacaaaaaattggcgttacaatttcgaccctaaaaaatacgtcggt 13875  T

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