View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20070_low_35 (Length: 226)
Name: NF20070_low_35
Description: NF20070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20070_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 44565905 - 44566100
Alignment:
| Q |
16 |
aagaagaataatgttagtaaatacaacatggaaaaatagttttacatagtgcctttaagtatttttggggttgacctggcaatttctcacgtgcattgtg |
115 |
Q |
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| T |
44565905 |
aagaagaataatgttagtaaatacaacatggaaaaatagttttacatagtgcctttaagtatttttggggttgacctggcaatttctcacgtgcattgtg |
44566004 |
T |
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| Q |
116 |
acatgatggtatcaaccggacgaatattgcgggcctatacaattttcctttcaccatgatttgatcactttagtgtctgtaataaaagtaatatgt |
211 |
Q |
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| T |
44566005 |
atatgatggtatcaaccggacgaatattgcgggcctatacaattttcctttcaccatgatatgatcactttagtgtctgtaataaaagtaatatgt |
44566100 |
T |
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