View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20071_high_10 (Length: 497)
Name: NF20071_high_10
Description: NF20071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20071_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 7 - 482
Target Start/End: Complemental strand, 32237617 - 32237142
Alignment:
| Q |
7 |
tagataatacttgaattgaaaatgagtcgatctgataccaacttgttttagttcgattcaactcaaattacaagaatgatccaagatgtccaacgtagca |
106 |
Q |
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||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||| | |
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| T |
32237617 |
tagataatacttgaattgaaaatgagtcgatctaagaccaacttgttttagtttgattcaacttaaattacaagaatgatctaagatatccaacgtagga |
32237518 |
T |
|
| Q |
107 |
catccatgtattttatttataaagtgggaagtttttaaattctattagtatctaagttatttaaaaacatggatactaatcaattagaagtaagaaaatc |
206 |
Q |
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|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32237517 |
catccatgtattttatttttaaagtgggaaatttttaaattctattagtatctaagttatttaaaaacatcgatactaatcaattagaagtaagaaaatc |
32237418 |
T |
|
| Q |
207 |
aattaggttaacgtcataaacaacaaggagtcaaacacagtcatctatacgaaatgattaattaatgatcaacattgtgtcacacgaaatcatttttaca |
306 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32237417 |
aattaggtttacgtcataaacaacaaggagtcaaacacagtcatctatacgaaatgattaattaatgatcaacattgtgtcacacgaaatcatttttaca |
32237318 |
T |
|
| Q |
307 |
agattacataacggatgatgtagcttccccttttagcaaccaatcacatcccatccccatgctcttaacagtttctaccttaatgaatgatggattgaag |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32237317 |
agattacataacggatgatgtagcttccccttttagcaaccaatcacatcccatccccatgctcttaacagtttctaccttaatgaatgatggattcaag |
32237218 |
T |
|
| Q |
407 |
tttcaaattacacgttcttttcaaaattatttggtgttaacatgtctctttaggacacaaactactattgatatat |
482 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
32237217 |
tttcaaattacacgttcttttcaaaattatttggtgttaacatgtctctttaggacacaaactactactaatatat |
32237142 |
T |
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