View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20071_low_26 (Length: 420)
Name: NF20071_low_26
Description: NF20071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20071_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Complemental strand, 24914469 - 24914062
Alignment:
| Q |
1 |
aagagttaaggatggacaatgatggtggcatctctttggaaggttggttccttaatagctttaaaatcatttgatatttgaatacataatttatcttttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24914469 |
aagagttaaggatggacaatgatggtggcatctctttggaaggttggttccttagtagctttaaaatcatttgatatttgaatacataatttatcttttg |
24914370 |
T |
|
| Q |
101 |
gaatgttaagtttggcatcttatctatttgcatgtccattttaatttttaaagcatctcctttgaactttgcattttgcttttggcagcaattttagagg |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24914369 |
gaatgttaagcttggcatcttatctatttgcatgtccagtttaatttttaaagcatctcctttgaactttgcattttgcttttggcagcaattttagagg |
24914270 |
T |
|
| Q |
201 |
ccgcaaaggccctattggagcataacaaacatctcttgagtttcatcgatggaaatcttgcttctattgagacttttaattcaacaaaggtaaatcttgc |
300 |
Q |
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|||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
24914269 |
ccgcaaaggcactattggagcacaacaaacagctcttaagtttaatcgatggaaatcttgcttctattgagacttttaattcaacgaaggtaaatcttgc |
24914170 |
T |
|
| Q |
301 |
tgtttttgatctgaactgattttgttaaacctattgtacataaaaataatctcctttgttatgtcataatcaatgttctattactggttttcaatcttat |
400 |
Q |
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|| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24914169 |
tg-ttttgatctgaactgatttagttaaacctattgtacatgaaaataatctcctttgttatgtcataatcaatgttctattactggttttcaatcttat |
24914071 |
T |
|
| Q |
401 |
atctatatt |
409 |
Q |
| |
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||||||||| |
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|
| T |
24914070 |
atctatatt |
24914062 |
T |
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