View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20072_high_2 (Length: 866)
Name: NF20072_high_2
Description: NF20072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20072_high_2 |
 | |
|
| [»] scaffold0062 (1 HSPs) |
| | |
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Alignment Details
Target: chr8 (Bit Score: 454; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 16 - 522
Target Start/End: Complemental strand, 6330585 - 6330067
Alignment:
| Q |
16 |
atgaaggcgaggcttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaa |
115 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6330585 |
atgaaggcgaggtttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttggctgaaattgaggtaaagctcattgaaaggaa |
6330486 |
T |
|
| Q |
116 |
caatgacgagtcattgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcct |
215 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6330485 |
caatgatgagtcattgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcct |
6330386 |
T |
|
| Q |
216 |
aatagtatctccatctaaagaatttgatggtttgttgctttgctctgaataaaatgtgtgaagttgtcaaattccctcatcgtcatggtcttgttattat |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6330385 |
aatagtatctccatctaaagaatttgatggtatgttgctttgctctgaataaaatgtgtgaagttgtcaaattccctcatcgtcatggtcttgttattat |
6330286 |
T |
|
| Q |
316 |
gtatgtttgtttgtttgcttgcttttatgttttactttacatcaataagaagttcttaagatgtgtttacctcttgtatgtgtaatacatgtgatatgat |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6330285 |
gtatgtttgtttgtttgcttgcttttatgttttactatacatcaataagaagttcttaagatgtgtttacctcttgtatgtgtaatacatgtgatatgat |
6330186 |
T |
|
| Q |
416 |
attgaaatgcattagtttaagtttggaaaaaatgaattaatgaccccaaggttt------------tagtgcgatatggcatgataaaaagatgatagtg |
503 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6330185 |
aatgaaatgcattagtttaagtttggaaaaaatgaattaatgaccccaaggtttgtgcaaacctagtagtgcgatatggcatgataaaaagatgatagtg |
6330086 |
T |
|
| Q |
504 |
ctgaaaaagtaatgtacaa |
522 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6330085 |
ctgaaaaagtaatgtacaa |
6330067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 520 - 852
Target Start/End: Complemental strand, 6330020 - 6329694
Alignment:
| Q |
520 |
caaaaagtaataacagttaaagtgaattatattttaccttaaggctttagtttcagtcttttacatcaaacaattttaacctatgactagagatcatggt |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
6330020 |
caaaaagtaataacagttaaagtgaattatattttaccttaatgctttagtttcgaccttttacatcaaacaattttaaactatgactagaaatcatggt |
6329921 |
T |
|
| Q |
620 |
gccttcaagttgttacactgaccattattaggtagagcacatat--ttccatgaaaattccgccatcgatcggttcttctctgcagctcccatttctttc |
717 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6329920 |
gccttcaagttgttacactgaccatta---ggtagagcacatatatttccatgaaaattccgccatcgatcggttcttctctgcagctcccatttctttc |
6329824 |
T |
|
| Q |
718 |
catcacctatttgtttccaaagaaactgttatgtacaagaagcatatgtagcctattgaaaataaaagaaaataagttgcaaacataacaaatccatata |
817 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6329823 |
catcacctatttgtttccaaagaaactgt-----acaagaagcatatgtagcctattgaaaataaaagaaaataagttgcaaacataacaaatccatata |
6329729 |
T |
|
| Q |
818 |
caaccctgtaaatccacacaaataaatgaagatga |
852 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
6329728 |
caaccctgtaaatccacacaaataaatgaagatga |
6329694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 16 - 414
Target Start/End: Complemental strand, 6320123 - 6319720
Alignment:
| Q |
16 |
atgaaggcgaggcttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaa |
115 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
6320123 |
atgaaggtgaggcttggacttttgattcacagccattagaagctttcaagaggtttggaaggaagttggctgaaattgaggcaaagctcatcaaaaggaa |
6320024 |
T |
|
| Q |
116 |
caatgacgagtcattgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcct |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
6320023 |
caatgatgagtcattgagaaaccgatacgggcctgtgaagatgccatacactctgctttatccttctagtgaggaaggattgactggcagaggcattcct |
6319924 |
T |
|
| Q |
216 |
aatagtatctccatctaaagaatttgatggtttgttgctttgctctgaataaaatgtgtgaagttgtcaaattccctcatcgtcatggtcttgttattat |
315 |
Q |
| |
|
|||||||||||||| ||| || ||| || ||||||| ||||| | ||||||||||||||||| |||||||| ||||| |||||||| |||| |||| |
|
|
| T |
6319923 |
aatagtatctccatttaatgagtttcattgtttgttctgttgctttaaataaaatgtgtgaagtagtcaaattacctca---tcatggtcatgttgttat |
6319827 |
T |
|
| Q |
316 |
gtatgtttgtttgtttgcttgct--------tttatgttttactttacatcaataagaagttcttaagatgtgtttacctcttgtatgtgtaatacatgt |
407 |
Q |
| |
|
|| |||||||||||||| ||| | |||||| ||||||||||||||||||||| | || | ||||||| |||||||||||||||| | |||||| |
|
|
| T |
6319826 |
gtttgtttgtttgtttgtttgtttgttggtatttatggtttactttacatcaataagaaatactcatgatgtgtgtacctcttgtatgtgttagacatgt |
6319727 |
T |
|
| Q |
408 |
gatatga |
414 |
Q |
| |
|
||||||| |
|
|
| T |
6319726 |
gatatga |
6319720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 29 - 252
Target Start/End: Complemental strand, 6422937 - 6422714
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
||||||||| ||| |||||||| ||| || | ||||| ||||| |||||||||| |||||||||||| |||||| || |||||||| |||||||||| |
|
|
| T |
6422937 |
ttggacttctgatgcacagccaaaagaggcctacaagaagtttgcaaggaagttggctgaaattgaggaaaagctagttaaaaggaacgctgacgagtca |
6422838 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||| | |||| |
|
|
| T |
6422837 |
ttgagaaaccgatacgggcctgtgaagatgccatacactctgctttatccttctagtgaagaaggattgactttcagaggcattcccaacagtgtttcca |
6422738 |
T |
|
| Q |
229 |
tctaaagaatttgatggtttgttg |
252 |
Q |
| |
|
|||| | ||| | ||||||||||| |
|
|
| T |
6422737 |
tctagaaaatgtcatggtttgttg |
6422714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 6351020 - 6350814
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
|||||||||||||||||| ||| |||||| |||||||||||||||| ||||||| |||||||||| || |||| | ||||||||||||| ||| || |
|
|
| T |
6351020 |
ttggacttcagattcacaaccaaaagaagccttcaagaggtttggaaagaagttggctgaaattgaacagaaactcactcaaaggaacaatgatgagaca |
6350921 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
|||||||| || ||||| || ||||| |||||||| ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6350920 |
ttgagaaatcggtacggaccagtgaagatgccatatactctactttatccttctagtgaggaaggattgacttgccgaggcattcctaatagtatctcca |
6350821 |
T |
|
| Q |
229 |
tctaaag |
235 |
Q |
| |
|
||||||| |
|
|
| T |
6350820 |
tctaaag |
6350814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 6287482 - 6287277
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
||||||||| |||||||| ||| ||| ||||||||||||||||||| |||| || ||||||||||| ||| |||| | |||||||||| || ||| || |
|
|
| T |
6287482 |
ttggacttctgattcacaaccaaaagaggctttcaagaggtttggaaagaagctggctgaaattgagaaaaaactcactcaaaggaacaacgatgagaca |
6287383 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
|||| || || || || || ||||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6287382 |
ctgaggaatcgttatggaccagtgaagatgccatatactttgctttatccttctagtgaggaaggattgacttgcagaggcattcccaatagtatctcca |
6287283 |
T |
|
| Q |
229 |
tctaaa |
234 |
Q |
| |
|
|||||| |
|
|
| T |
6287282 |
tctaaa |
6287277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 29 - 232
Target Start/End: Complemental strand, 6408911 - 6408708
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
|||||||| |||||| ||||| |||| || ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||| || || ||| |
|
|
| T |
6408911 |
ttggacttacgattcagagccagtagaggccttcaagaagtttggaaagaagttggctgaaattgagcaaaagctcattgaaaggaacaacgatgaatca |
6408812 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
||||||||| | | ||||||||||| |||||||||||| |||| |||||||| |||||| ||||||||||| |||||||||||| || ||| |||||| |
|
|
| T |
6408811 |
ttgagaaacaggaatgggcctgtgaagatgccatacactgtgctctatccttcaagtgagccaggattgactttcagaggcattcccaacagtgtctcca |
6408712 |
T |
|
| Q |
229 |
tcta |
232 |
Q |
| |
|
|||| |
|
|
| T |
6408711 |
tcta |
6408708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 6361904 - 6361700
Alignment:
| Q |
30 |
tggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtcat |
129 |
Q |
| |
|
|||||||| |||||||||||| ||| | || ||||||||||||| ||||||| ||||||||||| ||| |||||| ||||||||||||| ||| || |
|
|
| T |
6361904 |
tggacttctgattcacagccaaaagagtcctttaagaggtttggaaagaagttggctgaaattgagcaaaaactcattcaaaggaacaatgatgagacac |
6361805 |
T |
|
| Q |
130 |
tgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctccat |
229 |
Q |
| |
|
|||| || || |||| || ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| || |
|
|
| T |
6361804 |
tgaggaatcgtaacggaccagtgaagatgccttacactctgctttatccttctagtgaggaaggattgacttgcagaggcattcccaacagtgtctctat |
6361705 |
T |
|
| Q |
230 |
ctaaa |
234 |
Q |
| |
|
||||| |
|
|
| T |
6361704 |
ctaaa |
6361700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 29 - 232
Target Start/End: Complemental strand, 6389662 - 6389459
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
|||||||| |||||| ||||| |||| || ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||| || || ||| |
|
|
| T |
6389662 |
ttggacttacgattcagagccagtagaggccttcaagaagtttggaaagaagttggctgaaattgagcaaaagctcattgaaaggaacaacgatgaatca |
6389563 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
||||||||| | | ||||| ||||| |||||||||||| |||| |||||||| |||||| ||||||||||| |||||||||||| || ||| |||||| |
|
|
| T |
6389562 |
ttgagaaacaggaatgggccagtgaagatgccatacactgtgctctatccttcaagtgagccaggattgactttcagaggcattcccaacagtgtctcca |
6389463 |
T |
|
| Q |
229 |
tcta |
232 |
Q |
| |
|
|||| |
|
|
| T |
6389462 |
tcta |
6389459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 6273231 - 6273026
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||||||| || |||| |||||| |||||||||| ||| |||| | ||||||||||||| ||| | |
|
|
| T |
6273231 |
ttggacttctgattcacaaccattagaggctttcaagagattcggaacaaagttggctgaaattgaacaaaaactcactcaaaggaacaatgatgagact |
6273132 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
| || || ||||| || || ||||| ||||| || ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6273131 |
ctaaggaatcgatatggaccagtgaagatgccgtatactttgctttatccttctagtgaggaaggattgacttgcagaggcattcctaacagtatctcca |
6273032 |
T |
|
| Q |
229 |
tctaaa |
234 |
Q |
| |
|
|||||| |
|
|
| T |
6273031 |
tctaaa |
6273026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 7470162 - 7469958
Alignment:
| Q |
30 |
tggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtcat |
129 |
Q |
| |
|
|||||||| |||||||||||| | | || | ||||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||||||| ||| || |
|
|
| T |
7470162 |
tggacttctgattcacagccaaaacaggcctacaagaagtttggaaagaagttgtctgaaattgagaaaaacctcattcaaaggaacaatgatgagacac |
7470063 |
T |
|
| Q |
130 |
tgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctccat |
229 |
Q |
| |
|
|||| || ||| | || |||||||| ||| |||| || |||||||||||| |||||||| |||||||||||| |||||||||||| || ||| |||| || |
|
|
| T |
7470062 |
tgaggaatcgaaatggacctgtgaagatgtcatatacactgctttatcctactagtgaggaaggattgacttccagaggcattcccaacagtgtctctat |
7469963 |
T |
|
| Q |
230 |
ctaaa |
234 |
Q |
| |
|
||||| |
|
|
| T |
7469962 |
ctaaa |
7469958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 7457728 - 7457556
Alignment:
| Q |
62 |
caagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtcattgagaaaccgatacgggcctgtgaatatgcca |
161 |
Q |
| |
|
||||| |||||||| ||||||| ||||||| ||| ||| |||||| ||||||||||||| ||| || |||| || ||| | || |||||||| |||||| |
|
|
| T |
7457728 |
caagaagtttggaaagaagttggctgaaatcgagaaaaacctcattcaaaggaacaatgatgagacactgaggaatcgaaatggacctgtgaagatgcca |
7457629 |
T |
|
| Q |
162 |
tacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctccatctaaa |
234 |
Q |
| |
|
|| || |||||||||||| |||||||| |||||||||||| |||||||||||| || ||| |||||||||||| |
|
|
| T |
7457628 |
tatacactgctttatcctactagtgaggaaggattgacttccagaggcattcccaacagtgtctccatctaaa |
7457556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 6368680 - 6368475
Alignment:
| Q |
29 |
ttggacttcagattcacagccattagaagctttcaagaggtttggaaggaagttgtctgaaattgaggtaaagctcattgaaaggaacaatgacgagtca |
128 |
Q |
| |
|
||||||||| ||| || ||||| ||||||| | ||| | ||||| || ||| ||| ||||||||||| | || ||||| ||||||||||| | |||||| |
|
|
| T |
6368680 |
ttggacttctgatccaaagccagtagaagcctacaaaaagtttgcaaagaaattgattgaaattgaggaagagttcattcaaaggaacaataatgagtca |
6368581 |
T |
|
| Q |
129 |
ttgagaaaccgatacgggcctgtgaatatgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctcca |
228 |
Q |
| |
|
|||| |||| | || ||||||||||| | ||||||||||| ||||||||||| |||| |||||||||| ||||||| ||||| || ||| |||||| |
|
|
| T |
6368580 |
ttgaaaaacaggtatgggcctgtgaagtttccatacactcttctttatccttccagtggaccaggattgactggcagagggattcccaacagtgtctcca |
6368481 |
T |
|
| Q |
229 |
tctaaa |
234 |
Q |
| |
|
|||||| |
|
|
| T |
6368480 |
tctaaa |
6368475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 744
Target Start/End: Complemental strand, 6317625 - 6317563
Alignment:
| Q |
682 |
atcgatcggttcttctctgcagctcccatttctttccatcacctatttgtttccaaagaaact |
744 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
6317625 |
atcgaccggctcttctctgcatctcccatttccttccatgacctatttgtttccaaagaaact |
6317563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 42691824 - 42691744
Alignment:
| Q |
156 |
atgccatacactctgctttatccttctagtgagaaaggattgacttgcagaggcattcctaatagtatctccatctaaaga |
236 |
Q |
| |
|
||||| || ||| ||||| |||||||||||||| ||||| | |||| ||||| ||||||||||||||||| |||| |||| |
|
|
| T |
42691824 |
atgccttatactttgcttcatccttctagtgaggaaggactaacttttagaggaattcctaatagtatctctatctgaaga |
42691744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0062 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:
Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 764 - 801
Target Start/End: Complemental strand, 44220 - 44183
Alignment:
| Q |
764 |
tgtagcctattgaaaataaaagaaaataagttgcaaac |
801 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
44220 |
tgtagcctaatgaaaataaaagaaaataagttacaaac |
44183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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