View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20072_high_31 (Length: 314)
Name: NF20072_high_31
Description: NF20072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20072_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 38325956 - 38325678
Alignment:
| Q |
18 |
tatagcaaaaatagcatccagtgttatgatagtaggagcaatagaagcaggaatttatgatcaattgataaaatctctctctaactgttgcgaataaaac |
117 |
Q |
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| T |
38325956 |
tatagcaaaaatagcatccagtgttatgatagtaggagcaatagaagcaggaatttatgatcaattgataaaatctctctctaactgttgcgaataaaac |
38325857 |
T |
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| Q |
118 |
cacttatgagagcctccacccaacatcataagttttttgtgtgcacaagagcaggaatttcgaacataataatgagtgctcggcagcaacaacgaccagc |
217 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38325856 |
cacttatgagagcctccacccaacatcataaattttttgtgtgcacaagagcaggaatttcgaacataataatgagtgctcggcagcaacaacgaccagc |
38325757 |
T |
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| Q |
218 |
cggccaatatgctcagctcaattgaaggaactcattgatgatcgccacagcttagcgcccaaatgcaaaaatcagcaca |
296 |
Q |
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|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
38325756 |
cggctaatatgctcagctcaattgaaagaactcattgatgatcgccacagcttagcgcccaaatgcagaaatcagcaca |
38325678 |
T |
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