View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20074_high_36 (Length: 258)
Name: NF20074_high_36
Description: NF20074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20074_high_36 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 43016732 - 43016956
Alignment:
| Q |
16 |
actatatttaccaaagaaaaatccacacttacaagaagtccaagacacctctggaaactgttttttgtacagaaaactgaatgcaagaaacaggagagag |
115 |
Q |
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| T |
43016732 |
actatatttaccaaagaaaaatccacacttacaagaagtccaagacacctctggaaactgttttttgtacagaaaactgaatgcaagaaacaggagagag |
43016831 |
T |
|
| Q |
116 |
ctcccaaagcaatcaattccaaacacagaaccaatcagggctgcagcttgacacaccagtagaaaacccccaaacacagtcgtgagcttttgacatcgtt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43016832 |
ctcccaaagcaatcaattccaaacacagaaccaatcagggctgcagcttgacacaccagtagaaaacccccaaacacagtcgtgagcttttgacaccgtt |
43016931 |
T |
|
| Q |
216 |
ttcattcgctggtggaagaaaagaa |
240 |
Q |
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||||||||||||||||||||||||| |
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| T |
43016932 |
ttcattcgctggtggaagaaaagaa |
43016956 |
T |
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