View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20074_low_14 (Length: 399)
Name: NF20074_low_14
Description: NF20074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20074_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 18 - 391
Target Start/End: Complemental strand, 9199979 - 9199606
Alignment:
| Q |
18 |
aagtgaaccaacacttgttccaccatctgaagaaacaaagaaaggaatgtatttcctatcaaaccttgatcaaaacattgctgtaattgttagaactgtt |
117 |
Q |
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| T |
9199979 |
aagtgaaccagcacttgttccaccatctgaagaaacaaagaaaggaatgtatttcttatcaaaccttgaccaaaacattgctgtaattgttagaactgtt |
9199880 |
T |
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| Q |
118 |
tattgtttcaaaaatcaagagaagggaaatgagaatgcttgtgaagtgattaaggatgcattgaagaatgttcttgtgcattattaccctcttgctggga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9199879 |
tattgtttcaaaaatcaagagaagggaaatgagaatgcttgtgaagtgattaaggatgcattgaagaatgttcttgtgcattattaccctcttgctggga |
9199780 |
T |
|
| Q |
218 |
gattaagtataagctcagagggtaagctgattgtggattgtactggagaaggtgctctttttgttgaggctgaagctaattgttcaatggaagaaattgg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9199779 |
gattaagtataagctcagagggtaagctgattgtggattgtactggagaaggtgctctttttgttgaggctgaagctaattgttcaatggaagaaattgg |
9199680 |
T |
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| Q |
318 |
tgatattacaaaacctgatccaaggactcttggtatgttggtttatgatattcctgatgctaaacatattcttc |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9199679 |
tgatattacaaaacctgatccaaggactcttggtatgttggtttatgatattcctgatgctaaacatattcttc |
9199606 |
T |
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