View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20076_high_18 (Length: 453)

Name: NF20076_high_18
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20076_high_18
NF20076_high_18
[»] scaffold0015 (1 HSPs)
scaffold0015 (11-437)||(3996-4424)
[»] chr2 (29 HSPs)
chr2 (77-147)||(19597898-19597968)
chr2 (96-152)||(3725208-3725264)
chr2 (29-74)||(17249122-17249167)
chr2 (17-74)||(29574591-29574648)
chr2 (29-74)||(32448594-32448639)
chr2 (18-74)||(10929745-10929801)
chr2 (87-148)||(28533975-28534036)
chr2 (17-74)||(31128743-31128800)
chr2 (85-145)||(4264493-4264553)
chr2 (18-74)||(4778833-4778889)
chr2 (96-144)||(4904175-4904223)
chr2 (96-148)||(8805898-8805950)
chr2 (17-73)||(33585698-33585754)
chr2 (18-73)||(1421757-1421812)
chr2 (29-72)||(10237191-10237234)
chr2 (85-148)||(11812701-11812764)
chr2 (96-151)||(27249148-27249203)
chr2 (96-151)||(36234037-36234092)
chr2 (17-74)||(7448327-7448384)
chr2 (29-74)||(27097381-27097426)
chr2 (29-74)||(28871763-28871808)
chr2 (102-151)||(32197798-32197847)
chr2 (96-148)||(459271-459323)
chr2 (96-152)||(27949454-27949510)
chr2 (29-73)||(31210582-31210626)
chr2 (29-73)||(31788537-31788581)
chr2 (85-121)||(33760212-33760248)
chr2 (96-148)||(37614122-37614174)
chr2 (23-63)||(38445257-38445297)
[»] chr8 (32 HSPs)
chr8 (29-151)||(29617246-29617356)
chr8 (87-145)||(14916205-14916263)
chr8 (29-74)||(15344380-15344425)
chr8 (29-74)||(15433445-15433490)
chr8 (29-74)||(15524749-15524794)
chr8 (10-151)||(8981170-8981299)
chr8 (17-73)||(37971356-37971412)
chr8 (87-150)||(21237798-21237861)
chr8 (29-72)||(43833968-43834011)
chr8 (96-151)||(44099931-44099986)
chr8 (99-151)||(19876243-19876295)
chr8 (17-73)||(20553201-20553257)
chr8 (17-73)||(20559704-20559760)
chr8 (17-73)||(20571266-20571322)
chr8 (85-149)||(24099271-24099335)
chr8 (85-148)||(3240390-3240453)
chr8 (23-74)||(8443477-8443528)
chr8 (96-151)||(9619354-9619409)
chr8 (96-151)||(11464203-11464258)
chr8 (96-151)||(43192343-43192398)
chr8 (29-74)||(1236669-1236714)
chr8 (29-74)||(1239369-1239414)
chr8 (96-149)||(2655904-2655957)
chr8 (98-147)||(10331102-10331151)
chr8 (19-72)||(18890661-18890714)
chr8 (96-145)||(27747110-27747159)
chr8 (18-63)||(31013569-31013614)
chr8 (33-74)||(33347497-33347538)
chr8 (99-148)||(35580492-35580541)
chr8 (98-150)||(8826220-8826271)
chr8 (99-151)||(11196921-11196973)
chr8 (96-148)||(23851491-23851543)
[»] chr6 (16 HSPs)
chr6 (16-73)||(1933653-1933710)
chr6 (85-149)||(30493540-30493604)
chr6 (76-151)||(26588481-26588556)
chr6 (78-148)||(34185704-34185774)
chr6 (29-73)||(3913548-3913592)
chr6 (96-151)||(8496992-8497047)
chr6 (96-151)||(23947315-23947370)
chr6 (96-147)||(28981187-28981238)
chr6 (18-63)||(606286-606331)
chr6 (29-74)||(28981248-28981293)
chr6 (17-54)||(31296911-31296948)
chr6 (86-146)||(19164722-19164782)
chr6 (18-74)||(30493603-30493659)
chr6 (17-73)||(32327179-32327235)
chr6 (18-74)||(33053131-33053187)
chr6 (87-143)||(34222812-34222868)
[»] chr1 (26 HSPs)
chr1 (98-151)||(16262869-16262922)
chr1 (17-151)||(47132911-47133033)
chr1 (96-151)||(34519161-34519216)
chr1 (29-74)||(24583023-24583068)
chr1 (29-74)||(44543345-44543390)
chr1 (85-149)||(41994437-41994501)
chr1 (78-148)||(29184222-29184292)
chr1 (17-74)||(21947580-21947637)
chr1 (29-74)||(49626986-49627031)
chr1 (96-151)||(9687201-9687256)
chr1 (85-151)||(24582959-24583024)
chr1 (16-74)||(25564071-25564129)
chr1 (18-72)||(36775673-36775727)
chr1 (96-150)||(39927551-39927605)
chr1 (89-151)||(44543281-44543342)
chr1 (98-151)||(5701288-5701341)
chr1 (94-143)||(13144839-13144888)
chr1 (96-149)||(19715892-19715945)
chr1 (98-151)||(50272139-50272192)
chr1 (17-74)||(51916627-51916684)
chr1 (98-146)||(5324557-5324605)
chr1 (18-74)||(14872712-14872768)
chr1 (29-73)||(32395072-32395116)
chr1 (29-73)||(35484365-35484409)
chr1 (86-122)||(48750222-48750258)
chr1 (17-61)||(49504557-49504601)
[»] chr4 (37 HSPs)
chr4 (18-151)||(52944336-52944457)
chr4 (23-150)||(36204347-36204467)
chr4 (96-150)||(22038831-22038885)
chr4 (85-151)||(28857427-28857493)
chr4 (96-150)||(35964972-35965026)
chr4 (85-150)||(18048909-18048974)
chr4 (29-74)||(47320386-47320431)
chr4 (68-148)||(6155227-6155307)
chr4 (96-151)||(868199-868254)
chr4 (96-147)||(10359544-10359595)
chr4 (18-73)||(24099030-24099085)
chr4 (29-72)||(33332543-33332586)
chr4 (17-74)||(4142714-4142771)
chr4 (17-74)||(22611273-22611330)
chr4 (87-148)||(51888231-51888292)
chr4 (17-74)||(53811118-53811175)
chr4 (96-151)||(4643895-4643950)
chr4 (18-73)||(13634206-13634261)
chr4 (18-73)||(19853475-19853530)
chr4 (96-151)||(25273920-25273975)
chr4 (96-151)||(29965672-29965727)
chr4 (96-151)||(44947449-44947504)
chr4 (96-151)||(47417699-47417754)
chr4 (96-151)||(50766509-50766564)
chr4 (96-151)||(53616647-53616702)
chr4 (96-146)||(7393301-7393351)
chr4 (77-151)||(9048689-9048763)
chr4 (96-150)||(9283949-9284003)
chr4 (17-63)||(21686204-21686250)
chr4 (17-71)||(38166192-38166246)
chr4 (96-150)||(43154011-43154065)
chr4 (98-151)||(10389753-10389806)
chr4 (96-145)||(38166258-38166307)
chr4 (85-146)||(48351204-48351265)
chr4 (96-149)||(49410262-49410315)
chr4 (96-148)||(37465511-37465563)
chr4 (98-150)||(46991129-46991181)
[»] chr3 (33 HSPs)
chr3 (17-149)||(35175410-35175530)
chr3 (85-149)||(29249239-29249303)
chr3 (85-151)||(12947292-12947358)
chr3 (85-150)||(4396352-4396417)
chr3 (16-72)||(29922128-29922184)
chr3 (16-72)||(29971281-29971337)
chr3 (17-122)||(50194297-50194390)
chr3 (85-151)||(29239347-29239413)
chr3 (32-74)||(53807835-53807877)
chr3 (89-146)||(4821816-4821873)
chr3 (87-144)||(48199788-48199845)
chr3 (87-148)||(52496934-52496995)
chr3 (29-73)||(14859560-14859604)
chr3 (18-74)||(52923080-52923136)
chr3 (17-76)||(12050610-12050669)
chr3 (96-151)||(12116120-12116175)
chr3 (96-151)||(31794093-31794148)
chr3 (96-151)||(35499195-35499250)
chr3 (96-151)||(36734689-36734744)
chr3 (96-151)||(36906144-36906199)
chr3 (18-73)||(45568408-45568463)
chr3 (96-147)||(46934668-46934719)
chr3 (96-150)||(32607492-32607546)
chr3 (29-74)||(628897-628942)
chr3 (17-74)||(7448876-7448933)
chr3 (17-74)||(7457018-7457075)
chr3 (17-74)||(10233139-10233196)
chr3 (98-151)||(21488113-21488166)
chr3 (17-74)||(23799872-23799929)
chr3 (17-70)||(42460822-42460875)
chr3 (18-74)||(21431682-21431738)
chr3 (18-74)||(29239412-29239468)
chr3 (18-74)||(46304483-46304539)
[»] scaffold0039 (1 HSPs)
scaffold0039 (96-151)||(93111-93167)
[»] chr7 (29 HSPs)
chr7 (96-151)||(34773736-34773791)
chr7 (96-152)||(29617729-29617785)
chr7 (96-151)||(1448827-1448882)
chr7 (96-151)||(23786600-23786655)
chr7 (98-151)||(969478-969531)
chr7 (29-74)||(46822712-46822757)
chr7 (17-73)||(8001508-8001564)
chr7 (18-74)||(12141271-12141327)
chr7 (18-74)||(19296942-19296998)
chr7 (87-147)||(31482115-31482175)
chr7 (96-148)||(41553463-41553515)
chr7 (96-148)||(41553808-41553860)
chr7 (18-73)||(9450100-9450155)
chr7 (88-151)||(24069415-24069478)
chr7 (96-151)||(32521924-32521979)
chr7 (18-73)||(39171553-39171608)
chr7 (19-74)||(41553398-41553453)
chr7 (98-148)||(41554155-41554205)
chr7 (29-74)||(1769152-1769197)
chr7 (98-151)||(32684693-32684746)
chr7 (96-148)||(2843238-2843290)
chr7 (96-144)||(3267241-3267289)
chr7 (96-148)||(20116610-20116662)
chr7 (85-145)||(22087330-22087390)
chr7 (17-73)||(24069356-24069412)
chr7 (18-74)||(34899570-34899626)
chr7 (18-74)||(37837421-37837477)
chr7 (85-145)||(38880596-38880656)
chr7 (99-151)||(42067061-42067113)
[»] chr5 (12 HSPs)
chr5 (96-151)||(41184437-41184492)
chr5 (29-74)||(8088186-8088231)
chr5 (11-73)||(35920951-35921014)
chr5 (18-74)||(13007298-13007354)
chr5 (87-131)||(31315932-31315976)
chr5 (18-74)||(34945462-34945518)
chr5 (18-74)||(38597866-38597922)
chr5 (96-151)||(2057835-2057890)
chr5 (96-147)||(7613055-7613106)
chr5 (23-74)||(9113693-9113744)
chr5 (96-151)||(10332577-10332632)
chr5 (96-151)||(34881745-34881800)
[»] scaffold0042 (2 HSPs)
scaffold0042 (96-147)||(92525-92576)
scaffold0042 (29-71)||(92470-92512)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-74)||(58050-58107)
[»] scaffold0426 (1 HSPs)
scaffold0426 (96-152)||(6329-6385)
[»] scaffold0088 (1 HSPs)
scaffold0088 (18-74)||(50846-50902)
[»] scaffold0014 (1 HSPs)
scaffold0014 (99-151)||(201372-201424)
[»] scaffold0347 (1 HSPs)
scaffold0347 (98-151)||(6035-6088)
[»] scaffold0017 (1 HSPs)
scaffold0017 (29-73)||(32721-32765)


Alignment Details
Target: scaffold0015 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 11 - 437
Target Start/End: Original strand, 3996 - 4424
Alignment:
Q  11 agaatatcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaat 110  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3996 agaataccatgtttccgtatatgcaacgttgacgtctaaatcattggttgaatctgtgattgaccatgtgatcaactgaagctggtctttcaatatgaat 4095  T
Q  111 caaacgaacaccacaataagacacgaaatcaaacaacgccgtgtccagatcattcagtcgtggtcttacggtgcaggtagattggggaac-ggagtactt 209  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  4096 caaacgaacaccacaataagacacgaaatcaaacaacgttgtgtccagatcattcagtcgtggtcttacggtgcaggtaggttggggaacgggagtactt 4195  T
Q  210 tcaatatttatcttttctttttggtctcctcttatgaacactctcctctaacgattttaatatatgaccatctccatttggataaataaaacacataata 309  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4196 tgaatatttatcttttctttttggtctcctcttatgaacactctcctctaacgattttaatatatgaccatctccatttggataaataaaacacataata 4295  T
Q  310 aactaaaatatttaggca-nnnnnnncacataggaagagacatagagataagtaacaacatgtaattccaacagaagaaaagtattctaatctttattgt 408  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4296 aactaaaatatttaggcattttttttcacataggaagagacatagagataagtaacaacatgtaattccaacagaagaaaagtattctaatctatattgt 4395  T
Q  409 aaaattacatataatgtaaacagcgttta 437  Q
    |||||||||||||||||||||||||||||    
T  4396 aaaattacatataatgtaaacagcgttta 4424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 19597968 - 19597898
Alignment:
Q  77 tgtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    |||||| |||||||| ||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||    
T  19597968 tgtgattaactgaagttggtctttcaataagaatcaaacgaacatcacaacaagacacaaaatcaaacaac 19597898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 3725264 - 3725208
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccgt 152  Q
    ||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||    
T  3725264 tctttcaatatgaatcaaacgaacaccacacaaagacgagaaatcaaacaacgccgt 3725208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 17249122 - 17249167
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  17249122 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 17249167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 29574591 - 29574648
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  29574591 tcatgcttccggatctgcaacgttggcgtccaaatcattgattgaatctgtgattgac 29574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 32448594 - 32448639
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  32448594 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 32448639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 10929801 - 10929745
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  10929801 catgcttccggatctgcaacgttgatgtccaaatcattgattgaatctgtgattgac 10929745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 28533975 - 28534036
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||| ||||   ||||||||||||||    
T  28533975 tgaagcttgtctttcaataggaatcaaacgaacaccgcaacaagatttgaaatcaaacaacg 28534036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 31128743 - 31128800
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  31128743 tcatgcttccggatctgcaacgttgacgcctaaatcattgattgaatttgtaattgac 31128800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 4264553 - 4264493
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    ||||||| || |||||||||| ||| |||| ||||||| ||||||||| ||||||||||||    
T  4264553 actgaagttgatctttcaataagaaccaaatgaacaccgcaataagacgcgaaatcaaaca 4264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4778889 - 4778833
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  4778889 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 4778833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 4904175 - 4904223
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaac 144  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||||||    
T  4904175 tctttcaatatgaaccaaacgaacaccgcaacaagacacaaaatcaaac 4904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 8805950 - 8805898
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||||||  |||||  ||||||||||||||    
T  8805950 tctttcaatatgaatcaaatgaacaccacacgaagacgggaaatcaaacaacg 8805898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33585698 - 33585754
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  33585698 tcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 33585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 1421812 - 1421757
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  1421812 catgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 1421757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 10237191 - 10237234
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||    
T  10237191 atctgcaacgttgacgtccaaatcattgattgaatttgtgattg 10237234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 11812764 - 11812701
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||||| |||||| ||| ||||||||  |||||| ||| ||||||| |||||||||||||    
T  11812764 actgaagctgatctttctataggaatcaaataaacaccgcaacaagacacaaaatcaaacaacg 11812701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 27249148 - 27249203
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  27249148 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 27249203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 36234092 - 36234037
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  36234092 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 36234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 7448384 - 7448327
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||||||||||||| |||| |||| |||||| ||| ||||||    
T  7448384 tcatgcttccggatctgcaacgttgacgtccaaattattggttgaatatgtaattgac 7448327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 27097381 - 27097426
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  27097381 atctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 27097426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 28871763 - 28871808
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  28871763 atctgcaacgtcgacgcctaaatcattggttgaatctgtaattgac 28871808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 32197798 - 32197847
Alignment:
Q  102 aatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||| ||||||| ||| |||||| |||||||||||| ||||    
T  32197798 aatatgaatcaaatgaacaccgcaacaagacaggaaatcaaacaatgccg 32197847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 459271 - 459323
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||| ||| |||||   |||||||||||||    
T  459271 tctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacg 459323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 27949510 - 27949454
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccgt 152  Q
    |||||| |||||||||||| ||||| | ||| |||||  ||||||||||||||||||    
T  27949510 tctttcgatatgaatcaaatgaacatcgcaagaagacgggaaatcaaacaacgccgt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 31210582 - 31210626
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  31210582 atctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 31210626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 31788581 - 31788537
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  31788581 atctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 31788537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 33760212 - 33760248
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacac 121  Q
    ||||||| || ||||||||||||||||||||||||||    
T  33760212 actgaagttgatctttcaatatgaatcaaacgaacac 33760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 37614122 - 37614174
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||| ||| |||||   |||||||||||||    
T  37614122 tctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacg 37614174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 38445297 - 38445257
Alignment:
Q  23 ttccgtatctgcaacgttgacgtctaaatcattgtttgaat 63  Q
    ||||| |||||||||||||||||| ||||||||| ||||||    
T  38445297 ttccggatctgcaacgttgacgtccaaatcattggttgaat 38445257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 29617246 - 29617356
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaata 128  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||            ||||| ||||||||||||| ||| |||||||||||| ||| |    
T  29617246 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac------------tgaagttggtctttcaataagaaccaaacgaacaccgcaaca 29617333  T
Q  129 agacacgaaatcaaacaacgccg 151  Q
    |||| |||||||||||| |||||    
T  29617334 agacgcgaaatcaaacagcgccg 29617356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 14916205 - 14916263
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    ||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  14916205 tgaagttggtctttcaatatgaaccaaacgaacaccgcaacaagacatgaaatcaaaca 14916263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15344425 - 15344380
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  15344425 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 15344380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15433490 - 15433445
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  15433490 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 15433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 15524794 - 15524749
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  15524794 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 15524749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 8981299 - 8981170
Alignment:
Q  10 aagaatatcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaa 109  Q
    ||||||| |||| ||||| ||||| |||||||||||| |||||||   |||||||||||||||||            ||| |||| ||||||||||| ||    
T  8981299 aagaataccatgcttccggatctgtaacgttgacgtccaaatcatcaattgaatctgtgattgac------------tgacgctgatctttcaatatcaa 8981212  T
Q  110 tcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
     |||||||||||| ||| ||||| |||||||||| |||||||    
T  8981211 acaaacgaacaccgcaacaagacgcgaaatcaaaaaacgccg 8981170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 37971412 - 37971356
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  37971412 tcatgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 37971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 21237861 - 21237798
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    |||| |||||||||||||||||| |||||||||||  ||| ||||| |||| ||||||||||||    
T  21237861 tgaaactggtctttcaatatgaaccaaacgaacactgcaacaagacgcgaagtcaaacaacgcc 21237798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 43833968 - 43834011
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||||||||||||||||||||||| |||||| ||||||||    
T  43833968 atctgcaacgttgacgtctaaatcattgattgaatttgtgattg 43834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 44099931 - 44099986
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||||||    
T  44099931 tctttcaatatgaatcaaatgaacaccgcaaaaagacgggaaatcaaacaacgccg 44099986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 19876295 - 19876243
Alignment:
Q  99 ttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||| ||||||||||| |||||  | |||||||||||||||    
T  19876295 ttcaatatgaatcaaatgaacaccacaagaagacggggaatcaaacaacgccg 19876243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 20553201 - 20553257
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  20553201 tcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 20553257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 20559704 - 20559760
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  20559704 tcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 20559760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 20571266 - 20571322
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  20571266 tcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 20571322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 24099271 - 24099335
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    |||||||||| | |||||||||||| |||| ||||||| ||| ||||  ||||||||||||||||    
T  24099271 actgaagctgatttttcaatatgaaccaaatgaacaccgcaacaagatgcgaaatcaaacaacgc 24099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 3240453 - 3240390
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||| | ||||||||||| || ||||| |||||||||| || || |||||||||||||||    
T  3240453 actgaagccgatctttcaatattaaccaaacaaacaccacaacaacacgcgaaatcaaacaacg 3240390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 8443477 - 8443528
Alignment:
Q  23 ttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| ||||||||||    
T  8443477 ttccggatctgcaacgttgatgtccaaatcattgattgaatatgtgattgac 8443528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 9619354 - 9619409
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  9619354 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 9619409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 11464258 - 11464203
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  11464258 tctttcaatatgaatcaaatgaacaccgcacaaagactagaaatcaaacaacgccg 11464203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 43192343 - 43192398
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||| |||||||||| ||||||||||| |||||   ||||||||||||||||    
T  43192343 tctttcaaaatgaatcaaatgaacaccacaagaagacggaaaatcaaacaacgccg 43192398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1236669 - 1236714
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| | ||||||| |||||| ||||||||||    
T  1236669 atctgcaacgttgacgtccagatcattgattgaatatgtgattgac 1236714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1239369 - 1239414
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| | ||||||| |||||| ||||||||||    
T  1239369 atctgcaacgttgacgtccagatcattgattgaatatgtgattgac 1239414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 2655957 - 2655904
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||    
T  2655957 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgc 2655904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 10331151 - 10331102
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    |||||||||||| |||| |||||||||||||||| | ||||| |||||||    
T  10331151 tttcaatatgaaccaaatgaacaccacaataagatatgaaattaaacaac 10331102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 18890661 - 18890714
Alignment:
Q  19 atgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    ||||||| | |||||||||||||||| | ||||||||| |||||| ||||||||    
T  18890661 atgtttctggatctgcaacgttgacgcccaaatcattgattgaatttgtgattg 18890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 27747110 - 27747159
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    ||||||||||||||||||| ||||||| ||| || ||| |||||||||||    
T  27747110 tctttcaatatgaatcaaatgaacaccgcaacaaaacaggaaatcaaaca 27747159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31013569 - 31013614
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaat 63  Q
    |||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  31013569 catgcttccgaatctgcaacgttgacgtccaaatcattgattgaat 31013614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 33347497 - 33347538
Alignment:
Q  33 gcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||| |||| ||||||||||| |||||||||||||||||    
T  33347497 gcaacgtcgacgcctaaatcattgattgaatctgtgattgac 33347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 35580541 - 35580492
Alignment:
Q  99 ttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||||||||||||||||||| ||| |||||   |||||||||||||    
T  35580541 ttcaatatgaatcaaacgaacaccgcaagaagacggaaaatcaaacaacg 35580492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 8826271 - 8826220
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||||    
T  8826271 tttcaatatgaatcaaa-gaacaccgcaacaagacacgaattcacacaacgcc 8826220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 11196973 - 11196921
Alignment:
Q  99 ttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||| ||||||| ||| |||||   ||||||||||||||||    
T  11196973 ttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaacaacgccg 11196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 23851491 - 23851543
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||| ||  |||||  ||||||||||||||    
T  23851491 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacg 23851543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1933653 - 1933710
Alignment:
Q  16 atcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  1933653 atcatgtttccggatctgcaacgttgacgtccaaatcattgattgaatctgtgattga 1933710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 30493604 - 30493540
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    ||||||| || |||||||||||||| ||||||||||||| || |||| |||||||||||||||||    
T  30493604 actgaagttgatctttcaatatgaaccaaacgaacaccagaacaagatacgaaatcaaacaacgc 30493540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 26588481 - 26588556
Alignment:
Q  76 gtgtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||  ||||||| || |||||||||||||| |||||||||||| ||| |||||  |||||||||||||||||    
T  26588481 gtgtgattgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagacgggaaatcaaacaacgccg 26588556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 34185704 - 34185774
Alignment:
Q  78 gtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||| |||||| || ||||||||||||||  ||| ||||||||||| ||||| | |||||||||||||    
T  34185704 gtgatcacctgaagttgatctttcaatatgaactaaaagaacaccacaacaagacgcaaaatcaaacaacg 34185774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 3913548 - 3913592
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||    
T  3913548 atctgcaacgttgacgtctaaatcattgcttgaatttgtaattga 3913592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 8497047 - 8496992
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  8497047 tctttcaatatgaatcaaatgaacaccgcacgaagacgagaaatcaaacaacgccg 8496992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 23947315 - 23947370
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| ||||   |||||||||||||||||    
T  23947315 tctttcaatatgaatcaaatgaacaccgcaaaaagatgggaaatcaaacaacgccg 23947370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 28981238 - 28981187
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    ||||| |||||||| |||||||||||||||| |||| || ||||||||||||    
T  28981238 tctttgaatatgaaccaaacgaacaccacaacaagatacaaaatcaaacaac 28981187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 606331 - 606286
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaat 63  Q
    |||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  606331 catgtttccggatctgcaacgttgatgtccaaatcattggttgaat 606286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 28981293 - 28981248
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||| ||||||||| | ||||||| |||||||||||||||||    
T  28981293 atctgcaatgttgacgtcaagatcattgattgaatctgtgattgac 28981248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 31296948 - 31296911
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcat 54  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  31296948 tcatgcttccggatctgcaacgttgacgtctaaatcat 31296911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 19164782 - 19164722
Alignment:
Q  86 ctgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaa 146  Q
    ||||||| |||||||||||||  | ||||||| |||||||| | ||||| |||||||||||    
T  19164782 ctgaagccggtctttcaatatagagcaaacgatcaccacaacatgacacaaaatcaaacaa 19164722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 30493659 - 30493603
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| || ||||||||||||||| ||||||||| |||||| || |||||||    
T  30493659 catgcttccggatttgcaacgttgacgtccaaatcattgattgaatatgagattgac 30493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 32327179 - 32327235
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||| ||||| ||||||||| |||||| ||| |||||    
T  32327179 tcatgcttccggatctgcaacgttaacgtcaaaatcattgcttgaatttgtaattga 32327235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 33053131 - 33053187
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||  ||||||||| |||||| ||| ||||||    
T  33053131 catgcttccggatctgcaacgttgacgttcaaatcattggttgaatttgtaattgac 33053187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 34222868 - 34222812
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaa 143  Q
    ||||| || ||||||| |||||| |||| ||| ||||||| ||||||||||||||||    
T  34222868 tgaagttgatctttcattatgaaccaaatgaaaaccacaacaagacacgaaatcaaa 34222812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 16262922 - 16262869
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  16262922 tttcaatatgaatcaaacgaacaccacaacaagacgcgaaatcaaacaacgccg 16262869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 47133033 - 47132911
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacg 116  Q
    ||||| ||||| |||||||| ||||||||| ||||||| | |||||||||||||||||            |||||||| |||||||||||||| ||||||    
T  47133033 tcatgcttccggatctgcaatgttgacgtccaaatcatcgattgaatctgtgattgac------------tgaagctgatctttcaatatgaagcaaacg 47132946  T
Q  117 aacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||| ||| ||||| |||||| |||||||||||    
T  47132945 aacaccgcaacaagacgcgaaattaaacaacgccg 47132911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 34519216 - 34519161
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||||||| |||||  |||||||||||||||||    
T  34519216 tctttcaatatgaatcaaatgaacaccacaagaagacgagaaatcaaacaacgccg 34519161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 24583068 - 24583023
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24583068 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 24583023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 44543390 - 44543345
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  44543390 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 44543345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 41994501 - 41994437
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    |||||| ||| ||||||||||||||  ||||||||||||||| ||||  ||||||||||||||||    
T  41994501 actgaaactgatctttcaatatgaacgaaacgaacaccacaacaagatccgaaatcaaacaacgc 41994437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 29184292 - 29184222
Alignment:
Q  78 gtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||| |||||||  || |||||||||||||||||||  ||||||| ||||||||  ||||||||||||||    
T  29184292 gtgattaactgaatatgatctttcaatatgaatcaaagaaacaccataataagacgtgaaatcaaacaacg 29184222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21947580 - 21947637
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  21947580 tcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 21947637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 49627031 - 49626986
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||    
T  49627031 atctgcaacgttgacgtccaaatcattgattgaatttgtgattgac 49626986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 9687201 - 9687256
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| ||||   |||||||||||||||||    
T  9687201 tctttcaatatgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacgccg 9687256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 24583024 - 24582959
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||| |||||||||||||| | |||||||||| ||| ||||  | ||||||||||||||||    
T  24583024 actgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgccg 24582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 25564129 - 25564071
Alignment:
Q  16 atcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||| ||||  |||||||| ||||||| | ||||||||| |||||||||||||||||    
T  25564129 atcatgcttccagatctgcaatgttgacgcccaaatcattgattgaatctgtgattgac 25564071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 36775673 - 36775727
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||| | |||||||||||||||| | ||||||||| |||||| ||||||||    
T  36775673 catgtttctggatctgcaacgttgacgcccaaatcattgattgaatttgtgattg 36775727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 39927551 - 39927605
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    |||||||||||||| |||| ||||||| ||| |||||  ||||||||||||||||    
T  39927551 tctttcaatatgaaacaaatgaacaccgcaacaagacgggaaatcaaacaacgcc 39927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 44543342 - 44543281
Alignment:
Q  89 aagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||| |||||||||||||| ||| |||||||| ||||||||  | ||||||||||||||||    
T  44543342 aagctgatctttcaatatgaaccaa-cgaacaccgcaataagatgccaaatcaaacaacgccg 44543281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 5701341 - 5701288
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  5701341 tttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 5701288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 13144839 - 13144888
Alignment:
Q  94 ggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaa 143  Q
    ||||||||||||||||||||| |||||| || | ||||| ||||||||||    
T  13144839 ggtctttcaatatgaatcaaatgaacactacgacaagacgcgaaatcaaa 13144888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 19715892 - 19715945
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||    
T  19715892 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgc 19715945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 50272139 - 50272192
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  50272139 tttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 50272192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 51916627 - 51916684
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||||||||||||||||||||   ||||||||| |||||| ||| ||||||    
T  51916627 tcatgcttccgtatctgcaacgttgacgctcaaatcattgattgaatttgtaattgac 51916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 5324557 - 5324605
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaa 146  Q
    ||||||||||||||||| ||||||| ||| |||||  ||||||||||||    
T  5324557 tttcaatatgaatcaaatgaacaccgcaaaaagacgggaaatcaaacaa 5324605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 14872768 - 14872712
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||| | ||||||||| |||||| ||| ||||||    
T  14872768 catgcttccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgac 14872712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 32395116 - 32395072
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  32395116 atctgcaacgttgacgtccaaatcattggttgaatttgtaattga 32395072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 35484365 - 35484409
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  35484365 atctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 35484409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 48750258 - 48750222
Alignment:
Q  86 ctgaagctggtctttcaatatgaatcaaacgaacacc 122  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  48750258 ctgaagctgatctttcaatacgaatcaaacgaacacc 48750222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 49504557 - 49504601
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttga 61  Q
    ||||| ||||| ||||||||||||||| || ||||||||||||||    
T  49504557 tcatgcttccggatctgcaacgttgacatccaaatcattgtttga 49504601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 52944457 - 52944336
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacga 117  Q
    |||| ||||| |||||||||||||||||| ||||||| | |||||||||||||||||            |||||||| |||||||||||||| |||||||    
T  52944457 catgcttccggatctgcaacgttgacgtccaaatcatcgattgaatctgtgattgac------------tgaagctgatctttcaatatgaaacaaacga 52944370  T
Q  118 acaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||| ||| ||||| | |||| |||||||||||    
T  52944369 acaccgcaacaagacgcaaaattaaacaacgccg 52944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 36204347 - 36204467
Alignment:
Q  23 ttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacgaacacc 122  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||||       ||||||  |||||||||| | |||||||||||| |||| |||||||    
T  36204347 ttccggatctgcaacgttgacgtccaaatcattgattgaatttgtga-------tgtgattgactgaagctgatttttcaatatgaaccaaatgaacacc 36204439  T
Q  123 acaataagacacgaaatcaaacaacgcc 150  Q
     ||| || |  |||||||||||||||||    
T  36204440 gcaacaatatgcgaaatcaaacaacgcc 36204467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 22038831 - 22038885
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    |||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  22038831 tctttcaatatgaaccaaacgagcaccacaacaagacgcgaaatcaaacaacgcc 22038885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 28857493 - 28857427
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||| |||||||||||||| |||||||||||| |||  |||| || |||||||||||||||    
T  28857493 actgaagctgatctttcaatatgaaacaaacgaacaccgcaactagacgcggaatcaaacaacgccg 28857427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 35964972 - 35965026
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||| ||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  35964972 tcttttaatatgaatcaaatgaacaccacaataagacgggaaatcaaacaacgcc 35965026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 18048974 - 18048909
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    |||||||||  ||||||||||||||||||||||||||| ||| ||| | | |||||||||||||||    
T  18048974 actgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 18048909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 47320386 - 47320431
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  47320386 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 47320431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 6155227 - 6155307
Alignment:
Q  68 gattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||| | ||||||  |||||| ||| ||||||||||||||||||||||||||  | | || ||||||||||||||||||    
T  6155227 gattgaacatgtgattgactgaaactgatctttcaatatgaatcaaacgaacactgcgacaaaacacgaaatcaaacaacg 6155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 868254 - 868199
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||||||    
T  868254 tctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaacgccg 868199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 10359544 - 10359595
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    ||||||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  10359544 tctttcaatatgaatcaaatgaacaccacaagaagacgggaaatcaaacaac 10359595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 24099030 - 24099085
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  24099030 catgtttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 24099085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 33332543 - 33332586
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  33332543 atctgcaacgttgacgtccaaatcattgattgaatctgtgattg 33332586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 4142714 - 4142771
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||||| | |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  4142714 tcatgtttctggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 4142771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 22611330 - 22611273
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  22611330 tcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 22611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 51888231 - 51888292
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||| || |||||||||||||| |||||||||||| ||| ||||  |||||||||||||||    
T  51888231 tgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagatgcgaaatcaaacaacg 51888292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 53811175 - 53811118
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  53811175 tcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 53811118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 4643950 - 4643895
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  4643950 tctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccg 4643895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 13634261 - 13634206
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||| |||||||||||||||||| ||||| ||| |||||| ||| |||||    
T  13634261 catgtttccggatctgcaacgttgacgtccaaatcgttgcttgaatttgtaattga 13634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 19853475 - 19853530
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  19853475 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattga 19853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 25273975 - 25273920
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  25273975 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 25273920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 29965727 - 29965672
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  29965727 tctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccg 29965672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 44947504 - 44947449
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||| ||||||| ||||||||||  |||||  |||||||||||||||||    
T  44947504 tctttcaatattaatcaaatgaacaccacacgaagacgggaaatcaaacaacgccg 44947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 47417754 - 47417699
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  47417754 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 47417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 50766509 - 50766564
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  50766509 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 50766564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 53616647 - 53616702
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  53616647 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 53616702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 7393351 - 7393301
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaa 146  Q
    |||||||||| |||||||||||||||||||| ||||   ||||||||||||    
T  7393351 tctttcaataggaatcaaacgaacaccacaacaagatgtgaaatcaaacaa 7393301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 9048763 - 9048689
Alignment:
Q  77 tgtgatcaactgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||| ||||||||||  |||||||| |  || |||||||||||| ||| ||||| |||||||| |||||||||    
T  9048763 tgtgattaactgaagcttatctttcaaaagaaaccaaacgaacaccgcaacaagacccgaaatcagacaacgccg 9048689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 9284003 - 9283949
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||||||||||||||||| ||||||| ||  |||||  ||||||||||||||||    
T  9284003 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgcc 9283949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 21686204 - 21686250
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaat 63  Q
    ||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  21686204 tcatgcttccggatctgcaacgttgacgtccaaatcattgcttgaat 21686250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 38166192 - 38166246
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgatt 71  Q
    |||||| |||| |||||||||||||| ||| ||||||||| |||||||| |||||    
T  38166192 tcatgtctccggatctgcaacgttgatgtccaaatcattgcttgaatctatgatt 38166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 43154011 - 43154065
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||||||||||||||||| ||||||| ||  |||||  ||||||||||||||||    
T  43154011 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgcc 43154065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 10389753 - 10389806
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||| ||||||| ||| |||||   ||||||||||||||||    
T  10389753 tttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaacaacgccg 10389806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 38166258 - 38166307
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    ||||||||||| |||||||| |||||||||||||||   |||||||||||    
T  38166258 tctttcaatataaatcaaacaaacaccacaataagatgtgaaatcaaaca 38166307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 48351204 - 48351265
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaa 146  Q
    |||||||||| ||||||||||| || ||||||||||||   | ||||| |||||||||||||    
T  48351204 actgaagctgatctttcaatataaaccaaacgaacaccgtgacaagacgcgaaatcaaacaa 48351265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 49410315 - 49410262
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||    
T  49410315 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgc 49410262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 37465563 - 37465511
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||| |||| ||||||||||||| || |||||  ||||||||||||||    
T  37465563 tctttcaatgtgaaccaaacgaacaccaaaagaagacgtgaaatcaaacaacg 37465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 46991129 - 46991181
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||||||||||||||| ||||||| ||| ||||   ||||||||||||||||    
T  46991129 tttcaatatgaatcaaatgaacaccgcaacaagatgggaaatcaaacaacgcc 46991181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 35175530 - 35175410
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacg 116  Q
    |||||||| || |||||||||||||| ||| ||||||||| |||||| ||||||||||            |||||||| ||||||||||| || ||||||    
T  35175530 tcatgttttcggatctgcaacgttgatgtccaaatcattgattgaatatgtgattgac------------tgaagctgatctttcaatataaaccaaacg 35175443  T
Q  117 aacaccacaataagacacgaaatcaaacaacgc 149  Q
    |||||| ||| |||||| |||||||||||||||    
T  35175442 aacaccgcaacaagacatgaaatcaaacaacgc 35175410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 29249303 - 29249239
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgc 149  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||  |||||||||| |||||    
T  29249303 actgaagctgatctttcaagatgaatcaaatgaacaccacaataagattcgaaatcaaagaacgc 29249239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 12947292 - 12947358
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||| || | |||||||||||| |||||||||||||||| ||||  ||||||||||||||||||    
T  12947292 actgaagttgatatttcaatatgaaccaaacgaacaccacaacaagatgcgaaatcaaacaacgccg 12947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 4396352 - 4396417
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    |||||||||  ||||||||||||||||||||||||||| ||| ||| | | |||||||||||||||    
T  4396352 actgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 4396417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 29922184 - 29922128
Alignment:
Q  16 atcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||    
T  29922184 atcatgtttctggatctgcaacgttgacgtccaaatcattgattgaatatgtgattg 29922128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 29971337 - 29971281
Alignment:
Q  16 atcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattg 72  Q
    |||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||    
T  29971337 atcatgtttctggatctgcaacgttgacgtccaaatcattgattgaatatgtgattg 29971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 50194297 - 50194390
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccgtgtgatcaactgaagctggtctttcaatatgaatcaaacg 116  Q
    ||||| ||||| |||||||||||| ||||| ||||||| | |||||||||||||||            ||||||||||||||||||||||||| ||||||    
T  50194297 tcatgcttccggatctgcaacgttaacgtccaaatcatcgattgaatctgtgattg------------actgaagctggtctttcaatatgaaacaaacg 50194384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 29239413 - 29239347
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||| |||| ||||| ||| |||||||||||||||| |||||  ||||||||||| |||||    
T  29239413 actgaagctgatcttccaatacgaaccaaacgaacaccacaacaagacgtgaaatcaaacagcgccg 29239347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 53807835 - 53807877
Alignment:
Q  32 tgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  53807835 tgcaacgttgacgtccaaatcattgattgaatctgtgattgac 53807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 4821873 - 4821816
Alignment:
Q  89 aagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaa 146  Q
    |||||| |||||||||||||| |||||||||||| ||| ||||| | |||||||||||    
T  4821873 aagctgatctttcaatatgaaccaaacgaacaccgcaacaagacgcaaaatcaaacaa 4821816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 48199845 - 48199788
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaac 144  Q
    ||||| || |||||||||| ||| |||||||||||||||| |||| ||||||||||||    
T  48199845 tgaagttgatctttcaataggaaccaaacgaacaccacaacaagatacgaaatcaaac 48199788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 52496995 - 52496934
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||| |||||||||| |||||||||||||||| ||| || ||  ||||||||||||||    
T  52496995 tgaagctgatctttcaataagaatcaaacgaacacctcaacaatacgtgaaatcaaacaacg 52496934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 14859604 - 14859560
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||    
T  14859604 atctgcaacgttgacgtccaaatcattgattgaatatgtgattga 14859560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 52923080 - 52923136
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  52923080 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 52923136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 12050610 - 12050669
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgaccg 76  Q
    ||||||||||| |||||||||||||||  | ||||||||| |||||| ||| ||||||||    
T  12050610 tcatgtttccggatctgcaacgttgacacccaaatcattggttgaatttgtaattgaccg 12050669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 12116175 - 12116120
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  12116175 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 12116120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 31794148 - 31794093
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||| |  ||||||||||||||||    
T  31794148 tctttcaatatgaatcaaatgaacaccgcaacaagatagaaaatcaaacaacgccg 31794093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 35499195 - 35499250
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  35499195 tctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccg 35499250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 36734689 - 36734744
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||| ||||||||||| ||||||| |||||||||   ||||||||||||||||    
T  36734689 tctttcattatgaatcaaatgaacaccgcaataagacggaaaatcaaacaacgccg 36734744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 36906199 - 36906144
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| |||||| |||  |||||  |||||||||||||||||    
T  36906199 tctttcaatatgaatcaaatgaacactacacgaagacgggaaatcaaacaacgccg 36906144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 45568408 - 45568463
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||| ||||| |||||||| ||||||||| |||||||||||||||| ||| |||||    
T  45568408 catgcttccggatctgcaaagttgacgtccaaatcattgtttgaatttgtaattga 45568463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 46934719 - 46934668
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||    
T  46934719 tctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaac 46934668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 32607546 - 32607492
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgcc 150  Q
    ||||||||||||||||||| ||||||| ||  |||||  ||||||||||||||||    
T  32607546 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgcc 32607492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 628897 - 628942
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||||||| ||| ||||||||| |||||||||||||||||    
T  628897 atctacaacgttgatgtccaaatcattgattgaatctgtgattgac 628942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 7448876 - 7448933
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| || ||||||||||||||| ||||||||| |||||| ||| ||||||    
T  7448876 tcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttgtaattgac 7448933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 7457018 - 7457075
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| || ||||||||||||||| ||||||||| |||||| ||| ||||||    
T  7457018 tcatgcttccggatatgcaacgttgacgtccaaatcattggttgaatttgtaattgac 7457075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 10233196 - 10233139
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||||| | ||||||||||||  |||||||||||||| |||||| ||| ||||||    
T  10233196 tcatgtttctggatctgcaacgttatcgtctaaatcattggttgaatttgtaattgac 10233139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 21488166 - 21488113
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||||  |||||| ||| |||||  |||||||||||||||||    
T  21488166 tttcaatatgaatcaaataaacaccgcaagaagacgggaaatcaaacaacgccg 21488113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 23799872 - 23799929
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||| || |||||||||||||||| | ||||||||| |||||| ||| ||||||    
T  23799872 tcatgttttcggatctgcaacgttgacgccgaaatcattgattgaatttgtaattgac 23799929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 42460875 - 42460822
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgat 70  Q
    ||||| ||| |||||||||||||||||| | ||||||||| |||||| ||||||    
T  42460875 tcatgcttctgtatctgcaacgttgacgcccaaatcattgattgaatttgtgat 42460822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 21431738 - 21431682
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||| ||| |||||| ||| ||||||    
T  21431738 catgcttccggatctgcaacgttgacgtccaaatcgttggttgaatttgtaattgac 21431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 29239468 - 29239412
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||| || |||| |||||| |||||| ||||||||| || ||||||||||||||    
T  29239468 catgttttcggatctacaacgtcgacgtccaaatcattgattaaatctgtgattgac 29239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 46304483 - 46304539
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||| ||||||| ||||||||||| |||||| ||| ||||||    
T  46304483 catgcttccggatctgcaatgttgacgcctaaatcattggttgaatttgtaattgac 46304539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 93167 - 93111
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaa-atcaaacaacgccg 151  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  93167 tctttcaatatgaaccaaacgaacaccacaacaagacacgaatatcaaacaacgccg 93111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 34773791 - 34773736
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||    
T  34773791 tctttcaatatgaatcaaatgaacaccgcaagaagacaggaaatcaaacaacgccg 34773736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 29617729 - 29617785
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccgt 152  Q
    |||||||||| ||||||||| ||||| |||| ||||| |||||||||||||||||||    
T  29617729 tctttcaatacgaatcaaacaaacactacaacaagacgcgaaatcaaacaacgccgt 29617785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 1448827 - 1448882
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||||||    
T  1448827 tctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccg 1448882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 23786655 - 23786600
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||||||    
T  23786655 tctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccg 23786600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 969478 - 969531
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||| ||||| |||||| ||||||||| | ||||||||||||||||    
T  969478 tttcaatatgaaccaaacaaacaccgcaataagacgcaaaatcaaacaacgccg 969531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 46822712 - 46822757
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||    
T  46822712 atctgcaacgttgacgtctaaatcattgattgaacatgtgattgac 46822757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 8001508 - 8001564
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  8001508 tcatgattccgaatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 8001564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 12141271 - 12141327
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  12141271 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 12141327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 19296998 - 19296942
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  19296998 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 19296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 31482115 - 31482175
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    |||||||| | ||||||||  ||||||||||||||| |||||||||  |||||||||||||    
T  31482115 tgaagctgttttttcaatagaaatcaaacgaacaccgcaataagacgtgaaatcaaacaac 31482175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 41553463 - 41553515
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  41553463 tctttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacg 41553515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 41553808 - 41553860
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  41553808 tctttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacg 41553860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9450100 - 9450155
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  9450100 catgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 9450155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 24069415 - 24069478
Alignment:
Q  88 gaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||| | ||||||||||||||||||||||||| ||| || || | |||||||| |||||||    
T  24069415 gaagctgatatttcaatatgaatcaaacgaacaccgcaacaatacgccaaatcaaaaaacgccg 24069478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 32521924 - 32521979
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||||||| || ||   ||||||||||||||||    
T  32521924 tctttcaatatgaatcaaatgaacaccacaacaaaacggaaaatcaaacaacgccg 32521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 39171553 - 39171608
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  39171553 catgcttccggatctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 39171608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 41553398 - 41553453
Alignment:
Q  19 atgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||||||| |||||||||||||||||| ||||||||   ||||| ||||||||||    
T  41553398 atgtttccggatctgcaacgttgacgtccaaatcattaactgaatatgtgattgac 41553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 41554155 - 41554205
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  41554155 tttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacg 41554205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 1769152 - 1769197
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||| ||||  ||||||||| |||||||||||||||||    
T  1769152 atctgcaacgttcacgttcaaatcattgattgaatctgtgattgac 1769197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 32684746 - 32684693
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  32684746 tttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccg 32684693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 2843238 - 2843290
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||| ||  |||||  ||||||||||||||    
T  2843238 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacg 2843290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 3267241 - 3267289
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaac 144  Q
    ||||||||||||||| |||||||||||   ||||||| |||||||||||    
T  3267241 tctttcaatatgaattaaacgaacaccgtgataagacgcgaaatcaaac 3267289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 20116662 - 20116610
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 148  Q
    ||||||||||||||||||| ||||||| ||| |||||   |||||||||||||    
T  20116662 tctttcaatatgaatcaaatgaacaccgcaagaagacggtaaatcaaacaacg 20116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 22087390 - 22087330
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    ||||||| || |||||||||| | ||||||| |||||  ||| ||||||||||||||||||    
T  22087390 actgaagttgatctttcaataggtatcaaacaaacacagcaacaagacacgaaatcaaaca 22087330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 24069356 - 24069412
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    ||||| |||||  ||||||||||||||||  ||||||||| ||||| ||||||||||    
T  24069356 tcatgcttccgggtctgcaacgttgacgttcaaatcattgattgaacctgtgattga 24069412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 34899570 - 34899626
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| || ||||||||||||||| ||||||||| |||||| ||| ||||||    
T  34899570 catgcttccgaatttgcaacgttgacgtccaaatcattggttgaatttgtaattgac 34899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 37837421 - 37837477
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||| | ||||||||| |||||| ||| ||||||    
T  37837421 catgcttccggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgac 37837477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 38880596 - 38880656
Alignment:
Q  85 actgaagctggtctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaaca 145  Q
    |||||||||| |||||||||| ||| |||||||||||| ||| ||||  | ||||||||||    
T  38880596 actgaagctgatctttcaataagaaccaaacgaacaccgcaacaagatgcaaaatcaaaca 38880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 42067061 - 42067113
Alignment:
Q  99 ttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||| ||||||| ||| |||||  ||||||||||| |||||    
T  42067061 ttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacagcgccg 42067113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 41184437 - 41184492
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||||||||||||||  |||||  |||||||||||||||||    
T  41184437 tctttcaatatgaatcaaacgaacaccacacgaagacgggaaatcaaacaacgccg 41184492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 8088186 - 8088231
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  8088186 atctgcaacgttgacgtccaaatcattgattgaatctgtgattgac 8088231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 35920951 - 35921014
Alignment:
Q  11 agaatatc-atgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||| ||| ||||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  35920951 agaatatcgatgcttccggatctgcaacgttgacgttcaaatcattgattgaatctgtgattga 35921014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 13007354 - 13007298
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  13007354 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 13007298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 31315976 - 31315932
Alignment:
Q  87 tgaagctggtctttcaatatgaatcaaacgaacaccacaataaga 131  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||    
T  31315976 tgaagctgatctttcaatatgaatcaaacaaacaccacaacaaga 31315932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 34945518 - 34945462
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  34945518 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 34945462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 38597922 - 38597866
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  38597922 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 38597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 2057835 - 2057890
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  2057835 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 2057890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 7613055 - 7613106
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||||    
T  7613055 tctttcaatatgaatcaaatgaacaccgcaacaagacgagaaatcaaacaac 7613106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 9113693 - 9113744
Alignment:
Q  23 ttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  9113693 ttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 9113744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 10332577 - 10332632
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||||||| |||||  ||| ||||| ||||||||||||| ||||    
T  10332577 tctttcaatatgaatcaaacaaacactgcaacaagacgcgaaatcaaacaatgccg 10332632  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 34881800 - 34881745
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    ||||||||||||||||||| ||||||| ||  |||||  |||||||||||||||||    
T  34881800 tctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccg 34881745  T

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Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 92525 - 92576
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaac 147  Q
    |||||||||||||| |||||||||||||||| |||||  |||||||||||||    
T  92525 tctttcaatatgaaccaaacgaacaccacaacaagacgtgaaatcaaacaac 92576  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 92470 - 92512
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgatt 71  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||    
T  92470 atctacaacgttgacgtccaaatcattgattgaatctgtgatt 92512  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 58050 - 58107
Alignment:
Q  17 tcatgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    ||||| ||||| |||||||| ||||||||| ||||||| | |||||||||||||||||    
T  58050 tcatgcttccggatctgcaatgttgacgtccaaatcatcgattgaatctgtgattgac 58107  T

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Target: scaffold0426 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 6385 - 6329
Alignment:
Q  96 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccgt 152  Q
    ||||||||||||||||||| ||||||| ||| |||||  |||||||||||| |||||    
T  6385 tctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaatgccgt 6329  T

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Target: scaffold0088 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 50902 - 50846
Alignment:
Q  18 catgtttccgtatctgcaacgttgacgtctaaatcattgtttgaatctgtgattgac 74  Q
    |||| ||||| |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  50902 catgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 50846  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 201372 - 201424
Alignment:
Q  99 ttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||||||| ||||||||||| |||||  ||||||||||| |||||    
T  201372 ttcaatatgaatcaaatgaacaccacaagaagacgtgaaatcaaacagcgccg 201424  T

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Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 6088 - 6035
Alignment:
Q  98 tttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacgccg 151  Q
    |||||||||||| |||| ||||||| ||| || || ||||||||||||||||||    
T  6088 tttcaatatgaaccaaatgaacaccgcaacaatacgcgaaatcaaacaacgccg 6035  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 32721 - 32765
Alignment:
Q  29 atctgcaacgttgacgtctaaatcattgtttgaatctgtgattga 73  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||    
T  32721 atctgcaacgttgacgtccaaatcattgcttgaatttgtaattga 32765  T

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