View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20076_high_61 (Length: 262)
Name: NF20076_high_61
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20076_high_61 |
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Alignment Details
Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 44825441 - 44825689
Alignment:
| Q |
1 |
ttataagaagaacaataaaactatatcccctttatcagtggtatgtaaaatataaaaaccattgtataacaacgaatgtatttgaaaattatacatgttt |
100 |
Q |
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| T |
44825441 |
ttataagaagaacaataaaactatatcccctttatcagtggtatgtaaaatataaaaaccattgtataacaacgaatgtatttgaaaattatacatgttt |
44825540 |
T |
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| Q |
101 |
tgcggctaaattaggatttgaannnnnnnctatccagttttaataagannnnnnnaatctataataaaataaaaagacacgtttagg-nnnnnnnnngaa |
199 |
Q |
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| T |
44825541 |
tgcggctaaattaggatttgaatttttttctatccaattttaataagatttttttaatctataataaaataaaaagacacgtttaggaagaaaaaaaaaa |
44825640 |
T |
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| Q |
200 |
gttaaatcctagtgaaagaaacacccatgacatcgccttagaagaactt |
248 |
Q |
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| T |
44825641 |
gttaaatcctagtgaaagaaacacccatgacatcgccttagaagaactt |
44825689 |
T |
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