View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20076_low_50 (Length: 313)
Name: NF20076_low_50
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20076_low_50 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 7 - 280
Target Start/End: Complemental strand, 31195269 - 31194996
Alignment:
| Q |
7 |
tccaagaatattcaaccccaaattcgatggatactagctaacacttcatttaccaacaaaatgtgtcttttgttaatcggtttagcccataaaatcacta |
106 |
Q |
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| T |
31195269 |
tccaacaaaattcaaccccaaattcgatggatactagctaacacttcatttaccaacagaatgtgtcttttgttaatcggtttagcccataaaatcacta |
31195170 |
T |
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| Q |
107 |
atgaacgatatacatttaatgattttttgtaattttaatacacaaactatagtgacaacgtcacacacttttagcgatgaaaatgataatttaatctact |
206 |
Q |
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| T |
31195169 |
atgaacgatatacatttaatgattttttgtaattttaatacacaaactatagtgacaacgtcacacacttttagcgatgaaaatgataatttaatctact |
31195070 |
T |
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| Q |
207 |
ttttacgtattgattacaattgttaaaactactatgatctactttttatatcattacttgaaagtgacacaccc |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31195069 |
ttttacgtattgattacaattgttaaaactactatgatctactttttatatcattacttgaaagtgacacaccc |
31194996 |
T |
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