View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20076_low_54 (Length: 297)
Name: NF20076_low_54
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20076_low_54 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 35592554 - 35592834
Alignment:
| Q |
1 |
tataagttctcttcctttccctccaccaattttgaactacagaaaatttaattgttaaatcttcaaaagggtggtaaagggtgtccacattttgcttact |
100 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
35592554 |
tataagttctcttcctttccctccaccaatttttaactacagaaaatttaattgttaaatcttcaaaagggtggtaaagtgtgtccacattttgcttact |
35592653 |
T |
|
| Q |
101 |
aaataaattgtttaaatcagttcgataaagaaagatctttgggggctggtacgacacataataactcattaacgatgtggattgtggaaggaatatattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35592654 |
aaataaattgtttaaatcagttcgataaagaaagatctatgggggctggtacgacacataataactcattaacgatgtggattgtggaaggaatatattg |
35592753 |
T |
|
| Q |
201 |
gtgcgatagtgaactggcaaagagtaagaaccttgcatggtatatactttgtgcctattttatgtggattcattaccacat |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35592754 |
gtgcgatagtgaactggcaaagagtaagaaccttgcatggtatatactttgtgcctattttatgtggattcattaccacat |
35592834 |
T |
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