View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20076_low_61 (Length: 275)

Name: NF20076_low_61
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20076_low_61
NF20076_low_61
[»] chr1 (16 HSPs)
chr1 (61-256)||(28257802-28258001)
chr1 (6-37)||(4968622-4968653)
chr1 (6-37)||(25532996-25533027)
chr1 (6-37)||(34521197-34521228)
chr1 (6-37)||(38448873-38448904)
chr1 (6-37)||(40613046-40613077)
chr1 (6-37)||(41973278-41973309)
chr1 (6-37)||(45481516-45481547)
chr1 (6-40)||(127097-127131)
chr1 (7-37)||(12268991-12269021)
chr1 (6-35)||(3509950-3509979)
chr1 (1-38)||(28257731-28257768)
chr1 (5-37)||(23397330-23397362)
chr1 (9-37)||(34595898-34595926)
chr1 (6-38)||(47961295-47961327)
chr1 (6-38)||(52441517-52441549)
[»] chr8 (15 HSPs)
chr8 (6-40)||(444436-444470)
chr8 (6-40)||(22948085-22948119)
chr8 (6-38)||(11052999-11053031)
chr8 (6-38)||(15438476-15438508)
chr8 (6-38)||(15529780-15529812)
chr8 (6-37)||(12748924-12748955)
chr8 (6-37)||(19778088-19778119)
chr8 (6-37)||(32051539-32051570)
chr8 (7-37)||(33105415-33105445)
chr8 (7-40)||(29924921-29924954)
chr8 (6-34)||(7968950-7968978)
chr8 (6-38)||(23852934-23852966)
chr8 (6-38)||(28962700-28962732)
chr8 (5-37)||(39076542-39076574)
chr8 (5-37)||(39077028-39077060)
[»] chr7 (13 HSPs)
chr7 (6-40)||(48629069-48629103)
chr7 (6-37)||(2618702-2618733)
chr7 (6-37)||(10244750-10244781)
chr7 (6-37)||(18714471-18714502)
chr7 (6-37)||(19599168-19599199)
chr7 (6-37)||(19626532-19626563)
chr7 (6-37)||(20085766-20085797)
chr7 (6-37)||(27462443-27462474)
chr7 (6-37)||(46737808-46737839)
chr7 (6-37)||(46987109-46987140)
chr7 (7-37)||(7670458-7670488)
chr7 (7-37)||(39280825-39280855)
chr7 (6-38)||(30463377-30463409)
[»] chr5 (14 HSPs)
chr5 (6-40)||(33928662-33928696)
chr5 (7-40)||(18589871-18589904)
chr5 (6-37)||(6624799-6624830)
chr5 (6-37)||(22522808-22522839)
chr5 (6-37)||(32200454-32200485)
chr5 (6-37)||(37932353-37932384)
chr5 (6-37)||(40715956-40715987)
chr5 (7-37)||(32339759-32339789)
chr5 (7-37)||(42473918-42473948)
chr5 (9-37)||(21139155-21139183)
chr5 (6-38)||(26590730-26590762)
chr5 (6-34)||(35412980-35413008)
chr5 (6-34)||(39914924-39914952)
chr5 (2-30)||(42707994-42708022)
[»] chr3 (19 HSPs)
chr3 (5-37)||(48849770-48849802)
chr3 (6-37)||(25727974-25728005)
chr3 (6-37)||(28266739-28266770)
chr3 (6-37)||(34899120-34899151)
chr3 (6-37)||(38130966-38130997)
chr3 (6-37)||(40575616-40575647)
chr3 (6-37)||(41817522-41817553)
chr3 (6-37)||(45431971-45432002)
chr3 (6-37)||(48656906-48656937)
chr3 (6-40)||(2153505-2153539)
chr3 (6-40)||(3755362-3755396)
chr3 (8-37)||(913607-913636)
chr3 (4-33)||(42398000-42398029)
chr3 (6-35)||(48511273-48511302)
chr3 (5-37)||(8747243-8747275)
chr3 (9-37)||(16663243-16663271)
chr3 (6-38)||(28130940-28130972)
chr3 (6-34)||(46226087-46226115)
chr3 (9-37)||(48315031-48315059)
[»] scaffold0038 (1 HSPs)
scaffold0038 (6-37)||(31929-31960)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-37)||(75348-75379)
[»] chr6 (11 HSPs)
chr6 (6-37)||(655756-655787)
chr6 (6-37)||(2726424-2726455)
chr6 (6-37)||(4450285-4450316)
chr6 (6-37)||(8569732-8569763)
chr6 (6-37)||(28231432-28231463)
chr6 (6-37)||(33824904-33824935)
chr6 (7-37)||(9111071-9111101)
chr6 (6-40)||(9333754-9333788)
chr6 (7-37)||(12215777-12215807)
chr6 (6-34)||(18256906-18256934)
chr6 (6-38)||(26400887-26400919)
[»] chr4 (22 HSPs)
chr4 (6-37)||(675941-675972)
chr4 (6-37)||(7230303-7230334)
chr4 (6-37)||(11949770-11949801)
chr4 (6-37)||(17423184-17423215)
chr4 (6-37)||(20383511-20383542)
chr4 (6-37)||(20799401-20799432)
chr4 (6-37)||(25783456-25783487)
chr4 (6-37)||(34834013-34834044)
chr4 (6-37)||(42845048-42845079)
chr4 (6-37)||(46676505-46676536)
chr4 (6-37)||(49041988-49042019)
chr4 (6-37)||(49473668-49473699)
chr4 (6-37)||(49953410-49953441)
chr4 (7-37)||(3936651-3936681)
chr4 (7-37)||(19479484-19479514)
chr4 (5-34)||(50906095-50906124)
chr4 (6-38)||(11144671-11144703)
chr4 (6-34)||(16304108-16304136)
chr4 (9-37)||(24664998-24665026)
chr4 (6-34)||(37921769-37921797)
chr4 (9-37)||(44815967-44815995)
chr4 (9-37)||(54294429-54294457)
[»] chr2 (21 HSPs)
chr2 (6-37)||(8091165-8091196)
chr2 (6-37)||(12124568-12124599)
chr2 (6-37)||(20455914-20455945)
chr2 (6-37)||(20565082-20565113)
chr2 (6-37)||(24593399-24593430)
chr2 (6-37)||(25186249-25186280)
chr2 (6-37)||(29544650-29544681)
chr2 (6-37)||(31815894-31815925)
chr2 (6-37)||(36359337-36359368)
chr2 (6-37)||(42791318-42791349)
chr2 (6-40)||(833073-833107)
chr2 (6-40)||(4122017-4122051)
chr2 (6-40)||(7206148-7206182)
chr2 (6-40)||(34977227-34977261)
chr2 (6-40)||(35287668-35287702)
chr2 (6-38)||(16204823-16204855)
chr2 (6-34)||(25612303-25612331)
chr2 (9-37)||(27848184-27848212)
chr2 (9-37)||(31543038-31543066)
chr2 (6-38)||(39068714-39068746)
chr2 (6-38)||(42066735-42066767)
[»] scaffold1127 (1 HSPs)
scaffold1127 (7-37)||(1172-1202)
[»] scaffold1619 (1 HSPs)
scaffold1619 (6-34)||(1054-1082)
[»] scaffold0118 (1 HSPs)
scaffold0118 (6-38)||(45435-45467)
[»] scaffold0025 (1 HSPs)
scaffold0025 (6-34)||(64241-64269)


Alignment Details
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 61 - 256
Target Start/End: Original strand, 28257802 - 28258001
Alignment:
Q  61 gatattaaataaacaatggttaatgttcaatgttgaatctataca--tttggttaacatttttaaaaata--agattgaatattaagccatgctctgcat 156  Q
    ||||||||| ||||||||| | |||||||||||||||||| ||||  |||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  28257802 gatattaaaaaaacaatggctgatgttcaatgttgaatctgtacacatttgcttaacatttttaaaaatataagattgaatattaagccatgctctgcat 28257901  T
Q  157 acatctattcgatttttcattcataataannnnnnnnaaagttattccatggtaaagtaccaaaatgtccatgtgagcatatagttggtagggatgtctg 256  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28257902 acatctattcgatttttcattcataataatttttttaaaagttattccatggtaaagtaccaaaatgtccgtgtgagcatatagttggtagggatgtctg 28258001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 4968653 - 4968622
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  4968653 gacaatgcataatatatgcaaggtccggggtt 4968622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 25532996 - 25533027
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  25532996 gacaatgcataatatatgcaaggtccggggtt 25533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 34521228 - 34521197
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  34521228 gacaatgcataatatatgcaaggtccggggtt 34521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 38448904 - 38448873
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  38448904 gacaatgcataatatatgcaaggtccggggtt 38448873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 40613046 - 40613077
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  40613046 gacaatgcataatatatgcaaggtccggggtt 40613077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 41973278 - 41973309
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  41973278 gacaatgcataatatatgcaaggtccggggtt 41973309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 45481516 - 45481547
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  45481516 gacaatgcataatatatgcaaggtccggggtt 45481547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 127097 - 127131
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||| ||||||||||||||||||||||||    
T  127097 gacaatgcattatatatgcaaggtccggggtttaa 127131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 12269021 - 12268991
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  12269021 acaatgcataatatatgcaaggtccggggtt 12268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 3509979 - 3509950
Alignment:
Q  6 gacaatgcataatatatgcaaggtccgggg 35  Q
    ||||||||||||||||||||||||||||||    
T  3509979 gacaatgcataatatatgcaaggtccgggg 3509950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28257731 - 28257768
Alignment:
Q  1 tgtttgacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  28257731 tgtttgacaatgcataatatatgtaaggttcggggttt 28257768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 23397362 - 23397330
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||| |||||||||||||||||||    
T  23397362 tgacaatgcataacatatgcaaggtccggggtt 23397330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 34595898 - 34595926
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  34595898 aatgcataatatatgcaaggtccggggtt 34595926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 47961327 - 47961295
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||||| |||||    
T  47961327 gacaatgcataatatatgcaaggtccgaggttt 47961295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 52441549 - 52441517
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||||||| ||||    
T  52441549 gacaatgcataatatatgcaaggtccggcgttt 52441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 444436 - 444470
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||||||||||||    
T  444436 gacaatgcataatatatgcaaggtccggggtttaa 444470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 22948119 - 22948085
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||||||||||||    
T  22948119 gacaatgcataatatatgcaaggtccggggtttaa 22948085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 11052999 - 11053031
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||||||||||||    
T  11052999 gacaatgcataatatatgcaaggtccggggttt 11053031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 15438476 - 15438508
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||||||||||||    
T  15438476 gacaatgcataatatatgcaaggtccggggttt 15438508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 15529780 - 15529812
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||||||||||||    
T  15529780 gacaatgcataatatatgcaaggtccggggttt 15529812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 12748924 - 12748955
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  12748924 gacaatgcataatatatgcaaggtccggggtt 12748955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 19778088 - 19778119
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  19778088 gacaatgcataatatatgcaaggtccggggtt 19778119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 32051570 - 32051539
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  32051570 gacaatgcataatatatgcaaggtccggggtt 32051539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 33105415 - 33105445
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  33105415 acaatgcataatatatgcaaggtccggggtt 33105445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29924954 - 29924921
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||| ||||||||||    
T  29924954 acaatgcataatatatgcaaggttcggggtttaa 29924921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 7968978 - 7968950
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  7968978 gacaatgcataatatatgcaaggtccggg 7968950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 23852934 - 23852966
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||||| |||||    
T  23852934 gacaatgcataatatatgcaaggtccgtggttt 23852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 28962732 - 28962700
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||| ||||||||    
T  28962732 gacaatgcataatatatgcaaggtacggggttt 28962700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 39076542 - 39076574
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||| |||||||||||||||||||    
T  39076542 tgacaatgcataaaatatgcaaggtccggggtt 39076574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 39077028 - 39077060
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||| |||||||||||||||||||    
T  39077028 tgacaatgcataaaatatgcaaggtccggggtt 39077060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 48629103 - 48629069
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||||||||||||    
T  48629103 gacaatgcataatatatgcaaggtccggggtttaa 48629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 2618702 - 2618733
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  2618702 gacaatgcataatatatgcaaggtccggggtt 2618733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 10244750 - 10244781
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  10244750 gacaatgcataatatatgcaaggtccggggtt 10244781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 18714471 - 18714502
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  18714471 gacaatgcataatatatgcaaggtccggggtt 18714502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 19599168 - 19599199
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  19599168 gacaatgcataatatatgcaaggtccggggtt 19599199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 19626563 - 19626532
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  19626563 gacaatgcataatatatgcaaggtccggggtt 19626532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 20085797 - 20085766
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  20085797 gacaatgcataatatatgcaaggtccggggtt 20085766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 27462474 - 27462443
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  27462474 gacaatgcataatatatgcaaggtccggggtt 27462443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 46737808 - 46737839
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  46737808 gacaatgcataatatatgcaaggtccggggtt 46737839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 46987109 - 46987140
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  46987109 gacaatgcataatatatgcaaggtccggggtt 46987140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 7670458 - 7670488
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  7670458 acaatgcataatatatgcaaggtccggggtt 7670488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 39280855 - 39280825
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  39280855 acaatgcataatatatgcaaggtccggggtt 39280825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 30463409 - 30463377
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||||| ||||||||    
T  30463409 gacaatgcataatatatgcaaggttcggggttt 30463377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 33928662 - 33928696
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||||||||||||    
T  33928662 gacaatgcataatatatgcaaggtccggggtttaa 33928696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 18589904 - 18589871
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||||||||||||||    
T  18589904 acaatgcataatatatgcaaggtccggggtttaa 18589871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 6624799 - 6624830
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  6624799 gacaatgcataatatatgcaaggtccggggtt 6624830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 22522839 - 22522808
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  22522839 gacaatgcataatatatgcaaggtccggggtt 22522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 32200485 - 32200454
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  32200485 gacaatgcataatatatgcaaggtccggggtt 32200454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 37932353 - 37932384
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  37932353 gacaatgcataatatatgcaaggtccggggtt 37932384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 40715987 - 40715956
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  40715987 gacaatgcataatatatgcaaggtccggggtt 40715956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 32339759 - 32339789
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  32339759 acaatgcataatatatgcaaggtccggggtt 32339789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 42473918 - 42473948
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  42473918 acaatgcataatatatgcaaggtccggggtt 42473948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 21139183 - 21139155
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  21139183 aatgcataatatatgcaaggtccggggtt 21139155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 26590730 - 26590762
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||| |||||||    
T  26590730 gacaatgcataatatatgcaaggtctggggttt 26590762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 35412980 - 35413008
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  35412980 gacaatgcataatatatgcaaggtccggg 35413008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 39914924 - 39914952
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  39914924 gacaatgcataatatatgcaaggtccggg 39914952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 42707994 - 42708022
Alignment:
Q  2 gtttgacaatgcataatatatgcaaggtc 30  Q
    |||||||||||||||||||||||||||||    
T  42707994 gtttgacaatgcataatatatgcaaggtc 42708022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 48849802 - 48849770
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||||    
T  48849802 tgacaatgcataatatatgcaaggtccggggtt 48849770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 25728005 - 25727974
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  25728005 gacaatgcataatatatgcaaggtccggggtt 25727974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 28266739 - 28266770
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  28266739 gacaatgcataatatatgcaaggtccggggtt 28266770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 34899120 - 34899151
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  34899120 gacaatgcataatatatgcaaggtccggggtt 34899151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 38130997 - 38130966
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  38130997 gacaatgcataatatatgcaaggtccggggtt 38130966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 40575647 - 40575616
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  40575647 gacaatgcataatatatgcaaggtccggggtt 40575616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 41817522 - 41817553
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  41817522 gacaatgcataatatatgcaaggtccggggtt 41817553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 45431971 - 45432002
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  45431971 gacaatgcataatatatgcaaggtccggggtt 45432002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 48656937 - 48656906
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  48656937 gacaatgcataatatatgcaaggtccggggtt 48656906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 2153539 - 2153505
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||||| |||||||||    
T  2153539 gacaatgcataatatatgcaaggtctggggtttaa 2153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 3755362 - 3755396
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  3755362 gacaatgcataatatatgcaaggtccagggtttaa 3755396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 913636 - 913607
Alignment:
Q  8 caatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||    
T  913636 caatgcataatatatgcaaggtccggggtt 913607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 42398029 - 42398000
Alignment:
Q  4 ttgacaatgcataatatatgcaaggtccgg 33  Q
    ||||||||||||||||||||||||||||||    
T  42398029 ttgacaatgcataatatatgcaaggtccgg 42398000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 48511273 - 48511302
Alignment:
Q  6 gacaatgcataatatatgcaaggtccgggg 35  Q
    ||||||||||||||||||||||||||||||    
T  48511273 gacaatgcataatatatgcaaggtccgggg 48511302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 8747275 - 8747243
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||| |||||||||||||    
T  8747275 tgacaatgcataatatatgtaaggtccggggtt 8747243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 16663271 - 16663243
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  16663271 aatgcataatatatgcaaggtccggggtt 16663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 28130972 - 28130940
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||| |||||||    
T  28130972 gacaatgcataatatatgcaaggtctggggttt 28130940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 46226115 - 46226087
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  46226115 gacaatgcataatatatgcaaggtccggg 46226087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 48315059 - 48315031
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  48315059 aatgcataatatatgcaaggtccggggtt 48315031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 31960 - 31929
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  31960 gacaatgcataatatatgcaaggtccggggtt 31929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 75348 - 75379
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  75348 gacaatgcataatatatgcaaggtccggggtt 75379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 655787 - 655756
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  655787 gacaatgcataatatatgcaaggtccggggtt 655756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 2726455 - 2726424
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  2726455 gacaatgcataatatatgcaaggtccggggtt 2726424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 4450285 - 4450316
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  4450285 gacaatgcataatatatgcaaggtccggggtt 4450316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 8569732 - 8569763
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  8569732 gacaatgcataatatatgcaaggtccggggtt 8569763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 28231463 - 28231432
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  28231463 gacaatgcataatatatgcaaggtccggggtt 28231432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 33824904 - 33824935
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  33824904 gacaatgcataatatatgcaaggtccggggtt 33824935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 9111071 - 9111101
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  9111071 acaatgcataatatatgcaaggtccggggtt 9111101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 9333754 - 9333788
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||| ||||||||||||||||||||||||    
T  9333754 gacaatgcattatatatgcaaggtccggggtttaa 9333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 12215777 - 12215807
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  12215777 acaatgcataatatatgcaaggtccggggtt 12215807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 18256906 - 18256934
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  18256906 gacaatgcataatatatgcaaggtccggg 18256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 26400887 - 26400919
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||| ||||||||||||||||||||||||||    
T  26400887 gacaatacataatatatgcaaggtccggggttt 26400919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 675941 - 675972
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  675941 gacaatgcataatatatgcaaggtccggggtt 675972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 7230303 - 7230334
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  7230303 gacaatgcataatatatgcaaggtccggggtt 7230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 11949801 - 11949770
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  11949801 gacaatgcataatatatgcaaggtccggggtt 11949770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 17423215 - 17423184
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  17423215 gacaatgcataatatatgcaaggtccggggtt 17423184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 20383511 - 20383542
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  20383511 gacaatgcataatatatgcaaggtccggggtt 20383542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 20799432 - 20799401
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  20799432 gacaatgcataatatatgcaaggtccggggtt 20799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 25783487 - 25783456
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  25783487 gacaatgcataatatatgcaaggtccggggtt 25783456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 34834044 - 34834013
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  34834044 gacaatgcataatatatgcaaggtccggggtt 34834013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 42845048 - 42845079
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  42845048 gacaatgcataatatatgcaaggtccggggtt 42845079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 46676536 - 46676505
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  46676536 gacaatgcataatatatgcaaggtccggggtt 46676505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 49042019 - 49041988
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  49042019 gacaatgcataatatatgcaaggtccggggtt 49041988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 49473668 - 49473699
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  49473668 gacaatgcataatatatgcaaggtccggggtt 49473699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 49953441 - 49953410
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  49953441 gacaatgcataatatatgcaaggtccggggtt 49953410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 3936651 - 3936681
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  3936651 acaatgcataatatatgcaaggtccggggtt 3936681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 19479514 - 19479484
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  19479514 acaatgcataatatatgcaaggtccggggtt 19479484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 50906095 - 50906124
Alignment:
Q  5 tgacaatgcataatatatgcaaggtccggg 34  Q
    ||||||||||||||||||||||||||||||    
T  50906095 tgacaatgcataatatatgcaaggtccggg 50906124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 11144703 - 11144671
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||| |||||||    
T  11144703 gacaatgcataatatatgcaaggtctggggttt 11144671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 16304136 - 16304108
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  16304136 gacaatgcataatatatgcaaggtccggg 16304108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 24665026 - 24664998
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  24665026 aatgcataatatatgcaaggtccggggtt 24664998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 37921769 - 37921797
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  37921769 gacaatgcataatatatgcaaggtccggg 37921797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 44815967 - 44815995
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  44815967 aatgcataatatatgcaaggtccggggtt 44815995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 54294457 - 54294429
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  54294457 aatgcataatatatgcaaggtccggggtt 54294429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 8091196 - 8091165
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  8091196 gacaatgcataatatatgcaaggtccggggtt 8091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 12124568 - 12124599
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  12124568 gacaatgcataatatatgcaaggtccggggtt 12124599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 20455914 - 20455945
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  20455914 gacaatgcataatatatgcaaggtccggggtt 20455945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 20565113 - 20565082
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  20565113 gacaatgcataatatatgcaaggtccggggtt 20565082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 24593399 - 24593430
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  24593399 gacaatgcataatatatgcaaggtccggggtt 24593430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 25186280 - 25186249
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  25186280 gacaatgcataatatatgcaaggtccggggtt 25186249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 29544650 - 29544681
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  29544650 gacaatgcataatatatgcaaggtccggggtt 29544681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 31815925 - 31815894
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  31815925 gacaatgcataatatatgcaaggtccggggtt 31815894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 36359337 - 36359368
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  36359337 gacaatgcataatatatgcaaggtccggggtt 36359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 42791318 - 42791349
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtt 37  Q
    ||||||||||||||||||||||||||||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggtt 42791349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 833107 - 833073
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||||| |||||||||    
T  833107 gacaatgcataatatatgcaaggtctggggtttaa 833073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 4122051 - 4122017
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||||| |||||||||    
T  4122051 gacaatgcataatatatgcaaggtctggggtttaa 4122017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 7206148 - 7206182
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    ||||||||||||||||||||||||||| |||||||    
T  7206148 gacaatgcataatatatgcaaggtccgaggtttaa 7206182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 34977227 - 34977261
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||||||||||||||||| ||||||    
T  34977227 gacaatgcataatatatgcaaggtccggagtttaa 34977261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 35287702 - 35287668
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggtttaa 40  Q
    |||||||||||||| ||||||||||||||||||||    
T  35287702 gacaatgcataatagatgcaaggtccggggtttaa 35287668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 16204855 - 16204823
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||||||||||||||||||| |||||||    
T  16204855 gacaatgcataatatatgcaaggtctggggttt 16204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 25612331 - 25612303
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  25612331 gacaatgcataatatatgcaaggtccggg 25612303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 27848184 - 27848212
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  27848184 aatgcataatatatgcaaggtccggggtt 27848212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 31543038 - 31543066
Alignment:
Q  9 aatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||    
T  31543038 aatgcataatatatgcaaggtccggggtt 31543066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 39068746 - 39068714
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||||||||||||||||||| ||||||||||    
T  39068746 gacaatgcataatatatgcaagatccggggttt 39068714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 42066735 - 42066767
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    ||||||||| |||||||||||||||||||||||    
T  42066735 gacaatgcacaatatatgcaaggtccggggttt 42066767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1127 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 1202 - 1172
Alignment:
Q  7 acaatgcataatatatgcaaggtccggggtt 37  Q
    |||||||||||||||||||||||||||||||    
T  1202 acaatgcataatatatgcaaggtccggggtt 1172  T

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Target: scaffold1619 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 1054 - 1082
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  1054 gacaatgcataatatatgcaaggtccggg 1082  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 45435 - 45467
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggggttt 38  Q
    |||||| ||||||||||||||||||||||||||    
T  45435 gacaatacataatatatgcaaggtccggggttt 45467  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 64241 - 64269
Alignment:
Q  6 gacaatgcataatatatgcaaggtccggg 34  Q
    |||||||||||||||||||||||||||||    
T  64241 gacaatgcataatatatgcaaggtccggg 64269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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