View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20076_low_71 (Length: 247)

Name: NF20076_low_71
Description: NF20076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20076_low_71
NF20076_low_71
[»] chr3 (41 HSPs)
chr3 (10-247)||(7976426-7976682)
chr3 (10-117)||(47767459-47767566)
chr3 (10-115)||(37054423-37054528)
chr3 (10-117)||(7302373-7302480)
chr3 (10-117)||(30766580-30766687)
chr3 (10-117)||(42005891-42005998)
chr3 (10-114)||(21307470-21307574)
chr3 (10-117)||(53470367-53470474)
chr3 (10-117)||(34088598-34088705)
chr3 (10-117)||(36397927-36398034)
chr3 (10-117)||(48947632-48947739)
chr3 (10-116)||(53129781-53129887)
chr3 (10-110)||(21730936-21731035)
chr3 (10-117)||(30767131-30767239)
chr3 (10-106)||(38506814-38506910)
chr3 (10-117)||(671557-671664)
chr3 (10-80)||(46706716-46706786)
chr3 (10-131)||(47284141-47284257)
chr3 (10-106)||(2104772-2104868)
chr3 (10-76)||(35279860-35279926)
chr3 (10-106)||(26323394-26323490)
chr3 (10-110)||(52527070-52527170)
chr3 (10-77)||(43863889-43863956)
chr3 (10-93)||(6836997-6837080)
chr3 (10-111)||(47336914-47337015)
chr3 (10-66)||(26547093-26547149)
chr3 (10-93)||(31021730-31021814)
chr3 (47-138)||(9007430-9007516)
chr3 (10-117)||(50168548-50168655)
chr3 (57-117)||(19475843-19475903)
chr3 (10-117)||(31189335-31189442)
chr3 (10-93)||(34396448-34396528)
chr3 (10-106)||(55460378-55460474)
chr3 (70-131)||(44436343-44436404)
chr3 (146-222)||(46296624-46296701)
chr3 (10-75)||(1796168-1796233)
chr3 (60-117)||(31070433-31070490)
chr3 (60-117)||(44436285-44436342)
chr3 (10-63)||(46635927-46635980)
chr3 (11-51)||(1146883-1146923)
chr3 (10-50)||(36635976-36636016)
[»] chr2 (40 HSPs)
chr2 (10-117)||(7167606-7167713)
chr2 (10-117)||(30698308-30698415)
chr2 (10-117)||(7227951-7228058)
chr2 (10-129)||(32839587-32839706)
chr2 (10-131)||(8736380-8736496)
chr2 (10-128)||(7309702-7309820)
chr2 (10-106)||(32840131-32840227)
chr2 (10-117)||(769063-769170)
chr2 (10-117)||(1583748-1583855)
chr2 (10-117)||(11141332-11141439)
chr2 (10-93)||(12263477-12263560)
chr2 (10-117)||(28740623-28740730)
chr2 (10-117)||(33189196-33189303)
chr2 (10-117)||(39630252-39630358)
chr2 (11-117)||(17905681-17905786)
chr2 (10-132)||(44255644-44255768)
chr2 (11-117)||(13017806-13017912)
chr2 (10-106)||(20935744-20935840)
chr2 (10-106)||(41585629-41585725)
chr2 (10-117)||(3092309-3092416)
chr2 (10-93)||(7611827-7611910)
chr2 (10-117)||(45094410-45094517)
chr2 (10-106)||(21504488-21504584)
chr2 (10-68)||(6749233-6749291)
chr2 (10-111)||(11036375-11036476)
chr2 (10-102)||(1730095-1730186)
chr2 (53-133)||(11594819-11594899)
chr2 (10-117)||(35047618-35047725)
chr2 (10-80)||(740768-740838)
chr2 (16-117)||(40026091-40026192)
chr2 (10-74)||(14306746-14306810)
chr2 (57-116)||(11532239-11532298)
chr2 (57-117)||(11793922-11793982)
chr2 (60-117)||(41461590-41461647)
chr2 (57-117)||(10480146-10480206)
chr2 (53-113)||(11606744-11606804)
chr2 (10-106)||(44205597-44205693)
chr2 (61-108)||(11595355-11595402)
chr2 (70-117)||(14537226-14537273)
chr2 (107-135)||(17180293-17180321)
[»] chr5 (44 HSPs)
chr5 (10-117)||(22303806-22303913)
chr5 (10-131)||(35111240-35111360)
chr5 (10-116)||(14834852-14834958)
chr5 (10-111)||(12479940-12480041)
chr5 (10-131)||(33146191-33146307)
chr5 (10-117)||(9894258-9894365)
chr5 (10-117)||(41762151-41762258)
chr5 (10-114)||(30519034-30519137)
chr5 (10-114)||(30559374-30559477)
chr5 (10-117)||(927329-927435)
chr5 (10-133)||(22305110-22305228)
chr5 (10-111)||(10314682-10314783)
chr5 (10-134)||(15270790-15270909)
chr5 (10-106)||(17542297-17542393)
chr5 (10-106)||(34105109-34105205)
chr5 (10-105)||(17492584-17492679)
chr5 (10-117)||(32250034-32250141)
chr5 (11-106)||(37241047-37241142)
chr5 (10-112)||(37241534-37241640)
chr5 (9-108)||(22302557-22302657)
chr5 (21-105)||(28490031-28490115)
chr5 (10-81)||(6772149-6772220)
chr5 (15-117)||(22766979-22767081)
chr5 (14-93)||(28489514-28489593)
chr5 (10-107)||(11601076-11601172)
chr5 (10-111)||(35379376-35379476)
chr5 (10-107)||(17493101-17493198)
chr5 (10-67)||(8264585-8264642)
chr5 (57-117)||(19533890-19533950)
chr5 (57-117)||(37722877-37722937)
chr5 (53-117)||(40090393-40090457)
chr5 (53-111)||(8255060-8255117)
chr5 (57-117)||(25935273-25935333)
chr5 (57-117)||(37145484-37145544)
chr5 (30-105)||(37090320-37090395)
chr5 (10-67)||(17444366-17444424)
chr5 (10-44)||(40089753-40089787)
chr5 (10-93)||(31316212-31316295)
chr5 (10-44)||(9894088-9894122)
chr5 (57-106)||(12064451-12064500)
chr5 (19-80)||(12991276-12991337)
chr5 (19-80)||(13064899-13064960)
chr5 (60-117)||(15374035-15374092)
chr5 (10-78)||(11409247-11409315)
[»] chr1 (47 HSPs)
chr1 (10-116)||(37447841-37447947)
chr1 (10-117)||(44570705-44570812)
chr1 (10-131)||(15467902-15468023)
chr1 (10-131)||(35491170-35491291)
chr1 (10-115)||(39887156-39887261)
chr1 (10-131)||(47820226-47820347)
chr1 (10-133)||(41823099-41823217)
chr1 (10-131)||(48953587-48953702)
chr1 (10-117)||(8224795-8224902)
chr1 (10-117)||(37036888-37036995)
chr1 (10-117)||(49659243-49659350)
chr1 (10-111)||(31166343-31166444)
chr1 (10-106)||(41822482-41822578)
chr1 (10-117)||(946940-947047)
chr1 (11-106)||(37447299-37447394)
chr1 (10-116)||(28632525-28632630)
chr1 (13-106)||(42230758-42230852)
chr1 (10-91)||(41822636-41822717)
chr1 (17-117)||(6470632-6470732)
chr1 (10-117)||(32287871-32287979)
chr1 (10-106)||(49216277-49216373)
chr1 (10-106)||(52135564-52135660)
chr1 (10-117)||(31195483-31195590)
chr1 (10-133)||(50471766-50471884)
chr1 (10-111)||(32647334-32647435)
chr1 (13-117)||(37448344-37448447)
chr1 (10-106)||(44571239-44571335)
chr1 (10-117)||(946402-946508)
chr1 (14-113)||(43622921-43623020)
chr1 (10-80)||(23956301-23956371)
chr1 (10-111)||(10166532-10166632)
chr1 (10-106)||(32128068-32128164)
chr1 (10-93)||(34003512-34003595)
chr1 (10-102)||(13181630-13181722)
chr1 (10-73)||(21267750-21267812)
chr1 (10-102)||(32201811-32201903)
chr1 (10-117)||(51847879-51847985)
chr1 (60-134)||(47541977-47542051)
chr1 (57-117)||(24273206-24273266)
chr1 (57-117)||(26501065-26501125)
chr1 (70-117)||(30190221-30190268)
chr1 (17-92)||(34003429-34003504)
chr1 (56-117)||(47165197-47165258)
chr1 (61-117)||(38277442-38277498)
chr1 (60-131)||(5474474-5474545)
chr1 (8-78)||(1902127-1902197)
chr1 (60-117)||(34756454-34756511)
[»] chr4 (40 HSPs)
chr4 (10-131)||(29091150-29091271)
chr4 (10-131)||(56339151-56339267)
chr4 (10-117)||(2125884-2125991)
chr4 (10-117)||(35470149-35470256)
chr4 (10-131)||(26534506-26534627)
chr4 (10-127)||(40338191-40338303)
chr4 (10-110)||(42776671-42776771)
chr4 (10-117)||(46242483-46242590)
chr4 (10-106)||(17727103-17727199)
chr4 (10-106)||(42775643-42775739)
chr4 (10-106)||(53760729-53760825)
chr4 (31-117)||(1539668-1539754)
chr4 (10-93)||(27284601-27284684)
chr4 (10-117)||(41139500-41139607)
chr4 (12-106)||(52294986-52295080)
chr4 (10-134)||(16300157-16300282)
chr4 (10-113)||(16516202-16516306)
chr4 (10-93)||(31947644-31947725)
chr4 (10-106)||(40548157-40548253)
chr4 (10-117)||(10354369-10354476)
chr4 (10-106)||(46243036-46243130)
chr4 (10-77)||(42776182-42776249)
chr4 (10-93)||(56118569-56118652)
chr4 (10-76)||(13318598-13318664)
chr4 (10-75)||(4490096-4490161)
chr4 (57-117)||(10633059-10633119)
chr4 (60-133)||(857250-857323)
chr4 (6-111)||(52493958-52494061)
chr4 (57-117)||(31473876-31473936)
chr4 (69-117)||(41498574-41498622)
chr4 (10-74)||(47108350-47108414)
chr4 (10-67)||(54566252-54566309)
chr4 (12-111)||(19461677-19461776)
chr4 (10-65)||(30303800-30303855)
chr4 (70-117)||(49111397-49111444)
chr4 (60-117)||(7352839-7352896)
chr4 (11-44)||(24062871-24062904)
chr4 (10-63)||(24705432-24705485)
chr4 (10-67)||(29686015-29686072)
chr4 (60-117)||(42844570-42844627)
[»] chr8 (43 HSPs)
chr8 (10-117)||(24044987-24045094)
chr8 (10-117)||(28324611-28324718)
chr8 (10-111)||(31976531-31976632)
chr8 (10-117)||(8049281-8049388)
chr8 (10-128)||(26520388-26520501)
chr8 (10-111)||(33986037-33986138)
chr8 (10-131)||(34008799-34008915)
chr8 (13-116)||(14266-14369)
chr8 (10-117)||(29257300-29257407)
chr8 (10-117)||(29482756-29482863)
chr8 (10-117)||(44346627-44346734)
chr8 (10-128)||(6416200-6416318)
chr8 (10-111)||(13144616-13144717)
chr8 (10-111)||(31980432-31980533)
chr8 (10-117)||(33377246-33377353)
chr8 (10-117)||(44889381-44889488)
chr8 (10-111)||(9982669-9982770)
chr8 (10-117)||(1088226-1088333)
chr8 (29-131)||(29611388-29611485)
chr8 (10-134)||(36625174-36625293)
chr8 (10-91)||(34388561-34388641)
chr8 (10-117)||(35978956-35979060)
chr8 (10-103)||(43167675-43167768)
chr8 (10-106)||(24510226-24510322)
chr8 (10-116)||(35404691-35404797)
chr8 (10-75)||(40734050-40734115)
chr8 (10-80)||(7079394-7079464)
chr8 (57-135)||(21465569-21465647)
chr8 (10-111)||(15186766-15186867)
chr8 (12-132)||(8469514-8469629)
chr8 (57-117)||(23011761-23011821)
chr8 (10-68)||(10593147-10593205)
chr8 (10-111)||(15718230-15718331)
chr8 (60-133)||(38573470-38573543)
chr8 (57-117)||(36103128-36103188)
chr8 (10-73)||(33422954-33423017)
chr8 (60-117)||(3853643-3853700)
chr8 (60-117)||(3858101-3858158)
chr8 (10-51)||(6460835-6460876)
chr8 (60-117)||(13404902-13404959)
chr8 (57-106)||(30444929-30444978)
chr8 (57-113)||(515528-515584)
chr8 (53-93)||(28190695-28190735)
[»] chr6 (20 HSPs)
chr6 (10-133)||(9697474-9697596)
chr6 (11-117)||(28918192-28918298)
chr6 (11-116)||(31412929-31413034)
chr6 (10-133)||(1195349-1195467)
chr6 (10-133)||(8475177-8475295)
chr6 (11-117)||(1368504-1368610)
chr6 (57-133)||(34364754-34364830)
chr6 (10-93)||(15616300-15616383)
chr6 (10-111)||(26901703-26901804)
chr6 (10-117)||(6358190-6358297)
chr6 (34-113)||(15832497-15832576)
chr6 (57-117)||(13487302-13487362)
chr6 (10-65)||(10105118-10105173)
chr6 (10-73)||(29395458-29395521)
chr6 (20-78)||(10737668-10737726)
chr6 (69-117)||(15299509-15299557)
chr6 (57-117)||(34244966-34245026)
chr6 (10-80)||(413613-413683)
chr6 (60-117)||(9763039-9763096)
chr6 (57-113)||(29889420-29889476)
[»] scaffold0400 (1 HSPs)
scaffold0400 (10-117)||(4437-4544)
[»] scaffold0365 (1 HSPs)
scaffold0365 (10-117)||(5081-5188)
[»] scaffold0169 (1 HSPs)
scaffold0169 (10-117)||(4102-4209)
[»] scaffold0318 (1 HSPs)
scaffold0318 (10-112)||(2899-3000)
[»] chr7 (45 HSPs)
chr7 (10-106)||(32650611-32650707)
chr7 (10-117)||(23455172-23455279)
chr7 (10-117)||(28539093-28539200)
chr7 (10-113)||(30524286-30524389)
chr7 (11-117)||(43791117-43791223)
chr7 (10-131)||(19865479-19865595)
chr7 (10-117)||(9784856-9784963)
chr7 (10-117)||(22391513-22391619)
chr7 (10-117)||(23548536-23548643)
chr7 (10-117)||(25189151-25189258)
chr7 (10-117)||(39342567-39342674)
chr7 (10-106)||(13814919-13815015)
chr7 (10-106)||(26415991-26416087)
chr7 (10-130)||(30587828-30587943)
chr7 (10-106)||(40495755-40495851)
chr7 (10-106)||(45984378-45984474)
chr7 (10-106)||(45988738-45988834)
chr7 (10-117)||(14603187-14603294)
chr7 (10-133)||(30080726-30080844)
chr7 (10-117)||(30629084-30629191)
chr7 (10-117)||(35455831-35455938)
chr7 (10-107)||(3905584-3905681)
chr7 (10-106)||(40667379-40667475)
chr7 (10-93)||(40495281-40495364)
chr7 (10-75)||(18926746-18926811)
chr7 (10-117)||(15990918-15991025)
chr7 (10-106)||(14790151-14790247)
chr7 (10-77)||(42816616-42816683)
chr7 (28-117)||(18789189-18789278)
chr7 (10-78)||(36328721-36328789)
chr7 (28-118)||(18789543-18789633)
chr7 (10-76)||(41443025-41443091)
chr7 (60-133)||(46069402-46069475)
chr7 (57-115)||(29639187-29639245)
chr7 (57-117)||(26162109-26162169)
chr7 (10-66)||(33310882-33310938)
chr7 (60-117)||(31632749-31632806)
chr7 (57-117)||(6498737-6498797)
chr7 (57-117)||(35776927-35776987)
chr7 (10-78)||(45967013-45967081)
chr7 (60-130)||(44915270-44915340)
chr7 (60-117)||(5644704-5644761)
chr7 (85-126)||(26780215-26780256)
chr7 (60-117)||(29065846-29065903)
chr7 (10-42)||(18938937-18938969)
[»] scaffold0129 (2 HSPs)
scaffold0129 (17-117)||(19225-19324)
scaffold0129 (10-117)||(19724-19831)
[»] scaffold0014 (2 HSPs)
scaffold0014 (10-111)||(221135-221236)
scaffold0014 (10-77)||(223688-223755)
[»] scaffold0301 (1 HSPs)
scaffold0301 (10-117)||(7178-7285)
[»] scaffold0337 (2 HSPs)
scaffold0337 (10-133)||(16313-16433)
scaffold0337 (13-114)||(15808-15907)
[»] scaffold0065 (2 HSPs)
scaffold0065 (10-93)||(9525-9608)
scaffold0065 (13-114)||(2850-2949)
[»] scaffold0039 (1 HSPs)
scaffold0039 (10-139)||(109041-109164)
[»] scaffold0047 (1 HSPs)
scaffold0047 (14-93)||(50250-50329)
[»] scaffold0044 (1 HSPs)
scaffold0044 (73-134)||(56284-56345)
[»] scaffold0027 (1 HSPs)
scaffold0027 (57-115)||(10915-10973)


Alignment Details
Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 7976682 - 7976426
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||||||||| |||||| || ||| |||||||||||||||  |||||||||||   ||||| |||| |||||||||||||||    
T  7976682 aaaatacttcataaatttccatcattttaaaaattctttaaattattatccaaacaatagaattcacctcaatgtatttaaattccttcaaaacattaca 7976583  T
Q  110 ttcc-------------ctcatccaaa-cacactcttaagatttaattttccccaattgcaaaacctagaatatcacattatgacgtacaaagaattcca 195  Q
    ||||             |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7976582 ttccttcaaaacattctctcatctaaaacacactcttaggatttaattttccccaattgcaaaacctagaatatcacattatgacgtacaaagaattcca 7976483  T
Q  196 atctaat-----taaatcacaatttctcaactacacagtcaatatcttagagttttc 247  Q
    |||||||     |||||||||||||||||||||||||||||||||||||||||||||    
T  7976482 atctaatctaagtaaatcacaatttctcaactacacagtcaatatcttagagttttc 7976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 47767566 - 47767459
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  47767566 aaaatacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgtaattcacctcaaggtatttgaattccttcaaaacattaca 47767467  T
Q  110 ttccctca 117  Q
    ||||||||    
T  47767466 ttccctca 47767459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 37054528 - 37054423
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  37054528 aaaatacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattaca 37054429  T
Q  110 ttccct 115  Q
    ||||||    
T  37054428 ttccct 37054423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 7302480 - 7302373
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||   ||| |||||| |||||||||||||||    
T  7302480 aaaatacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatctgaattccttcaaaacattaca 7302381  T
Q  110 ttccctca 117  Q
    ||| ||||    
T  7302380 ttctctca 7302373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 30766687 - 30766580
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  30766687 aaaatacttcataaatttctatctttttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattaca 30766588  T
Q  110 ttccctca 117  Q
    ||||||||    
T  30766587 ttccctca 30766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 42005891 - 42005998
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||   ||||| |||| |||||||||||||||    
T  42005891 aaaatacttcataaattttcatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttaaattccttcaaaacattaca 42005990  T
Q  110 ttccctca 117  Q
    ||||||||    
T  42005991 ttccctca 42005998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 21307470 - 21307574
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||| | |||||||||| | |||||||||||||    
T  21307470 aaaatacttcataaatttctatcattttgaaaattttacaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattaca 21307569  T
Q  110 ttccc 114  Q
    |||||    
T  21307570 ttccc 21307574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 53470367 - 53470474
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| || | |||||||||| | |||||||| || |    
T  53470367 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatgaaattcaccccaaagtatttgaattccctcaaaacaataga 53470466  T
Q  110 ttccctca 117  Q
    ||||||||    
T  53470467 ttccctca 53470474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 34088705 - 34088598
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  34088705 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcctaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 34088606  T
Q  110 ttccctca 117  Q
    ||||||||    
T  34088605 ttccctca 34088598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 36397927 - 36398034
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  36397927 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccgaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 36398026  T
Q  110 ttccctca 117  Q
    ||||||||    
T  36398027 ttccctca 36398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 48947739 - 48947632
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | ||||||||||   |||||||| ||||    
T  48947739 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattctctcaaaacaataca 48947640  T
Q  110 ttccctca 117  Q
    ||||||||    
T  48947639 ttccctca 48947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 53129781 - 53129887
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||||||||    
T  53129781 aaaatacttcataaattttcatcattttgaaaatacttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacattaca 53129880  T
Q  110 ttccctc 116  Q
    |||||||    
T  53129881 ttccctc 53129887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 21731035 - 21730936
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||| ||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||    
T  21731035 aaaatagttcataaatttccatcattttaaaaattgtttaaattattattcaaacaatgaaattcatctca-aatatttgaattccttcaaaacattaca 21730937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 30767239 - 30767131
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaa-tatttgaattacttcaaaacattac 108  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||   || |||||||||| ||||| |||||||     
T  30767239 aaaatacttcataaatttccatcattttgaaaattcttcaaattattacccaaacaatggaattcaccttttaagtatttgaattccttcataacattag 30767140  T
Q  109 attccctca 117  Q
    |||||||||    
T  30767139 attccctca 30767131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 38506814 - 38506910
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||| | |||||||||| | ||||||||||    
T  38506814 aaaatactttataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 671557 - 671664
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||| |||||||| || | ||| |||||| | |||||||| ||||    
T  671557 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattacccaaacaatggaattcaccccaaagtatctgaattccctcaaaacaataca 671656  T
Q  110 ttccctca 117  Q
    ||||||||    
T  671657 ttccctca 671664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 46706786 - 46706716
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  46706786 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctca 46706716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 47284141 - 47284257
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||  ||| | |||||||||| | |||||     | |    
T  47284141 aaaatacttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaattcatatcaaagtatttgaattccctcaaa-----ata 47284235  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||||||||||||||||||||    
T  47284236 ttccctcatccaaacacactct 47284257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 2104868 - 2104772
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| ||| | |||||||||| | || |||||||    
T  2104868 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 35279860 - 35279926
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcac 76  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||    
T  35279860 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgtaattcac 35279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 26323490 - 26323394
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||  |  ||| |||||||||||||| | ||||||||| | | |||||||||||| ||||||||||    
T  26323490 aaaatacttcataaatttccatcattttgaaaatcctataaattattatccaaacaacggaattcacctaaaagtatttgaattacctcaaaacatt 26323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 52527170 - 52527070
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||| | |||||||||| |||| |||||| | |||||||||| || || |||||||||    
T  52527170 aaaatacttcataaatttccattattttgaaaattcttcaaattatcaaccaaacaatggaatttacctcaaagtatttgaattcctccataacattaca 52527071  T
Q  110 t 110  Q
    |    
T  52527070 t 52527070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 43863889 - 43863956
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacc 77  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  43863889 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcacc 43863956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 6836997 - 6837080
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||| ||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||| |||| |||| | ||||||||||    
T  6836997 aaaatgcttcataaatttctatcattttgaaaattcttcaaattattattcaaacaatgaatttcaactcaaactatttgaatt 6837080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 47337015 - 47336914
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| |||||||| |||||| |  ||| ||| |||||||||||| ||||||||| |  |||||| |||||  |||||||||||||    
T  47337015 aaaatacttcataaatttctatcatttttaaaattctataaattatcatccaaacaatggaattcacctaaacatatttaaattatctcaaaacattaca 47336916  T
Q  110 tt 111  Q
    ||    
T  47336915 tt 47336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 26547149 - 26547093
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaa 66  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  26547149 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccgaacaa 26547093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 31021814 - 31021730
Alignment:
Q  10 aaaatacttcataaatttccatcattttg-aaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||  ||||||| ||| | ||||||||||    
T  31021814 aaaatacttcataaatttccatcattttgaaaaattcttcaaattattatgcaaacaatagaattcacatcaaagtatttgaatt 31021730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 9007430 - 9007516
Alignment:
Q  47 tcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactcttaagatt 138  Q
    ||||| |||||||||||||||||||||||||| | | ||||||||||  ||||||     |||||||| |||||||||||||||||||||||    
T  9007430 tcaaattattatccaaacaatgaaattcacctaaaagtatttgaattcgttcaaa-----acattcccccatccaaacacactcttaagatt 9007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 50168548 - 50168655
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||| ||||||| |||||||||| ||||||||||| | || | |||||||||||||||| |||||| || | | ||||||| || | |||||||||||||    
T  50168548 aaaaaacttcattaatttccatccttttgaaaattctccatattattatccaaacaatggaattcagctaaaattatttgagtttcctcaaaacattaca 50168647  T
Q  110 ttccctca 117  Q
    || |||||    
T  50168648 ttacctca 50168655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 19475903 - 19475843
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||||| ||| |||||||||||||||||    
T  19475903 atccaaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctca 19475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 31189335 - 31189442
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||| |||||||||| || |||||| || ||| ||| | |||||| || ||||| |||||| | ||||||||||   |||||||||||||    
T  31189335 aaaatacttcataagtttccatcatcttaaaaattatttaaattatcacccaaacgataaaatttacctcaaagtatttgaattctctcaaaacattaca 31189434  T
Q  110 ttccctca 117  Q
    || |||||    
T  31189435 ttacctca 31189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 34396448 - 34396528
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||||||||||| |||||||||||||   | |||||| ||| ||||||| ||||||||| |||||| | ||||||||||    
T  34396448 aaaatacttcataaattcccatcattttgaa---tcttcaaattatcatccaaagaatgaaatttacctcaaagtatttgaatt 34396528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 55460474 - 55460378
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||| |||||||||||||||||||||||| | | || ||| |||||||| ||| ||||||| |   | |||||||||| | ||||||||||    
T  55460474 aaaatacttcgtaaatttccatcattttgaaaattctcctaattatcatccaaacgatggaattcacttacaagtatttgaattccctcaaaacatt 55460378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 44436343 - 44436404
Alignment:
Q  70 aattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactct 131  Q
    ||||||||||| | || ||||||| | ||||||||||||||| || ||||||||||||||||    
T  44436343 aattcacctcaaagtagttgaattccctcaaaacattacatttccccatccaaacacactct 44436404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 46296701 - 46296624
Alignment:
Q  146 ccccaattgcaaaa-cctagaatatcacattatgacgtacaaagaattccaatctaattaaatcacaatttctcaact 222  Q
    |||||||||||||| ||||||| |||||| | ||||||||||||||||   |||||| ||| ||||| ||||||||||    
T  46296701 ccccaattgcaaaatcctagaaaatcacaatctgacgtacaaagaatttatatctaagtaactcacattttctcaact 46296624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 1796168 - 1796233
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattca 75  Q
    ||||||||| |||||||| ||||||||| ||||||  |||||  ||||| | ||||||||||||||    
T  1796168 aaaatactttataaattttcatcattttaaaaattcatcaaatcattattcgaacaatgaaattca 1796233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 31070490 - 31070433
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  31070490 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 31070433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 44436342 - 44436285
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||| | |||| ||||||| | |||||||||||||||||||||    
T  44436342 caaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 46635980 - 46635927
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaa 63  Q
    ||||| |||||||||||| |||||||||||||||| | |||| |||||| ||||    
T  46635980 aaaatgcttcataaattttcatcattttgaaaattctccaaattattattcaaa 46635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 1146883 - 1146923
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaa 51  Q
    ||||||||||||||| || ||||||||||||||| ||||||    
T  1146883 aaatacttcataaatatctatcattttgaaaattcttcaaa 1146923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 36636016 - 36635976
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaa 50  Q
    ||||| |||||||||||||||||||||| |||||| |||||    
T  36636016 aaaatccttcataaatttccatcattttaaaaattattcaa 36635976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 7167606 - 7167713
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  7167606 aaaatacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaagtatttgaattccttcaaaacattaca 7167705  T
Q  110 ttccctca 117  Q
    ||||||||    
T  7167706 ttccctca 7167713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 30698415 - 30698308
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  30698415 aaaatacttcacaaatttccatcattttgaaaattcttcaaactattatccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattaca 30698316  T
Q  110 ttccctca 117  Q
    ||||||||    
T  30698315 ttccctca 30698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 7227951 - 7228058
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   ||||| |||| |||||||||||||||    
T  7227951 aaaatacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgaaatttacctcaaggtatttaaattccttcaaaacattaca 7228050  T
Q  110 ttccctca 117  Q
    ||| ||||    
T  7228051 ttctctca 7228058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 32839587 - 32839706
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||| || ||||||||||| ||||||| |||||| |||||||||||||||| ||||||| ||| | |||||||||| | |||||||||||||    
T  32839587 aaaatacttcatgaaattccatcatttggaaaattcttcaaattattatccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattaca 32839686  T
Q  110 ttccctcatccaaacacact 129  Q
    ||||||||||||||||||||    
T  32839687 ttccctcatccaaacacact 32839706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 8736380 - 8736496
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | |||||||||| | |||||     |||    
T  8736380 aaaatacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaa-----aca 8736474  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||||||||||||||||||||    
T  8736475 ttccctcatccaaacacactct 8736496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 7309702 - 7309820
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| |||| |||||||| || | |||||||||| | | |||||| ||||    
T  7309702 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaataatggaattcaccccaaagtatttgaattcccttaaaacaataca 7309801  T
Q  110 ttccctcatccaaacacac 128  Q
    ||||| |||||||||||||    
T  7309802 ttcccccatccaaacacac 7309820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 32840131 - 32840227
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||| |||| | ||||||||||    
T  32840131 aaaatacttcatgaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 769170 - 769063
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  769170 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 769071  T
Q  110 ttccctca 117  Q
    ||||||||    
T  769070 ttccctca 769063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 1583748 - 1583855
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  1583748 aaaatacttcataaatttccatcattttgaaaatacttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 1583847  T
Q  110 ttccctca 117  Q
    ||||||||    
T  1583848 ttccctca 1583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 11141439 - 11141332
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  11141439 aaaatacttcataaatttccatcattttgaaaatacttcaaattattatccaaacaatgtaattcaccccaaagtatttgaattcccttaaaacaataca 11141340  T
Q  110 ttccctca 117  Q
    ||||||||    
T  11141339 ttccctca 11141332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 12263560 - 12263477
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  12263560 aaaatacttcataaatttccatcattttgaaaaaatttcaaattattatccaaacaatgaaattcaactcaaaatatttgaatt 12263477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 28740730 - 28740623
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||| |||| || ||| | |||||||||| | |||||||||||||    
T  28740730 aaaatacttcataaatttccatcattttgaaaattcttcaaattatcatctaaacaatggaatttacatcaaagtatttgaattccctcaaaacattaca 28740631  T
Q  110 ttccctca 117  Q
    ||||||||    
T  28740630 ttccctca 28740623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 33189196 - 33189303
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  33189196 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 33189295  T
Q  110 ttccctca 117  Q
    ||||||||    
T  33189296 ttccctca 33189303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 39630358 - 39630252
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||  ||||| ||||| |||||||||||| | |||||||| ||||    
T  39630358 aaaatacttcataaatttccatcattttgaaaatagttcaaattattatccaaacaatagaattcccctca-aatatttgaattccctcaaaacaataca 39630260  T
Q  110 ttccctca 117  Q
    ||||||||    
T  39630259 ttccctca 39630252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 17905786 - 17905681
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    ||||| |||||||||||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  17905786 aaatatttcataaatttccatcattttgaaaatccttcaaattattatccaaa-aatggaattcacctcaaaatatttgaattcctttaaaacattacat 17905688  T
Q  111 tccctca 117  Q
    || ||||    
T  17905687 tctctca 17905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 44255768 - 44255644
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt--a 107  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  |||||||| || | ||||||||||   |||||||| |  |    
T  44255768 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcaccccaaagtatttgaattctctcaaaacaataaa 44255669  T
Q  108 cattccctcatccaaacacactctt 132  Q
    ||||||  |||||||||||||||||    
T  44255668 cattcctccatccaaacacactctt 44255644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 13017912 - 13017806
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    ||||| ||||||||||| |||||||||||||||  |||||| |||||||||||||||| ||||||||||| | |||||||||| | | |||| |||||||    
T  13017912 aaatatttcataaattttcatcattttgaaaatccttcaaattattatccaaacaatggaattcacctcaaagtatttgaattcccttaaaatattacat 13017813  T
Q  111 tccctca 117  Q
    |||||||    
T  13017812 tccctca 13017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20935840 - 20935744
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| ||||||| ||| | |||||||||| | ||||||||||    
T  20935840 aaaatacttcataaatttcaatcattttgaaaattcttcaaattatcatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 41585629 - 41585725
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||| || ||||| ||| | |||||||||| | ||||||||||    
T  41585629 aaaatacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaataaatttcacttcaaagtatttgaattccctcaaaacatt 41585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 3092416 - 3092309
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||||||||||||||| |||| ||| || | |||||||||| | |||||||| ||||    
T  3092416 aaaatacttcataaatttctatcattttgaaaatgcttgaaattattatccaaacaatggaatttaccccaaagtatttgaatttcctcaaaacaataca 3092317  T
Q  110 ttccctca 117  Q
    ||||||||    
T  3092316 ttccctca 3092309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 7611827 - 7611910
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||| ||| | ||||||||||    
T  7611827 aaaatacttcataaatttccatcattttgaaaattcttcaaattcttatccaaacaatggaattcacatcaaagtatttgaatt 7611910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 45094410 - 45094517
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||| | | | || || |||| | ||||||||||| |    
T  45094410 aaaatacttcataaatttccatcattttgaaaattcttcaaattcttatccaaacaatggaattcactttaaagtagttaaattccctcaaaacattata 45094509  T
Q  110 ttccctca 117  Q
    ||||||||    
T  45094510 ttccctca 45094517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21504584 - 21504488
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||  | |||||||||||||| |||||| |||||| ||||||||| |||||| |||| |||||||||||| | ||||||||||    
T  21504584 aaaatacttcataaattaacttcattttgaaaattcttcaaattattattcaaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 6749291 - 6749233
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatg 68  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  6749291 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatg 6749233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 11036476 - 11036375
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||| | || ||| ||||||| ||||   |||||||||| ||| |||||||||||    
T  11036476 aaaatacttcataaatttccatcattttaaaaattcttcaaattattattctaataataaaattcatctcaatgtatttgaattcctttaaaacattaca 11036377  T
Q  110 tt 111  Q
    ||    
T  11036376 tt 11036375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 1730186 - 1730095
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaa 102  Q
    ||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||| |||| | ||||||    
T  1730186 aaaattcttcataaatt-ccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaagtatttaaattccctcaaaa 1730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 11594899 - 11594819
Alignment:
Q  53 tattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactctta 133  Q
    ||||||||||||||| |||||||||||| | |||||| ||| |||||||| |||||||||||| ||||||||||| |||||    
T  11594899 tattatccaaacaattaaattcacctcaaagtatttgtattccttcaaaatattacattcccttatccaaacacattctta 11594819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 35047618 - 35047725
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||| |||||||||||| |||||||||||  |||||| ||||||||||||| || |||||||| || | |||||||||| | | |||||| ||||    
T  35047618 aaaatactttataaatttccattattttgaaaatgcttcaaattattatccaaacattggaattcaccccaaagtatttgaattcccttaaaacaataca 35047717  T
Q  110 ttccctca 117  Q
    || |||||    
T  35047718 tttcctca 35047725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 740838 - 740768
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||| || |||||||| ||||||||||||    
T  740838 aaaatacttcataaatttccattattttgaaaattcttcaaattatcattcaaacaataaaattcacctca 740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 40026192 - 40026091
Alignment:
Q  16 cttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccct 115  Q
    |||||||||||| ||||||||| ||||  ||| |||||||||| ||||||||  ||||||||||| | ||||| |||| | ||||||||||| ||| |||    
T  40026192 cttcataaatttacatcattttaaaaaaatttaaaactattattcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacct 40026093  T
Q  116 ca 117  Q
    ||    
T  40026092 ca 40026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 14306746 - 14306810
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattc 74  Q
    |||||| ||||||||||| ||||||||| |||||| || ||| ||||||||||||||||||||||    
T  14306746 aaaataattcataaattttcatcattttaaaaattatttaaattattatccaaacaatgaaattc 14306810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 11532239 - 11532298
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctc 116  Q
    |||||||||||| ||||||||||| | |||||||||| | ||||||||||||||||||||    
T  11532239 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctc 11532298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 11793982 - 11793922
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  11793982 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 11793922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 41461590 - 41461647
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  41461590 caaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctca 41461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 10480206 - 10480146
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||  |||||||||||||||||    
T  10480206 atccaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctca 10480146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 11606804 - 11606744
Alignment:
Q  53 tattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattcc 113  Q
    ||||||||||||||| |||||||||||| | |||||| ||| ||| |||| ||||||||||    
T  11606804 tattatccaaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattcc 11606744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 44205597 - 44205693
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||| ||||||||||||||||||||||| |||||| |||||  ||| ||||||| |||  |||| || | | | |||||||||| | ||||||||||    
T  44205597 aaaacacttcataaatttccatcattttcaaaattcttcaatttatcatccaaataatagaatttacataaaagtatttgaattccctcaaaacatt 44205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  61 aaacaatgaaattcacctcagaatatttgaattacttcaaaacattac 108  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 14537273 - 14537226
Alignment:
Q  70 aattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||    
T  14537273 aattcacctcaaagtagttgaattacctcaaaacattacattccctca 14537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 135
Target Start/End: Complemental strand, 17180321 - 17180293
Alignment:
Q  107 acattccctcatccaaacacactcttaag 135  Q
    |||||||||||||||||||||||||||||    
T  17180321 acattccctcatccaaacacactcttaag 17180293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 22303806 - 22303913
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  22303806 aaaatacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattaca 22303905  T
Q  110 ttccctca 117  Q
    ||||||||    
T  22303906 ttccctca 22303913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 35111360 - 35111240
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| ||||||||||||| || |||||| |||||||||||||||  || |||| ||| |||||||||||| |||||||||||||||    
T  35111360 aaaatacttcataaattttcatcattttgaaagttcttcaaattattatccaaacaatagaactcacatcaaaatatttgaattccttcaaaacattaca 35111261  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  35111260 ttccc-catccaaacacactct 35111240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 14834958 - 14834852
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||| | | |||||||||||    
T  14834958 aaaatacttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttggattcccttaaaacattaca 14834859  T
Q  110 ttccctc 116  Q
    |||||||    
T  14834858 ttccctc 14834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 12480041 - 12479940
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| | |||||||||| | ||||||| |||||    
T  12480041 aaaatacttcatgaatttccatcattttgaaaattcttcaaattattatctaaacaatgaaattcacctcaaagtatttgaatttcctcaaaactttaca 12479942  T
Q  110 tt 111  Q
    ||    
T  12479941 tt 12479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 33146307 - 33146191
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | |||||||||| | |||||     |||    
T  33146307 aaaatacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaa-----aca 33146213  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  33146212 ttcccccatccaaacacactct 33146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 9894258 - 9894365
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| | |||||||||| | |   |||||||||    
T  9894258 aaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctggtaacattaca 9894357  T
Q  110 ttccctca 117  Q
    ||||||||    
T  9894358 ttccctca 9894365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 41762151 - 41762258
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  41762151 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 41762250  T
Q  110 ttccctca 117  Q
    ||||||||    
T  41762251 ttccctca 41762258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 30519137 - 30519034
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| || ||||||||| || |||||||||||| | ||| |||||||||    
T  30519137 aaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaaac-ataaaattcaccgcaaaatatttgaattccctcataacattaca 30519039  T
Q  110 ttccc 114  Q
    |||||    
T  30519038 ttccc 30519034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 30559477 - 30559374
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| || ||||||||| || |||||||||||| | ||| |||||||||    
T  30559477 aaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaaac-ataaaattcaccgcaaaatatttgaattccctcataacattaca 30559379  T
Q  110 ttccc 114  Q
    |||||    
T  30559378 ttccc 30559374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 927435 - 927329
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  927435 aaaatacttcataaatttccat-attttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 927337  T
Q  110 ttccctca 117  Q
    ||||||||    
T  927336 ttccctca 927329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 22305228 - 22305110
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| ||||||||||| | || ||||||| | |||||     |||    
T  22305228 aaaatacttcataaatttccttcattttgaaaattctacaaattattatccaaacaatggaattcacctcaaagtagttgaattccctcaaa-----aca 22305134  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| ||||||||||||||||||    
T  22305133 ttcccccatccaaacacactctta 22305110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10314783 - 10314682
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||  ||||||| ||| |||||||||||| | | |||| ||||||    
T  10314783 aaaatacttcataaattttcatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaaatatttgaattcccttaaaatattaca 10314684  T
Q  110 tt 111  Q
    ||    
T  10314683 tt 10314682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 15270790 - 15270909
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||| ||| | |||| |||||| ||||||||| ||||||||||| | |||||||||| | ||||||||||       
T  15270790 aaaatacttcataaatttccatcattttgaatattctacaaattattattcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt--- 15270886  T
Q  110 ttccctcatccaaacacactcttaa 134  Q
      ||  |||||||||||||||||||    
T  15270887 --cctccatccaaacacactcttaa 15270909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 17542297 - 17542393
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||| || ||| |||||| ||||||||| ||||||||||| | |||||||||| | ||||||||||    
T  17542297 aaaatacttcataaatttccatcattttaaaaattctttaaattattattcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 34105205 - 34105109
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||||||||   ||||||||||    
T  34105205 aaaatacttcgtaaatttctatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaagtatttgaattttctcaaaacatt 34105109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 17492584 - 17492679
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacat 105  Q
    |||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||||||| ||||||||||| | |||||||||| | |||||||||    
T  17492584 aaaatacttcttaaattttcatcattttgaaaattcttcaaattatcatccaaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 32250034 - 32250141
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| |||||||||| |||||| || ||| |||||||||||||||| |||||| ||||   |||||||||| | ||||||||||||     
T  32250034 aaaatacttcataaattaccatcattttaaaaattctttaaattattatccaaacaatggaattcatctcaaggtatttgaattccctcaaaacattact 32250133  T
Q  110 ttccctca 117  Q
    ||||||||    
T  32250134 ttccctca 32250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 37241047 - 37241142
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||| | ||||| |||| | | ||||||||    
T  37241047 aaatacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttcaattccctgaaaacatt 37241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 37241534 - 37241640
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatga----aattcacctcagaatatttgaattacttcaaaacat 105  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  |    |||||| |||| | |||||||||| | |||||||||    
T  37241534 aaaatacttcataaatttccatcattttgaaaattcttcaaaatattatccaaacaaatagatcaattcagctcaaagtatttgaattccctcaaaacat 37241633  T
Q  106 tacattc 112  Q
    |||||||    
T  37241634 tacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 22302657 - 22302557
Alignment:
Q  9 gaaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaa-tatttgaattacttcaaaacatta 107  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| ||||| |||   || |||||||||| | |||||||||||    
T  22302657 gaaaatacttcataaatttccatcattttgaaaaatcttcaaattattatccaaacaatggaattcgccttttaagtatttgaattccctcaaaacatta 22302558  T
Q  108 c 108  Q
    |    
T  22302557 c 22302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 28490115 - 28490031
Alignment:
Q  21 taaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacat 105  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||| ||||||||||| | |||||||||| | |||||||||    
T  28490115 taaatttccatcattttgaaaattcctcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 6772149 - 6772220
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcag 81  Q
    ||||||||||||||||||||||| |||||| |||| |||||| ||| |||||||||||||||||||||||||    
T  6772149 aaaatacttcataaatttccatcgttttgataattattcaaattatcatccaaacaatgaaattcacctcag 6772220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 22767081 - 22766979
Alignment:
Q  15 acttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccc 114  Q
    ||||| ||||||||||||||| |||||||| || ||| |||||||||||||||  ||||||||| | | |||||||||| | ||||||||||| ||||||    
T  22767081 acttcgtaaatttccatcattctgaaaattctttaaattattatccaaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccc 22766982  T
Q  115 tca 117  Q
    |||    
T  22766981 tca 22766979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 28489593 - 28489514
Alignment:
Q  14 tacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||||||||||||||||| |||||| || ||| ||||||| |||||||| ||||||||||| | ||||||||||    
T  28489593 tacttcataaatttccatcattttaaaaattctttaaattattatcgaaacaatggaattcacctcaaagtatttgaatt 28489514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 11601172 - 11601076
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatta 107  Q
    ||||||||||| ||||| |||  |||||||||||| |||||| ||| ||||||| ||| |||||||||||| | |||||||||| |||||||||||||    
T  11601172 aaaatacttcagaaatt-ccacaattttgaaaattcttcaaattatcatccaaataataaaattcacctcaaattatttgaattccttcaaaacatta 11601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 35379476 - 35379376
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||| ||||||||||| | |||||| ||| |||||| |||| |||||||| ||| |  ||||||||| | |||||||||||||    
T  35379476 aaaatacttcataaatttccaccattttgaaaa-tcttcaaattatcatccaatcaataaaattcacttcaaagaatttgaattccctcaaaacattaca 35379378  T
Q  110 tt 111  Q
    ||    
T  35379377 tt 35379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 17493101 - 17493198
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcaga-atatttgaattacttcaaaacatta 107  Q
    ||||||||| ||||||||||||||||||||||||| | |||| ||| |||||||||||| |||||| || ||| ||||||||||| | || ||||||||    
T  17493101 aaaatactttataaatttccatcattttgaaaattctccaaattatcatccaaacaatggaattcatct-agatatatttgaatttcctccaaacatta 17493198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 8264642 - 8264585
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaat 67  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||    
T  8264642 aaaatacttcataaatttccatcattttggaaattcttcaaattattatctaaacaat 8264585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 19533890 - 19533950
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  19533890 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctca 19533950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 37722877 - 37722937
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | |||||||||||||||||||||    
T  37722877 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctca 37722937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 40090393 - 40090457
Alignment:
Q  53 tattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||||| ||||||||||| | |||||||||| | ||||||||||||||| |||||    
T  40090393 tattatccaaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctca 40090457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 8255117 - 8255060
Alignment:
Q  53 tattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacatt 111  Q
    |||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||    
T  8255117 tattatccaaacaatgaaattcacct-aaaatatttgaattccctcaaaacattacatt 8255060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 25935273 - 25935333
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  25935273 atccaaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctca 25935333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 37145484 - 37145544
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||||||||||||| | ||||||||||   ||| |||||||||||||||||    
T  37145484 atccaaacaatgaaattcacctcaaagtatttgaattctctcataacattacattccctca 37145544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 37090395 - 37090320
Alignment:
Q  30 atcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacat 105  Q
    ||||||||||||||| | ||  ||||||||||||||||| ||||||| | | |||||||||||| | |||||||||    
T  37090395 atcattttgaaaattctccatgctattatccaaacaatggaattcacataaaaatatttgaatttcctcaaaacat 37090320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 17444366 - 17444424
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttc-aaactattatccaaacaat 67  Q
    ||||||||||||||||||||||||||||||||| || || |||  ||||||||||||||    
T  17444366 aaaatacttcataaatttccatcattttgaaaaattctctaaatcattatccaaacaat 17444424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 40089753 - 40089787
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatt 44  Q
    |||||||||||||||||||||||||||||||||||    
T  40089753 aaaatacttcataaatttccatcattttgaaaatt 40089787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 31316295 - 31316212
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||| |||||||||||||||||||||  |||||| |||||| ||| ||||||| |||  |||||| |||| | | ||||||||    
T  31316295 aaaatgcttcataaatttccatcatttaaaaaattcttcaaattatcatccaaataatagaattcatctcaaagtgtttgaatt 31316212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 9894088 - 9894122
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatt 44  Q
    ||||||||||||||||| |||||||||||||||||    
T  9894088 aaaatacttcataaattcccatcattttgaaaatt 9894122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 12064451 - 12064500
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||| | ||||| |||| | ||||||||||    
T  12064451 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 12991276 - 12991337
Alignment:
Q  19 cataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    ||||||||| ||| ||||| ||||  ||||||| |||||||||||||||  |||||||||||    
T  12991276 cataaattttcattattttaaaaaaatttcaaattattatccaaacaatagaattcacctca 12991337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 13064899 - 13064960
Alignment:
Q  19 cataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    ||||||||| ||| ||||| ||||  ||||||| |||||||||||||||  |||||||||||    
T  13064899 cataaattttcattattttaaaaaaatttcaaattattatccaaacaatagaattcacctca 13064960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 15374035 - 15374092
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||| ||| || ||||||| | |||||||||||||||||||||    
T  15374035 caaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctca 15374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 11409315 - 11409247
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacct 78  Q
    ||||||||||| |||||||||||||||| |||||| | |||| || |||  ||| ||||||||| ||||    
T  11409315 aaaatacttcacaaatttccatcattttaaaaattctccaaattactatttaaataatgaaatttacct 11409247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 37447841 - 37447947
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  37447841 aaaatacttcataaatttccatcattttgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattaca 37447940  T
Q  110 ttccctc 116  Q
    |||||||    
T  37447941 ttccctc 37447947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 44570812 - 44570705
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  44570812 aaaatacttcataaatttccatcatttcgaaaattcttcaaactattatccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattaca 44570713  T
Q  110 ttccctca 117  Q
    ||||||||    
T  44570712 ttccctca 44570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 15467902 - 15468023
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  15467902 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 15468001  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||||||||||||||||||||    
T  15468002 ttccctcatccaaacacactct 15468023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 35491291 - 35491170
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||| ||||||| ||||   ||||||| || ||    
T  35491291 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatatcaaaatatttaaattctctcaaaacgttgca 35491192  T
Q  110 ttccctcatccaaacacactct 131  Q
    |||||||||| |||||||||||    
T  35491191 ttccctcatcaaaacacactct 35491170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 39887261 - 39887156
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||| | |||||||||| ||||||||||| | |    
T  39887261 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcata 39887162  T
Q  110 ttccct 115  Q
    ||||||    
T  39887161 ttccct 39887156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 47820347 - 47820226
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||||||  | | |||||||||| | | |||||| ||||    
T  47820347 aaaatacttcataaatttccatcattttaaaaatgcttcaaattattatccaaacaatgaaattcaccctaaagtatttgaattcccttaaaacaataca 47820248  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  47820247 ttcccccatccaaacacactct 47820226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 41823099 - 41823217
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||   |||||||||| |||||||     |||    
T  41823099 aaaatacttcataaatttccattattttgaaaattcttcaaactattatccaaacaatggaattcatctcaaggtatttgaattccttcaaa-----aca 41823193  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| ||||||||||||||||||    
T  41823194 ttcccccatccaaacacactctta 41823217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 48953702 - 48953587
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||  ||||||||||| |||||||||||| |||||||     |||    
T  48953702 aaaatacttcataaatatccatcattttgaaaattcttcaaattattatccaaacaatagaattcacctca-aatatttgaattccttcaaa-----aca 48953609  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  48953608 ttcccccatccaaacacactct 48953587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 8224902 - 8224795
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||| ||||||| ||| | ||||| |||| | |||||||||||||    
T  8224902 aaaatacttcataaatttccatcattttgaaaattctttaaattatcatccaaacaatggaattcacatcaaagtatttcaattccctcaaaacattaca 8224803  T
Q  110 ttccctca 117  Q
    ||||||||    
T  8224802 ttccctca 8224795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 37036888 - 37036995
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||| |||| || ||| |||||||||||| | |||||||||||||    
T  37036888 aaaatacttcataaatttctatcattttgaaaattcttcaaattattatccgaacaatggaatttacatcaaaatatttgaattccctcaaaacattaca 37036987  T
Q  110 ttccctca 117  Q
    ||| ||||    
T  37036988 ttcactca 37036995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 49659350 - 49659243
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| | ||||| |||| | ||  |||||||||    
T  49659350 aaaatacttcataaattaccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttaaattccctcgtaacattaca 49659251  T
Q  110 ttccctca 117  Q
    ||||||||    
T  49659250 ttccctca 49659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 31166444 - 31166343
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||  |||||| |||| |||||||| ||| | |||||||||||||    
T  31166444 aaaatacttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatagaattcatctcaaaatatttgcattccatcaaaacattaca 31166345  T
Q  110 tt 111  Q
    ||    
T  31166344 tt 31166343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 41822482 - 41822578
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| || | | |||||||||| | ||||||||||    
T  41822482 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 947047 - 946940
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||| |||||||||||| ||||||||||||||  |||||| |||||||||||||||| ||||||||||| | |||||||||| | |||||| | ||||    
T  947047 aaaatatttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcacctcatagtatttgaatttcctcaaaataataca 946948  T
Q  110 ttccctca 117  Q
    ||||||||    
T  946947 ttccctca 946940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 37447299 - 37447394
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||| | ||||||||||   ||||||||||    
T  37447299 aaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 28632525 - 28632630
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| |||||||||||||||| || ||| |||||||||||||||| ||||||||||| | || |||||||   |||||||||||||    
T  28632525 aaaatacttcataaattttcatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagta-ttgaattctctcaaaacattaca 28632623  T
Q  110 ttccctc 116  Q
    |||||||    
T  28632624 ttccctc 28632630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 42230852 - 42230758
Alignment:
Q  13 atacttcataaatttccatcattttgaaaatttttcaaact-attatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||    
T  42230852 atacttcataaatttccatcattttaaaaattcttcaaaattattatccaaacaatgaaattcacttcaaaatatttaaattacctcaaaacatt 42230758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 41822636 - 41822717
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaa 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||| | ||||||||    
T  41822636 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatctcaaagtatttgaa 41822717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 6470632 - 6470732
Alignment:
Q  17 ttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctc 116  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||| ||||||| |  ||||||||| | |||||||||||||||| |||    
T  6470632 ttcataaatttccatcattttgaaaattcttcaaattattattcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctc 6470731  T
Q  117 a 117  Q
    |    
T  6470732 a 6470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 32287871 - 32287979
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaac-aatgaaattcacctcagaatatttgaattacttcaaaacattac 108  Q
    ||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||| |||| | ||||| ||| | |||||||||| | ||||||||||||    
T  32287871 aaaatactttataaatttccatcattttggaaattcttcaaattattatccaaactaatggatttcacttcaaagtatttgaatttcctcaaaacattac 32287970  T
Q  109 attccctca 117  Q
    |||||||||    
T  32287971 attccctca 32287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 49216277 - 49216373
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||| |||||||||||| |||||| | |||||||||| | || |||||||    
T  49216277 aaaatacttcataaatttccatcattttgaaaattctttaaattattatcccaacaatgaaatttacctcaaagtatttgaattccctcgaaacatt 49216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 52135564 - 52135660
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||| ||||| |||| | |||||||||||| | ||||||||||    
T  52135564 aaaatacttcataaatttccatcattttaaaaattcttcaaattatcatccaaacaataaaatttacctaaaaatatttgaattccctcaaaacatt 52135660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 31195590 - 31195483
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||| |||||||  |||||||| |||||| |||||| |||||| ||||||||| ||||||||||| ||||||| |||| | ||| |||||||||    
T  31195590 aaaatacttcgtaaatttttatcattttaaaaattcttcaaattattatacaaacaatggaattcacctcaaaatatttaaatttcctcagaacattaca 31195491  T
Q  110 ttccctca 117  Q
    ||||||||    
T  31195490 ttccctca 31195483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 50471884 - 50471766
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||| ||||||||||||||||||||||| || ||| ||||||||||||||| |||||||||| | | |||||||||| | |||||     ||     
T  50471884 aaaatacttcaaaaatttccatcattttgaaaattctttaaattattatccaaacaataaaattcacctgaaagtatttgaattccctcaaa-----act 50471790  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| ||||||||||||||||||    
T  50471789 ttcccccatccaaacacactctta 50471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 32647435 - 32647334
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| || |||||||||||||  ||||||| || | |||||||||| | |||||||| ||||    
T  32647435 aaaatacttcataaatttccatcattttgaaaatgcttcaaattaatatccaaacaatggtattcaccccaaagtatttgaatttcctcaaaacaataca 32647336  T
Q  110 tt 111  Q
    ||    
T  32647335 tt 32647334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 37448344 - 37448447
Alignment:
Q  13 atacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattc 112  Q
    |||||||||||||||||||||||||||||||| | |||| || ||||||||||||| ||||||| ||| | ||||| |||| | ||||||||||||||||    
T  37448344 atacttcataaatttccatcattttgaaaattctccaaatta-tatccaaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattc 37448442  T
Q  113 cctca 117  Q
     ||||    
T  37448443 tctca 37448447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 44571335 - 44571239
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||| |||||||||||||||||| |||||| || ||| |||||||||||||||| ||||||| ||| | |||||||||| | ||||||||||    
T  44571335 aaaatactttataaatttccatcattttaaaaattctttaaattattatccaaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 946508 - 946402
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||  |||||| | || | ||||| |||| | |||||||| ||||    
T  946508 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatagaattcatc-caaagtatttaaattccctcaaaacaataca 946410  T
Q  110 ttccctca 117  Q
    ||||||||    
T  946409 ttccctca 946402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 43622921 - 43623020
Alignment:
Q  14 tacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattcc 113  Q
    |||||| ||||||| |||||||||||||||| |||||| |||||| |||| |||||||||||||||| | ||||| ||||   |||||||||||||||||    
T  43622921 tacttcgtaaattttcatcattttgaaaattcttcaaattattattcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattcc 43623020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 23956301 - 23956371
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    ||||||||| ||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  23956301 aaaatactttataaatttccatcatattgataatttttcaaattataatccaaacaatgaaattcacctca 23956371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 10166632 - 10166532
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||| ||||||||||| | |||| ||| || ||||||||||||||||||| |  |||||||| || |||||||||||||||    
T  10166632 aaaatacttcataaatttc-atcgttttgaaaattctccaaattatcattcaaacaatgaaattcacctaaatatatttgagttccttcaaaacattaca 10166534  T
Q  110 tt 111  Q
    ||    
T  10166533 tt 10166532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 32128164 - 32128068
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||| ||||||||| ||||||||||||||||| |||||| ||||||  |||||||| |||||||| || | |||||||||| | ||||||||||    
T  32128164 aaaatacctcataaattcccatcattttgaaaattcttcaaattattattaaaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 34003595 - 34003512
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||| ||||||||||||||||||||||| ||||  ||||| ||| |||||||||||| ||||||||||| | ||||||||||    
T  34003595 aaaatatttcataaatttccatcattttgataattcatcaaattatcatccaaacaatggaattcacctcaaagtatttgaatt 34003512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 13181722 - 13181630
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaa 102  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| |||  |||| | |||| | |||||||||| | ||||||    
T  13181722 aaaatacttcataaatttccatcattttgaatattcttcaaattattatccaaaaaatataattaatctcaaagtatttgaattccctcaaaa 13181630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 21267750 - 21267812
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaatt 73  Q
    ||||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  21267750 aaaattcttcataaatt-ccatcattttgaaaattcttcaaattattatccaaacaatgaaatt 21267812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 32201903 - 32201811
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaacta-ttatccaaacaatgaaattcacctcagaatatttgaattacttcaaaa 102  Q
    ||||||||||| ||||| | ||||||||||||||| |||||| || |||||||||||||| ||||||||| | || ||||||||| ||||||||    
T  32201903 aaaatacttca-aaattccaatcattttgaaaattcttcaaattaattatccaaacaatggaattcaccttaaaacatttgaattccttcaaaa 32201811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 51847985 - 51847879
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||| |||||||||||||||| | || ||| | |||| ||| |||||||| ||| ||||||||| | | |||||||||| ||| |||||||||||    
T  51847985 aaaatacttgataaatttccatcattcttaatattctccaaattatcatccaaacgatggaattcacct-aaagtatttgaatttctttaaaacattaca 51847887  T
Q  110 ttccctca 117  Q
    || |||||    
T  51847886 ttacctca 51847879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 47541977 - 47542051
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactcttaa 134  Q
    ||||||||||||||||||||| | ||||| ||||   ||| ||||||||||||||  ||||||||||||||||||    
T  47541977 caaacaatgaaattcacctcaaagtatttaaattctctcataacattacattcccctatccaaacacactcttaa 47542051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 24273206 - 24273266
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  24273206 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 24273266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 26501065 - 26501125
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||| ||| | |||||||||| | |||||||||||||||||||||    
T  26501065 atccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctca 26501125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 30190221 - 30190268
Alignment:
Q  70 aattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  30190221 aattcacctcaaaatagttgaattacctcaaaacattacattccctca 30190268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 34003504 - 34003429
Alignment:
Q  17 ttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaat 92  Q
    ||||||||||||  ||||||||||||||  ||||| ||| ||||||| |||| ||||||||||| | |||||||||    
T  34003504 ttcataaatttctctcattttgaaaattcatcaaattatcatccaaataatggaattcacctcaaagtatttgaat 34003429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 47165197 - 47165258
Alignment:
Q  56 tatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||||| ||||||||| | | |||||||||| | ||||||||||||||| |||||    
T  47165197 tatccaaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctca 47165258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 38277498 - 38277442
Alignment:
Q  61 aaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||  ||||||||||| | || ||||||| |||||||||||||||||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctca 38277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 5474474 - 5474545
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactct 131  Q
    ||||||||  ||||||||| | | || ||||||| | ||||||||||||||||||  |||||||||||||||    
T  5474474 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcccctatccaaacacactct 5474545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 1902197 - 1902127
Alignment:
Q  8 agaaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacct 78  Q
    ||||||||| |||| ||||||||||||||| |||||| |  ||| ||| ||||||||||| ||||| ||||    
T  1902197 agaaaatacctcatgaatttccatcattttaaaaattctctaaattatcatccaaacaataaaatttacct 1902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 34756511 - 34756454
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  34756511 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 34756454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 29091271 - 29091150
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| ||| | |||||||||| | |||||||||||||    
T  29091271 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaattccctcaaaacattaca 29091172  T
Q  110 ttccctcatccaaacacactct 131  Q
    |||||||||||||| |||||||    
T  29091171 ttccctcatccaaagacactct 29091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 56339267 - 56339151
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| | |||||||||| | |||||     |||    
T  56339267 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcacatcaaagtatttgaattccctcaaa-----aca 56339173  T
Q  110 ttccctcatccaaacacactct 131  Q
    |||| |||||||||||||||||    
T  56339172 ttccatcatccaaacacactct 56339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 2125991 - 2125884
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  2125991 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 2125892  T
Q  110 ttccctca 117  Q
    ||||||||    
T  2125891 ttccctca 2125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 35470256 - 35470149
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  35470256 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 35470157  T
Q  110 ttccctca 117  Q
    ||||||||    
T  35470156 ttccctca 35470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 26534627 - 26534506
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||| |||||| ||||||||||||||| || ||| |||||||||||||||  |||||||  || | |||||||||| | |||||||||||||    
T  26534627 aaaatacttcatgaatttctatcattttgaaaattcttgaaattattatccaaacaatagaattcacaacaaagtatttgaattccctcaaaacattaca 26534528  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  26534527 ttcccccatccaaacacactct 26534506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 40338191 - 40338303
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||| | |||||||||| | |||||     |||    
T  40338191 aaaatacttcataaatttccatcattttgaaaattctgtaaattattatccaaacaatgaaattcacctcaaagtatttgaattccatcaaa-----aca 40338285  T
Q  110 ttccctcatccaaacaca 127  Q
    ||||||||||||||||||    
T  40338286 ttccctcatccaaacaca 40338303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 42776771 - 42776671
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| | | ||||||||||   |||||||||||||    
T  42776771 aaaatacttcataaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaaattcacctaaaagtatttgaatttactcaaaacattaca 42776672  T
Q  110 t 110  Q
    |    
T  42776671 t 42776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 46242483 - 46242590
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||||| | |||||  ||| ||||||||||||| |    
T  46242483 aaaatacttcataaatttccatcattttgaaaattcttcaaattattctccaaacaatggaattcacctcaaagtattttgattccttcaaaacattata 46242582  T
Q  110 ttccctca 117  Q
    || |||||    
T  46242583 tttcctca 46242590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 17727199 - 17727103
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||| |  |||||||||    
T  17727199 aaaatacttcgtaaatttccataattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 42775739 - 42775643
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||| ||||||||||| | |||||||||| | ||||||||||    
T  42775739 aaaatacttcataaatttccattattttgaaaattatttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 53760729 - 53760825
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||  ||||||| ||| |||||||||||| | ||||||||||    
T  53760729 aaaatacttcataaatttccatcattttaaaaattcttcaaattattatccaaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 1539754 - 1539668
Alignment:
Q  31 tcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||    
T  1539754 tcattttgaaaattctacaaattattatccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctca 1539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 27284601 - 27284684
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||||||||||||||||||||| |||||| ||||||  ||||| ||||||||||||||||||||| | ||||||||||    
T  27284601 aaaatacttcataaatttccatcattttaaaaattattcaaatcattatacaaacaatgaaattcacctcaaagtatttgaatt 27284684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 41139607 - 41139500
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| ||||||||| |||||| || ||| |||||||||||||||  ||||||||| | | |||||||||| | |||||||||||||    
T  41139607 aaaatacttcataaattttcatcattttaaaaattctttaaattattatccaaacaatagaattcacctaaaagtatttgaatttcctcaaaacattaca 41139508  T
Q  110 ttccctca 117  Q
    || |||||    
T  41139507 ttacctca 41139500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 52294986 - 52295080
Alignment:
Q  12 aatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||  |||| |||||||||||| | || |||||||    
T  52294986 aatacttcataaattctcatcattttgaaaattcttcaaattattatccaaacaatgaaattcgtctcaaaatatttgaattccctcgaaacatt 52295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 16300157 - 16300282
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttt-tcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattac 108  Q
    |||||||||||||||||| ||||||||  |||| ||| | ||| | ||||| |||||||| ||||||||||| | ||||||||||   ||||||||||||    
T  16300157 aaaatacttcataaattttcatcatttgaaaaaatttctgaaattgttatcaaaacaatggaattcacctcaaagtatttgaattttctcaaaacattac 16300256  T
Q  109 attccctcatccaaacacactcttaa 134  Q
    ||||  ||||||||||||||||||||    
T  16300257 attcattcatccaaacacactcttaa 16300282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 16516306 - 16516202
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactatt-atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattac 108  Q
    |||||||||||||||||| |||||||||||||||| |||||| | || |||||||||||| | ||||| ||| | ||||| |||| ||||||||||||||    
T  16516306 aaaatacttcataaattttcatcattttgaaaattcttcaaattcttaatccaaacaatggagttcacatcaaagtatttaaattccttcaaaacattac 16516207  T
Q  109 attcc 113  Q
    |||||    
T  16516206 attcc 16516202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 31947725 - 31947644
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||||  ||||||||||    
T  31947725 aaaatacttcgtaaatttctatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcag--tatttgaatt 31947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 40548157 - 40548253
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||| ||| |||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | ||||||||||    
T  40548157 aaaatatttcctaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacatt 40548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 10354476 - 10354369
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||   ||||||||||  ||||||| ||||   |||||||||||||    
T  10354476 aaaatacttcataaattcccatcattttgaaaattcttcaaattattatccaaataagagaattcacctccaaatatttcaattttctcaaaacattaca 10354377  T
Q  110 ttccctca 117  Q
    || |||||    
T  10354376 ttacctca 10354369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 46243036 - 46243130
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||| |||| |||||| ||||||||||||   ||||||||||    
T  46243036 aaaatacttcttaaatttccatcattttgaaaattctttaaattattatccaaacaatggaatt-acctca-aatatttgaattctctcaaaacatt 46243130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 42776182 - 42776249
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacc 77  Q
    ||||||||||||||||||| ||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  42776182 aaaatacttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcacc 42776249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 56118569 - 56118652
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||| |||||||||||  |||||||||||| |||||| |||||| ||||||||||||||||||||| || |||| ||||    
T  56118569 aaaatactttataaatttccactattttgaaaattattcaaattattattcaaacaatgaaattcacctcaaaacatttaaatt 56118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 13318598 - 13318664
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcac 76  Q
    |||||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  13318598 aaaatacttcataagtttctatcattttgaaaattcttcaaattattatccaaacaataaaattcac 13318664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 4490161 - 4490096
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattca 75  Q
    ||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||    
T  4490161 aaaatacatcataaatttccatcattttgaaaattctttaaattattatccaaacaataaaattca 4490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 10633119 - 10633059
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  10633119 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctca 10633059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 857323 - 857250
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactctta 133  Q
    ||||||||  ||||||||| | | || ||||||| | ||||||||||||||||||||||||||||||| |||||    
T  857323 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcatccaaacacattctta 857250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 52494061 - 52493958
Alignment:
Q  6 gaagaaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacat 105  Q
    |||||||||||||||||| |||||||| |||| |||||| |  ||| ||| |||||||||| ||||||||||| | ||||||| |||| | || ||||||    
T  52494061 gaagaaaatacttcataa-tttccatccttttaaaaattctcaaaattatcatccaaacaacgaaattcacctaaaaatattttaattccctc-aaacat 52493964  T
Q  106 tacatt 111  Q
    ||||||    
T  52493963 tacatt 52493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 31473936 - 31473876
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||| |||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  31473936 atccaaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctca 31473876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 41498574 - 41498622
Alignment:
Q  69 aaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  41498574 aaattcacctcaaaataattgaattccttcaaaacattacattccctca 41498622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 47108414 - 47108350
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattc 74  Q
    |||||||||||||||||| |||| |||| |||||| |||||| | ||||| ||||||||||||||    
T  47108414 aaaatacttcataaattttcatcgttttaaaaattcttcaaattgttatctaaacaatgaaattc 47108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 54566309 - 54566252
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaat 67  Q
    ||||||||||||||||||| |||||||| ||||  ||||||| |||||| ||||||||    
T  54566309 aaaatacttcataaatttcgatcattttaaaaaaatttcaaattattattcaaacaat 54566252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 19461677 - 19461776
Alignment:
Q  12 aatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacatt 111  Q
    |||| ||||||||||||||||||| | |||||| | || | |||||||||||||||  |||| |  ||| | ||||||||||   |||||||||||||||    
T  19461677 aataattcataaatttccatcattctaaaaattctccatattattatccaaacaatagaatttatatcaaattatttgaattcgctcaaaacattacatt 19461776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 30303855 - 30303800
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaaca 65  Q
    |||||||||||||||||| ||| |||||||||||| ||||||  || |||||||||    
T  30303855 aaaatacttcataaattttcattattttgaaaattcttcaaaaaatcatccaaaca 30303800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 49111397 - 49111444
Alignment:
Q  70 aattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  49111397 aattcacctcaaaatagttgaattccctcaaaacattacattccctca 49111444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 7352896 - 7352839
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||| | |||| ||||||| | |||||||||||||||||||||    
T  7352896 caaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctca 7352839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 24062904 - 24062871
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatt 44  Q
    |||||||||| |||||||||||||||||||||||    
T  24062904 aaatacttcacaaatttccatcattttgaaaatt 24062871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 24705485 - 24705432
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaa 63  Q
    |||||| |||||||||||| |||||||| |||||| |||||| |||||| ||||    
T  24705485 aaaatatttcataaatttctatcattttaaaaattcttcaaattattattcaaa 24705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 29686015 - 29686072
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaat 67  Q
    ||||||||| |||||||||||||||||||||||   |||||| ||| ||| |||||||    
T  29686015 aaaatactttataaatttccatcattttgaaaaaaattcaaattatcatctaaacaat 29686072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 42844627 - 42844570
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| |||||||| ||||||||||||||    
T  42844627 caaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctca 42844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 24045094 - 24044987
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  24045094 aaaatacttcataaatttccatcattttgaaaattcttcaaactattacccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattaca 24044995  T
Q  110 ttccctca 117  Q
    ||||||||    
T  24044994 ttccctca 24044987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 28324611 - 28324718
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||   |||||||||| |||||||||||||||    
T  28324611 aaaatacctcataaatttccatcattttgaaaattcttcaaactattatccaaacaatgtaattcagctcaaggtatttgaattccttcaaaacattaca 28324710  T
Q  110 ttccctca 117  Q
    ||||||||    
T  28324711 ttccctca 28324718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 31976531 - 31976632
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||| | ||||| |||||||    
T  31976531 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatgaaattcatctcaaaatatttgaatttcctcaaagcattaca 31976630  T
Q  110 tt 111  Q
    ||    
T  31976631 tt 31976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 8049388 - 8049281
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |||||| | |||||||||| | ||||||||||| |    
T  8049388 aaaatacttcataaatttcaatcattttgaaaattcttcaaattattatccaaacaatgaaatttacctcaaagtatttgaattccctcaaaacattata 8049289  T
Q  110 ttccctca 117  Q
    ||||||||    
T  8049288 ttccctca 8049281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 26520388 - 26520501
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| | |||||||||| | |||||     |||    
T  26520388 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaa-----aca 26520482  T
Q  110 ttccctcatccaaacacac 128  Q
    |||||||||||||||||||    
T  26520483 ttccctcatccaaacacac 26520501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 33986138 - 33986037
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| | ||||||||||   |||||||||||||    
T  33986138 aaaatacttcatgaatttccatcattttgaaaattcttcaaattattatctaaacaatgaaattcacctcaaagtatttgaattctctcaaaacattaca 33986039  T
Q  110 tt 111  Q
    ||    
T  33986038 tt 33986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 34008915 - 34008799
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||| | |||||||||| | |||||     |||    
T  34008915 aaaatacttcataaatttccatcattttgaaaattctttaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcaaa-----aca 34008821  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||| ||||||||||||||||    
T  34008820 ttcccccatccaaacacactct 34008799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 14369 - 14266
Alignment:
Q  13 atacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattc 112  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||| || | |||||||||| | | ||||||||||||||    
T  14369 atacttcataaatttccatcattttgaaaatacttcaaattattatctaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattc 14270  T
Q  113 cctc 116  Q
    ||||    
T  14269 cctc 14266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 29257300 - 29257407
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  29257300 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 29257399  T
Q  110 ttccctca 117  Q
    ||||||||    
T  29257400 ttccctca 29257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 29482756 - 29482863
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| |||     
T  29482756 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacg 29482855  T
Q  110 ttccctca 117  Q
    ||||||||    
T  29482856 ttccctca 29482863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 44346627 - 44346734
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  44346627 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 44346726  T
Q  110 ttccctca 117  Q
    ||||||||    
T  44346727 ttccctca 44346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 6416318 - 6416200
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| ||| | |||||||||  ||||||| ||  | |    
T  6416318 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatcaaaacaatggaattcacttcaaagtatttgaatcccttcaaatcaaaata 6416219  T
Q  110 ttccctcatccaaacacac 128  Q
    || ||||||||||||||||    
T  6416218 tttcctcatccaaacacac 6416200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 13144717 - 13144616
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||| ||||||||||| | |||||||||| | ||| |||||||||    
T  13144717 aaaatacttcataaattctcatcattttgaaaattcttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcataacattaca 13144618  T
Q  110 tt 111  Q
    ||    
T  13144617 tt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 31980432 - 31980533
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||| || |||||||||||| | | |||||||||||    
T  31980432 aaaatacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattaca 31980531  T
Q  110 tt 111  Q
    ||    
T  31980532 tt 31980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 33377246 - 33377353
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| || |    
T  33377246 aaaatacttcgtaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatata 33377345  T
Q  110 ttccctca 117  Q
    ||||||||    
T  33377346 ttccctca 33377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 44889488 - 44889381
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| ||||||| |||||||| | |||| |||||||||||||||| ||||||| ||| | |||||||||| | ||||||||||| |    
T  44889488 aaaatacttcataaattttcatcattatgaaaattctacaaattattatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattata 44889389  T
Q  110 ttccctca 117  Q
    ||||||||    
T  44889388 ttccctca 44889381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 9982770 - 9982669
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| ||||||||| |||||| |||||| ||||||| |||||||| ||||||||||| ||||||| ||||   |||||||||||||    
T  9982770 aaaatacttcataaattttcatcattttaaaaattcttcaaattattatctaaacaatggaattcacctcaaaatatttaaattctctcaaaacattaca 9982671  T
Q  110 tt 111  Q
    ||    
T  9982670 tt 9982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 1088226 - 1088333
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||  || ||| |||||||||||||||| |||| ||| || |||||||||||| | |||||||| ||||    
T  1088226 aaaatacttcataaatttctatcattttgaaaatgcttgaaattattatccaaacaatggaatttaccccaaaatatttgaatttcctcaaaacaataca 1088325  T
Q  110 ttccctca 117  Q
    ||| ||||    
T  1088326 ttctctca 1088333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 29611485 - 29611388
Alignment:
Q  29 catcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacac 128  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||| | |||||     |||||||| |||||||||||||    
T  29611485 catcattttgaaaattcttcaaattattatccaaacaatgaaattcacctcaaagtatttgaattccctcaaa-----acattcccccatccaaacacac 29611391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 36625174 - 36625293
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||| | ||||| ||  |||| ||||||| | |||||     | |    
T  36625174 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatctaaacaatggatttcacatcgaaataattgaattccctcaaa-----ata 36625268  T
Q  110 ttccctcatccaaacacactcttaa 134  Q
    |||| ||||||||||||||||||||    
T  36625269 ttccttcatccaaacacactcttaa 36625293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 34388641 - 34388561
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaa 91  Q
    |||||||||||||||||||||||||||| ||| || || ||| |||||||||||||||| ||||||||||| ||||||||||    
T  34388641 aaaatacttcataaatttccatcattttaaaagttctttaaattattatccaaacaatggaattcacctca-aatatttgaa 34388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 35978956 - 35979060
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| |||||||||| |||   ||||||| |||||||||||||||| ||||||||||| | |||||||||| | ||  || ||||||    
T  35978956 aaaatacttcataaattcccatcattttaaaa---tttcaaattattatccaaacaatggaattcacctcaaagtatttgaattccctcttaagattaca 35979052  T
Q  110 ttccctca 117  Q
    ||||||||    
T  35979053 ttccctca 35979060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 43167675 - 43167768
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaac 103  Q
    |||||||||||||||||| || ||||||||||||| |||||| ||||||| ||||||  |||||||||||| | |||||||||| ||| |||||    
T  43167675 aaaatacttcataaattttcaacattttgaaaattcttcaaattattatctaaacaactaaattcacctcaaagtatttgaattcctttaaaac 43167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24510226 - 24510322
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||| | ||||||||| |||| || |||  | ||||||||||    
T  24510226 aaaatacttcataaatttccatcattttaaaaattcttcaaattattattcaaacaatggagttcacctcaaaatacttaaatcccctcaaaacatt 24510322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 35404691 - 35404797
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| |||||||| |||| | ||  || ||||||||||||| | |||||||||||| | |||||||||| | |||||| ||||||    
T  35404691 aaaatacttcataaatttctatcattttaaaaactcttggaattattatccaaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattaca 35404790  T
Q  110 ttccctc 116  Q
    || ||||    
T  35404791 ttacctc 35404797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 40734050 - 40734115
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattca 75  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||| ||||||    
T  40734050 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcaaaacaatggaattca 40734115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 7079464 - 7079394
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    |||||||||| ||||||| |||| ||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  7079464 aaaatacttcttaaattttcatcgttttgaaaattctttaaattattatccaaacaatgaaatttacctca 7079394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 21465569 - 21465647
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactcttaag 135  Q
    |||||||||||| |||| |||||| | |||||||||| | ||  || ||||||||||||||||||||||||||||||||    
T  21465569 atccaaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctcatccaaacacactcttaag 21465647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 15186766 - 15186867
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||||| |||||||||| ||  || ||| | |||||||||  ||||||||| | | ||||||||||   |||||||||||||    
T  15186766 aaaatacttcataaatttccatcaatttgaaaattcttttaattatcacccaaacaatagaattcaccttaaactatttgaatttactcaaaacattaca 15186865  T
Q  110 tt 111  Q
    ||    
T  15186866 tt 15186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 8469629 - 8469514
Alignment:
Q  12 aatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacatt 111  Q
    |||||||||| ||||| |||||||||||||||| |  ||| |||||||||||||||| ||||||||| | |  | ||||||| | |||||     |||||    
T  8469629 aatacttcatgaattttcatcattttgaaaattatctaaattattatccaaacaatggaattcacctaataggacttgaattccctcaaa-----acatt 8469535  T
Q  112 ccctcatccaaacacactctt 132  Q
    ||||| |||||||||||||||    
T  8469534 ccctcgtccaaacacactctt 8469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 23011821 - 23011761
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  23011821 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 23011761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 10593205 - 10593147
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatg 68  Q
    |||||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||    
T  10593205 aaaatatttcataaagtttaatcattttgaaaattcttcaaattattatccaaacaatg 10593147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 15718331 - 15718230
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||| |||| ||||||| |||||||||||||| | |||||| ||  ||||||| |||||| ||| ||| | ||||||||||||   | |||||||||||    
T  15718331 aaaatccttcctaaattttcatcattttgaaaactcttcaaattaacatccaaaaaatgaagttcgccttaaaatatttgaattcactaaaaacattaca 15718232  T
Q  110 tt 111  Q
    ||    
T  15718231 tt 15718230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 38573470 - 38573543
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactctta 133  Q
    ||||||||  |||||| |||| | || ||||||| | |||||||| ||||||||| ||||||||||||||||||    
T  38573470 caaacaatagaattcaactcaaagtagttgaatttcctcaaaacactacattcccccatccaaacacactctta 38573543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 36103188 - 36103128
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||| ||| | |||||||||| | | |||||||||||||||||||    
T  36103188 atccaaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctca 36103128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 33422954 - 33423017
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaatt 73  Q
    |||||| ||||||||||| || |||||| |||| |||||||| ||| ||| |||||||||||||    
T  33422954 aaaatagttcataaatttacaccattttaaaaaattttcaaattatcatctaaacaatgaaatt 33423017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 3853700 - 3853643
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  3853700 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctca 3853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 3858158 - 3858101
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  3858158 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctca 3858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 6460835 - 6460876
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaa 51  Q
    |||||| ||||||||||||||||||||||||| || ||||||    
T  6460835 aaaataattcataaatttccatcattttgaaatttcttcaaa 6460876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 13404902 - 13404959
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||| ||||||| |||| | || ||||||| | |||||||||||||||||||||    
T  13404902 caaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctca 13404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 30444929 - 30444978
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||| ||||||||||| | |||||||||| | ||||||||||    
T  30444929 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 515528 - 515584
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattcc 113  Q
    |||||||||||||||||||| ||| | |||||||| | | | |||||||||||||||    
T  515528 atccaaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattcc 515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 28190695 - 28190735
Alignment:
Q  53 tattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||||||||  ||||||||||| ||||||||||||    
T  28190695 tattatccaaacaattgaattcacctcaaaatatttgaatt 28190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 9697596 - 9697474
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||| ||| | |||||||||| ||||||||||| |||    
T  9697596 aaaatacttcataaattttcatcattttgaaaattcatcaaactattatccaaacaatggaattcacatcaaagtatttgaattccttcaaaacatcaca 9697497  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||||||||| ||||||||||||    
T  9697496 ttccctcatcc-aacacactctta 9697474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 28918298 - 28918192
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    ||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||||||||| | | ||||||||||||    
T  28918298 aaatatttcataaatttccatcattttgaaaatccttcaaattattatccaaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacat 28918199  T
Q  111 tccctca 117  Q
    |||||||    
T  28918198 tccctca 28918192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 31413034 - 31412929
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||  ||| | |||||||||| | ||||||||| | ||    
T  31413034 aaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcatatcaaagtatttgaattccctcaaaacatcatat 31412935  T
Q  111 tccctc 116  Q
    ||||||    
T  31412934 tccctc 31412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 1195467 - 1195349
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||| ||||||||||| | |||||||| | | |||||     |||    
T  1195467 aaaatacttcataaatttccataattttgaaaattcttcaaattattatctaaacaatggaattcacctcaaagtatttgaaatccctcaaa-----aca 1195373  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| ||||||||||||||||||    
T  1195372 ttcccccatccaaacacactctta 1195349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 8475295 - 8475177
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||  | | |||||||||| | ||||||||||       
T  8475295 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcacccaaaagtatttgaattccctcaaaacatt--- 8475199  T
Q  110 ttccctcatccaaacacactctta 133  Q
     |||| ||||||||||||||||||    
T  8475198 -tccc-catccaaacacactctta 8475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 1368610 - 1368504
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    ||||| |||||||||||||||||||||||||||  |||| | |||||||||||||||  ||||||||||| || ||||||||| | | |||| |||||||    
T  1368610 aaatatttcataaatttccatcattttgaaaatccttcatattattatccaaacaatagaattcacctcaaaacatttgaattcccttaaaatattacat 1368511  T
Q  111 tccctca 117  Q
    || ||||    
T  1368510 tctctca 1368504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 34364830 - 34364754
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactctta 133  Q
    |||||||||||| ||||||||||| | ||||| |||| | ||| |||||||||||||||||||||||||||||||||    
T  34364830 atccaaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctcatccaaacacactctta 34364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 15616300 - 15616383
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    |||||||||||||||||| ||||||||| |||||| || ||| |||||||||||||||  ||||||||||| ||||||| ||||    
T  15616300 aaaatacttcataaatttgcatcattttaaaaattctttaaattattatccaaacaatagaattcacctcaaaatatttaaatt 15616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 26901703 - 26901804
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| |||||||| |||||| |  ||| |||  ||| ||||||||||||||||| | | |||||||||| | |||||| ||||||    
T  26901703 aaaatacttcataaatttctatcattttaaaaattctcaaaattatcctccgaacaatgaaattcacctaaaattatttgaattccctcaaaatattaca 26901802  T
Q  110 tt 111  Q
    ||    
T  26901803 tt 26901804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 6358190 - 6358297
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||| ||| |||||||||||| |||||||||||| |||||| |||||| | ||||||  |||||||| || | ||||| ||||   |||||||||||||    
T  6358190 aaaatgcttaataaatttccattattttgaaaattcttcaaattattattctaacaatagaattcaccacaaagtatttaaattctctcaaaacattaca 6358289  T
Q  110 ttccctca 117  Q
    || |||||    
T  6358290 ttacctca 6358297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 15832576 - 15832497
Alignment:
Q  34 ttttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattcc 113  Q
    ||||||||||  |||||| || |||||||||||||||||||||| || | |||||||||| | | |||||||||||||||    
T  15832576 ttttgaaaatacttcaaattagtatccaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattcc 15832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 13487362 - 13487302
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||||||||||||||| | |||||||||| | ||| |||| ||||||||||||    
T  13487362 atccaaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctca 13487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 10105173 - 10105118
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaaca 65  Q
    ||||||||||||| |||||||||||||| |||||  |||||| |||||||||||||    
T  10105173 aaaatacttcatacatttccatcattttaaaaatgcttcaaattattatccaaaca 10105118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 29395458 - 29395521
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaatt 73  Q
    |||||||||| ||||| |||||||||||||||||| | |||| ||| |||||| ||||||||||    
T  29395458 aaaatacttcgtaaatctccatcattttgaaaattctccaaattatcatccaaccaatgaaatt 29395521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 10737668 - 10737726
Alignment:
Q  20 ataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacct 78  Q
    ||||||||| ||||||||||||||| | |||||||| ||| ||||||||||||| ||||    
T  10737668 ataaatttctatcattttgaaaattctccaaactatcatcaaaacaatgaaatttacct 10737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 15299509 - 15299557
Alignment:
Q  69 aaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| | || ||||||| |||||||||||||||||||||||    
T  15299509 aaattcacctcaaagtagttgaattccttcaaaacattacattccctca 15299557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 34244966 - 34245026
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| |||| || ||| | |||||||||| | |||||||||||||||||||||    
T  34244966 atccaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctca 34245026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 413613 - 413683
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctca 80  Q
    |||||| || |||||||| ||| ||||| |||||| |||||| ||||||  ||| ||||||||||||||||    
T  413613 aaaatattttataaattttcattattttaaaaattattcaaattattataaaaaaaatgaaattcacctca 413683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 9763096 - 9763039
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  9763096 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 9763039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 29889420 - 29889476
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattcc 113  Q
    ||||||| |||| ||||||| ||| | |||||||||| | |||||||||||||||||    
T  29889420 atccaaataatggaattcacatcaaagtatttgaattccctcaaaacattacattcc 29889476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 4437 - 4544
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || |||||||||||| | ||||||||||| |    
T  4437 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattata 4536  T
Q  110 ttccctca 117  Q
    ||||||||    
T  4537 ttccctca 4544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 5081 - 5188
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || |||||||||||| | ||||||||||| |    
T  5081 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattata 5180  T
Q  110 ttccctca 117  Q
    ||||||||    
T  5181 ttccctca 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 4209 - 4102
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||||| | |||||||||| | |||||||||||||    
T  4209 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacctcaaagtatttgaattccctcaaaacattaca 4110  T
Q  110 ttccctca 117  Q
    ||| ||||    
T  4109 ttctctca 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 3000 - 2899
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||    
T  3000 aaaatatttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctca-aatatttgaattccctcaaaacattaca 2902  T
Q  110 ttc 112  Q
    |||    
T  2901 ttc 2899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 32650707 - 32650611
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| | |||||||||| | ||||||||||    
T  32650707 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 23455172 - 23455279
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  23455172 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 23455271  T
Q  110 ttccctca 117  Q
    ||||||||    
T  23455272 ttccctca 23455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 28539093 - 28539200
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  28539093 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaataca 28539192  T
Q  110 ttccctca 117  Q
    ||||||||    
T  28539193 ttccctca 28539200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 30524389 - 30524286
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| | || | |||||||||| | |||||||||||||    
T  30524389 aaaatacttcataaatttccatcattttaaaaatatttcaaattattatccaaacaatgaaattcatcccaaagtatttgaattccctcaaaacattaca 30524290  T
Q  110 ttcc 113  Q
    ||||    
T  30524289 ttcc 30524286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 43791223 - 43791117
Alignment:
Q  11 aaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacat 110  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| | |||||||||| | ||||||||||||||    
T  43791223 aaatacttattaaatttccatcattttgaaaattcttcaaattattatccaaacaatggagttcacctcaaagtatttgaattccctcaaaacattacat 43791124  T
Q  111 tccctca 117  Q
    |||||||    
T  43791123 tccctca 43791117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 19865479 - 19865595
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||| ||||||||||||||||| || ||| ||||||| |||||||||||||||||||| | |||||||||| | |||||     |||    
T  19865479 aaaatacttcataaattaccatcattttgaaaattctttaaattattatcaaaacaatgaaattcacctcaaagtatttgaatttcctcaaa-----aca 19865573  T
Q  110 ttccctcatccaaacacactct 131  Q
    ||||||||||||||||||||||    
T  19865574 ttccctcatccaaacacactct 19865595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 9784856 - 9784963
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| | |||||| || | |||||||||| | |||||||| ||||    
T  9784856 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggatttcaccccaaagtatttgaattccctcaaaacaataca 9784955  T
Q  110 ttccctca 117  Q
    ||||||||    
T  9784956 ttccctca 9784963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 22391513 - 22391619
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||| |||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||| ||||||| ||||   |||||||||||||    
T  22391513 aaaatacttcagaaatttccatcatttt-aaaattctttaaattattatccaaacaatgaaattcacctcaaaatatttaaattctctcaaaacattaca 22391611  T
Q  110 ttccctca 117  Q
    ||||||||    
T  22391612 ttccctca 22391619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 23548536 - 23548643
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||| ||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | |||||||| ||||    
T  23548536 aaaatacttcataaatttctatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacaataca 23548635  T
Q  110 ttccctca 117  Q
    ||||||||    
T  23548636 ttccctca 23548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 25189151 - 25189258
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||| | |||||||||| | |||||||||| ||    
T  25189151 aaaatacttcgtaaatttccatcattttgaaaattcttcaaattatcatccaaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgca 25189250  T
Q  110 ttccctca 117  Q
    || |||||    
T  25189251 ttacctca 25189258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 39342567 - 39342674
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||||||| || | |||||||||| | | |||||| ||||    
T  39342567 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaataca 39342666  T
Q  110 ttccctca 117  Q
    ||||||||    
T  39342667 ttccctca 39342674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 13814919 - 13815015
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||| ||| | |||||||||| | ||||||||||    
T  13814919 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaataatggaattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 26416087 - 26415991
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| | ||||||||||  || ||||||||    
T  26416087 aaaatacttcctaaatttccatcattttgaaaattcttcaaattattatccaaaccatgaaattcacctcaaagtatttgaattcttttaaaacatt 26415991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30587828 - 30587943
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| | | | |||||||||| | ||||||||||       
T  30587828 aaaatacttcataaatttccatcattttgaaaatacttcaaactattatccaaacaatggaattcacattaaagtatttgaattccctcaaaacatt--- 30587924  T
Q  110 ttccctcatccaaacacactc 130  Q
      ||| |||||||||||||||    
T  30587925 --cccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 40495851 - 40495755
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    |||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||| |||||||| || |||||||||||| | ||||||||||    
T  40495851 aaaatacttcataaatttccatcattttaaaaatgcttcaaattattatccaaacaatggaattcaccccaaaatatttgaattccctcaaaacatt 40495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 45984474 - 45984378
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||||| | |||||||||| | | ||||||||    
T  45984474 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 45988834 - 45988738
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||||| | |||||||||| | | ||||||||    
T  45988834 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 14603187 - 14603294
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||| ||| || | |||||||||| | | |||||| ||||    
T  14603187 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaataca 14603286  T
Q  110 ttccctca 117  Q
    ||||||||    
T  14603287 ttccctca 14603294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 30080726 - 30080844
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||| | | ||||| |||| | |||||     |||    
T  30080726 aaaatacttcataaatttccatcattttgaaaattcttcaaattatcatccaaacaatggaattcacctgaaagtatttaaatttcctcaaa-----aca 30080820  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| ||||||||||||||||||    
T  30080821 ttcccccatccaaacacactctta 30080844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 30629191 - 30629084
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| || | ||||| ||||   | |||||| ||||    
T  30629191 aaaatacttcataaatttccatcattttgaaaatccttcaaattattatccaaacaatgaaattcaccccaaagtatttaaattctcttaaaacaataca 30629092  T
Q  110 ttccctca 117  Q
    ||||||||    
T  30629091 ttccctca 30629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 35455938 - 35455831
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||| ||| || | |||||||||| | | |||||| ||||    
T  35455938 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaataca 35455839  T
Q  110 ttccctca 117  Q
    ||||||||    
T  35455838 ttccctca 35455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 3905584 - 3905681
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatta 107  Q
    |||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||  ||||||||||| | |||||||||| ||| |||||||||    
T  3905584 aaaataattcataaattttcatcattttgaaaattcttcaaattattatccaaacaatagaattcacctcaaagtatttgaattccttgaaaacatta 3905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 40667475 - 40667379
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | || | ||||| |||| | ||||||||||    
T  40667475 aaaatacttcataaatttccatcattttgaaaatgcttcaaattattatccaaacaatgaaattcatcccaaagtatttaaattccctcaaaacatt 40667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 40495364 - 40495281
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| ||| | ||||||||||    
T  40495364 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatccaaacaatagaattcacatcaaagtatttgaatt 40495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 18926746 - 18926811
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattca 75  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  18926746 aaaatacttcataaatttccatcattttgaaattttttcaaattatcatccaaacaatgaaattca 18926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 15991025 - 15990918
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||  |  ||| ||| |||||||||||| |||| | |||| | |||||||||| |||||| ||||||||    
T  15991025 aaaatacttcataaatttccatcattttgaaaatactctaaattatcatccaaacaatgcaatttatctcaaagtatttgaattccttcaagacattaca 15990926  T
Q  110 ttccctca 117  Q
    || |||||    
T  15990925 ttacctca 15990918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14790247 - 14790151
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacatt 106  Q
    ||||||||| |||||||| ||||||||| |||||| || ||| ||||||||||| ||| |||||||||||| | |||||||||| | ||||||||||    
T  14790247 aaaatactttataaattttcatcattttaaaaattctttaaattattatccaaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 42816683 - 42816616
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacc 77  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||| ||||||||    
T  42816683 aaaatacttcataaattttcatcattttgaaaatgcttcaaattattatccaaacaatggaattcacc 42816616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 18789189 - 18789278
Alignment:
Q  28 ccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||| | | |||||||||| | ||| ||||||| |||| ||||    
T  18789189 ccatcattttgaaaattcttcaaattattatccaaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctca 18789278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 36328721 - 36328789
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacct 78  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||  |||||||||    
T  36328721 aaaatacttcataaattaccatcattttgaaaattcttcaaattattatccaaataatagaattcacct 36328789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 18789633 - 18789543
Alignment:
Q  28 ccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcat 118  Q
    |||||||||| |||||| |||||| ||||||| |||||||| ||||||||||| | |||||||||| | ||  |||||||||||| |||||    
T  18789633 ccatcattttaaaaattcttcaaattattatctaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctcat 18789543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 41443025 - 41443091
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcac 76  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||  |||||||    
T  41443025 aaaatactttataaatttccatcattttgaaaattcttcaaattattatccaaagaatataattcac 41443091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 46069475 - 46069402
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactctta 133  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||| ||||||||||||||||||    
T  46069475 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcccccatccaaacacactctta 46069402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 29639187 - 29639245
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccct 115  Q
    |||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||    
T  29639187 atccaaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccct 29639245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 26162109 - 26162169
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    |||||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  26162109 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 26162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 33310938 - 33310882
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaa 66  Q
    ||||||||||||||||||||||||||||||||| | | |||| || |||||||||||    
T  33310938 aaaatacttcataaatttccatcattttgaaaactctacaaattactatccaaacaa 33310882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 31632806 - 31632749
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  31632806 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 31632749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 6498737 - 6498797
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||||||  |||||| ||| | |||||||||| | |||||||||||||||||||||    
T  6498737 atccaaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctca 6498797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 35776927 - 35776987
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||| |||| ||||||||||| | |||||||||| | ||| |||||||||||||||||    
T  35776927 atccaaataatggaattcacctcaaagtatttgaattccctcataacattacattccctca 35776987  T

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Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 45967081 - 45967013
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacct 78  Q
    |||||| ||||||||||| ||||||||| |||||| |  ||| ||| ||||||||||| ||||||||||    
T  45967081 aaaatatttcataaattttcatcattttaaaaattctcaaaattatcatccaaacaataaaattcacct 45967013  T

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Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 44915270 - 44915340
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactc 130  Q
    ||||||||  ||||||||| ||| || ||||||| | ||||||||||| |||||| ||||| |||||||||    
T  44915270 caaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattcccccatcctaacacactc 44915340  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 5644761 - 5644704
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  5644761 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 5644704  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 26780215 - 26780256
Alignment:
Q  85 atttgaattacttcaaaacattacattccctcatccaaacac 126  Q
    |||| ||||||||||||| || ||||||||||||||||||||    
T  26780215 atttcaattacttcaaaaaatcacattccctcatccaaacac 26780256  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 29065903 - 29065846
Alignment:
Q  60 caaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctca 117  Q
    ||||||||  ||||||||||| | || ||||||| | |||||||||||||||||||||    
T  29065903 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 29065846  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 18938937 - 18938969
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaa 42  Q
    ||||||||||||||||||| |||||||||||||    
T  18938937 aaaatacttcataaatttctatcattttgaaaa 18938969  T

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Target: scaffold0129 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 19324 - 19225
Alignment:
Q  17 ttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccctc 116  Q
    ||||||||||||||||||||| |||||| |||||| ||||||| |||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||    
T  19324 ttcataaatttccatcatttttaaaattcttcaaattattatcgaaacaatggaattcacctcaaaatatttgaatt-cctcaaaacattacattccctc 19226  T

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Target: scaffold0129; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 19724 - 19831
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||| ||||||||||| | ||||||||||   | |||||||||||    
T  19724 aaaatacttcataaatttccatcattttgaaaattcttcaaattattatctaaataatgtaattcacctcaaagtatttgaattttcttaaaacattaca 19823  T
Q  110 ttccctca 117  Q
    ||||||||    
T  19824 ttccctca 19831  T

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Target: scaffold0014 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 221135 - 221236
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||| || |||||||||||| | | |||||||||||    
T  221135 aaaatacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattaca 221234  T
Q  110 tt 111  Q
    ||    
T  221235 tt 221236  T

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Target: scaffold0014; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 223688 - 223755
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacc 77  Q
    ||||||||||||||||||||||||||||||||||   ||||| ||||||||||| |||||||||||||    
T  223688 aaaatacttcataaatttccatcattttgaaaatacatcaaattattatccaaataatgaaattcacc 223755  T

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Target: scaffold0301 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 7285 - 7178
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||| |||||||  || | |||||||||| | | |||||| ||||    
T  7285 aaaatacttcgtaaatttccatcattttgaaaatgcttcaaattattatccaaacaatggaattcactccaaagtatttgaattcccttaaaacaataca 7186  T
Q  110 ttccctca 117  Q
    ||||||||    
T  7185 ttccctca 7178  T

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Target: scaffold0337 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 16313 - 16433
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||| |||||||||||||||||| |||||| ||||||  ||||||||||||||| |||| |||||| |||||||||||| | | ||||    |||    
T  16313 aaaatactttataaatttccatcattttaaaaattcttcaaatgattatccaaacaatggaatttacctcaaaatatttgaatttccttaaaa---aaca 16409  T
Q  110 ttccctcatccaaacacactctta 133  Q
    ||||| |||| |||||||||||||    
T  16410 ttcccccatctaaacacactctta 16433  T

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Target: scaffold0337; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 15808 - 15907
Alignment:
Q  13 atacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattc 112  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||  ||||||||||   ||| | ||||||||||    
T  15808 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctaag--tatttgaattctctcatagcattacattc 15905  T

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Target: scaffold0065 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 9525 - 9608
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||| |||| |||||| | ||||||||||    
T  9525 aaaatactttataaatttccatcattttgaaaattcttcaaatgattatccaaacaatggaatttacctcaaagtatttgaatt 9608  T

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Target: scaffold0065; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 2850 - 2949
Alignment:
Q  13 atacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattc 112  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||| ||  ||||||||||   ||| | ||||||||||    
T  2850 atacttcataaattcccatcattttgaaaattcttcaaattattatccaaacaatggaattcacctaag--tatttgaattctctcatagcattacattc 2947  T

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Target: scaffold0039 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 109164 - 109041
Alignment:
Q  10 aaaatacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattaca 109  Q
    ||||||||| ||||||||| ||||||||||||||| |||||| | |||||||||||||| ||||||| ||| | ||||| |||| | |||||     |||    
T  109164 aaaatactttataaatttc-atcattttgaaaattcttcaaattcttatccaaacaatggaattcacatcaaagtatttaaattccctcaaa-----aca 109071  T
Q  110 ttccctcatccaaacacactcttaagattt 139  Q
    ||||| |||||||||||||||| |||||||    
T  109070 ttcccccatccaaacacactctaaagattt 109041  T

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Target: scaffold0047 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 50250 - 50329
Alignment:
Q  14 tacttcataaatttccatcattttgaaaatttttcaaactattatccaaacaatgaaattcacctcagaatatttgaatt 93  Q
    ||||||||||||||||||||||||||||| | |||||| |||||| ||||||||| ||||||| ||| | ||||||||||    
T  50250 tacttcataaatttccatcattttgaaaactcttcaaattattattcaaacaatggaattcacatcaaagtatttgaatt 50329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 56345 - 56284
Alignment:
Q  73 tcacctcagaatatttgaattacttcaaaacattacattccctcatccaaacacactcttaa 134  Q
    |||||||| | || ||||||| | |||||||||||||||||| |||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattcccccatccaaacacactcttaa 56284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 10973 - 10915
Alignment:
Q  57 atccaaacaatgaaattcacctcagaatatttgaattacttcaaaacattacattccct 115  Q
    |||||||||||| ||||||| ||| | |||||||||| | |||||||||||||||||||    
T  10973 atccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccct 10915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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