View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20082_high_28 (Length: 284)

Name: NF20082_high_28
Description: NF20082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20082_high_28
NF20082_high_28
[»] chr8 (28 HSPs)
chr8 (1-272)||(31017605-31017876)
chr8 (179-272)||(11358103-11358196)
chr8 (177-277)||(45068324-45068424)
chr8 (177-272)||(6464484-6464579)
chr8 (177-272)||(7311568-7311663)
chr8 (177-272)||(8013228-8013323)
chr8 (177-272)||(16710576-16710671)
chr8 (177-272)||(26250499-26250594)
chr8 (177-272)||(36005390-36005485)
chr8 (177-272)||(36021707-36021802)
chr8 (177-272)||(36076186-36076281)
chr8 (177-272)||(41242024-41242119)
chr8 (180-272)||(15012607-15012699)
chr8 (180-272)||(36425641-36425733)
chr8 (177-272)||(1238433-1238528)
chr8 (198-272)||(12768963-12769037)
chr8 (96-161)||(24239861-24239926)
chr8 (100-172)||(22314322-22314394)
chr8 (96-173)||(22366242-22366319)
chr8 (100-156)||(20175714-20175770)
chr8 (100-156)||(20220441-20220497)
chr8 (96-172)||(22723424-22723500)
chr8 (104-161)||(16002253-16002309)
chr8 (104-156)||(22497150-22497201)
chr8 (104-156)||(22888016-22888067)
chr8 (110-156)||(18041473-18041518)
chr8 (102-156)||(18118229-18118283)
chr8 (110-156)||(33172488-33172533)
[»] chr6 (32 HSPs)
chr6 (177-272)||(27670313-27670408)
chr6 (177-272)||(4186904-4186999)
chr6 (177-272)||(13671725-13671820)
chr6 (177-272)||(21262482-21262577)
chr6 (177-272)||(31548114-31548209)
chr6 (177-272)||(1428331-1428426)
chr6 (177-272)||(9864668-9864763)
chr6 (177-272)||(11058058-11058153)
chr6 (177-272)||(32328401-32328496)
chr6 (179-272)||(4020145-4020238)
chr6 (179-272)||(4026571-4026664)
chr6 (179-272)||(7062426-7062519)
chr6 (179-272)||(34649019-34649112)
chr6 (179-272)||(34655470-34655563)
chr6 (180-272)||(4738234-4738326)
chr6 (177-272)||(34711465-34711560)
chr6 (179-272)||(7069612-7069705)
chr6 (177-272)||(29907078-29907173)
chr6 (177-272)||(30117207-30117302)
chr6 (100-172)||(17374853-17374923)
chr6 (177-272)||(1167388-1167483)
chr6 (104-161)||(21931459-21931515)
chr6 (104-156)||(16136518-16136569)
chr6 (132-175)||(17856380-17856423)
chr6 (110-161)||(19175412-19175462)
chr6 (107-150)||(22585501-22585543)
chr6 (107-150)||(22590332-22590374)
chr6 (102-156)||(23222169-23222222)
chr6 (114-175)||(18733168-18733229)
chr6 (110-155)||(31467539-31467583)
chr6 (111-156)||(34967129-34967173)
chr6 (104-156)||(23223006-23223057)
[»] chr1 (29 HSPs)
chr1 (177-272)||(26621689-26621784)
chr1 (177-272)||(44916557-44916652)
chr1 (177-272)||(32797942-32798037)
chr1 (177-272)||(4599748-4599843)
chr1 (177-272)||(9869324-9869419)
chr1 (177-272)||(23762244-23762339)
chr1 (177-272)||(29001950-29002045)
chr1 (177-272)||(41299096-41299191)
chr1 (177-272)||(42092115-42092210)
chr1 (177-272)||(43686848-43686943)
chr1 (177-272)||(44241576-44241671)
chr1 (177-272)||(45016000-45016095)
chr1 (179-272)||(39053248-39053341)
chr1 (179-272)||(39059620-39059713)
chr1 (177-272)||(1174825-1174920)
chr1 (177-272)||(6238874-6238969)
chr1 (177-272)||(41297736-41297831)
chr1 (177-272)||(1115890-1115985)
chr1 (178-272)||(11913171-11913265)
chr1 (177-272)||(35085228-35085320)
chr1 (177-272)||(41305427-41305517)
chr1 (177-272)||(31072537-31072632)
chr1 (132-173)||(20822905-20822946)
chr1 (137-173)||(20836714-20836750)
chr1 (114-172)||(18852643-18852700)
chr1 (104-156)||(20194281-20194332)
chr1 (100-154)||(21978023-21978077)
chr1 (103-149)||(25094113-25094158)
chr1 (104-153)||(40436213-40436261)
[»] chr3 (25 HSPs)
chr3 (182-272)||(43931796-43931886)
chr3 (177-272)||(6036485-6036580)
chr3 (177-272)||(9570456-9570551)
chr3 (177-272)||(9576958-9577053)
chr3 (177-272)||(13015205-13015300)
chr3 (177-272)||(20651033-20651128)
chr3 (177-272)||(32746589-32746684)
chr3 (177-272)||(43995297-43995392)
chr3 (179-272)||(24179293-24179386)
chr3 (177-272)||(4311394-4311489)
chr3 (177-272)||(23068683-23068778)
chr3 (177-272)||(25893455-25893550)
chr3 (96-174)||(17758531-17758609)
chr3 (96-174)||(19059851-19059929)
chr3 (179-272)||(27501877-27501970)
chr3 (177-272)||(10941212-10941307)
chr3 (98-175)||(40038852-40038929)
chr3 (100-171)||(17393685-17393756)
chr3 (96-172)||(25103917-25103993)
chr3 (100-161)||(38375632-38375692)
chr3 (111-161)||(11515427-11515476)
chr3 (110-155)||(43427455-43427499)
chr3 (96-141)||(51961093-51961138)
chr3 (100-150)||(11402841-11402890)
chr3 (180-268)||(20952665-20952753)
[»] scaffold0343 (1 HSPs)
scaffold0343 (177-272)||(2864-2959)
[»] chr7 (37 HSPs)
chr7 (177-272)||(3924001-3924096)
chr7 (177-272)||(6020772-6020867)
chr7 (177-272)||(9642824-9642919)
chr7 (177-272)||(14287934-14288029)
chr7 (177-272)||(14299119-14299214)
chr7 (177-272)||(26602131-26602226)
chr7 (177-272)||(1379166-1379261)
chr7 (177-272)||(1948541-1948636)
chr7 (177-272)||(2446865-2446960)
chr7 (177-272)||(5049820-5049915)
chr7 (177-272)||(6795657-6795752)
chr7 (177-272)||(15914857-15914952)
chr7 (177-272)||(23612608-23612703)
chr7 (177-272)||(36875764-36875859)
chr7 (179-272)||(8185302-8185395)
chr7 (179-272)||(8192862-8192955)
chr7 (177-270)||(45433807-45433900)
chr7 (179-272)||(48347006-48347099)
chr7 (179-272)||(48353390-48353483)
chr7 (177-272)||(15949378-15949473)
chr7 (177-272)||(19090027-19090122)
chr7 (177-272)||(33850551-33850646)
chr7 (177-272)||(39433126-39433221)
chr7 (180-272)||(21642737-21642829)
chr7 (177-272)||(8142354-8142449)
chr7 (198-272)||(13774059-13774133)
chr7 (96-175)||(16383930-16384009)
chr7 (215-272)||(37026267-37026324)
chr7 (215-272)||(5056253-5056310)
chr7 (106-172)||(15977773-15977839)
chr7 (100-156)||(44304953-44305009)
chr7 (106-161)||(8563282-8563337)
chr7 (96-173)||(18079421-18079498)
chr7 (96-141)||(25124375-25124420)
chr7 (100-156)||(9723748-9723803)
chr7 (104-156)||(8267669-8267720)
chr7 (132-172)||(21537721-21537761)
[»] chr5 (21 HSPs)
chr5 (177-272)||(2439019-2439114)
chr5 (177-272)||(4973782-4973877)
chr5 (177-272)||(5876437-5876532)
chr5 (177-272)||(22360183-22360278)
chr5 (177-272)||(29980678-29980773)
chr5 (177-272)||(30041152-30041247)
chr5 (177-272)||(34357196-34357291)
chr5 (177-272)||(34358987-34359082)
chr5 (177-272)||(40958525-40958620)
chr5 (179-272)||(2958078-2958171)
chr5 (179-272)||(2966547-2966640)
chr5 (179-272)||(25894559-25894652)
chr5 (177-269)||(42151041-42151133)
chr5 (177-272)||(22314049-22314144)
chr5 (177-272)||(29414577-29414672)
chr5 (177-272)||(12505673-12505768)
chr5 (100-161)||(23417493-23417553)
chr5 (104-156)||(16835240-16835291)
chr5 (104-156)||(19874016-19874067)
chr5 (104-155)||(11763446-11763496)
chr5 (107-147)||(22662632-22662672)
[»] chr4 (23 HSPs)
chr4 (177-272)||(5660457-5660552)
chr4 (177-272)||(30211444-30211539)
chr4 (177-272)||(36754699-36754794)
chr4 (177-272)||(16405565-16405660)
chr4 (177-272)||(30238479-30238574)
chr4 (177-272)||(41373206-41373301)
chr4 (177-272)||(55462680-55462775)
chr4 (179-272)||(17457074-17457167)
chr4 (179-272)||(27590524-27590617)
chr4 (179-268)||(37368225-37368314)
chr4 (179-272)||(13594327-13594420)
chr4 (177-272)||(8104101-8104195)
chr4 (177-272)||(16838267-16838362)
chr4 (98-175)||(15213546-15213623)
chr4 (197-261)||(7780637-7780701)
chr4 (96-161)||(54363229-54363295)
chr4 (96-161)||(17375241-17375305)
chr4 (100-175)||(12133531-12133605)
chr4 (99-161)||(17373007-17373068)
chr4 (100-156)||(13590015-13590070)
chr4 (96-173)||(10237193-10237270)
chr4 (100-154)||(21417558-21417612)
chr4 (110-156)||(50219884-50219929)
[»] chr2 (23 HSPs)
chr2 (177-272)||(15852769-15852864)
chr2 (177-272)||(42931280-42931375)
chr2 (177-272)||(2157831-2157926)
chr2 (177-272)||(2164247-2164342)
chr2 (177-272)||(12951015-12951110)
chr2 (177-272)||(16817238-16817333)
chr2 (177-272)||(16856395-16856490)
chr2 (177-272)||(21331902-21331997)
chr2 (177-272)||(36782092-36782187)
chr2 (179-272)||(45012202-45012295)
chr2 (177-272)||(2021356-2021451)
chr2 (177-272)||(34834720-34834815)
chr2 (177-272)||(34841164-34841259)
chr2 (177-272)||(43268078-43268173)
chr2 (177-272)||(13901865-13901960)
chr2 (177-272)||(21067866-21067961)
chr2 (102-172)||(20279664-20279734)
chr2 (177-226)||(21341834-21341883)
chr2 (231-272)||(45700595-45700636)
chr2 (178-271)||(13163039-13163132)
chr2 (100-161)||(18537007-18537067)
chr2 (236-272)||(29485146-29485182)
chr2 (104-161)||(25595275-25595331)
[»] scaffold0510 (2 HSPs)
scaffold0510 (177-272)||(2468-2563)
scaffold0510 (177-272)||(8789-8884)
[»] scaffold0053 (1 HSPs)
scaffold0053 (177-272)||(49909-50004)
[»] scaffold0043 (1 HSPs)
scaffold0043 (177-272)||(4913-5008)
[»] scaffold0513 (1 HSPs)
scaffold0513 (177-272)||(12152-12247)
[»] scaffold0060 (1 HSPs)
scaffold0060 (177-272)||(15390-15485)
[»] scaffold0936 (1 HSPs)
scaffold0936 (177-272)||(3172-3267)
[»] scaffold0452 (1 HSPs)
scaffold0452 (96-175)||(2708-2787)
[»] scaffold1204 (1 HSPs)
scaffold1204 (98-175)||(13-90)
[»] scaffold0090 (1 HSPs)
scaffold0090 (100-172)||(34382-34454)
[»] scaffold0084 (2 HSPs)
scaffold0084 (100-172)||(55227-55299)
scaffold0084 (100-172)||(2934-3006)
[»] scaffold0032 (1 HSPs)
scaffold0032 (105-172)||(116099-116166)
[»] scaffold0317 (1 HSPs)
scaffold0317 (105-175)||(12524-12594)
[»] scaffold0047 (1 HSPs)
scaffold0047 (100-161)||(19870-19931)
[»] scaffold0049 (1 HSPs)
scaffold0049 (101-161)||(33349-33408)
[»] scaffold0017 (1 HSPs)
scaffold0017 (104-175)||(13021-13092)
[»] scaffold0022 (1 HSPs)
scaffold0022 (100-161)||(67893-67953)
[»] scaffold0013 (1 HSPs)
scaffold0013 (114-161)||(7014-7061)
[»] scaffold0014 (1 HSPs)
scaffold0014 (104-153)||(113969-114017)
[»] scaffold0601 (1 HSPs)
scaffold0601 (104-152)||(825-872)
[»] scaffold0561 (1 HSPs)
scaffold0561 (104-156)||(2713-2764)
[»] scaffold0009 (1 HSPs)
scaffold0009 (132-172)||(244774-244814)


Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 31017876 - 31017605
Alignment:
Q  1 ccttcacttactttgacatgtagttcatttagcagtgcgaatatattggtacactaatatagtaacatgtatgtcagtccaatatttgaactaactcatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||    
T  31017876 ccttcacttactttgacatgtagttcatttagcagtgcgaatatattggtacactaacatagtaacgtgtatgtcagtccaatatttgaactaactcgtc 31017777  T
Q  101 aattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagagtttgagaaatcatcgattaaatgat 200  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  31017776 gattaagttcaaaataatcacttattttaattaagcacttatgcatagaattagggtagaagttacaactaagagttcgagaaatcatcgattaaatgat 31017677  T
Q  201 aagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31017676 aagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgaactcacaatatt 31017605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 11358103 - 11358196
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11358103 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 11358196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 45068324 - 45068424
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatattcttc 276  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    
T  45068324 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgaaacatcgactattgaatggtacaattgatctcacaatattgttc 45068423  T
Q  277 g 277  Q
    |    
T  45068424 g 45068424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 6464484 - 6464579
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6464484 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6464579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 7311663 - 7311568
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7311663 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 7311568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 8013228 - 8013323
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  8013228 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 8013323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 16710576 - 16710671
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16710576 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 16710671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 26250499 - 26250594
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  26250499 ttgaaaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 26250594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36005390 - 36005485
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36005390 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36021707 - 36021802
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36021707 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36021802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 36076281 - 36076186
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36076281 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41242024 - 41242119
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41242024 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 41242119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 15012699 - 15012607
Alignment:
Q  180 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  15012699 agaaatcatcaattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgacttcacaatatt 15012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 36425641 - 36425733
Alignment:
Q  180 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36425641 agaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 36425733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 1238528 - 1238433
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  1238528 ttgagaaatcatctattgaacgataagatcgactcttgaatcattcaatagtttgtgacatcgactattgaatgatacaattgatttcacaatatt 1238433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 12769037 - 12768963
Alignment:
Q  198 gataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12769037 gataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 12768963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 24239861 - 24239926
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24239861 tcattaattaaattcaaaataatcacttatttcaattaagcacttatgcatagaattagggaagaa 24239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 22314322 - 22314394
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||    
T  22314322 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaaagctacaactaa 22314394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 22366242 - 22366319
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 173  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||| |||||||||||||||||||||||||    
T  22366242 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatataattagggtagaagctacaactaag 22366319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 20175770 - 20175714
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  20175770 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 20175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 20220497 - 20220441
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  20220497 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 20220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 22723424 - 22723500
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||| |||||||||||||| |||||||||    
T  22723424 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatataattagggtagaagatacaactaa 22723500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 16002253 - 16002309
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||    
T  16002253 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaatttgggaagaa 16002309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 22497201 - 22497150
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  22497201 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 22497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 22888016 - 22888067
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  22888016 taagtgcaaaataatcacttatt-caaataagcacttatgcataaaattaggg 22888067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 18041518 - 18041473
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  18041518 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 18041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 18118283 - 18118229
Alignment:
Q  102 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||||| |||||||||||||||||| |||||| || | |||| ||||||||    
T  18118283 attaagttcacaataatcacttatttcaaataagcatttttacataaaattaggg 18118229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 33172488 - 33172533
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  33172488 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 33172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 27670408 - 27670313
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27670408 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 4186999 - 4186904
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  4186999 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 4186904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 13671725 - 13671820
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  13671725 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacagttgatttcacaatatt 13671820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 21262482 - 21262577
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21262482 ttgagaaatcatccattaaatgataagaccgactcttgaatcattcaaaagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 21262577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 31548209 - 31548114
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31548209 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 31548114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1428331 - 1428426
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1428331 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 1428426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9864668 - 9864763
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9864668 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattgcacaatatt 9864763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 11058058 - 11058153
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11058058 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 11058153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 32328401 - 32328496
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  32328401 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 32328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 4020145 - 4020238
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4020145 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4020238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 4026571 - 4026664
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4026571 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 7062426 - 7062519
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7062426 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 7062519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 34649112 - 34649019
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34649112 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 34649019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 34655563 - 34655470
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34655563 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 34655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 4738234 - 4738326
Alignment:
Q  180 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4738234 agaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4738326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34711465 - 34711560
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34711465 ttgagaaatcattgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34711560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 7069612 - 7069705
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7069612 gagaaatcatcgattggacgataagatcgactgttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 7069705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 29907173 - 29907078
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||  ||| || ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  29907173 ttgagaaatcatttattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattaaataatacaattgatttcacaatatt 29907078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 30117207 - 30117302
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||  ||| || ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  30117207 ttgagaaatcatttattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattaaataatacaattgatttcacaatatt 30117302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 17374923 - 17374853
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  17374923 caattaagttcataata--cacttatctcaattaagcacttatgcatagaattagggaagaagctacaactaa 17374853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1167388 - 1167483
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||| |||||||||| |||||||||||||||  ||| || |||||||||||||||| |||||  || |||||||||||  ||||||||||    
T  1167388 ttgagaaatcgtcgattaaatcataagatcgactcttggatcgtttaatagtttgagacatcaacgataaaacgatacaattgaattcacaatatt 1167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 21931459 - 21931515
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  21931459 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 21931515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 16136518 - 16136569
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  16136518 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaattaggg 16136569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 17856423 - 17856380
Alignment:
Q  132 taagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||    
T  17856423 taagcacgtatgcatagaattagagaagaagctacaactaagag 17856380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 19175412 - 19175462
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||| ||||    
T  19175412 caaaataatcactt-tttcaaataagcacatatgcatagaattagggaagaa 19175462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 22585543 - 22585501
Alignment:
Q  107 gttcaaaataatcacttatttcaattaagcacttatgcatagaa 150  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  22585543 gttcaaaataatcacttatt-caaataagcacttatgcatagaa 22585501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 22590374 - 22590332
Alignment:
Q  107 gttcaaaataatcacttatttcaattaagcacttatgcatagaa 150  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  22590374 gttcaaaataatcacttatt-caaataagcacttatgcatagaa 22590332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 23222169 - 23222222
Alignment:
Q  102 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||  |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  23222169 attaagtgtaaaataatcacttatt-caattaatcacttatgcatataattaggg 23222222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 18733168 - 18733229
Alignment:
Q  114 ataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||||||   || |||||||||||||| |||||||| | ||||||||||| ||||||    
T  18733168 ataatcacttatccaaaataagcacttatgcaaagaattagagaagaagctacaagtaagag 18733229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 31467583 - 31467539
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattagg 155  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||    
T  31467583 caaaataatcacttatt-caattaagcacttaagcatacaattagg 31467539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 34967129 - 34967173
Alignment:
Q  111 aaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||    
T  34967129 aaaataatcacttatt-caattaagcacttaagcatacaattaggg 34967173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 23223006 - 23223057
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||  |||||||    
T  23223006 taagtgcaaaataatcactta-ttcaaataagcacttatgcatatgattaggg 23223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 26621784 - 26621689
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26621784 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 26621689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 44916652 - 44916557
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44916652 ttgagaaatcatcgattaaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 44916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 32798037 - 32797942
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  32798037 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 32797942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 4599843 - 4599748
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  4599843 ttgagaaatcattgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacagtatt 4599748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 9869419 - 9869324
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9869419 ttgagaaatcatcaattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgatgattgaatgatacaattgatttcacaatatt 9869324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 23762244 - 23762339
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23762244 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 23762339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 29002045 - 29001950
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29002045 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 29001950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41299096 - 41299191
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41299096 ttgagaaatcattgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 41299191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 42092210 - 42092115
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  42092210 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 42092115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43686943 - 43686848
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43686943 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 43686848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 44241671 - 44241576
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  44241671 ttgagaaatcatcgattaaatgataagactgactcttgaatcattcaatagtttgacacatcgacgattgaatgatacaattgatttcacaatatt 44241576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 45016095 - 45016000
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  45016095 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 45016000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 39053248 - 39053341
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39053248 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 39053341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 39059620 - 39059713
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39059620 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 39059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 1174920 - 1174825
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| |  ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1174920 ttgagaaatcatcgattgagcgataagaccgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatctcacaatatt 1174825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 6238969 - 6238874
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6238969 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6238874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 41297831 - 41297736
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  41297831 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 41297736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1115890 - 1115985
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  1115890 ttgagaaatcatcgattgaacgataagaccgactcttgaatcattcaatagtttgagacattgacgatagaatgatacaattgatttcacaatatt 1115985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 11913171 - 11913265
Alignment:
Q  178 tgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||| || |||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  11913171 tgagaaatcttcaattaaatgataagaccgactcttggatcattcaatagtttgaaacatcgacgattgaatgatacaattgatctcgcaatatt 11913265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 35085320 - 35085228
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35085320 ttgagaaatcatcgattaaatgatact---gactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 35085228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41305427 - 41305517
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||| ||||      |||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  41305427 ttgagaaatcatcgattagatgac-----cgactcttgaatcattcaatagtttgagacatcgacgttcgaatgatacaattgatttcacaatatt 41305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 31072632 - 31072537
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||| |  ||| | | ||||||||||| ||||||||||    
T  31072632 ttgagaaatcattgattttatgataagaccgactcttgaatcattcaatagtttgagacatctattatttatttatacaattgatttcacaatatt 31072537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 20822905 - 20822946
Alignment:
Q  132 taagcacttatgcatagaattagggtagaagctacaactaag 173  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  20822905 taagcacttatgcatagaattagggtggaagctacaactaag 20822946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 20836714 - 20836750
Alignment:
Q  137 acttatgcatagaattagggtagaagctacaactaag 173  Q
    |||||||||||||||||||||||||||||||||||||    
T  20836714 acttatgcatagaattagggtagaagctacaactaag 20836750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 18852700 - 18852643
Alignment:
Q  114 ataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||||| ||| |||||||||||||||| | |||||| |||||||||||||||    
T  18852700 ataatcacttatt-caaataagcacttatgcatatatttagggaagaagctacaactaa 18852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20194281 - 20194332
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  20194281 taagtgcaaaataatcatttatt-caaataagcacttatgcatagaattaggg 20194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 21978023 - 21978077
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattag 154  Q
    |||||||| ||| ||||||||||||| |||| |||||| |||||||| |||||||    
T  21978023 caattaagctcacaataatcacttatctcaaataagcatttatgcattgaattag 21978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 25094113 - 25094158
Alignment:
Q  103 ttaagttcaaaataatcacttatttcaattaagcacttatgcataga 149  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  25094113 ttaagtgcaaaataatcactta-ttcaaataagcacttatgcataga 25094158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 40436261 - 40436213
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatta 153  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||    
T  40436261 taagtgcaaaataatcacttatt-caaataagcacttatgcatataatta 40436213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 43931886 - 43931796
Alignment:
Q  182 aaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43931886 aaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 43931796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 6036580 - 6036485
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6036580 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 6036485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9570456 - 9570551
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9570456 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataagtgatctcacaatatt 9570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9576958 - 9577053
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9576958 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataagtgatctcacaatatt 9577053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 13015300 - 13015205
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13015300 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 13015205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 20651033 - 20651128
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20651033 ttgagaaatcatcgattaaatgataaaaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 20651128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 32746684 - 32746589
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32746684 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 32746589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43995392 - 43995297
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43995392 ttgagaaatcatcgattaaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcataatatt 43995297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 24179386 - 24179293
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24179386 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 24179293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 4311394 - 4311489
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4311394 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 4311489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 23068778 - 23068683
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23068778 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 23068683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 25893550 - 25893455
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25893550 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattgcacaatatt 25893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 17758609 - 17758531
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17758609 tcatcaattaacttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 17758531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 19059929 - 19059851
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19059929 tcatcaattaacttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 19059851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 27501877 - 27501970
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27501877 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27501970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 10941212 - 10941307
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10941212 ttgagaaatcatcgattaaatgataagaccgactcttgaaatattcaatagtttgagacattgacgattgaatgatacaattgatttcacaatatt 10941307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 40038929 - 40038852
Alignment:
Q  98 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40038929 atcaattaaattcaaaataatcatttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 40038852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 17393685 - 17393756
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaacta 171  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  17393685 caattaagttcataataatcacttatctcaattaagcaattatgcatagaattagggaagaagctacaacta 17393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 25103993 - 25103917
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||||||||||| ||||||||||||||||    
T  25103993 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatagaattaggatagaagctacaactaa 25103917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 38375692 - 38375632
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  38375692 caattaagtgcaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 38375632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 11515476 - 11515427
Alignment:
Q  111 aaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  11515476 aaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 11515427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 43427499 - 43427455
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattagg 155  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  43427499 caaaataatcacttatt-caattaagcacttatgcatacaattagg 43427455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 51961138 - 51961093
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcactta 141  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||    
T  51961138 tcatcaattaaatttgaaataatcacttatttcaattaagcactta 51961093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 11402841 - 11402890
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaa 150  Q
    |||||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  11402841 caattaagttcacaataatcactta-ttcaaataagcacttgtgcatagaa 11402890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 20952665 - 20952753
Alignment:
Q  180 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaa 268  Q
    ||||||| ||||||||| |||| |||||||| ||  ||  || ||||||||| || ||| |||| ||||  ||||||||||||||||||    
T  20952665 agaaatcgtcgattaaacgatacgatcgactattggattgtttaatagtttgggaaatcaacgactgaacaatacaattgatctcacaa 20952753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2959 - 2864
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2959 ttgagaaatcatcgatttaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 3924001 - 3924096
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3924001 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 3924096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 6020772 - 6020867
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6020772 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 6020867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9642824 - 9642919
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9642824 ttgagaaatcatcgattgaatgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 9642919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 14288029 - 14287934
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14288029 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 14287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 14299214 - 14299119
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14299214 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 14299119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 26602226 - 26602131
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26602226 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatctcacaatatt 26602131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 1379261 - 1379166
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1379261 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 1379166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1948541 - 1948636
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1948541 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 1948636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2446960 - 2446865
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2446960 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2446865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 5049820 - 5049915
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5049820 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5049915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 6795752 - 6795657
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6795752 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6795657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15914952 - 15914857
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  15914952 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 15914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 23612703 - 23612608
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23612703 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgatacatcgacgattgaatgatacaattgatttcacaatatt 23612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 36875859 - 36875764
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36875859 ttgagaaatcatcgattgaacaataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 36875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 8185302 - 8185395
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8185302 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 8185395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 8192862 - 8192955
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8192862 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 8192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 45433900 - 45433807
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaata 270  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  45433900 ttgagaaatcattgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgactattgaatggtacaattgatctcacaata 45433807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 48347006 - 48347099
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48347006 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 48347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 48353390 - 48353483
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48353390 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 48353483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15949473 - 15949378
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  15949473 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcataatatt 15949378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 19090122 - 19090027
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  19090122 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgagtgatacaattgatttcacaatatt 19090027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 33850551 - 33850646
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  33850551 ttgagaaatcatcgattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattttacaatatt 33850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 39433221 - 39433126
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  39433221 ttgagaaatcatcgattaaatgaaaagaccgactcttgaatcattcaatagtttgagacatcgacgattgacagatacaattgatttcacaatatt 39433126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 21642829 - 21642737
Alignment:
Q  180 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  21642829 agaaatcatcgattgtacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataattgatttcacaatatt 21642737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 8142354 - 8142449
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  8142354 ttgagaaatcatcaattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaaccattgaatgatacaattgatttcacaatatt 8142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 13774059 - 13774133
Alignment:
Q  198 gataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13774059 gataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 13774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 16383930 - 16384009
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  16383930 tcatcaattaaatataaaataatcacttatttcaattaagcacttacgcaaagaattagggtagaaactacaactaagag 16384009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 37026324 - 37026267
Alignment:
Q  215 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37026324 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 37026267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 5056253 - 5056310
Alignment:
Q  215 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5056253 aatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5056310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 15977839 - 15977773
Alignment:
Q  106 agttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||    
T  15977839 agttcataataatcacttatctcaattaagcacttatgtatagaattagagaagaagctacaactaa 15977773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 44305009 - 44304953
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  44305009 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 44304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 8563337 - 8563282
Alignment:
Q  106 agttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  8563337 agttcacaataatcacttatatcaaataagcacttatgcatagaattagggaagaa 8563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 18079498 - 18079421
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 173  Q
    ||||||||||| |||| ||||||||| |  | ||| ||||||||||| ||| ||| ||||||||||||||||||||||    
T  18079498 tcatcaattaatttcataataatcaccttatccaagtaagcacttatacatggaactagggtagaagctacaactaag 18079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 25124375 - 25124420
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcactta 141  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  25124375 tcatcaattaaattcgaaataatcacttatttcaattaagcactta 25124420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 9723803 - 9723748
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  9723803 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 9723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 8267720 - 8267669
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  8267720 taagtgcaaaataatcacttatt-caaataagcacttatgcatacaattaggg 8267669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 21537761 - 21537721
Alignment:
Q  132 taagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  21537761 taagcacttatgcatagaattggggaagaagctacaactaa 21537721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2439114 - 2439019
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2439114 ttgaaaaatcatcgattaaatgataagaccggctcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 2439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 4973877 - 4973782
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4973877 ttgagaaatcatcgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4973782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 5876532 - 5876437
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5876532 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 5876437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 22360278 - 22360183
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22360278 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 22360183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 29980773 - 29980678
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29980773 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 29980678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 30041152 - 30041247
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  30041152 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 30041247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34357196 - 34357291
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34357196 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34357291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34358987 - 34359082
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34358987 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34359082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 40958525 - 40958620
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  40958525 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatggtttgagacatcgacgattgaatgatacaattgatttcacaatatt 40958620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 2958171 - 2958078
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2958171 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2958078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 2966640 - 2966547
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2966640 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2966547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 25894559 - 25894652
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25894559 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 25894652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 42151133 - 42151041
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaat 269  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  42151133 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaat 42151041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 22314144 - 22314049
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||| ||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22314144 ttgagaaattatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 22314049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 29414577 - 29414672
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  29414577 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgataattgaatgatacaattgatttcacaatatt 29414672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 12505673 - 12505768
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  12505673 ttgagaaatcatcgattaaatgataagaccgactcttggaccattcaatattttgagacatcgacgattgaatgatacaattgatattacaatatt 12505768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 23417493 - 23417553
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  23417493 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 23417553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 16835291 - 16835240
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  16835291 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 16835240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19874016 - 19874067
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  19874016 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 19874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 11763496 - 11763446
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagg 155  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||||    
T  11763496 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattagg 11763446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 22662672 - 22662632
Alignment:
Q  107 gttcaaaataatcacttatttcaattaagcacttatgcata 147  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  22662672 gttcacaataatcacttatttcaattaaacacttattcata 22662632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 5660457 - 5660552
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5660457 ttgagaaatcatcgattaaatgataagactgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 5660552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 30211444 - 30211539
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30211444 ttgagaaatcaccgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 30211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36754699 - 36754794
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36754699 ttgagaaatcatcgattgaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 36754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 16405660 - 16405565
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  16405660 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacattgacaattgaatgatacaattgatttcacaatatt 16405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 30238574 - 30238479
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30238574 ttgagaaatcaacgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 30238479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 41373301 - 41373206
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41373301 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 41373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 55462680 - 55462775
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  55462680 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 55462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 17457167 - 17457074
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17457167 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 17457074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 27590617 - 27590524
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27590617 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27590524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 37368225 - 37368314
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaa 268  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37368225 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaa 37368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 13594420 - 13594327
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  13594420 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 13594327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 8104195 - 8104101
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  8104195 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaa-gatacaattgatttcacaatatt 8104101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 16838267 - 16838362
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  16838267 ttgagaaatcatcgattgaacgataagaccgactcttgaatcatttaatagtctgagacatcgacgattggatgatacaattgatttcacaatatt 16838362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 15213623 - 15213546
Alignment:
Q  98 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15213623 atcaattaaattcaaactaatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 15213546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 7780701 - 7780637
Alignment:
Q  197 tgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgat 261  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7780701 tgataagactgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgat 7780637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 54363295 - 54363229
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttc-aattaagcacttatgcatagaattagggtagaa 161  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  54363295 tcatcaattaaattcaaaataatcacttatttttaattaagcacttatgcatagaattagggaagaa 54363229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 17375305 - 17375241
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  17375305 tcatcaattaaattcaaaataatcacttatttcaattaatta-ttatgcatagaattagggaagaa 17375241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 12133605 - 12133531
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  12133605 caattaagt-cacaataatcacttatctcaaataagcacttatgcattgaaatagggaagaagctacaacttagag 12133531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 17373068 - 17373007
Alignment:
Q  99 tcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  17373068 tcaattaaattcaaaataatcacttatttcaattaatta-ttatgcatagaattagggaagaa 17373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 13590070 - 13590015
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  13590070 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 13590015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 10237270 - 10237193
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 173  Q
    ||||||||||| |||| |||||||||||  | ||| |||||| |||| |||  |||||||||| ||||||||||||||    
T  10237270 tcatcaattaatttcataataatcactttatacaaataagcatttatacatgaaattagggtaaaagctacaactaag 10237193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 21417558 - 21417612
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattag 154  Q
    |||||||| ||| |||||||||||||  ||| |||||||||||||| ||||||||    
T  21417558 caattaagctcacaataatcacttatcccaaataagcacttatgcaaagaattag 21417612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 50219929 - 50219884
Alignment:
Q  110 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  50219929 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 50219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15852864 - 15852769
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15852864 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 15852769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 42931280 - 42931375
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42931280 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 42931375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2157926 - 2157831
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2157926 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2157831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2164342 - 2164247
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2164342 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2164247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 12951110 - 12951015
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  12951110 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 12951015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 16817238 - 16817333
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16817238 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 16817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 16856395 - 16856490
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16856395 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 16856490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 21331902 - 21331997
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  21331902 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgacacaattgatttcacaatatt 21331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36782092 - 36782187
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36782092 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36782187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 45012295 - 45012202
Alignment:
Q  179 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45012295 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 45012202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 2021356 - 2021451
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  2021356 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacattgacaattgaatgatacaattgatttcacaatatt 2021451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34834720 - 34834815
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34834720 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34834815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34841164 - 34841259
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34841164 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34841259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 43268173 - 43268078
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43268173 ttgaaaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 43268078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 13901865 - 13901960
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  13901865 ttgagaaatcatcaattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaaccattgaatgatacaattgatttcacaatatt 13901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 21067866 - 21067961
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  21067866 ttgagaaatcatcgattgaacgataagatcgtctcttgaatcattcaatagtttgagacatcaacaattgaatgatacaattgatttcacaatatt 21067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 20279664 - 20279734
Alignment:
Q  102 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||  ||||||||||||||||||||||||||| | |||| |||||||| |||||||||||||||    
T  20279664 attaagttcaccataatcacttatttcaattaagcacttttacatacaattagggaagaagctacaactaa 20279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 21341834 - 21341883
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaata 226  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21341834 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaata 21341883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 45700636 - 45700595
Alignment:
Q  231 gagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  45700636 gagacatagacgattgaatgatacaattgatctcacaatatt 45700595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 13163132 - 13163039
Alignment:
Q  178 tgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatat 271  Q
    ||||||||| ||||||||| |||| |||||| | ||  ||| || ||||||||| || ||| |||||| || |||||||||||| |||||||||    
T  13163132 tgagaaatcgtcgattaaacgatacgatcgaatgttggatcgtttaatagtttgggaaatcaacgattaaacgatacaattgatttcacaatat 13163039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 18537007 - 18537067
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  18537007 caattaagtgaaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 18537067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 29485182 - 29485146
Alignment:
Q  236 atcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29485182 atcgacgattgaatgatacaattgatttcacaatatt 29485146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 25595275 - 25595331
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||| ||||||||||||||| | ||  ||||||||||||||||||||||||| ||||    
T  25595275 taagtgcaaaataatcacttagt-cacataagcacttatgcatagaattagggaagaa 25595331  T

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Target: scaffold0510 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 2468 - 2563
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2468 ttgagaaatcattgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2563  T

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Target: scaffold0510; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 8789 - 8884
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  8789 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 8884  T

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Target: scaffold0053 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 50004 - 49909
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  50004 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 49909  T

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Target: scaffold0043 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 4913 - 5008
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4913 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5008  T

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Target: scaffold0513 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 12247 - 12152
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  12247 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 12152  T

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Target: scaffold0060 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15485 - 15390
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  15485 ttgagaaatcatcgattaaatgataagaccgattcttgaatcattcaatagtgtgagacatcaacgattgaatgatacaattgatctcacattatt 15390  T

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Target: scaffold0936 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 3172 - 3267
Alignment:
Q  177 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 272  Q
    ||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3172 ttgagaaatcatcgattgaacggtaagaccgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 3267  T

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Target: scaffold0452 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 2787 - 2708
Alignment:
Q  96 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2787 tcatcaattaaattcaaaataatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 2708  T

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Target: scaffold1204 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 90 - 13
Alignment:
Q  98 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  90 atcaattaaattcaaactaatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 13  T

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Target: scaffold0090 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 34454 - 34382
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  34454 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaagaagctacaactaa 34382  T

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Target: scaffold0084 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 55227 - 55299
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||    
T  55227 caattaagttcaaaataatcacttatctcaaataagcacttatgcataaaattagggaagaagctacaactaa 55299  T

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Target: scaffold0084; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 2934 - 3006
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||||||    
T  2934 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagcgaagacgctacaactaa 3006  T

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Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 116166 - 116099
Alignment:
Q  105 aagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||| ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||    
T  116166 aagttcataataatcacttatctcaaataatcacttatgcatagaattagggaagaagctacaactaa 116099  T

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Target: scaffold0317 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 12594 - 12524
Alignment:
Q  105 aagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    ||||||| ||||||||||||| |||| || |||||||||||||||||||||  ||||||||||||||||||    
T  12594 aagttcataataatcacttatctcaaatatgcacttatgcatagaattaggaaagaagctacaactaagag 12524  T

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Target: scaffold0047 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 19931 - 19870
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  19931 caattaagttcacaataatcacttatctcaaataaacacttatgcatagaattagggaagaa 19870  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 33408 - 33349
Alignment:
Q  101 aattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  33408 aattaagtacaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 33349  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 13021 - 13092
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 175  Q
    |||| ||| |||||||||||||   || ||| |||||||||||  |||||||||||||||||||||||||||    
T  13021 taagctcacaataatcacttatccaaaataatcacttatgcatgaaattagggtagaagctacaactaagag 13092  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 67953 - 67893
Alignment:
Q  100 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    ||||||| | ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  67953 caattaattgcaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 67893  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 7061 - 7014
Alignment:
Q  114 ataatcacttatttcaattaagcacttatgcatagaattagggtagaa 161  Q
    |||||||||||| |||| |||||||||| |||||||||||||| ||||    
T  7061 ataatcacttatctcaaataagcacttaagcatagaattagggaagaa 7014  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 113969 - 114017
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatta 153  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||    
T  113969 taagtgcaaaataatcacttatt-caaataagcacttatgcatataatta 114017  T

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Target: scaffold0601 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 872 - 825
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatt 152  Q
    ||||| ||||||||||||||||| ||| |||||||||||| ||||||||    
T  872 taagtgcaaaataatcacttatt-caaataagcacttatgtatagaatt 825  T

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Target: scaffold0561 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 2764 - 2713
Alignment:
Q  104 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 156  Q
    ||||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||    
T  2764 taagtgcaaaataatcactta-ttcaaataagcagttatgcatataattaggg 2713  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 244814 - 244774
Alignment:
Q  132 taagcacttatgcatagaattagggtagaagctacaactaa 172  Q
    ||||||||||||||||||||||| | ||| |||||||||||    
T  244814 taagcacttatgcatagaattagagaagaggctacaactaa 244774  T

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