View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20082_high_7 (Length: 495)

Name: NF20082_high_7
Description: NF20082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20082_high_7
NF20082_high_7
[»] chr5 (37 HSPs)
chr5 (1-181)||(8420914-8421096)
chr5 (383-495)||(8421195-8421307)
chr5 (239-356)||(13863097-13863213)
chr5 (185-235)||(17674432-17674482)
chr5 (190-235)||(1266162-1266207)
chr5 (190-235)||(3686533-3686578)
chr5 (190-235)||(6673007-6673052)
chr5 (190-235)||(13862774-13862819)
chr5 (190-235)||(16153034-16153079)
chr5 (190-235)||(22527905-22527950)
chr5 (190-235)||(31889106-31889151)
chr5 (190-235)||(32478351-32478396)
chr5 (190-235)||(41641312-41641357)
chr5 (184-235)||(17592575-17592626)
chr5 (185-235)||(7951773-7951823)
chr5 (190-235)||(4752997-4753042)
chr5 (190-235)||(4984895-4984940)
chr5 (190-235)||(10734300-10734345)
chr5 (197-234)||(12098774-12098811)
chr5 (194-235)||(15521725-15521766)
chr5 (190-235)||(25600839-25600884)
chr5 (190-235)||(28041130-28041175)
chr5 (190-235)||(34662417-34662462)
chr5 (192-235)||(8100175-8100218)
chr5 (184-235)||(9828605-9828656)
chr5 (192-235)||(28140701-28140744)
chr5 (192-235)||(31158209-31158251)
chr5 (192-235)||(42561130-42561173)
chr5 (185-235)||(3497575-3497625)
chr5 (185-235)||(23286256-23286306)
chr5 (185-235)||(41383947-41383997)
chr5 (186-235)||(7735047-7735096)
chr5 (182-235)||(13661071-13661124)
chr5 (190-231)||(15190594-15190635)
chr5 (195-235)||(5528187-5528227)
chr5 (184-235)||(8421135-8421189)
chr5 (192-236)||(26605397-26605441)
[»] chr6 (25 HSPs)
chr6 (240-358)||(26011476-26011594)
chr6 (239-358)||(24373818-24373937)
chr6 (190-235)||(230886-230931)
chr6 (190-235)||(17175244-17175289)
chr6 (239-309)||(24377514-24377586)
chr6 (190-235)||(29036287-29036332)
chr6 (190-235)||(33488044-33488089)
chr6 (190-235)||(34301611-34301656)
chr6 (192-235)||(1779826-1779869)
chr6 (184-235)||(6418083-6418134)
chr6 (192-235)||(25024287-25024330)
chr6 (192-235)||(25197365-25197408)
chr6 (185-235)||(9388564-9388614)
chr6 (185-235)||(15287350-15287400)
chr6 (185-235)||(23397914-23397964)
chr6 (194-235)||(6147596-6147637)
chr6 (190-235)||(12105843-12105888)
chr6 (196-235)||(5457625-5457664)
chr6 (192-235)||(15126676-15126718)
chr6 (185-235)||(8743399-8743449)
chr6 (185-235)||(11655843-11655893)
chr6 (193-235)||(30248860-30248902)
chr6 (190-235)||(287193-287238)
chr6 (190-235)||(10195773-10195818)
chr6 (192-224)||(33773803-33773835)
[»] chr4 (55 HSPs)
chr4 (233-303)||(56106975-56107045)
chr4 (239-303)||(56111756-56111820)
chr4 (190-235)||(9328019-9328064)
chr4 (184-235)||(29427702-29427753)
chr4 (185-235)||(2615718-2615768)
chr4 (190-235)||(422708-422753)
chr4 (190-235)||(20285800-20285845)
chr4 (190-235)||(20391217-20391262)
chr4 (190-235)||(24754291-24754336)
chr4 (190-235)||(30745579-30745624)
chr4 (190-235)||(30771735-30771780)
chr4 (190-235)||(32032770-32032815)
chr4 (190-235)||(33501708-33501753)
chr4 (190-235)||(35675699-35675744)
chr4 (190-235)||(36392067-36392112)
chr4 (190-235)||(37352756-37352801)
chr4 (190-235)||(37364730-37364775)
chr4 (190-235)||(43387772-43387817)
chr4 (190-235)||(49228497-49228542)
chr4 (190-235)||(53276965-53277010)
chr4 (190-235)||(54676761-54676806)
chr4 (192-235)||(6753738-6753781)
chr4 (190-235)||(5375337-5375382)
chr4 (190-235)||(10588287-10588332)
chr4 (190-235)||(15241692-15241737)
chr4 (194-235)||(19281874-19281915)
chr4 (194-235)||(33413731-33413772)
chr4 (190-235)||(34272998-34273043)
chr4 (190-235)||(44295002-44295047)
chr4 (190-235)||(45742585-45742630)
chr4 (190-235)||(47807073-47807118)
chr4 (190-235)||(50534096-50534141)
chr4 (190-235)||(51536380-51536425)
chr4 (190-235)||(52978195-52978240)
chr4 (184-236)||(4416176-4416228)
chr4 (192-235)||(8344118-8344161)
chr4 (192-235)||(17339291-17339334)
chr4 (192-235)||(34948434-34948477)
chr4 (196-235)||(37357655-37357694)
chr4 (192-235)||(55562907-55562950)
chr4 (185-235)||(1859355-1859405)
chr4 (185-235)||(4036037-4036087)
chr4 (185-235)||(5743434-5743484)
chr4 (185-235)||(25708454-25708504)
chr4 (185-235)||(39144616-39144666)
chr4 (185-235)||(52870856-52870906)
chr4 (190-235)||(1028731-1028776)
chr4 (198-235)||(2406056-2406093)
chr4 (190-235)||(4455275-4455320)
chr4 (190-235)||(17609801-17609846)
chr4 (190-235)||(47228507-47228552)
chr4 (190-235)||(47299017-47299062)
chr4 (194-235)||(50424637-50424678)
chr4 (192-236)||(6083495-6083539)
chr4 (195-235)||(51336006-51336046)
[»] scaffold0446 (1 HSPs)
scaffold0446 (239-303)||(10620-10684)
[»] chr3 (61 HSPs)
chr3 (190-235)||(26593544-26593589)
chr3 (185-235)||(9499271-9499321)
chr3 (185-235)||(20862409-20862459)
chr3 (185-235)||(25130858-25130908)
chr3 (190-235)||(12675202-12675247)
chr3 (190-235)||(20656089-20656134)
chr3 (190-235)||(22103708-22103753)
chr3 (190-235)||(23700564-23700609)
chr3 (190-235)||(23719019-23719064)
chr3 (190-235)||(23737475-23737520)
chr3 (190-235)||(25148668-25148713)
chr3 (190-235)||(30040796-30040841)
chr3 (190-235)||(43701391-43701436)
chr3 (190-235)||(43868316-43868361)
chr3 (190-235)||(45048801-45048846)
chr3 (190-235)||(46703240-46703285)
chr3 (190-235)||(46878218-46878263)
chr3 (190-235)||(49126977-49127022)
chr3 (190-235)||(52673400-52673445)
chr3 (190-235)||(54107566-54107611)
chr3 (190-234)||(35165742-35165786)
chr3 (184-235)||(1572542-1572593)
chr3 (192-235)||(21756699-21756742)
chr3 (192-235)||(45745991-45746034)
chr3 (184-235)||(52059019-52059070)
chr3 (185-235)||(17591320-17591370)
chr3 (185-235)||(26221501-26221551)
chr3 (185-235)||(44543994-44544044)
chr3 (185-235)||(50647719-50647769)
chr3 (190-235)||(1641879-1641924)
chr3 (190-235)||(7051499-7051544)
chr3 (190-235)||(7181563-7181608)
chr3 (190-235)||(20849045-20849090)
chr3 (190-235)||(31531190-31531235)
chr3 (190-235)||(32467638-32467683)
chr3 (190-235)||(45252986-45253031)
chr3 (190-235)||(54604367-54604412)
chr3 (195-235)||(7251066-7251106)
chr3 (192-235)||(14759047-14759090)
chr3 (192-235)||(21459195-21459238)
chr3 (192-235)||(25916615-25916658)
chr3 (196-235)||(26058751-26058790)
chr3 (184-235)||(37728925-37728976)
chr3 (192-235)||(39952483-39952526)
chr3 (192-235)||(42801563-42801606)
chr3 (240-283)||(54430957-54431000)
chr3 (192-235)||(54782698-54782741)
chr3 (185-231)||(7462875-7462921)
chr3 (185-235)||(9780014-9780064)
chr3 (185-235)||(26806155-26806205)
chr3 (185-235)||(33868660-33868710)
chr3 (185-235)||(36005716-36005766)
chr3 (185-235)||(36099176-36099226)
chr3 (185-235)||(36317431-36317480)
chr3 (240-282)||(54431770-54431812)
chr3 (198-235)||(32569210-32569247)
chr3 (190-235)||(32962884-32962929)
chr3 (194-235)||(53164376-53164417)
chr3 (192-232)||(25148903-25148943)
chr3 (192-224)||(43408234-43408266)
chr3 (192-236)||(48887727-48887771)
[»] chr2 (36 HSPs)
chr2 (190-235)||(16669839-16669884)
chr2 (185-235)||(34062439-34062489)
chr2 (190-235)||(5664851-5664896)
chr2 (190-235)||(8716671-8716716)
chr2 (190-235)||(15404487-15404532)
chr2 (190-235)||(20252423-20252468)
chr2 (190-235)||(20727637-20727682)
chr2 (190-235)||(25624942-25624987)
chr2 (190-235)||(32121157-32121202)
chr2 (190-235)||(34883627-34883672)
chr2 (190-235)||(36130807-36130852)
chr2 (192-235)||(8990417-8990460)
chr2 (184-235)||(16108249-16108300)
chr2 (192-235)||(37229653-37229696)
chr2 (185-235)||(4711939-4711989)
chr2 (185-235)||(23789181-23789231)
chr2 (190-235)||(1943787-1943832)
chr2 (194-235)||(36021033-36021074)
chr2 (190-235)||(40680940-40680985)
chr2 (190-235)||(41450729-41450774)
chr2 (190-235)||(42629577-42629622)
chr2 (190-235)||(44436264-44436309)
chr2 (190-235)||(45474528-45474573)
chr2 (192-235)||(15227932-15227975)
chr2 (192-235)||(26334666-26334709)
chr2 (185-235)||(8841432-8841482)
chr2 (185-235)||(9697916-9697966)
chr2 (193-235)||(13197427-13197469)
chr2 (185-235)||(16456647-16456697)
chr2 (185-235)||(17408069-17408119)
chr2 (185-235)||(22897603-22897653)
chr2 (185-235)||(23083710-23083760)
chr2 (185-235)||(39833774-39833824)
chr2 (190-235)||(3670257-3670302)
chr2 (192-233)||(41004156-41004197)
chr2 (196-232)||(7455850-7455886)
[»] chr7 (46 HSPs)
chr7 (192-235)||(10071848-10071891)
chr7 (185-235)||(23320868-23320918)
chr7 (190-235)||(1275512-1275557)
chr7 (190-235)||(6387538-6387583)
chr7 (190-235)||(7703600-7703645)
chr7 (190-235)||(8291116-8291161)
chr7 (190-235)||(8612354-8612399)
chr7 (190-235)||(25247470-25247515)
chr7 (190-235)||(26255308-26255353)
chr7 (190-235)||(29642923-29642968)
chr7 (190-235)||(32814646-32814691)
chr7 (190-235)||(33858646-33858691)
chr7 (190-235)||(34978856-34978901)
chr7 (190-235)||(36646416-36646461)
chr7 (190-235)||(39871392-39871437)
chr7 (190-235)||(41025875-41025920)
chr7 (190-235)||(41252141-41252186)
chr7 (190-235)||(49110806-49110851)
chr7 (191-235)||(2006688-2006732)
chr7 (191-235)||(36697911-36697955)
chr7 (192-235)||(7449481-7449524)
chr7 (192-235)||(29285818-29285861)
chr7 (192-235)||(32872156-32872199)
chr7 (185-235)||(21295363-21295413)
chr7 (185-235)||(34012293-34012343)
chr7 (185-235)||(34896070-34896120)
chr7 (190-235)||(17327084-17327129)
chr7 (190-231)||(17491732-17491773)
chr7 (190-231)||(17561441-17561482)
chr7 (190-235)||(31200143-31200188)
chr7 (190-235)||(39197931-39197976)
chr7 (190-235)||(40300443-40300488)
chr7 (190-235)||(44547639-44547684)
chr7 (191-235)||(7400344-7400388)
chr7 (184-235)||(9036703-9036754)
chr7 (185-236)||(9303861-9303912)
chr7 (197-235)||(10538917-10538955)
chr7 (190-232)||(29064236-29064278)
chr7 (185-235)||(29177027-29177077)
chr7 (185-235)||(36711073-36711123)
chr7 (185-235)||(38428359-38428409)
chr7 (185-235)||(47534678-47534728)
chr7 (190-235)||(31458210-31458255)
chr7 (190-235)||(48521239-48521284)
chr7 (199-235)||(18112955-18112991)
chr7 (195-235)||(41002939-41002979)
[»] scaffold0649 (1 HSPs)
scaffold0649 (190-235)||(4077-4122)
[»] scaffold0368 (1 HSPs)
scaffold0368 (190-235)||(8430-8475)
[»] scaffold0202 (1 HSPs)
scaffold0202 (190-235)||(9533-9578)
[»] scaffold0097 (1 HSPs)
scaffold0097 (190-235)||(31466-31511)
[»] scaffold0047 (1 HSPs)
scaffold0047 (190-235)||(61632-61677)
[»] chr8 (48 HSPs)
chr8 (190-235)||(50874-50919)
chr8 (190-235)||(4076385-4076430)
chr8 (190-235)||(5268181-5268226)
chr8 (190-235)||(7758708-7758753)
chr8 (190-235)||(8251712-8251757)
chr8 (190-235)||(8948130-8948175)
chr8 (190-235)||(18754358-18754403)
chr8 (190-235)||(29598437-29598482)
chr8 (190-235)||(32675536-32675581)
chr8 (190-235)||(34490730-34490775)
chr8 (190-235)||(35504359-35504404)
chr8 (190-235)||(38183345-38183390)
chr8 (190-235)||(38878934-38878979)
chr8 (190-235)||(41014717-41014762)
chr8 (190-235)||(42598495-42598540)
chr8 (190-235)||(42885383-42885428)
chr8 (191-235)||(16117231-16117275)
chr8 (191-235)||(16125490-16125534)
chr8 (191-235)||(18455933-18455977)
chr8 (192-235)||(28191956-28191999)
chr8 (192-235)||(36661707-36661750)
chr8 (239-281)||(1141914-1141956)
chr8 (185-235)||(12255307-12255357)
chr8 (185-235)||(12260850-12260900)
chr8 (185-235)||(40530358-40530408)
chr8 (185-235)||(44502835-44502885)
chr8 (190-235)||(1774555-1774600)
chr8 (190-235)||(8951207-8951252)
chr8 (190-235)||(16999210-16999255)
chr8 (194-235)||(21137068-21137109)
chr8 (186-231)||(28579855-28579900)
chr8 (190-235)||(34568703-34568748)
chr8 (190-231)||(36176882-36176923)
chr8 (192-235)||(2944055-2944098)
chr8 (184-235)||(11798817-11798868)
chr8 (192-235)||(14699665-14699708)
chr8 (192-235)||(21652263-21652306)
chr8 (192-235)||(30140295-30140338)
chr8 (192-235)||(39112543-39112586)
chr8 (184-235)||(43653977-43654028)
chr8 (185-235)||(4631328-4631378)
chr8 (185-235)||(13154140-13154190)
chr8 (190-232)||(42218126-42218168)
chr8 (185-235)||(44250894-44250944)
chr8 (194-235)||(33745680-33745721)
chr8 (184-236)||(2152014-2152066)
chr8 (195-235)||(18641161-18641201)
chr8 (195-235)||(28864292-28864332)
[»] chr1 (41 HSPs)
chr1 (190-235)||(943416-943461)
chr1 (190-235)||(16456849-16456894)
chr1 (190-235)||(42872113-42872158)
chr1 (190-235)||(45336098-45336143)
chr1 (190-235)||(45794557-45794602)
chr1 (190-235)||(46075647-46075692)
chr1 (190-235)||(47300672-47300717)
chr1 (190-235)||(52430953-52430998)
chr1 (192-235)||(50008264-50008307)
chr1 (190-235)||(2280166-2280211)
chr1 (194-235)||(11741610-11741651)
chr1 (190-235)||(11907007-11907052)
chr1 (190-235)||(16575871-16575916)
chr1 (190-235)||(30290478-30290523)
chr1 (190-235)||(36880402-36880447)
chr1 (190-235)||(50246709-50246754)
chr1 (192-235)||(18237304-18237347)
chr1 (196-235)||(32169740-32169779)
chr1 (192-235)||(32906748-32906791)
chr1 (192-235)||(37951731-37951774)
chr1 (192-235)||(44529456-44529499)
chr1 (200-235)||(50008186-50008221)
chr1 (197-235)||(896838-896876)
chr1 (185-235)||(1048027-1048077)
chr1 (185-235)||(9202280-9202330)
chr1 (185-235)||(13698823-13698873)
chr1 (185-235)||(15811007-15811057)
chr1 (185-235)||(30289637-30289687)
chr1 (185-235)||(39362969-39363019)
chr1 (185-235)||(39750156-39750206)
chr1 (185-235)||(44646483-44646533)
chr1 (185-235)||(44649841-44649891)
chr1 (185-235)||(47263670-47263720)
chr1 (193-235)||(49907234-49907276)
chr1 (194-235)||(8104073-8104114)
chr1 (182-235)||(27530958-27531011)
chr1 (190-235)||(47296346-47296391)
chr1 (196-232)||(9413588-9413624)
chr1 (195-235)||(27974940-27974980)
chr1 (195-235)||(37585164-37585204)
chr1 (195-235)||(48854029-48854069)
[»] scaffold0122 (1 HSPs)
scaffold0122 (184-235)||(12276-12327)
[»] scaffold0029 (1 HSPs)
scaffold0029 (192-235)||(51463-51506)
[»] scaffold0012 (1 HSPs)
scaffold0012 (185-235)||(47852-47902)
[»] scaffold0121 (1 HSPs)
scaffold0121 (190-235)||(24411-24456)
[»] scaffold0308 (2 HSPs)
scaffold0308 (192-235)||(5067-5110)
scaffold0308 (192-235)||(14130-14173)
[»] scaffold0025 (1 HSPs)
scaffold0025 (185-235)||(65413-65463)
[»] scaffold0339 (1 HSPs)
scaffold0339 (190-235)||(6919-6964)
[»] scaffold0107 (1 HSPs)
scaffold0107 (192-233)||(48868-48909)
[»] scaffold0008 (1 HSPs)
scaffold0008 (190-235)||(258901-258946)
[»] scaffold0019 (1 HSPs)
scaffold0019 (195-235)||(118058-118098)
[»] scaffold0015 (1 HSPs)
scaffold0015 (195-235)||(17502-17542)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 8420914 - 8421096
Alignment:
Q  1 caaatgggttattggctgcttggtagaatttaatgaataaagaattttcaacaggagagagcc---aggaatgctgcaggaattaaacttgtgagattaa 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  8420914 caaatgggttattggctgcttggtagaatttaatgaataaagaattttcaacaggagagagccaggaggaatgctgcaggaattaaacttgtgagattaa 8421013  T
Q  98 aaatcacgactcgggcacaatcagaaaaatcattttttgtaaaacttttcagagattctttcttaataggaagagcgttatttg 181  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8421014 aaatcacgactc-ggcacaatcagaaaaattattttttgtaaaacttttcagagattctttcttcataggaagagcgttatttg 8421096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 383 - 495
Target Start/End: Original strand, 8421195 - 8421307
Alignment:
Q  383 attgtaactattcttgtaaaagacattggcttcccttctattactcaatccttccctctattattaaaaatagaaggggtatcatttaaagagaattaat 482  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8421195 attgtaactattcttgtaaaagacattggcttcccttctattactcaatccttccctctattattaataatagaaggggtatcatttaaagagaattaat 8421294  T
Q  483 aaaagtgtagaat 495  Q
    |||||||||||||    
T  8421295 aaaagtgtagaat 8421307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 356
Target Start/End: Original strand, 13863097 - 13863213
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatcacccctttttgatagtggtctaccgaatcaccggtt 338  Q
    |||||||||||| ||||| | |||||||||| |||||| ||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  13863097 aaatgctattgaaaaactatatgtcaaactccttttaatacactcccatacataaagccacgtcacccc-ttttgatagtggtctaccgaatcacctatt 13863195  T
Q  339 cttcaagttgaaaagaaa 356  Q
    ||||||||||||||||||    
T  13863196 cttcaagttgaaaagaaa 13863213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17674432 - 17674482
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  17674432 taaaatcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 17674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1266207 - 1266162
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  1266207 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 1266162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 3686533 - 3686578
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  3686533 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 3686578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 6673007 - 6673052
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  6673007 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 6673052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 13862774 - 13862819
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  13862774 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 13862819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 16153034 - 16153079
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  16153034 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 16153079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 22527950 - 22527905
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  22527950 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 22527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31889151 - 31889106
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  31889151 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 31889106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32478396 - 32478351
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  32478396 tcacgggaattaatataatggatatttgtattaaagttgtttgtaa 32478351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 41641357 - 41641312
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  41641357 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 41641312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 17592575 - 17592626
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  17592575 ttaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 17592626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 7951823 - 7951773
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  7951823 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 7951773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4752997 - 4753042
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  4752997 tcacggaaattaagatagtggatatttgtattaaagttgtttgtaa 4753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4984895 - 4984940
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||    
T  4984895 tcacgggaattaagatagtggatatttgtattatagttgtttgtaa 4984940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10734300 - 10734345
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  10734300 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 10734345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 12098811 - 12098774
Alignment:
Q  197 aattaagataattgatatttgtattaaagttgtttgta 234  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12098811 aattaagaaaattgatatttgtattaaagttgtttgta 12098774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 15521725 - 15521766
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  15521725 gggaattaagatagtggatatttgtattaaagttgtttgtaa 15521766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25600839 - 25600884
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  25600839 tcacgggaattaagatagtggatatttatattaaagttgtttgtaa 25600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 28041130 - 28041175
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||    
T  28041130 tcacgggaattaagatagtggatatttgtattacagttgtttgtaa 28041175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 34662462 - 34662417
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||    
T  34662462 tcacgggaaataagatagtggatatttgtattaaagttgtttgtaa 34662417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 8100175 - 8100218
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||    
T  8100175 acgggaattaagaaagttgatatttgtattaaatttgtttgtaa 8100218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 9828656 - 9828605
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  9828656 ttaaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 9828605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 28140701 - 28140744
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  28140701 acgggaattaagataatggatatttgtattaaatatgtttgtaa 28140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 31158209 - 31158251
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  31158209 acgggaattaaga-aagtgatatttgtattaaagttgtttgtaa 31158251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 42561130 - 42561173
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  42561130 acggaaattaagatagtggatatttgtattaaagttgtttgtaa 42561173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 3497575 - 3497625
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  3497575 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 3497625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23286256 - 23286306
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  23286256 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 23286306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 41383947 - 41383997
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  41383947 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 41383997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 7735096 - 7735047
Alignment:
Q  186 aaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | |||||||||||||||  |||||||||    
T  7735096 aaagtaacgggaattaagatagtggatatttgtattaaatatgtttgtaa 7735047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13661124 - 13661071
Alignment:
Q  182 tattaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||| |||||| |||||||| |   ||||||||||||||||||||||||||    
T  13661124 tattaaaatcacggaaattaagaaagcggatatttgtattaaagttgtttgtaa 13661071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 15190594 - 15190635
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    ||||||||||||||||| | ||||||||||||||| ||||||    
T  15190594 tcacgggaattaagatagtggatatttgtattaaaattgttt 15190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 5528227 - 5528187
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||| ||| | ||||||||||||||||||||||||||    
T  5528227 ggaattaaaatagtggatatttgtattaaagttgtttgtaa 5528187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 8421135 - 8421189
Alignment:
Q  184 ttaaagtcacgggaattaagataattg---atatttgtattaaagttgtttgtaa 235  Q
    ||||| |||||| |||||||||| |||   |||||||||||||||||||||||||    
T  8421135 ttaaaatcacggaaattaagatagttgttgatatttgtattaaagttgtttgtaa 8421189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 26605397 - 26605441
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    ||||||||||||| | | ||||||| |||||||||||||||||||    
T  26605397 acgggaattaagaaagtggatatttatattaaagttgtttgtaag 26605441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 26011476 - 26011594
Alignment:
Q  240 aatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatcacccctttttgatagtggtctaccgaatcaccggttc 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  26011476 aatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacgtcacccttttttgatagtggtctaccgaatcacccgttc 26011575  T
Q  340 ttcaagttgaaaagaaata 358  Q
    |||||||||||||||||||    
T  26011576 ttcaagttgaaaagaaata 26011594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 239 - 358
Target Start/End: Original strand, 24373818 - 24373937
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatcacccctttttgatagtggtctaccgaatcaccggtt 338  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24373818 aaatgctatttacacactctctgtcaaactccttttaacacactcccatatatgaagccacgtcacccctttttgatagtggtctaccgaatcaccggtt 24373917  T
Q  339 cttcaagttgaaaagaaata 358  Q
    ||||||||||||||||||||    
T  24373918 cttcaagttgaaaagaaata 24373937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 230886 - 230931
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  230886 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 230931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17175244 - 17175289
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  17175244 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 17175289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 24377514 - 24377586
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacactccc--atatatgaagccacatcacccctt 309  Q
    ||||| |||| ||||||||| ||| |||||| |||||||||||||||  |||||||||||||| |||||||||    
T  24377514 aaatgttatttacaaactctatgttaaactccttttaacacactcccatatatatgaagccacgtcacccctt 24377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29036332 - 29036287
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  29036332 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 29036287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 33488089 - 33488044
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  33488089 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 33488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34301611 - 34301656
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  34301611 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 34301656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 1779826 - 1779869
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  1779826 acgggaattaagaaaatggatatttgtattaaagttgtttgtaa 1779869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 6418134 - 6418083
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  6418134 ttaaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 6418083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 25024287 - 25024330
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  25024287 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 25024330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 25197408 - 25197365
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  25197408 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 25197365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9388564 - 9388614
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  9388564 taaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 9388614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 15287400 - 15287350
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  15287400 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 15287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23397914 - 23397964
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||    
T  23397914 taaaatcacgggaattaagaaaatgaatatttgtattaaagttgtttgtaa 23397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 6147637 - 6147596
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  6147637 gggaattaagatagtggatatttgtattaaagttgtttgtaa 6147596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12105843 - 12105888
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  12105843 tcacgggaattaagatagtggatatttatattaaagttgtttgtaa 12105888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 5457664 - 5457625
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  5457664 gaattaagatagtggatatttgtattaaagttgtttgtaa 5457625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 15126718 - 15126676
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  15126718 acgggaattaaga-aagtgatatttgtattaaagttgtttgtaa 15126676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8743449 - 8743399
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  8743449 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 8743399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 11655843 - 11655893
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  11655843 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 11655893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 30248902 - 30248860
Alignment:
Q  193 cgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||| ||| | ||||||||||||||||||||||||||    
T  30248902 cgggaattaaaatagtggatatttgtattaaagttgtttgtaa 30248860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 287193 - 287238
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| ||| |  |||||||||||||||||||||||||    
T  287193 tcacgggaattaatatagtgaatatttgtattaaagttgtttgtaa 287238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 10195773 - 10195818
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||| ||| | ||||||||||||||||||||||||||    
T  10195773 tcacgagaattaacatagtggatatttgtattaaagttgtttgtaa 10195818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 33773835 - 33773803
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaa 224  Q
    ||||||||||||||| |||||||||||||||||    
T  33773835 acgggaattaagatagttgatatttgtattaaa 33773803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 56106975 - 56107045
Alignment:
Q  233 taagacaaatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatca 303  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| | | || ||||||||||||||    
T  56106975 taagagaaatgcttttgacaaactctctgtcaaactctttttaacacaccctcttacatgaagccacatca 56107045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 56111820 - 56111756
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatca 303  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||    
T  56111820 aaatgttattgacaaactctctgtcaaactctttttaacacaccctcttacatgaagccacatca 56111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 9328019 - 9328064
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9328019 tcacgggaattaagatagttgatatttgtattaaagttgtttgtaa 9328064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 29427753 - 29427702
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  29427753 ttaaaatcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 29427702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 2615718 - 2615768
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  2615718 taaaatcacgggaattaagaaagttgatatttgtattaaagttgtttgtaa 2615768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 422708 - 422753
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  422708 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 422753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20285800 - 20285845
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20285800 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 20285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20391217 - 20391262
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20391217 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 20391262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 24754336 - 24754291
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  24754336 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 24754291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 30745579 - 30745624
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  30745579 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 30745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 30771780 - 30771735
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  30771780 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 30771735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 32032770 - 32032815
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  32032770 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 32032815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 33501708 - 33501753
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  33501708 tcacaggaattaagatagttgatatttgtattaaagttgtttgtaa 33501753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35675699 - 35675744
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  35675699 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 35675744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 36392112 - 36392067
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  36392112 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 36392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 37352801 - 37352756
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  37352801 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 37352756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 37364775 - 37364730
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  37364775 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 37364730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 43387772 - 43387817
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  43387772 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 43387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 49228497 - 49228542
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  49228497 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 49228542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 53276965 - 53277010
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  53276965 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 53277010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 54676806 - 54676761
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  54676806 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 54676761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 6753781 - 6753738
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  6753781 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 6753738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 5375337 - 5375382
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  5375337 tcacggaaattaagatagtggatatttgtattaaagttgtttgtaa 5375382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 10588332 - 10588287
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  10588332 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 10588287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 15241737 - 15241692
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  15241737 tcacggaaattaagatagtggatatttgtattaaagttgtttgtaa 15241692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 19281874 - 19281915
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  19281874 gggaattaagatagtggatatttgtattaaagttgtttgtaa 19281915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 33413772 - 33413731
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  33413772 gggaattaagatagtggatatttgtattaaagttgtttgtaa 33413731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34272998 - 34273043
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||    
T  34272998 tcacgggaactaagatagtggatatttgtattaaagttgtttgtaa 34273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 44295047 - 44295002
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  44295047 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 44295002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 45742585 - 45742630
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  45742585 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 45742630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 47807118 - 47807073
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||    
T  47807118 tcacgggaattaagatagtggatatttgtattaaagttatttgtaa 47807073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 50534141 - 50534096
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||    
T  50534141 tcacgggaattaagatagtggatatttgtattaaagttatttgtaa 50534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 51536425 - 51536380
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||    
T  51536425 tcacaggaattaagatagtggatatttgtattaaagttgtttgtaa 51536380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 52978240 - 52978195
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  52978240 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 52978195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 4416228 - 4416176
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    ||||| ||||||||||||||| | | ||||||| |||||||||||||||||||    
T  4416228 ttaaaatcacgggaattaagaaagtggatatttatattaaagttgtttgtaag 4416176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 8344161 - 8344118
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  8344161 acggtaattaagatagtggatatttgtattaaagttgtttgtaa 8344118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 17339334 - 17339291
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  17339334 acgggaattaagataatggatatttgtattaaatatgtttgtaa 17339291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 34948434 - 34948477
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| |||  |||||||||||||||||||||||||    
T  34948434 acgggaattaagaaaatgaatatttgtattaaagttgtttgtaa 34948477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 37357694 - 37357655
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  37357694 gaattaagatagtggatatttgtattaaagttgtttgtaa 37357655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 55562907 - 55562950
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |||||||||||||||||  |||||||||    
T  55562907 acgggaattaagatagttgatatttgtattaaatatgtttgtaa 55562950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 1859405 - 1859355
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||| |||||||||| ||  ||||||||||||||||||||||||||    
T  1859405 taaaatcacaggaattaagaaaacggatatttgtattaaagttgtttgtaa 1859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 4036087 - 4036037
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  4036087 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 4036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 5743434 - 5743484
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | |||||||||||||||||||| |||||    
T  5743434 taaaatcacgggaattaagaaagtagatatttgtattaaagttgtctgtaa 5743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25708454 - 25708504
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  25708454 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 25708504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 39144666 - 39144616
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  39144666 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 39144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 52870906 - 52870856
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  52870906 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 52870856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1028776 - 1028731
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||| || |||||||    
T  1028776 tcacgggaattaagatagtggatatttgtattaaatttatttgtaa 1028731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 2406093 - 2406056
Alignment:
Q  198 attaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  2406093 attaagaaaattgatatttgtattatagttgtttgtaa 2406056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 4455320 - 4455275
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||    
T  4455320 tcacggaaattaagatagtggatatttgtattaaaattgtttgtaa 4455275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17609801 - 17609846
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||| ||||||    
T  17609801 tcacgggaattaagatagtgaatatttgtattaaagttgcttgtaa 17609846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 47228507 - 47228552
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||    
T  47228507 tcacggaaattaagatagtgaatatttgtattaaagttgtttgtaa 47228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 47299017 - 47299062
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||| ||||||||||||||||||    
T  47299017 tcacgggaattaagatagtaaatatttatattaaagttgtttgtaa 47299062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 50424637 - 50424678
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||| ||||||||||||||||||||    
T  50424637 gggaattaagatagtggatatgtgtattaaagttgtttgtaa 50424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 6083539 - 6083495
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    ||||||||||||| | | ||||||| |||||||||||||||||||    
T  6083539 acgggaattaagaaagtggatatttatattaaagttgtttgtaag 6083495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 51336046 - 51336006
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||| |||||||||||||||  |||||||||    
T  51336046 ggaattaagataatagatatttgtattaaatatgtttgtaa 51336006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0446 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 10684 - 10620
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacactcccatatatgaagccacatca 303  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||    
T  10684 aaatgttattgacaaactctctgtcaaactctttttaacacaccctcttacatgaagccacatca 10620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 26593544 - 26593589
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  26593544 tcacgggaattaagataatagatatttgtattaaagttgtttgtaa 26593589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9499271 - 9499321
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  9499271 taaaatcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 9499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 20862459 - 20862409
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  20862459 taaaatcacgggaattaagaaaatggatatttgtattaaagttgtttgtaa 20862409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 25130908 - 25130858
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  25130908 taaaatcacgggaattaagaaaatggatatttgtattaaagttgtttgtaa 25130858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 12675202 - 12675247
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  12675202 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 12675247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20656089 - 20656134
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20656089 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 20656134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 22103708 - 22103753
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  22103708 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 22103753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23700564 - 23700609
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  23700564 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 23700609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23719019 - 23719064
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  23719019 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 23719064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 23737475 - 23737520
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  23737475 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 23737520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 25148713 - 25148668
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  25148713 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 25148668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 30040796 - 30040841
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  30040796 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 30040841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 43701436 - 43701391
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  43701436 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 43701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 43868361 - 43868316
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  43868361 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 43868316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 45048801 - 45048846
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  45048801 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 45048846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 46703285 - 46703240
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  46703285 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 46703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 46878218 - 46878263
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  46878218 tcacgggaattaagataaaggatatttgtattaaagttgtttgtaa 46878263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 49126977 - 49127022
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  49126977 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 49127022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 52673445 - 52673400
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  52673445 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 52673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 54107611 - 54107566
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  54107611 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 54107566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 35165742 - 35165786
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgta 234  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  35165742 tcacgggaattaagatagtggatatttgtattaaagttgtttgta 35165786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 1572593 - 1572542
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| |||||| |||||||| ||||||||||| ||||||||||||||||||    
T  1572593 ttaaaatcacggaaattaagaaaattgatatttatattaaagttgtttgtaa 1572542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 21756742 - 21756699
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  21756742 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 21756699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 45746034 - 45745991
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  45746034 acgggaattaagatagtagatatttgtattaaagttgtttgtaa 45745991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 52059019 - 52059070
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  52059019 ttaaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 52059070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17591320 - 17591370
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  17591320 taaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 17591370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 26221551 - 26221501
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||||| |  |||||||||||||||||||||||||    
T  26221551 taaaatcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 26221501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 44544044 - 44543994
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  44544044 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 44543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 50647719 - 50647769
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  50647719 taaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 50647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 1641879 - 1641924
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  1641879 tcacgggaattaagatagtagatatttatattaaagttgtttgtaa 1641924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 7051499 - 7051544
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||    
T  7051499 tcacgggaattaagatagtgggtatttgtattaaagttgtttgtaa 7051544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 7181608 - 7181563
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||||   ||||||||||||||||||||||||||    
T  7181608 tcacgggaattaagataggggatatttgtattaaagttgtttgtaa 7181563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 20849090 - 20849045
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||| |||| | ||||||||||||||||||||||||||    
T  20849090 tcacgggaattaggatagtggatatttgtattaaagttgtttgtaa 20849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 31531190 - 31531235
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  31531190 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 31531235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32467683 - 32467638
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  32467683 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 32467638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45253031 - 45252986
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  45253031 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 45252986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 54604367 - 54604412
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  54604367 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 54604412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 7251066 - 7251106
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  7251066 ggaattaagatagtggatatttgtattaaagttgtttgtaa 7251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 14759090 - 14759047
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  14759090 acgggaattaagataatggatatttgtattaaatatgtttgtaa 14759047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 21459238 - 21459195
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  21459238 acgggaattaagataatggatatttgtattaaatatgtttgtaa 21459195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 25916658 - 25916615
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
T  25916658 acgggaattaagaaagtggatatttgtattaaagttgtttgtaa 25916615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 26058790 - 26058751
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  26058790 gaattaagatattggatatttgtattaaagttgtttgtaa 26058751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 37728976 - 37728925
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  37728976 ttaaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 37728925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 39952526 - 39952483
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
T  39952526 acgggaattaagaaagtggatatttgtattaaagttgtttgtaa 39952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 42801563 - 42801606
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  42801563 acgggaattaagataatggatatttgtattaaatatgtttgtaa 42801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 54430957 - 54431000
Alignment:
Q  240 aatgctattgacaaactctctgtcaaactctttttaacacactc 283  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  54430957 aatgctaaggacaaactctctgtcacactctttttaacacactc 54431000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 54782698 - 54782741
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |  |||||||||||||||||||||||||    
T  54782698 acgggaattaagatagtgaatatttgtattaaagttgtttgtaa 54782741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 7462875 - 7462921
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||    
T  7462875 taaaatcacgggaattaagaaagtggatatttgtattaaagttgttt 7462921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9780014 - 9780064
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  9780014 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 9780064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 26806155 - 26806205
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  26806155 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 26806205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 33868710 - 33868660
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  33868710 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 33868660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 36005766 - 36005716
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  36005766 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 36005716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 36099226 - 36099176
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | |||| |||||||||||||||||||||    
T  36099226 taaaatcacgggaattaagaaagtggataattgtattaaagttgtttgtaa 36099176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 36317431 - 36317480
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  36317431 taaaatcacgggaattaaga-agtggatatttgtattaaagttgtttgtaa 36317480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 54431812 - 54431770
Alignment:
Q  240 aatgctattgacaaactctctgtcaaactctttttaacacact 282  Q
    |||||||| |||||||||||||||| ||||||||| |||||||    
T  54431812 aatgctatggacaaactctctgtcacactctttttgacacact 54431770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 32569247 - 32569210
Alignment:
Q  198 attaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  32569247 attaagatagtggatatttgtattaaagttgtttgtaa 32569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 32962884 - 32962929
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||||| |  |||||||||||||||||||||||||    
T  32962884 tcacaggaattaagatagtgaatatttgtattaaagttgtttgtaa 32962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 53164417 - 53164376
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |||||||||||||||  |||||||||    
T  53164417 gggaattaagataatggatatttgtattaaatatgtttgtaa 53164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 25148903 - 25148943
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttg 232  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  25148903 acgggaattaagatagtgaatatttgtattaaagttgtttg 25148943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 43408234 - 43408266
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaa 224  Q
    ||||||||||||||| |||||||||||||||||    
T  43408234 acgggaattaagatagttgatatttgtattaaa 43408266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 48887727 - 48887771
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    ||||||||||||||| | |||||||||||||||  ||||||||||    
T  48887727 acgggaattaagatagtggatatttgtattaaatatgtttgtaag 48887771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16669884 - 16669839
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  16669884 tcacgggaattaagatagttgatatttgtattaaagttgtttgtaa 16669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 34062439 - 34062489
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  34062439 taaaatcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 34062489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 5664896 - 5664851
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  5664896 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 5664851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8716671 - 8716716
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8716671 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 8716716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 15404487 - 15404532
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  15404487 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 15404532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 20252468 - 20252423
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20252468 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 20252423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20727637 - 20727682
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  20727637 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 20727682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 25624987 - 25624942
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  25624987 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 25624942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32121202 - 32121157
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  32121202 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 32121157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34883627 - 34883672
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  34883627 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 34883672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 36130807 - 36130852
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  36130807 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 36130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 8990460 - 8990417
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  8990460 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 8990417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16108249 - 16108300
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  16108249 ttaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 16108300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 37229696 - 37229653
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  37229696 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 37229653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 4711989 - 4711939
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||| ||||||||||||| | ||||||||||||||||||||||||||    
T  4711989 taaaatcatgggaattaagatactggatatttgtattaaagttgtttgtaa 4711939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23789231 - 23789181
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  23789231 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 23789181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1943832 - 1943787
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  1943832 tcacgtgaattaagatagtggatatttgtattaaagttgtttgtaa 1943787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 36021033 - 36021074
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  36021033 gggaattaagatagtggatatttgtattaaagttgtttgtaa 36021074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 40680985 - 40680940
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||    
T  40680985 tcacgggaattaagatggtggatatttgtattaaagttgtttgtaa 40680940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 41450774 - 41450729
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||    
T  41450774 tcacaggaattaagatagtggatatttgtattaaagttgtttgtaa 41450729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 42629622 - 42629577
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  42629622 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 42629577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 44436264 - 44436309
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  44436264 tcacgggaattaagatagtgtatatttgtattaaagttgtttgtaa 44436309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45474573 - 45474528
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  45474573 tcacgtgaattaagatagtggatatttgtattaaagttgtttgtaa 45474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 15227932 - 15227975
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  15227932 acgggaattaagataatggatatttgtattaaatatgtttgtaa 15227975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 26334666 - 26334709
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |||||||||||||||||  |||||||||    
T  26334666 acgggaattaagatagttgatatttgtattaaatatgtttgtaa 26334709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 8841432 - 8841482
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  8841432 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 8841482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9697916 - 9697966
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  9697916 taaaatcacgggaattaagaaatcggatatttgtattaaagttgtttgtaa 9697966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 13197427 - 13197469
Alignment:
Q  193 cgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||| | ||||||||||||||| ||||||||||    
T  13197427 cgggaattaagatagtggatatttgtattaaacttgtttgtaa 13197469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16456647 - 16456697
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  16456647 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 16456697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17408069 - 17408119
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  17408069 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 17408119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22897653 - 22897603
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  22897653 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 22897603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23083760 - 23083710
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||| ||||||||||||    
T  23083760 taaaatcacgggaattaagaaagtggatatttgtattagagttgtttgtaa 23083710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39833774 - 39833824
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  39833774 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 39833824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 3670257 - 3670302
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||    
T  3670257 tcacggaaattaagatagtgaatatttgtattaaagttgtttgtaa 3670302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 41004197 - 41004156
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgt 233  Q
    ||||||||||||||||| |||||||||||||||  |||||||    
T  41004197 acgggaattaagataatggatatttgtattaaatatgtttgt 41004156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 7455850 - 7455886
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttg 232  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  7455850 gaattaagaaaattgatatttatattaaagttgtttg 7455886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 10071848 - 10071891
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  10071848 acgggaattaagaaaattgatatttgtattaaagttgtttgtaa 10071891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23320918 - 23320868
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  23320918 taaaatcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 23320868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 1275512 - 1275557
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  1275512 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 1275557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 6387583 - 6387538
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  6387583 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 6387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 7703600 - 7703645
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  7703600 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 7703645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8291161 - 8291116
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8291161 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 8291116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8612354 - 8612399
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8612354 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 8612399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25247470 - 25247515
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  25247470 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 25247515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 26255353 - 26255308
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  26255353 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 26255308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 29642923 - 29642968
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  29642923 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 29642968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 32814691 - 32814646
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  32814691 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 32814646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 33858646 - 33858691
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  33858646 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 33858691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 34978856 - 34978901
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  34978856 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 34978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 36646416 - 36646461
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  36646416 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 36646461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 39871392 - 39871437
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  39871392 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 39871437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 41025875 - 41025920
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  41025875 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 41025920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 41252141 - 41252186
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  41252141 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 41252186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 49110806 - 49110851
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  49110806 tcacggaaattaagaaaattgatatttgtattaaagttgtttgtaa 49110851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 2006732 - 2006688
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  2006732 cacgggaattaagatagtggatatttgtattaaagttgtttgtaa 2006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 36697911 - 36697955
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  36697911 cacgggaattaagatagtggatatttgtattaaagttgtttgtaa 36697955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 7449524 - 7449481
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  7449524 acgggaattaagatagtagatatttgtattaaagttgtttgtaa 7449481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 29285818 - 29285861
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  29285818 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 29285861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 32872156 - 32872199
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  32872156 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 32872199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 21295413 - 21295363
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  21295413 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 21295363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 34012293 - 34012343
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  34012293 taaaatcacgggaattaagaaagtagatatttgtattaaagttgtttgtaa 34012343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 34896120 - 34896070
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||    
T  34896120 taaaatcacgggaattaagaaaataaatatttgtattaaagttgtttgtaa 34896070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 17327129 - 17327084
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||    
T  17327129 tcacgggaattaagatagtggatatttgtattaaggttgtttgtaa 17327084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 17491773 - 17491732
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  17491773 tcacgggaattaagatagtggatatttgtattaaagttgttt 17491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 17561441 - 17561482
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  17561441 tcacgggaattaagatagtggatatttgtattaaagttgttt 17561482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 31200143 - 31200188
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  31200143 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 31200188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 39197976 - 39197931
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  39197976 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 39197931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 40300488 - 40300443
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  40300488 tcacgggaattaagatagtgaatatttgtattaaagttgtttgtaa 40300443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 44547684 - 44547639
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  44547684 tcacgggaattaagatagtggatatttatattaaagttgtttgtaa 44547639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 7400388 - 7400344
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | |||||||| |||||||||||||||||    
T  7400388 cacgggaattaagatagtggatatttgcattaaagttgtttgtaa 7400344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 9036703 - 9036754
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  9036703 ttaaaatcacgggaattaagaaagtgtatatttgtattaaagttgtttgtaa 9036754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 9303912 - 9303861
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    |||| ||||||||||||||| | | ||||||| |||||||||||||||||||    
T  9303912 taaaatcacgggaattaagaaagtggatatttatattaaagttgtttgtaag 9303861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 10538917 - 10538955
Alignment:
Q  197 aattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  10538917 aattaagaaagttgatatttgtattaaagttgtttgtaa 10538955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 29064236 - 29064278
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttg 232  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  29064236 tcacgggaattaagatagtgaatatttgtattaaagttgtttg 29064278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 29177027 - 29177077
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  29177027 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 29177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 36711073 - 36711123
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| |||||| |||||| ||| | ||||||||||||||||||||||||||    
T  36711073 taaaatcacggtaattaaaatagtggatatttgtattaaagttgtttgtaa 36711123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 38428409 - 38428359
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  38428409 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 38428359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 47534678 - 47534728
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||| ||||||||| | | ||||||||||||||||||||||||||    
T  47534678 taaaatcacgagaattaagaaagtggatatttgtattaaagttgtttgtaa 47534728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 31458255 - 31458210
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||    
T  31458255 tcacgggaattaagatagtggatgtctgtattaaagttgtttgtaa 31458210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 48521284 - 48521239
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||| ||||||||| |||||||    
T  48521284 tcacgggaattaagatagtggatatttgcattaaagttatttgtaa 48521239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 18112955 - 18112991
Alignment:
Q  199 ttaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||| | ||||||||||||||||||||||||||    
T  18112955 ttaagatagtggatatttgtattaaagttgtttgtaa 18112991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 41002939 - 41002979
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||| | | ||||||||||||||||||||||||||    
T  41002939 ggaattaagaaagtggatatttgtattaaagttgtttgtaa 41002979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 4077 - 4122
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  4077 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 4122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8475 - 8430
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8475 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 8430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 9533 - 9578
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  9533 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 9578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 31466 - 31511
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  31466 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 31511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 61632 - 61677
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  61632 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 61677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 50874 - 50919
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  50874 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 50919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 4076430 - 4076385
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  4076430 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 4076385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 5268226 - 5268181
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  5268226 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 5268181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 7758708 - 7758753
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  7758708 tcacgggaattaagataatggatagttgtattaaagttgtttgtaa 7758753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8251712 - 8251757
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8251712 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 8251757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8948130 - 8948175
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  8948130 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 8948175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18754403 - 18754358
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  18754403 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 18754358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29598482 - 29598437
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  29598482 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 29598437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 32675536 - 32675581
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  32675536 tcacgggaattaagatagtagatatttgtattaaagttgtttgtaa 32675581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 34490775 - 34490730
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  34490775 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 34490730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 35504359 - 35504404
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  35504359 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 35504404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 38183345 - 38183390
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  38183345 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 38183390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 38878979 - 38878934
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  38878979 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 38878934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 41014762 - 41014717
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  41014762 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 41014717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 42598495 - 42598540
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  42598495 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 42598540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 42885428 - 42885383
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  42885428 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 42885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 16117231 - 16117275
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  16117231 cacgggaattaagatagtcgatatttgtattaaagttgtttgtaa 16117275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 16125490 - 16125534
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  16125490 cacgggaattaagatagtcgatatttgtattaaagttgtttgtaa 16125534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 18455977 - 18455933
Alignment:
Q  191 cacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  18455977 cacgggaattaagatagtggatatttgtattaaagttgtttgtaa 18455933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 28191956 - 28191999
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  28191956 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 28191999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 36661707 - 36661750
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  36661707 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 36661750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 1141956 - 1141914
Alignment:
Q  239 aaatgctattgacaaactctctgtcaaactctttttaacacac 281  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  1141956 aaatgttattgacaaattctctgtcaaactctttttaacacac 1141914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 12255357 - 12255307
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  12255357 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 12255307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 12260900 - 12260850
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  12260900 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 12260850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 40530408 - 40530358
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||||    
T  40530408 taaaatcacgggaattaagaaaacggatatttgtattaaagttgtttgtaa 40530358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 44502885 - 44502835
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  44502885 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 44502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 1774600 - 1774555
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||    
T  1774600 tcacgggaattaagatagtggatatatgtattaaagttgtttgtaa 1774555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 8951207 - 8951252
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  8951207 tcacgagaattaagatagtggatatttgtattaaagttgtttgtaa 8951252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16999255 - 16999210
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||    
T  16999255 tcacgggaattaagatagtggatatttgtattaaagttatttgtaa 16999210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 21137109 - 21137068
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  21137109 gggaattaagaaagttgatatttgtattaaagttgtttgtaa 21137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 28579900 - 28579855
Alignment:
Q  186 aaagtcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||    
T  28579900 aaagttacgggaattaagatagtggatatttgtattaaagttgttt 28579855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 34568748 - 34568703
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  34568748 tcacggaaattaagatagtggatatttgtattaaagttgtttgtaa 34568703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 36176882 - 36176923
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgttt 231  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  36176882 tcacgggaattaagatagtggatatttgtattaaagttgttt 36176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 2944055 - 2944098
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |||||||||||||||||  |||||||||    
T  2944055 acgggaattaagatagttgatatttgtattaaatatgtttgtaa 2944098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 11798868 - 11798817
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||    
T  11798868 ttaaaatcatgggaattaagaaaacggatatttgtattaaagttgtttgtaa 11798817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 14699708 - 14699665
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |  |||||||||||||||||||||||||    
T  14699708 acgggaattaagatagtgaatatttgtattaaagttgtttgtaa 14699665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 21652263 - 21652306
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |  |||||||||||||||||||||||||    
T  21652263 acgggaattaagatagtgaatatttgtattaaagttgtttgtaa 21652306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 30140338 - 30140295
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| |||||||||||||||  |||||||||    
T  30140338 acgggaattaagataatggatatttgtattaaatatgtttgtaa 30140295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 39112543 - 39112586
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||| |||| | ||||||||||||||||||||||||||||    
T  39112543 acgggaatgaagaaagttgatatttgtattaaagttgtttgtaa 39112586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 43653977 - 43654028
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  43653977 ttaaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 43654028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 4631328 - 4631378
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||| ||||||||||||||||||    
T  4631328 taaaatcacgggaattaagaaagtggatatttatattaaagttgtttgtaa 4631378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13154190 - 13154140
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  13154190 taaaatcacgggaattaagaaagtgaatatttgtattaaagttgtttgtaa 13154140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 42218126 - 42218168
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttg 232  Q
    ||||||||||||||||| | |||||||||||||||| ||||||    
T  42218126 tcacgggaattaagatagtggatatttgtattaaagatgtttg 42218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 44250894 - 44250944
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  44250894 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 44250944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 33745680 - 33745721
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||| | ||||||||||||||||||||||||||    
T  33745680 gggaaataagatagtggatatttgtattaaagttgtttgtaa 33745721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 2152014 - 2152066
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaag 236  Q
    ||||| ||||| ||||||||| | | ||||||| |||||||||||||||||||    
T  2152014 ttaaaatcacgtgaattaagaaagtggatatttatattaaagttgtttgtaag 2152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 18641161 - 18641201
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||| |||||||||||||||  |||||||||    
T  18641161 ggaattaagataatggatatttgtattaaatatgtttgtaa 18641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 28864292 - 28864332
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||| | | ||||||||||||||||||||||||||    
T  28864292 ggaattaagaaagtggatatttgtattaaagttgtttgtaa 28864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 943416 - 943461
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  943416 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 943461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 16456894 - 16456849
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  16456894 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 16456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 42872113 - 42872158
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  42872113 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 42872158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45336143 - 45336098
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  45336143 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 45336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 45794602 - 45794557
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  45794602 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 45794557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 46075647 - 46075692
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  46075647 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 46075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 47300672 - 47300717
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  47300672 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 47300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 52430953 - 52430998
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  52430953 tcacgggaattaagatagtggatatttgtattaaagttgtttgtaa 52430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 50008264 - 50008307
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  50008264 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 50008307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 2280211 - 2280166
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  2280211 tcacgggaattaagatagtggatatttctattaaagttgtttgtaa 2280166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 11741651 - 11741610
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  11741651 gggaattaagatagtggatatttgtattaaagttgtttgtaa 11741610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11907007 - 11907052
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  11907007 tcacgagaattaagatagtagatatttgtattaaagttgtttgtaa 11907052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 16575871 - 16575916
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||    
T  16575871 tcacgggaattaagatagtggatatttgtattcaagttgtttgtaa 16575916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 30290523 - 30290478
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||||    
T  30290523 tcacgggaattaagatagtggatatttgtattaaaattgtttgtaa 30290478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 36880402 - 36880447
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  36880402 tcacggaaattaagatagtggatatttgtattaaagttgtttgtaa 36880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 50246709 - 50246754
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||||    
T  50246709 tcacgggaattaagatagtggatatttgtattaaaattgtttgtaa 50246754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 18237347 - 18237304
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
T  18237347 acgggaattaagaaagtggatatttgtattaaagttgtttgtaa 18237304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 32169740 - 32169779
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  32169740 gaattaagatagtggatatttgtattaaagttgtttgtaa 32169779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 32906748 - 32906791
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||    
T  32906748 acgggaattaagatagtagatatttgtattaaatttgtttgtaa 32906791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 37951731 - 37951774
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| | | ||||||||||||||||||||||||||    
T  37951731 acgggaattaagaaagtggatatttgtattaaagttgtttgtaa 37951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 44529456 - 44529499
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| |||||||||||||||||  |||||||||    
T  44529456 acgggaattaagatagttgatatttgtattaaatatgtttgtaa 44529499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 50008221 - 50008186
Alignment:
Q  200 taagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||| ||||||||||||||||||||||||||||    
T  50008221 taagatagttgatatttgtattaaagttgtttgtaa 50008186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 896838 - 896876
Alignment:
Q  197 aattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  896838 aattaagataattgatatttgtattaaatatgtttgtaa 896876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 1048027 - 1048077
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  1048027 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 1048077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9202280 - 9202330
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||    
T  9202280 taaaatcacgggaattaagaaagtgtatatttgtattaaagttgtttgtaa 9202330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13698873 - 13698823
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||| ||||||||| | | ||||||||||||||||||||||||||    
T  13698873 taaaatcacgagaattaagaaagtggatatttgtattaaagttgtttgtaa 13698823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15811007 - 15811057
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  15811007 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 15811057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 30289637 - 30289687
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  30289637 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 30289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39362969 - 39363019
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  39362969 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 39363019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39750156 - 39750206
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  39750156 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 39750206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 44646533 - 44646483
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  44646533 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 44646483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 44649891 - 44649841
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  44649891 taaaatcacgggaattaagaaagcagatatttgtattaaagttgtttgtaa 44649841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 47263720 - 47263670
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||| ||||||||| | | ||||||||||||||||||||||||||    
T  47263720 taaaatcacgagaattaagaaagtggatatttgtattaaagttgtttgtaa 47263670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 49907276 - 49907234
Alignment:
Q  193 cgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||| |  |||||||||||||||||||||||||    
T  49907276 cgggaattaagatagtgaatatttgtattaaagttgtttgtaa 49907234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 8104073 - 8104114
Alignment:
Q  194 gggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||| |  |||||||||||||||||||||||||    
T  8104073 gggaattaagatagtgaatatttgtattaaagttgtttgtaa 8104114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 27531011 - 27530958
Alignment:
Q  182 tattaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||| ||||||||||||||| | | |||| ||||||||||||| |||||||    
T  27531011 tattaaaatcacgggaattaagaaagtagataattgtattaaagttatttgtaa 27530958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 47296346 - 47296391
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||| |||||| ||||||||| |||||||||    
T  47296346 tcacgagaattaagataatcgatattggtattaaagatgtttgtaa 47296391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 9413624 - 9413588
Alignment:
Q  196 gaattaagataattgatatttgtattaaagttgtttg 232  Q
    |||||| || |||||||||||||||||||||||||||    
T  9413624 gaattatgaaaattgatatttgtattaaagttgtttg 9413588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 27974940 - 27974980
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  27974940 ggaattaagatagtgaatatttgtattaaagttgtttgtaa 27974980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 37585204 - 37585164
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||||| |||||||||||||||  |||||||||    
T  37585204 ggaattaagataatagatatttgtattaaacatgtttgtaa 37585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 48854069 - 48854029
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||||| |||||||||||||||||  |||||||||    
T  48854069 ggaattaagatagttgatatttgtattaaatatgtttgtaa 48854029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 12327 - 12276
Alignment:
Q  184 ttaaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  12327 ttaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 12276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 51463 - 51506
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  51463 acgggaattaagatagtggatatttgtattaaagttgtttgtaa 51506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 47902 - 47852
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||||||    
T  47902 taaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaa 47852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 24411 - 24456
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  24411 tcacgggaattaagatagtggatatttatattaaagttgtttgtaa 24456  T

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Target: scaffold0308 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 5067 - 5110
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | |||||||||||||||| |||||||||    
T  5067 acgggaattaagatagtggatatttgtattaaagctgtttgtaa 5110  T

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Target: scaffold0308; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 14130 - 14173
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    ||||||||||||||| | |||||||||||||||| |||||||||    
T  14130 acgggaattaagatagtggatatttgtattaaagatgtttgtaa 14173  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 65413 - 65463
Alignment:
Q  185 taaagtcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||| ||||||||||||||| |   ||||||||||||||||||||||||||    
T  65413 taaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaa 65463  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 6919 - 6964
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||    
T  6919 tcacggaaattaagatagtgaatatttgtattaaagttgtttgtaa 6964  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 48909 - 48868
Alignment:
Q  192 acgggaattaagataattgatatttgtattaaagttgtttgt 233  Q
    ||||||||||||||||| |||||||||||||||  |||||||    
T  48909 acgggaattaagataatagatatttgtattaaatatgtttgt 48868  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 258901 - 258946
Alignment:
Q  190 tcacgggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||| |||||||||| |  |||||||||||||||||||||||||    
T  258901 tcacggaaattaagatagtgaatatttgtattaaagttgtttgtaa 258946  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 118098 - 118058
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  118098 ggaattaagaaaacggatatttgtattaaagttgtttgtaa 118058  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 17502 - 17542
Alignment:
Q  195 ggaattaagataattgatatttgtattaaagttgtttgtaa 235  Q
    |||||||||| ||| |||||||| |||||||||||||||||    
T  17502 ggaattaagaaaatggatatttgcattaaagttgtttgtaa 17542  T

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