View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20082_low_30 (Length: 266)
Name: NF20082_low_30
Description: NF20082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20082_low_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 27 - 266
Target Start/End: Complemental strand, 37216477 - 37216238
Alignment:
| Q |
27 |
caacattcaatctttgcacggtgaaagtatttgtcaatttgcaaaaaccaataacagtcttatccttacaattttgaggatcaatttgcctatttgctgg |
126 |
Q |
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| T |
37216477 |
caacattcaatctttgcacggtgaaagtatttgtcaatttgcaaaaaccaataacagtcttatccttacaattttgaggatcaatttgcctatttgctgg |
37216378 |
T |
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| Q |
127 |
tttgtacaaattacttgaactcttccctttacaaatctttgaaaacataatggaaaacagtaacatttttgcaatcaaaagtaaaaacagaaaacgtttt |
226 |
Q |
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| T |
37216377 |
tttgtacaaattacttgaactcttccctttacaaatctttgaaaacataatggaaaacagtaacatttttgcaatcaaaagtaaaaacagaaaacgtttt |
37216278 |
T |
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| Q |
227 |
ctaaatccagacagaccaataaaaaataatgaaggagcaa |
266 |
Q |
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| T |
37216277 |
ctaaatccagacagaccaataaaaaataatgaaggagcaa |
37216238 |
T |
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