View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20083_high_24 (Length: 322)

Name: NF20083_high_24
Description: NF20083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20083_high_24
NF20083_high_24
[»] chr7 (5 HSPs)
chr7 (8-305)||(7190210-7190504)
chr7 (8-107)||(8839327-8839426)
chr7 (8-107)||(29059801-29059900)
chr7 (8-107)||(31492099-31492198)
chr7 (8-97)||(2657892-2657981)
[»] chr1 (3 HSPs)
chr1 (8-87)||(29124741-29124820)
chr1 (21-97)||(45806245-45806321)
chr1 (8-104)||(22022116-22022212)
[»] chr8 (5 HSPs)
chr8 (11-107)||(15682928-15683024)
chr8 (8-97)||(12958141-12958230)
chr8 (8-97)||(2743929-2744018)
chr8 (8-107)||(19715772-19715871)
chr8 (8-60)||(30936000-30936052)
[»] chr6 (4 HSPs)
chr6 (8-87)||(12411144-12411223)
chr6 (8-102)||(25084030-25084124)
chr6 (21-98)||(28099252-28099329)
chr6 (8-70)||(21910201-21910263)
[»] chr3 (3 HSPs)
chr3 (8-107)||(25224695-25224794)
chr3 (8-56)||(28967279-28967327)
chr3 (8-60)||(40294608-40294660)
[»] chr2 (4 HSPs)
chr2 (8-97)||(31579285-31579374)
chr2 (8-97)||(12133286-12133375)
chr2 (8-107)||(5394393-5394491)
chr2 (8-107)||(44732619-44732718)
[»] chr4 (7 HSPs)
chr4 (8-107)||(31307112-31307211)
chr4 (8-87)||(38844234-38844313)
chr4 (46-97)||(51626362-51626413)
chr4 (8-66)||(25712503-25712561)
chr4 (8-97)||(38766085-38766174)
chr4 (23-107)||(35972354-35972438)
chr4 (39-107)||(46016176-46016244)
[»] scaffold0182 (1 HSPs)
scaffold0182 (21-107)||(26340-26426)
[»] chr5 (2 HSPs)
chr5 (8-97)||(10591923-10592012)
chr5 (26-106)||(18909348-18909428)


Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 8 - 305
Target Start/End: Complemental strand, 7190504 - 7190210
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| || || ||||||||| ||||| | |||| ||||||| |||| ||| ||||||||| |||||||||||||||||||| ||||||||| |||||    
T  7190504 tgagatggaataaatctcttctagcttaaccaaggttatgagtttgaattcagcattgggcatgcagccgtgttaaaacttttagggagaacttaccgcc 7190405  T
Q  108 aaagagaagacgacgcttattatatgttgtttttgtaaccttttaatatgttacgtggttgttatcatatgaaaccctaacaagttttgcgtgttattgt 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||    
T  7190404 aaagagaagacgacgcttattatatgttgtttt-gtaaccttttaatatgttatgttgttgttatcatatgaaaccctaacaagttttgcgt--tattgt 7190308  T
Q  208 ttcttctctatgaaaccgctctattggtaaacaagtagatatgctttgcatcaatttcaactataacttctctctcaaatagttacctataattcatg 305  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7190307 ttcttctctatgaaacccctctattggtaaacaagtagatatactttgcatcaatttcaactataacttctctctcaaatagttacctataattcatg 7190210  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 8839426 - 8839327
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||||||||||  |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| | ||||||||| ||| ||||||  |||||||    
T  8839426 tgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagaatctgccgcc 8839327  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 29059801 - 29059900
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| |||  |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  29059801 tgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 29059900  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 31492099 - 31492198
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| |||  |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  31492099 tgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 31492198  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 2657981 - 2657892
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| ||| ||||||||||||||||||| ||| | ||||||| ||| |||  |||||||| ||||   ||||||||| ||| |||||    
T  2657981 tgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactcttaaggaga 2657892  T

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Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 29124741 - 29124820
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaact 87  Q
    ||||||||||| ||||||||||| ||||| |  |||||||||||||||||||| ||||||||| |||| | |||||||||    
T  29124741 tgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaact 29124820  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 45806245 - 45806321
Alignment:
Q  21 gtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    |||||||||| ||||| | ||||| ||||||||||| |||| |||||||| |||| || |||||||| ||| |||||    
T  45806245 gtctcttctatcttaaccaaggtcctgagttcgaattcagtcttgggcatgcagcagttttaaaactcttagggaga 45806321  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 22022116 - 22022212
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgcc 104  Q
    ||||||| |||| |||||||||| |||||   ||||  || ||||||||||||  |||||||| |||| |  |||||||| ||| ||||||||||||    
T  22022116 tgagatggaacaggtctcttctagcttaactaaggttgtgggttcgaatccagccttgggcatgcagcagcattaaaactcttagggagaacttgcc 22022212  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 15682928 - 15683024
Alignment:
Q  11 gatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||| ||| ||||||||||| ||||||| ||||| |||||||||||||||  |||||||| |||| | ||||||||| ||| ||||| | |||||||    
T  15682928 gatggaacgagtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagagcctgccgcc 15683024  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 12958230 - 12958141
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| ||| ||||||||||| ||||| | |||||||| ||| |||||||| ||||||||| |||| | ||||||||| ||| |||||    
T  12958230 tgagatggaactagtctcttctagcttaaccaaggtcatgggtttgaatccagcattgggcatgcagcagcgttaaaactcttagggaga 12958141  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 2743929 - 2744018
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| |||  |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| |||||    
T  2743929 tgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggaga 2744018  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 19715871 - 19715772
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| |||| |||| ||||| ||||| | ||||| || ||||||||||||  |||||||| |||| | ||||||||| | | ||||| |||||||||    
T  19715871 tgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactctcagggagagcttgccgcc 19715772  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 30936000 - 30936052
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccag 60  Q
    ||||||| |||  |||||||||||||||| | ||||| |||||||||||||||    
T  30936000 tgagatggaacgggtctcttctaacttaaccaaggtcctgagttcgaatccag 30936052  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 12411144 - 12411223
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaact 87  Q
    ||||||| |||| |||||||||||||||| | ||||| |||||||||||||||  |||||||| |||| | |||||||||    
T  12411144 tgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaact 12411223  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 25084030 - 25084124
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttg 102  Q
    |||||||| |||||||||||||| ||||||| | ||| ||||||||||| |||| |||| ||| ||||  |||||||||| ||| ||||| ||||    
T  25084030 tgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactcttagggagagcttg 25084124  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 28099252 - 28099329
Alignment:
Q  21 gtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaa 98  Q
    |||||||||| |||||   ||||| || ||||||||||||  |||||||| |||| ||||||||||||||| ||||||    
T  28099252 gtctcttctaccttaactaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagaa 28099329  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 21910201 - 21910263
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcat 70  Q
    ||||||||||||||||||||||| ||||| | || || || ||||||||||||  ||||||||    
T  21910201 tgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcat 21910263  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 25224695 - 25224794
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||||||||||  |||||||||| ||||| | ||||| || ||||||||| ||| ||||| || |||| | ||||||||| ||| |||||||||||||||    
T  25224695 tgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactcttaaggagaacttgccgcc 25224794  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 28967327 - 28967279
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaat 56  Q
    |||||||| || ||||||||||||||||| | |||||||| ||||||||    
T  28967327 tgagatgacacgagtctcttctaacttaaccaaggtcatgtgttcgaat 28967279  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 40294608 - 40294660
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccag 60  Q
    |||||||| || |||||| |||| ||||||| ||||| |||||||||||||||    
T  40294608 tgagatgacacgagtctcctctaccttaatcaaggtcctgagttcgaatccag 40294660  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 31579374 - 31579285
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| |||  |||||||||| ||||||| ||||| || ||||||||||||  |||||||| || | ||||||||||||||| |||||    
T  31579374 tgagatgtaacgggtctcttctagcttaatcaaggtcttgggttcgaatccagccttgggcatgcaacagtgttaaaacttttagggaga 31579285  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 12133375 - 12133286
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| ||||||||||||  |||| ||| ||||   ||||||||| ||| |||||    
T  12133375 tgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactcttagggaga 12133286  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 5394393 - 5394491
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| ||| ||||||||||| ||||| | ||||| || ||||||||||||  |||||||| ||| | |||||||||| ||| ||||| | |||||||    
T  5394393 tgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcag-catgttaaaactcttagggagagcctgccgcc 5394491  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 44732718 - 44732619
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| |||  ||||||| || ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  44732718 tgagatggaacgggtctcttatagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 44732619  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 31307211 - 31307112
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    ||||||| |||  |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  31307211 tgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 31307112  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 38844313 - 38844234
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaact 87  Q
    ||||||| ||| ||||||||||| ||||| | |||||||||||||||||||||  |||||||| || | | |||||||||    
T  38844313 tgagatggaacgagtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaact 38844234  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 51626413 - 51626362
Alignment:
Q  46 tgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    |||||||||||||||  |||||||| |||| ||||||||||||||| |||||    
T  51626413 tgagttcgaatccagccttgggcatgcagcagtgttaaaacttttagggaga 51626362  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25712561 - 25712503
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgg 66  Q
    |||||||| ||||||||| |||| ||||| | ||||||||| |||||||||||| ||||    
T  25712561 tgagatgatacaagtctcctctagcttaaacaaggtcatgaattcgaatccagtcttgg 25712503  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 38766085 - 38766174
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| ||| ||||||||||| ||||| | ||||| || ||| ||||||||  |||||||| |||| | ||||||||| ||| |||||    
T  38766085 tgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactcttagggaga 38766174  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 35972354 - 35972438
Alignment:
Q  23 ctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||||||| ||||| | ||||| || ||||||||||||   |||||||||||| | ||||||||| ||| |||||  ||||||||    
T  35972354 ctcttctagcttaaccaaggtcttgggttcgaatccagccatgggcatacagcagcgttaaaactattagggagagtttgccgcc 35972438  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 46016176 - 46016244
Alignment:
Q  39 taggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  46016176 taggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 46016244  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 26340 - 26426
Alignment:
Q  21 gtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgcc 107  Q
    |||||||||| ||||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| ||||| | |||||||    
T  26340 gtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcc 26426  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 10591923 - 10592012
Alignment:
Q  8 tgagatgaaacaagtctcttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggaga 97  Q
    ||||||| |||  ||||||||||  |||| | ||||| || ||||||||||||  |||||||| |||| ||||||||||| ||| |||||    
T  10591923 tgagatggaacgggtctcttctagattaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggaga 10592012  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 18909428 - 18909348
Alignment:
Q  26 ttctaacttaatctaggtcatgagttcgaatccagtattgggcatacagccgtgttaaaacttttacggagaacttgccgc 106  Q
    ||||| ||||||| ||||| |  ||||||||||||  ||||| || |||| ||||||||||| ||| |||||| |||||||    
T  18909428 ttctagcttaatcaaggtcctaggttcgaatccagccttgggtatgcagcagtgttaaaactcttagggagaatttgccgc 18909348  T

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