View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20083_low_1 (Length: 633)

Name: NF20083_low_1
Description: NF20083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20083_low_1
NF20083_low_1
[»] chr7 (57 HSPs)
chr7 (19-614)||(29157600-29158180)
chr7 (19-167)||(11845226-11845373)
chr7 (19-168)||(37533339-37533487)
chr7 (19-168)||(1085591-1085739)
chr7 (21-166)||(7517617-7517762)
chr7 (19-168)||(37532986-37533133)
chr7 (21-154)||(45433278-45433411)
chr7 (19-143)||(23376-23500)
chr7 (379-614)||(29161609-29161844)
chr7 (21-155)||(22567026-22567160)
chr7 (19-131)||(19122766-19122878)
chr7 (19-131)||(36939744-36939856)
chr7 (21-131)||(40094785-40094895)
chr7 (23-168)||(8128415-8128560)
chr7 (19-143)||(6054595-6054719)
chr7 (21-153)||(30244307-30244439)
chr7 (19-131)||(45754750-45754862)
chr7 (19-110)||(7554060-7554151)
chr7 (198-308)||(29161362-29161472)
chr7 (21-116)||(24177472-24177567)
chr7 (21-104)||(30245114-30245197)
chr7 (21-91)||(22566713-22566783)
chr7 (21-131)||(45434673-45434783)
chr7 (511-611)||(29206677-29206777)
chr7 (28-152)||(30032611-30032735)
chr7 (21-104)||(16569233-16569316)
chr7 (21-104)||(16596346-16596429)
chr7 (21-140)||(34218036-34218155)
chr7 (19-101)||(14681545-14681627)
chr7 (21-166)||(118277-118422)
chr7 (43-163)||(37167840-37167960)
chr7 (21-140)||(9901681-9901799)
chr7 (508-614)||(29144943-29145049)
chr7 (26-104)||(30253534-30253612)
chr7 (30-166)||(28300229-28300366)
chr7 (21-116)||(24838727-24838823)
chr7 (19-155)||(47129130-47129265)
chr7 (19-110)||(1085280-1085371)
chr7 (65-155)||(47129450-47129539)
chr7 (21-105)||(40230328-40230412)
chr7 (21-152)||(41854671-41854802)
chr7 (21-101)||(36534825-36534905)
chr7 (21-72)||(28301613-28301664)
chr7 (19-141)||(36622995-36623117)
chr7 (21-79)||(41910657-41910715)
chr7 (21-131)||(20599351-20599463)
chr7 (51-102)||(21416181-21416232)
chr7 (85-155)||(30253671-30253741)
chr7 (23-105)||(43241534-43241616)
chr7 (53-101)||(23569043-23569091)
chr7 (21-57)||(30245531-30245567)
chr7 (21-57)||(30255376-30255412)
chr7 (21-52)||(36109007-36109038)
chr7 (51-102)||(36675651-36675702)
chr7 (85-155)||(30244453-30244523)
chr7 (67-131)||(28300579-28300644)
chr7 (21-54)||(30244738-30244771)
[»] chr5 (59 HSPs)
chr5 (19-168)||(6500485-6500634)
chr5 (19-164)||(6500857-6501002)
chr5 (19-147)||(40296310-40296438)
chr5 (19-155)||(27502023-27502159)
chr5 (21-145)||(41632819-41632943)
chr5 (19-166)||(18603097-18603243)
chr5 (21-131)||(26074649-26074759)
chr5 (19-155)||(3295002-3295138)
chr5 (19-143)||(3295344-3295467)
chr5 (21-168)||(25327972-25328119)
chr5 (19-104)||(9498692-9498777)
chr5 (21-166)||(36492195-36492338)
chr5 (20-128)||(13415774-13415882)
chr5 (19-143)||(41170669-41170793)
chr5 (21-152)||(34753015-34753146)
chr5 (10-152)||(15370125-15370267)
chr5 (21-155)||(15370439-15370573)
chr5 (21-154)||(6224233-6224366)
chr5 (19-166)||(42405574-42405719)
chr5 (21-167)||(1028492-1028638)
chr5 (21-131)||(26074157-26074267)
chr5 (21-168)||(299526-299674)
chr5 (19-167)||(624231-624379)
chr5 (19-131)||(33747806-33747918)
chr5 (19-144)||(32487429-32487553)
chr5 (19-131)||(11416988-11417100)
chr5 (21-131)||(26075172-26075283)
chr5 (21-166)||(36568545-36568688)
chr5 (19-116)||(29549281-29549378)
chr5 (24-154)||(24489194-24489322)
chr5 (21-131)||(26590921-26591031)
chr5 (25-142)||(35150048-35150164)
chr5 (19-131)||(12662663-12662775)
chr5 (21-131)||(38427585-38427694)
chr5 (21-153)||(2411044-2411176)
chr5 (71-143)||(38427306-38427378)
chr5 (21-121)||(41635212-41635312)
chr5 (19-168)||(623853-624000)
chr5 (21-120)||(26074803-26074903)
chr5 (51-102)||(13042606-13042657)
chr5 (27-102)||(13786041-13786116)
chr5 (23-121)||(5723812-5723910)
chr5 (28-118)||(36522261-36522351)
chr5 (41-102)||(36527135-36527196)
chr5 (21-110)||(300996-301077)
chr5 (21-145)||(35914886-35915010)
chr5 (70-152)||(26900007-26900089)
chr5 (21-143)||(35167837-35167959)
chr5 (21-79)||(42508649-42508707)
chr5 (23-64)||(26074357-26074398)
chr5 (51-98)||(13112604-13112651)
chr5 (26-91)||(36521947-36522012)
chr5 (68-116)||(795258-795306)
chr5 (23-59)||(7768889-7768925)
chr5 (38-118)||(9510544-9510624)
chr5 (21-109)||(19275566-19275653)
chr5 (86-129)||(24489583-24489626)
chr5 (42-120)||(32445943-32446021)
chr5 (63-96)||(41340358-41340391)
[»] chr6 (46 HSPs)
chr6 (23-168)||(16454614-16454758)
chr6 (19-168)||(29518538-29518686)
chr6 (19-167)||(32741214-32741361)
chr6 (19-166)||(29518955-29519101)
chr6 (19-168)||(35210239-35210386)
chr6 (19-143)||(1846783-1846907)
chr6 (19-131)||(3409294-3409406)
chr6 (21-131)||(16107715-16107825)
chr6 (21-155)||(16454944-16455078)
chr6 (19-153)||(3415493-3415629)
chr6 (21-153)||(10074352-10074484)
chr6 (21-143)||(2578442-2578564)
chr6 (19-144)||(3058261-3058386)
chr6 (19-143)||(3409695-3409819)
chr6 (19-131)||(1127395-1127507)
chr6 (19-143)||(2378161-2378285)
chr6 (21-168)||(2377791-2377937)
chr6 (21-168)||(2579848-2579993)
chr6 (21-155)||(2578822-2578956)
chr6 (21-155)||(5832015-5832147)
chr6 (21-154)||(10073604-10073737)
chr6 (21-155)||(2579479-2579613)
chr6 (23-143)||(2843593-2843714)
chr6 (21-142)||(10073991-10074112)
chr6 (21-166)||(593683-593830)
chr6 (19-152)||(14748332-14748461)
chr6 (19-131)||(26544084-26544196)
chr6 (19-91)||(32460631-32460703)
chr6 (26-120)||(6071174-6071268)
chr6 (21-131)||(6999807-6999917)
chr6 (21-103)||(10911603-10911685)
chr6 (21-127)||(1950200-1950306)
chr6 (21-74)||(16108100-16108153)
chr6 (19-109)||(9062383-9062472)
chr6 (26-103)||(8481968-8482045)
chr6 (52-103)||(11637760-11637811)
chr6 (21-168)||(2579085-2579226)
chr6 (26-120)||(12092504-12092598)
chr6 (21-67)||(14789279-14789325)
chr6 (21-100)||(2975589-2975668)
chr6 (21-104)||(5958641-5958724)
chr6 (52-96)||(21130103-21130147)
chr6 (19-57)||(35210513-35210551)
chr6 (88-141)||(16108155-16108208)
chr6 (26-83)||(20848361-20848418)
chr6 (52-96)||(22605301-22605345)
[»] chr8 (73 HSPs)
chr8 (19-155)||(20870560-20870696)
chr8 (19-154)||(3669722-3669857)
chr8 (21-131)||(9482615-9482725)
chr8 (21-166)||(9483163-9483308)
chr8 (19-154)||(30441116-30441255)
chr8 (19-152)||(34835244-34835377)
chr8 (19-168)||(3038263-3038413)
chr8 (19-152)||(34835510-34835643)
chr8 (19-152)||(34835776-34835909)
chr8 (19-131)||(3670095-3670207)
chr8 (19-131)||(18372005-18372117)
chr8 (19-131)||(34834911-34835023)
chr8 (19-154)||(32305512-32305647)
chr8 (21-152)||(40518108-40518239)
chr8 (21-131)||(30359646-30359756)
chr8 (19-121)||(33113388-33113490)
chr8 (19-152)||(40579496-40579629)
chr8 (19-131)||(1014256-1014368)
chr8 (19-131)||(45122068-45122180)
chr8 (19-131)||(45122659-45122771)
chr8 (19-154)||(45121898-45122033)
chr8 (21-114)||(147488-147581)
chr8 (45-142)||(5915928-5916025)
chr8 (19-131)||(37544501-37544613)
chr8 (21-131)||(9608782-9608892)
chr8 (21-142)||(8918764-8918885)
chr8 (21-110)||(30359308-30359397)
chr8 (21-145)||(1513912-1514036)
chr8 (21-152)||(6876852-6876983)
chr8 (21-131)||(25561826-25561937)
chr8 (21-140)||(40518619-40518738)
chr8 (59-153)||(40579258-40579352)
chr8 (21-126)||(70290-70395)
chr8 (19-131)||(1013882-1013994)
chr8 (45-131)||(6651555-6651641)
chr8 (42-131)||(6731953-6732042)
chr8 (21-121)||(9609122-9609222)
chr8 (21-168)||(9309392-9309537)
chr8 (21-100)||(9507819-9507898)
chr8 (21-131)||(43398079-43398192)
chr8 (21-139)||(45121659-45121777)
chr8 (19-140)||(5420686-5420807)
chr8 (62-155)||(41129066-41129159)
chr8 (10-141)||(18380020-18380149)
chr8 (28-154)||(9620666-9620790)
chr8 (44-131)||(32640543-32640630)
chr8 (19-76)||(3037774-3037831)
chr8 (21-116)||(41972195-41972293)
chr8 (19-143)||(45123041-45123165)
chr8 (52-131)||(147888-147967)
chr8 (66-145)||(8919141-8919220)
chr8 (19-131)||(18371672-18371779)
chr8 (21-102)||(27856168-27856249)
chr8 (21-81)||(9309016-9309076)
chr8 (21-97)||(43274824-43274900)
chr8 (26-120)||(4154690-4154782)
chr8 (19-62)||(41416251-41416294)
chr8 (19-69)||(18372676-18372725)
chr8 (19-69)||(18373004-18373054)
chr8 (20-74)||(18373238-18373292)
chr8 (38-120)||(40417738-40417820)
chr8 (19-56)||(18372785-18372822)
chr8 (26-102)||(4154321-4154396)
chr8 (26-120)||(5274817-5274911)
chr8 (69-131)||(12283957-12284019)
chr8 (19-56)||(18372342-18372379)
chr8 (21-57)||(25561729-25561765)
chr8 (23-102)||(8794150-8794229)
chr8 (56-91)||(18829893-18829928)
chr8 (61-120)||(20995438-20995497)
chr8 (26-81)||(40991795-40991850)
chr8 (65-121)||(16524446-16524502)
chr8 (84-155)||(18372270-18372342)
[»] chr2 (63 HSPs)
chr2 (10-153)||(37105950-37106093)
chr2 (21-168)||(42514686-42514832)
chr2 (19-152)||(14745657-14745790)
chr2 (19-168)||(41283449-41283598)
chr2 (19-131)||(36178616-36178728)
chr2 (21-168)||(6421422-6421568)
chr2 (19-154)||(36178159-36178294)
chr2 (10-152)||(5542615-5542757)
chr2 (21-131)||(15880300-15880410)
chr2 (19-140)||(37106223-37106344)
chr2 (19-131)||(5543009-5543121)
chr2 (21-131)||(15511506-15511616)
chr2 (21-143)||(6422147-6422269)
chr2 (21-139)||(36005883-36006001)
chr2 (21-131)||(962635-962745)
chr2 (21-131)||(33731685-33731795)
chr2 (21-131)||(40679640-40679750)
chr2 (24-131)||(28531325-28531432)
chr2 (21-131)||(12529039-12529149)
chr2 (21-155)||(23346274-23346407)
chr2 (21-102)||(28254277-28254358)
chr2 (23-152)||(35580714-35580842)
chr2 (38-166)||(3673122-3673249)
chr2 (21-143)||(6713013-6713136)
chr2 (21-131)||(40163383-40163494)
chr2 (23-141)||(38796619-38796739)
chr2 (21-131)||(1769929-1770039)
chr2 (21-131)||(7598265-7598375)
chr2 (10-104)||(14745332-14745426)
chr2 (26-168)||(30313220-30313360)
chr2 (46-155)||(6421793-6421902)
chr2 (24-128)||(5367495-5367599)
chr2 (19-102)||(16542484-16542567)
chr2 (37-115)||(36784287-36784365)
chr2 (56-165)||(3672773-3672882)
chr2 (21-110)||(40733554-40733643)
chr2 (42-166)||(16590941-16591065)
chr2 (26-118)||(29874047-29874139)
chr2 (19-91)||(36178320-36178392)
chr2 (21-142)||(29676572-29676687)
chr2 (19-72)||(31899496-31899549)
chr2 (19-166)||(37632575-37632720)
chr2 (21-100)||(31259658-31259737)
chr2 (21-131)||(9231286-9231396)
chr2 (21-102)||(37894732-37894813)
chr2 (21-131)||(29676940-29677055)
chr2 (26-101)||(30323506-30323581)
chr2 (26-81)||(31385779-31385834)
chr2 (21-59)||(7598646-7598684)
chr2 (26-91)||(33561502-33561567)
chr2 (26-91)||(33953822-33953887)
chr2 (23-96)||(37895107-37895180)
chr2 (21-73)||(28254181-28254233)
chr2 (26-166)||(29873514-29873653)
chr2 (26-81)||(2336666-2336721)
chr2 (19-91)||(31468801-31468869)
chr2 (46-116)||(6421688-6421758)
chr2 (21-143)||(40733920-40734041)
chr2 (21-62)||(38796298-38796339)
chr2 (26-102)||(41678408-41678483)
chr2 (26-91)||(3594229-3594294)
chr2 (114-166)||(2110014-2110066)
chr2 (48-88)||(35580494-35580534)
[»] chr1 (57 HSPs)
chr1 (19-168)||(44290798-44290948)
chr1 (19-166)||(44290435-44290581)
chr1 (19-144)||(29798234-29798359)
chr1 (23-131)||(34364964-34365072)
chr1 (19-142)||(3537599-3537722)
chr1 (21-166)||(41157028-41157175)
chr1 (21-154)||(17294614-17294748)
chr1 (21-168)||(9955945-9956092)
chr1 (21-127)||(38804370-38804476)
chr1 (19-143)||(14318902-14319026)
chr1 (19-131)||(34364542-34364654)
chr1 (19-166)||(40082442-40082588)
chr1 (21-143)||(41142409-41142532)
chr1 (21-143)||(26661521-26661643)
chr1 (21-131)||(41157412-41157522)
chr1 (21-142)||(5319965-5320086)
chr1 (19-166)||(32168674-32168815)
chr1 (19-144)||(48588486-48588611)
chr1 (19-168)||(50051999-50052146)
chr1 (19-111)||(32594747-32594839)
chr1 (19-131)||(37556147-37556258)
chr1 (19-106)||(3550755-3550842)
chr1 (21-116)||(26661924-26662019)
chr1 (21-168)||(31767136-31767282)
chr1 (19-142)||(41759518-41759641)
chr1 (21-155)||(45084419-45084547)
chr1 (21-151)||(22077101-22077231)
chr1 (21-155)||(37850588-37850721)
chr1 (19-104)||(44043810-44043895)
chr1 (21-153)||(22077484-22077616)
chr1 (21-168)||(66447-66593)
chr1 (21-166)||(5575141-5575284)
chr1 (21-143)||(11977317-11977439)
chr1 (19-169)||(45493948-45494101)
chr1 (21-144)||(39066199-39066321)
chr1 (21-155)||(3875318-3875452)
chr1 (21-143)||(34649475-34649597)
chr1 (19-74)||(41184493-41184548)
chr1 (21-143)||(24600313-24600435)
chr1 (19-131)||(37555765-37555876)
chr1 (31-166)||(45839678-45839813)
chr1 (21-91)||(66138-66209)
chr1 (23-153)||(22077818-22077947)
chr1 (26-131)||(19283466-19283571)
chr1 (19-63)||(3537226-3537270)
chr1 (21-131)||(5528765-5528875)
chr1 (21-131)||(4956228-4956340)
chr1 (26-102)||(10351202-10351278)
chr1 (55-143)||(11977015-11977103)
chr1 (21-131)||(24131999-24132106)
chr1 (21-65)||(21378118-21378162)
chr1 (23-90)||(30630690-30630757)
chr1 (33-74)||(41184156-41184197)
chr1 (21-73)||(44685493-44685546)
chr1 (21-116)||(22793315-22793411)
chr1 (28-91)||(24448321-24448384)
chr1 (54-154)||(50051677-50051776)
[»] chr4 (79 HSPs)
chr4 (19-168)||(25483371-25483519)
chr4 (19-164)||(50630731-50630876)
chr4 (21-165)||(36629274-36629418)
chr4 (19-131)||(54108948-54109059)
chr4 (19-143)||(41370392-41370516)
chr4 (19-151)||(55933113-55933245)
chr4 (19-169)||(54936231-54936379)
chr4 (21-168)||(3340844-3340990)
chr4 (21-168)||(39404055-39404202)
chr4 (19-121)||(4955336-4955438)
chr4 (23-168)||(22028340-22028486)
chr4 (19-131)||(52884730-52884843)
chr4 (19-152)||(54017583-54017716)
chr4 (19-155)||(44620695-44620830)
chr4 (21-168)||(10245957-10246103)
chr4 (24-155)||(22027946-22028077)
chr4 (21-151)||(22183253-22183383)
chr4 (21-139)||(32941124-32941242)
chr4 (21-131)||(50002463-50002573)
chr4 (21-142)||(44620390-44620511)
chr4 (21-142)||(44621039-44621160)
chr4 (21-141)||(1731646-1731766)
chr4 (21-168)||(20825873-20826020)
chr4 (21-140)||(39792860-39792979)
chr4 (24-143)||(43827480-43827598)
chr4 (19-142)||(49076829-49076951)
chr4 (21-131)||(39404435-39404545)
chr4 (21-154)||(36608647-36608780)
chr4 (19-104)||(49880195-49880280)
chr4 (19-131)||(18932758-18932870)
chr4 (22-110)||(45496843-45496931)
chr4 (21-131)||(36572056-36572166)
chr4 (21-131)||(50459758-50459868)
chr4 (21-131)||(49302941-49303053)
chr4 (19-131)||(54108571-54108684)
chr4 (38-144)||(23817677-23817783)
chr4 (19-131)||(54343017-54343122)
chr4 (21-102)||(54741216-54741297)
chr4 (21-141)||(16889535-16889655)
chr4 (19-131)||(20826252-20826364)
chr4 (23-131)||(34004594-34004701)
chr4 (19-102)||(52884922-52885006)
chr4 (21-151)||(4390090-4390220)
chr4 (21-102)||(34646687-34646768)
chr4 (19-91)||(2741106-2741178)
chr4 (19-107)||(6975489-6975577)
chr4 (21-152)||(16888804-16888935)
chr4 (35-131)||(31691203-31691301)
chr4 (21-155)||(2740737-2740869)
chr4 (21-91)||(54017751-54017821)
chr4 (21-142)||(3244449-3244570)
chr4 (21-154)||(3341165-3341298)
chr4 (21-102)||(41707503-41707583)
chr4 (28-124)||(40067088-40067184)
chr4 (21-73)||(49076515-49076567)
chr4 (25-120)||(760230-760324)
chr4 (26-121)||(15841387-15841482)
chr4 (21-104)||(43174544-43174627)
chr4 (21-144)||(51768056-51768179)
chr4 (38-143)||(3271841-3271948)
chr4 (30-140)||(18879852-18879962)
chr4 (21-73)||(10246384-10246436)
chr4 (46-130)||(19504758-19504842)
chr4 (26-120)||(23556886-23556980)
chr4 (26-120)||(28034271-28034365)
chr4 (26-119)||(34544148-34544242)
chr4 (21-102)||(48111736-48111817)
chr4 (51-102)||(10396483-10396534)
chr4 (51-102)||(11197293-11197344)
chr4 (21-140)||(39698944-39699065)
chr4 (21-131)||(45489341-45489450)
chr4 (98-155)||(11702284-11702341)
chr4 (51-103)||(922485-922537)
chr4 (38-102)||(15841023-15841086)
chr4 (19-50)||(44620331-44620362)
chr4 (57-123)||(50788011-50788077)
chr4 (50-96)||(51681604-51681650)
chr4 (94-131)||(19895406-19895443)
chr4 (22-50)||(44620983-44621011)
[»] chr3 (68 HSPs)
chr3 (19-143)||(22304604-22304728)
chr3 (21-154)||(12114550-12114683)
chr3 (21-140)||(15772891-15773010)
chr3 (21-168)||(42342362-42342509)
chr3 (21-154)||(29644890-29645023)
chr3 (19-152)||(37990967-37991100)
chr3 (19-140)||(43346793-43346914)
chr3 (21-144)||(35946559-35946682)
chr3 (19-166)||(37990615-37990762)
chr3 (23-143)||(32589742-32589862)
chr3 (19-131)||(41359776-41359888)
chr3 (24-131)||(32462911-32463018)
chr3 (21-168)||(52634713-52634858)
chr3 (21-168)||(54017791-54017937)
chr3 (21-131)||(39934966-39935076)
chr3 (21-154)||(29644569-29644702)
chr3 (21-142)||(39914289-39914410)
chr3 (37-152)||(22303944-22304060)
chr3 (21-143)||(21832344-21832464)
chr3 (21-131)||(54018209-54018319)
chr3 (19-144)||(33803250-33803375)
chr3 (36-140)||(42342092-42342196)
chr3 (21-131)||(45395664-45395774)
chr3 (19-116)||(3135099-3135196)
chr3 (19-111)||(39389105-39389197)
chr3 (43-143)||(3135453-3135555)
chr3 (19-153)||(25739413-25739548)
chr3 (19-113)||(4823690-4823784)
chr3 (42-131)||(22303670-22303759)
chr3 (23-108)||(33362327-33362412)
chr3 (21-102)||(53118015-53118095)
chr3 (21-136)||(9240186-9240301)
chr3 (24-131)||(32462569-32462676)
chr3 (21-131)||(25755431-25755541)
chr3 (24-142)||(45901754-45901872)
chr3 (21-131)||(15773229-15773341)
chr3 (21-131)||(49336697-49336808)
chr3 (24-166)||(1634291-1634432)
chr3 (23-144)||(44160545-44160663)
chr3 (21-129)||(31190054-31190154)
chr3 (21-100)||(42584864-42584943)
chr3 (26-119)||(47964541-47964634)
chr3 (34-91)||(52634990-52635047)
chr3 (58-154)||(41359479-41359575)
chr3 (21-166)||(33175635-33175785)
chr3 (21-127)||(53577401-53577507)
chr3 (21-102)||(8327941-8328022)
chr3 (21-141)||(11661988-11662108)
chr3 (26-120)||(39336253-39336345)
chr3 (26-120)||(39335992-39336086)
chr3 (10-68)||(51886587-51886645)
chr3 (26-91)||(12749211-12749276)
chr3 (26-91)||(46546376-46546441)
chr3 (19-143)||(50612446-50612575)
chr3 (93-168)||(22304302-22304378)
chr3 (39-102)||(47964955-47965018)
chr3 (51-102)||(53596542-53596593)
chr3 (54-100)||(54017590-54017636)
chr3 (21-74)||(7767382-7767435)
chr3 (54-91)||(16868434-16868471)
chr3 (26-118)||(25317200-25317292)
chr3 (51-98)||(48127859-48127906)
chr3 (51-102)||(53596027-53596078)
chr3 (51-102)||(53596342-53596393)
chr3 (21-91)||(3384317-3384387)
chr3 (64-102)||(25413125-25413163)
chr3 (39-96)||(17731950-17732007)
chr3 (39-96)||(19033181-19033238)
[»] scaffold0078 (2 HSPs)
scaffold0078 (21-104)||(5394-5477)
scaffold0078 (21-131)||(5019-5129)
[»] scaffold0702 (2 HSPs)
scaffold0702 (21-168)||(489-635)
scaffold0702 (19-143)||(146-265)
[»] scaffold0027 (1 HSPs)
scaffold0027 (19-143)||(47395-47519)
[»] scaffold0391 (2 HSPs)
scaffold0391 (21-167)||(1082-1227)
scaffold0391 (31-102)||(1731-1802)
[»] scaffold0734 (2 HSPs)
scaffold0734 (19-131)||(5431-5544)
scaffold0734 (19-131)||(5812-5929)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-79)||(17519-17579)
[»] scaffold0504 (1 HSPs)
scaffold0504 (22-61)||(10192-10231)
[»] scaffold0088 (1 HSPs)
scaffold0088 (22-62)||(10406-10446)


Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 19 - 614
Target Start/End: Original strand, 29157600 - 29158180
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||  ||||||    
T  29157600 atagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgctcgtgtagttgct 29157699  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagta---tcgttttaagcaccgtatgagctgtcaggaaacaaaggcaacatac 215  Q
    |||  || ||||| ||| ||| ||||| ||| ||||| | |||||||||||   ||||||||||||                  |||||||||||| |||    
T  29157700 ctagtcttgatgtggacggtctcccagactctcctcactgacccaacagtaagatcgttttaagca------------------aacaaaggcaacgtac 29157781  T
Q  216 ctttgatggattacaaccttactttcattttaatttgggtatactggcttgctcaaaaagtgtgtaacttaccagattttatagaaacaaatatacttag 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  29157782 ctttgatggattacaaccttactttcattttaatttgggtatactggcttgttcaaaaagtgtgtaacttatcagattttatagagaaaaatatacttag 29157881  T
Q  316 caataacttataaatcatttcaaagacaaaatcagtaaagaaccacgatttgatcctacagtttggccaaacagtgatttttatttcattcataatttat 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29157882 caataacttataaatcatttcaaagacaaaatcagtaaagaaccacgatttgatcctacagtttggccaaacagtgatttttatttcattcataatttat 29157981  T
Q  416 tcattattcccatacacataattaaaagcaaagcctaagggactttctcacatcacatgcatggttaattacatagttaattaactacatgatggatagc 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29157982 tcattattcccatacacataattaaaagcaaagcctaagggactttctcacatcacatgcatggttaattacatagttaattaactacatgatggatagc 29158081  T
Q  516 agaagttagtgatatcatagcaacgacactgtggaggaaaagaccttgtgcaaaggcaacttttgcaagctgagtgacatttttctctaacatcagtac 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29158082 agaagttagtgatatcatagcaacgacactgtggaggaaaagaccgtgtgcaaaggcaacttttgcaagctgagtgacatttttctttaacatcagtac 29158180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 11845226 - 11845373
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| |||| |    
T  11845226 atagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctcttgcttgtgcagttgtt 11845325  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacag 167  Q
    ||| ||||||||| ||| |||||||  ||||||| |||| |||||||||    
T  11845326 ctagcctcgatgtagacggtcccccgtgctcccc-cagtgacccaacag 11845373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 37533487 - 37533339
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||| |    
T  37533487 atagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgtt 37533388  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| |||||||  ||||||||| || ||||||||||    
T  37533387 ctagcctcgatgtggacggtcccccgcgctcccctc-gtgacccaacagt 37533339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 1085739 - 1085591
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||| |||||| ||||| |    
T  1085739 atagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgtggttgtt 1085640  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| ||||||| ||||||||||| | ||||||||||    
T  1085639 ctagcctcgatgtggacggtccccctggctcccctca-tgacccaacagt 1085591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 7517617 - 7517762
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| |||  |||||| ||||| |||    
T  7517617 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctgtctcacttgtgtggttgttct 7517716  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    | ||||||||| |   ||||||  ||||||||||||||||||||||    
T  7517717 agcctcgatgtgggtggtccccttggctcccctcagtaacccaaca 7517762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 37533133 - 37532986
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||| |||||||||||||||||||| ||| |    
T  37533133 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa-agtgtggtgtctctcttgcttgtgcgcttgtt 37533035  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||||||||||||| ||| |||||||  |||||| || || ||||||||||    
T  37533034 ctaacctcgatgtggacggtcccccgcgctcccatc-gtgacccaacagt 37532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 45433278 - 45433411
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||    
T  45433278 agtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtggggttgttct 45433377  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | ||||||||| | | ||||||| ||||||||||    
T  45433378 agcctcgatgtggtcggtccccctggctcccctc 45433411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 23500 - 23376
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||| |||||||||| |    
T  23500 atagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttgcatgtgcggttgtt 23401  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||| | ||| |||||||    
T  23400 ctagcctcgatttggacggtccccc 23376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 379 - 614
Target Start/End: Original strand, 29161609 - 29161844
Alignment:
Q  379 tggccaaacagtgatttttatttcattcat----aatttattcattattcccatacacataattaaaagcaaagcctaagggactttctcacatcacatg 474  Q
    |||||||||||| |||||||||||||||||    | ||||||||| ||| |||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  29161609 tggccaaacagtaatttttatttcattcattcatagtttattcatgatttccatacacataattaaaaacaaagccaaagggactttgtcacatcacatg 29161708  T
Q  475 catggttaattacatagttaattaactacatgatggatagcagaagttagtgatatcatagcaacgacactgtggaggaaaagaccttgtgcaaaggcaa 574  Q
    |||||    ||||||||||||||||  ||   || ||||||||||| |||||| ||||| |||||| ||||||||||||| | || ||||||||| ||||    
T  29161709 catgg----ttacatagttaattaatcac---attgatagcagaaggtagtgacatcatggcaacggcactgtggaggaataaactttgtgcaaacgcaa 29161801  T
Q  575 cttttgcaa---gctgagtgacatttttctctaacatcagtac 614  Q
      |  ||||   | ||||| |||||||||||||||||||||||    
T  29161802 tctaagcaacctggtgagttacatttttctctaacatcagtac 29161844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 22567160 - 22567026
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||| |||||||||||||||||| ||||| ||     
T  22567160 agtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtggggttgttcg 22567061  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
      ||||||||| ||  |||||||  ||||||||||    
T  22567060 ggcctcgatgtggatggtcccccgagctcccctca 22567026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 19122766 - 19122878
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||||||| ||||| |    
T  19122766 atagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtctatcttgcttgtgtggttgtt 19122865  T
Q  119 ctaacctcgatgt 131  Q
    |||  ||||||||    
T  19122866 ctagtctcgatgt 19122878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 36939856 - 36939744
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||| |||| |||||||||| |||||||| |    
T  36939856 atagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtggtgtttctcttgcttatgcggttgtt 36939757  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  36939756 ctagcctcgatgt 36939744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 40094895 - 40094785
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| |||||||||||||||||||||||||||||||||| | |||||| |||||| ||||||||| | |||||||||||||||| ||||| |||    
T  40094895 agtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgaggttgttct 40094796  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  40094795 agcctcgatgt 40094785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 8128560 - 8128415
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    |||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||| ||||||||| ||||| |||| |||| || ||||| ||||     
T  8128560 taaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggttaagagtgtggtgtcactctcgcttatgtggttgttctag 8128461  T
Q  123 cctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | |||||||  ||||||||||   ||||||||| ||||||||||||    
T  8128460 catcgatgtgaacagtcccccgcactcccctcactaacccaacagt 8128415  T

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Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 6054595 - 6054719
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||| | |||||  ||||| |    
T  6054595 atagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcctacttgtatggttgtt 6054694  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||| ||||| ||| |||||||    
T  6054695 ctagccttgatgtggacggtccccc 6054719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 30244307 - 30244439
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||  |||||| ||||| ||     
T  30244307 agtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcacttgtgtggttgttca 30244406  T
Q  121 aacctcgatgttgacagtcccccaggctcccct 153  Q
    | ||||||||| ||  |||||||  ||||||||    
T  30244407 agcctcgatgtggatggtcccccgagctcccct 30244439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 45754750 - 45754862
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  45754750 atagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 45754849  T
Q  119 ctaacctcgatgt 131  Q
    | | |||||||||    
T  45754850 caagcctcgatgt 45754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 7554060 - 7554151
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||||| |||||||||| |||||||    
T  7554060 atagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttgtg 7554151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 29161362 - 29161472
Alignment:
Q  198 gaaacaaaggcaacatacctttgatggattacaaccttactttcattttaatttgggtatactggcttgctcaaaaagtgtgtaacttaccagattttat 297  Q
    ||||||||| ||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||    
T  29161362 gaaacaaagacaacatacctttattggattacaacctttatttcattttaatttgggtatactggcttgttcaaaaagtgtgtaacttataagatttcat 29161461  T
Q  298 agaaacaaata 308  Q
    | ||| |||||    
T  29161462 aaaaaaaaata 29161472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 24177472 - 24177567
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||| | ||||||||| | ||||||||||||||||||||||    
T  24177472 agtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgtctctcttgcttgtgcggttg 24177567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 30245114 - 30245197
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||    
T  30245114 agtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg 30245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 22566783 - 22566713
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  22566783 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 22566713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 45434673 - 45434783
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||| |||||||||  |||||||||| ||||||  |||| |||    
T  45434673 agtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgtctctcttacttgtggagttgttct 45434772  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  45434773 agcctcgatgt 45434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 511 - 611
Target Start/End: Original strand, 29206677 - 29206777
Alignment:
Q  511 atagcagaagttagtgatatcatagcaacgacactgtggaggaaaagaccttgtgcaaaggcaacttttgcaagctgagtgacatttttctctaacatca 610  Q
    ||||||||| | |||| |||||  |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  29206677 atagcagaaatcagtggtatcagtgcaacggcactgtggaggaaaagatcttgtgcaaaggcatcttttgcaagctgagtgacatttttctccaatatca 29206776  T
Q  611 g 611  Q
    |    
T  29206777 g 29206777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 30032611 - 30032735
Alignment:
Q  28 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcg 127  Q
    ||||||||||||||||||||||| | ||||||||| || |||||||| |||||| |||||||||    ||||||||||||||||||||| |||| |||||    
T  30032611 gttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaagagtgtgacatctctcttgcttgtgcggttgttctatcctcg 30032710  T
Q  128 atgttgacagtcccccaggctcccc 152  Q
    |||| ||| |||||||  |||||||    
T  30032711 atgtggacggtcccccgagctcccc 30032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 16569233 - 16569316
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||  ||||||||||||    
T  16569233 agtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 16596429 - 16596346
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | ||||||||  ||||||||||||    
T  16596429 agtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 34218155 - 34218036
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||| |||||| |||||| ||||||||| |||||||||| ||||||  ||||| ||     
T  34218155 agtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctctctcgcttgtatggttgttca 34218056  T
Q  121 aacctcgatgttgacagtcc 140  Q
    | ||||||||| ||| ||||    
T  34218055 agcctcgatgtggacggtcc 34218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 14681545 - 14681627
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctc 101  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||| ||||||||| |||||||||    
T  14681545 atagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctc 14681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 118422 - 118277
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtc--tctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||| || |||| |||||| ||||||||| | |||  ||||||||||||| ||||| |    
T  118422 agtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgtctatctcttgcttgtgtggttgtt 118323  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| | | ||||| ||| || ||||||||||||| |||| ||||||||    
T  118322 ctagctttgatgtggacggt-ccccaggctcccc-cagtgacccaaca 118277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 37167840 - 37167960
Alignment:
Q  43 agtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccc 142  Q
    |||||||||| ||||||| |||||| |||||  |||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||| ||| |||| |    
T  37167840 agtaagaggatccataaatccattgacttaaagttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcctc 37167939  T
Q  143 caggctcccctcagtaaccca 163  Q
    |  ||||||| |||| |||||    
T  37167940 cgcgctccccccagtgaccca 37167960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 9901681 - 9901799
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| |||||| ||| ||||| |||||||| ||||| |||||| |||||| ||||||||| |||||||||||||| ||||||||| |||    
T  9901681 agtaaaggttgaacatcttatacgta-gaggatccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgctagtgcggttgttct 9901779  T
Q  121 aacctcgatgttgacagtcc 140  Q
    | ||||| ||| ||| ||||    
T  9901780 agcctcggtgtggactgtcc 9901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 508 - 614
Target Start/End: Original strand, 29144943 - 29145049
Alignment:
Q  508 tggatagcagaagttagtgatatcatagcaacgacactgtggaggaaaagaccttgtgcaaaggcaacttttgcaagctgagtgacatttttctctaaca 607  Q
    |||||||||||||| ||||||||||  |||  ||||||||||||||| |||  |||||||||| || ||||||||||||||||||||| |||||| || |    
T  29144943 tggatagcagaagtcagtgatatcagcgcagtgacactgtggaggaatagattttgtgcaaagacagcttttgcaagctgagtgacatgtttctccaata 29145042  T
Q  608 tcagtac 614  Q
    |||||||    
T  29145043 tcagtac 29145049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 30253534 - 30253612
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||| ||||||||||||    
T  30253534 aggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg 30253612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 28300366 - 28300229
Alignment:
Q  30 tgaacaccttataagtaagaggaccc-ataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcga 128  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| | |||||||||||  ||| ||||| ||   ||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcga 28300267  T
Q  129 tgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||| |||| || | ||||||| | | ||||||||    
T  28300266 tgtggacggtcctcctgactccccttattgacccaaca 28300229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 24838823 - 24838727
Alignment:
Q  21 agtaaaggttgaacaccttataagtaaga-ggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||| |||||| |||||||||   |||||||||||||||| |||||    
T  24838823 agtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgtggttg 24838727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 47129130 - 47129265
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| || ||||| |||||| || |||||| ||||||||||  |  ||| ||||| |    
T  47129130 atagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctctcacaagtgtggttgtt 47129229  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||| |||| |||| ||| |||||| | ||||||||||    
T  47129230 ctagcctcaatgtagacggtccccga-gctcccctca 47129265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 1085371 - 1085280
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    |||||||| |||||||| || ||||||||||| |||||||||| |||||||||||| |||||| ||||||||| |||| |||||| ||||||    
T  1085371 atagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtttctcttccttgtg 1085280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 47129450 - 47129539
Alignment:
Q  65 ttgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||| ||| |||||| | ||||||||||    
T  47129450 ttgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggtccccga-gctcccctca 47129539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 40230412 - 40230328
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgc 105  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| | |||||| |||||| ||| ||| | |||||||||||||    
T  40230412 agtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggtaaaagtctggtgtctctcttgc 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 41854671 - 41854802
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||| |||| |||| |||||   | ||||||||| |||||| |||||||||   |||| |||| |||||||||||| |||    
T  41854671 agtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgtgacgtctttcttacttgtgcggttgttct 41854770  T
Q  121 aacctcgatgttgacagtcccccaggctcccc 152  Q
    | |||| |||| ||| ||||||| | ||||||    
T  41854771 agcctcaatgtagacggtccccctgactcccc 41854802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 36534905 - 36534825
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctc 101  Q
    |||| ||||||||||||||||||||||||||||||||||||| |  | |||||| |||||| ||||||||| | |||||||    
T  36534905 agtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcgtctctc 36534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 28301664 - 28301613
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 72  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  28301664 agtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 36622995 - 36623117
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| ||||  ||||||||| ||||| ||||||| ||||||||||||| |||||| || |||| | ||| ||||||| |||||| | ||| |    
T  36622995 atagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgggtaggagtatggtgcctctcttacttgtgtgattgtt 36623094  T
Q  119 ctaacctcgatgttgacagtccc 141  Q
    || |||| ||||| ||| |||||    
T  36623095 ctgaccttgatgtggacggtccc 36623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 41910715 - 41910657
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt 79  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||    
T  41910715 agtaaaggttgaataccttataactgagaggacccataaacccattggcttaagatttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 20599351 - 20599463
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggata--agagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| | ||||| |||||| |||||||||  |||||| |||||||||||  |||||| ||  ||||||| |||||||||||||||||  ||||| |    
T  20599351 agtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgggtaagagagtgtggtgtctctcttgcttgtatggttgtt 20599450  T
Q  119 ctaacctcgatgt 131  Q
     |||||| |||||    
T  20599451 ttaaccttgatgt 20599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 21416232 - 21416181
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  21416232 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 21416181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 30253671 - 30253741
Alignment:
Q  85 agagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||| ||||||||||  |||||| ||||| || | ||||||||| ||| |||||||||||||||||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggactgtcccccaggctcccctca 30253741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 43241534 - 43241616
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgc 105  Q
    ||||||||||||||||||||||||| ||||| |||||||  |||| |||||| |||| | ||| ||| |  ||||||||||||    
T  43241534 taaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggtaaaagtatgatgtctctcttgc 43241616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 23569091 - 23569043
Alignment:
Q  53 cccataaacccattgccttaagattttggataagagtgtagtgtctctc 101  Q
    |||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  23569091 cccataaacccattgccttaaggttttgggtaagagtgtgatgtctctc 23569043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 30245531 - 30245567
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccat 57  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30245531 agtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 30255376 - 30255412
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccat 57  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30255376 agtaaaggttgaacaccttataagtaagagggcccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 36109038 - 36109007
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagagga 52  Q
    ||||||||||||||||||||||||||||||||    
T  36109038 agtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 36675651 - 36675702
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||| ||| ||||||| |||||||||||| ||||| ||||||||||    
T  36675651 gacccataaatccactgccttaggattttggataatagtgtggtgtctctct 36675702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 30244453 - 30244523
Alignment:
Q  85 agagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||| ||||||||||  |||||| ||||| || | ||||||||| ||| ||||| |||||||||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggtccctcaggctcccctca 30244523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 28300644 - 28300579
Alignment:
Q  67 gccttaagattttgga-taagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||| ||||  |||| |||||||||    
T  28300644 gccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgt 28300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 30244738 - 30244771
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacc 54  Q
    ||||||||||||||||||||||| ||||||||||    
T  30244738 agtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 6500485 - 6500634
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  6500485 atagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 6500584  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| ||||||||||||||||||| | ||||||||||    
T  6500585 ctagcctcgatgtggacggtcccccaggctcccctcacttacccaacagt 6500634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 6500857 - 6501002
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||  |    
T  6500857 atagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctcttacttgtgcggttatt 6500956  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaa 164  Q
    ||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  6500957 ctagcctcgatgtggacggtcccccaggctcccctcacttacccaa 6501002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 40296438 - 40296310
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||| |    
T  40296438 atagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 40296339  T
Q  119 ctaacctcgatgttgacagtcccccaggc 147  Q
    ||| ||||||||| ||| |||||||||||    
T  40296338 ctagcctcgatgtggacggtcccccaggc 40296310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 27502159 - 27502023
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||| |||||||||||||||||| ||||| |    
T  27502159 atagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctctcttgcttgtgtggttgtt 27502060  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||| ||||||||| ||| |||||||  ||||||||||    
T  27502059 ctatcctcgatgtggacggtccccctagctcccctca 27502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 41632819 - 41632943
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||| | |    
T  41632819 agtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctcttgcttgtgcggttgtttt 41632918  T
Q  121 aacctcgatgttgacagtcccccag 145  Q
    |  |||||||| ||| |||||||||    
T  41632919 agtctcgatgtggacggtcccccag 41632943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 18603243 - 18603097
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |  ||||||||||||||| ||| | |    
T  18603243 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggtagtt 18603144  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| || | || |||||||||| |||||||||||    
T  18603143 ctagcctcgatgtggacggttctcctggctcccctc-gtaacccaaca 18603097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 26074649 - 26074759
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||  || ||| |||||||||    
T  26074649 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctct 26074748  T
Q  121 aacctcgatgt 131  Q
    |||||||||||    
T  26074749 aacctcgatgt 26074759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 3295138 - 3295002
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| || |||||| |||||||||||| ||||| ||||| |    
T  3295138 atagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctcttggttgtgtggttgtt 3295039  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctca 155  Q
     || ||||||||| |||||||||||  ||||||||||    
T  3295038 gtagcctcgatgtggacagtccccctcgctcccctca 3295002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 3295467 - 3295344
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||  ||||||||||||||||| ||||| |    
T  3295467 atagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggttttgg-taagagtgtgttgtctctcttgcttgtgtggttgtt 3295369  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  3295368 ctagcctcgatgtggacggtccccc 3295344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 25327972 - 25328119
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||||| |||||||||||||  ||| ||||| |||    
T  25327972 agtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgtggttgttct 25328071  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | |||| |||| ||| |||||||  |||||||||||| ||||||||||    
T  25328072 agcctcaatgtggacggtcccccgagctcccctcagtgacccaacagt 25328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 9498777 - 9498692
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  9498777 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctctcttg 9498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 36492338 - 36492195
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||| || |||||||||||||||| |||||||||||||||||| ||||| |||    
T  36492338 agtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttct 36492239  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    | ||||||||| ||| ||||| | |||||| | |||||||||||||    
T  36492238 agcctcgatgtggacggtccctc-ggctcctc-cagtaacccaaca 36492195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 13415882 - 13415774
Alignment:
Q  20 tagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||| | |||||||||||||||||||||| ||    
T  13415882 tagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttc 13415783  T
Q  120 taacctcga 128  Q
    || ||||||    
T  13415782 tagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 41170669 - 41170793
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| | ||||||||||| ||||| |    
T  41170669 atagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttgtgtggttgtt 41170768  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||| ||| ||| |||||||    
T  41170769 ctagcctcggtgtagacggtccccc 41170793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 34753146 - 34753015
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||||| |||    
T  34753146 agtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttct 34753047  T
Q  121 aacctcgatgttgacagtcccccaggctcccc 152  Q
    | ||||||||| ||| ||  |||| |||||||    
T  34753046 agcctcgatgtggacggtttcccaagctcccc 34753015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 15370125 - 15370267
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||||||| |||  |||||||| |||||| ||||||||| |||||||||||||||||    
T  15370125 tcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgtctctcttgcttgt 15370224  T
Q  110 gcggttgctctaacctcgatgttgacagtcccccaggctcccc 152  Q
    | | ||| |||| ||||||||| ||| |||||||  |||||||    
T  15370225 gggattgttctagcctcgatgtggacggtcccccgagctcccc 15370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 15370439 - 15370573
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||| | |||||||||| ||||| ||||| |||    
T  15370439 agtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgtggggttgttct 15370538  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||||| ||| |||| ||| ||||||||||    
T  15370539 agcctcgatgtggacggtcctccatgctcccctca 15370573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 6224233 - 6224366
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| | ||||||||| ||| |||  ||||||||||||||| |||    
T  6224233 agtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagtgtggtgcctcagttgcttgtgcggttggtct 6224332  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | |||| || | ||| ||||||||||||||||||    
T  6224333 agcctcaatatggacggtcccccaggctcccctc 6224366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 42405719 - 42405574
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||| |||||| ||||| |||||||| | ||||||||| |||||| ||||||||| |||  ||||||||||||||||||| |    
T  42405719 atagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaagagtgtggtg--tctcttgcttgtgcggttgtt 42405622  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| |||||||  ||||||| |||| ||||||||    
T  42405621 ctagcctcgatgtggacggtcccccgagctccccccagtgacccaaca 42405574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 1028638 - 1028492
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||  ||||||| |||| | ||||||||| | ||||||||  |||||||||||| |||    
T  1028638 agtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgtctctctcacttgtgcggttgttct 1028539  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacag 167  Q
    | ||||||||| ||| |||||||  |||||||||||| |||||||||    
T  1028538 agcctcgatgtggacggtccccctagctcccctcagtgacccaacag 1028492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 26074267 - 26074157
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||  || ||| |||||||||    
T  26074267 agtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgctct 26074168  T
Q  121 aacctcgatgt 131  Q
    |||||||||||    
T  26074167 aacctcgatgt 26074157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 299526 - 299674
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||  ||||||||| | |||||| |||||||| |||||| |||    
T  299526 agtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgtaagagtgtggcgtctctattgcttgtacggttgttct 299625  T
Q  121 aacctcgatgttgacagtcccccag-gctcccctcagtaacccaacagt 168  Q
    | | ||||||| ||||||||||| | ||||||||||  | |||||||||    
T  299626 agcatcgatgtggacagtcccccggagctcccctcatgaccccaacagt 299674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 624231 - 624379
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| ||||| || |||||| ||||||||| ||||||||||  |||||| ||||| |    
T  624231 atagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctctcacttgtggggttgtt 624330  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacag 167  Q
    ||| ||||||||| ||| || ||||  |||||||  ||| |||||||||    
T  624331 ctagcctcgatgtggacggttccccgagctccccctagtgacccaacag 624379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 33747806 - 33747918
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| || || ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |    
T  33747806 atagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtgtctctcttccttatgcggttgtt 33747905  T
Q  119 ctaacctcgatgt 131  Q
    ||| ||| |||||    
T  33747906 ctagccttgatgt 33747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 32487429 - 32487553
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||   || |||||||||| || ||||| |    
T  32487429 atagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgacgtatctcttgcttatgtggttgtt 32487527  T
Q  119 ctaacctcgatgttgacagtccccca 144  Q
    ||| ||||||||| ||  ||||||||    
T  32487528 ctagcctcgatgtggatggtccccca 32487553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 11417100 - 11416988
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||||  | ||||||||||||||| | ||| |    
T  11417100 atagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtgatctctctcttgcttgtgggattgtt 11417001  T
Q  119 ctaacctcgatgt 131  Q
    ||| | |||||||    
T  11417000 ctagcttcgatgt 11416988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 26075283 - 26075172
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggat-aagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||   |||||||||||  ||| ||||| |     
T  26075283 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtgtcgtctctcttgcaagtgtggttgttt 26075184  T
Q  120 taacctcgatgt 131  Q
    || |||||||||    
T  26075183 tagcctcgatgt 26075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 36568688 - 36568545
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||| ||| ||||| |||||||||||||||||| |||| | ||||||||| | ||||||||  |||||| ||||| |||    
T  36568688 agtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgtctctct--cttgtgtggttgttct 36568591  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    | ||||||||| ||  |||||||  |||||||||| | ||||||||    
T  36568590 atcctcgatgtggaaggtcccccgagctcccctcaatgacccaaca 36568545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 29549378 - 29549281
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    |||||||||| |||||||| ||||||||||| ||||||||||| |||| ||||||| |||||||||||||||| | ||||||||||||| || |||||    
T  29549378 atagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttggataagagtgtggcgtctctcttgcttatgtggttg 29549281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 24489322 - 24489194
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    ||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||  ||||||||| | |||||| || |||||||||||| ||||      
T  24489322 aaaggttaaacaccttattagtaaga--acccataaacccattgccttaagattttgcgtaagagtgtggcgtctcttttacttgtgcggttgttctagt 24489225  T
Q  124 ctcgatgttgacagtcccccaggctcccctc 154  Q
    |||||||| | | ||||| ||| ||||||||    
T  24489224 ctcgatgtgggcggtccctcagactcccctc 24489194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 26591031 - 26590921
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||| |||||||  || ||||||||| |||||  ||||||||| | ||||||||  || ||| ||||| |||    
T  26591031 agtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctcactagtgtggttgttct 26590932  T
Q  121 aacctcgatgt 131  Q
    |||||||||||    
T  26590931 aacctcgatgt 26590921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 35150048 - 35150164
Alignment:
Q  25 aaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacc 124  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||| ||| ||||| ||||||||||  || ||| ||||| |||||||    
T  35150048 aaggttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctctcactagtgtggttgttctaacc 35150146  T
Q  125 tcgatgttgacagtcccc 142  Q
    || |||| ||| ||||||    
T  35150147 tcaatgtggaccgtcccc 35150164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 12662775 - 12662663
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||  ||||||||||||  ||||||||| |||||| |||||| |||||| ||||||||| ||| || ||||||||||| ||||  |    
T  12662775 atagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgggtaagagtgtggtgcctttcttgcttgtggggttctt 12662676  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  12662675 ctagcctcgatgt 12662663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 38427585 - 38427694
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| |||||||||| |||||||||| || |||||| |||||| |||||  |||||||||   ||||||||  |||||||||||| |||    
T  38427585 agtaaaggttgaacatcttataagta-gaggacccattaatccattgtcttaaggttttgtgtaagagtgtgacgtctctctcacttgtgcggttgttct 38427683  T
Q  121 aacctcgatgt 131  Q
    |||||||||||    
T  38427684 aacctcgatgt 38427694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 2411044 - 2411176
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||| ||| |||||||||| ||||||||||  ||||||||||| |||||  |||||||||||| ||||| || ||||   | ||| |||    
T  2411044 agtaaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaagagtgtagtttctctattacttgaatgattgttct 2411143  T
Q  121 aacctcgatgttgacagtcccccaggctcccct 153  Q
    ||||||||| | ||| |||||||| ||||||||    
T  2411144 aacctcgatatggacggtcccccaagctcccct 2411176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 38427306 - 38427378
Alignment:
Q  71 taagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtccccc 143  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||| | |||||||    
T  38427306 taagattttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctaacctcgatgttggcggtccccc 38427378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 41635312 - 41635212
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||| |||||||| ||||||| |||||| ||||| ||||| | |||||||||||| ||||| || |||||  |||||||||    
T  41635312 agtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaagagtgtagtatctcttttacttgtatggttgctct 41635213  T
Q  121 a 121  Q
    |    
T  41635212 a 41635212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 623853 - 624000
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| ||| |||||||  || ||||||||  || |||||||| |||||  ||||||||| ||||||||||  |||||| ||||| |    
T  623853 atagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagtaagagtgtggtgtctctctcacttgtggggttgtt 623952  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| |||| |||| ||| |||||||  |||  ||||||| ||||||||||    
T  623953 ctagcctcaatgtagacggtcccccgagct--cctcagtgacccaacagt 624000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 26074903 - 26074803
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggat-aagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||||||||||||  |||||||| ||||||||||||||| |||| |||||| |||||| | |||||||| | |||||||||||  ||| ||||||||    
T  26074903 agtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcgtctctcttgcaagtgtggttgctc 26074804  T
Q  120 t 120  Q
    |    
T  26074803 t 26074803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 13042606 - 13042657
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  13042606 gacccataaacccattgccttaaggttttggataagagtgtggtgtctctct 13042657  T

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Target: chr5; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 13786116 - 13786041
Alignment:
Q  27 ggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||| |||||||||||| ||||| |||| | |||| |||||||||||||||||||||||  |||||||||    
T  13786116 ggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggataagagtgtgatgtctctct 13786041  T

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Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 5723910 - 5723812
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctcta 121  Q
    |||| ||||||||| ||||| ||||||| |||||| ||   |||| |||||| ||||||  |||||| |||||||||||||||||||||||||| ||||    
T  5723910 taaaagttgaacacattatatgtaagagaacccattaatttattgtcttaaggttttgggaaagagtatagtgtctctcttgcttgtgcggttgttcta 5723812  T

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Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 36522351 - 36522261
Alignment:
Q  28 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||  |||||||| |||||||| |||||||||||  |||||| |||||| ||||||||| ||||||||||  ||||||||| ||||    
T  36522351 gttgaacattttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctctcacttgtgcggctgct 36522261  T

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Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 36527196 - 36527135
Alignment:
Q  41 taagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||  |||||||||    
T  36527196 taagtgagaggatccataaacgcattgccttaagattttggataagagtgtgctgtctctct 36527135  T

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Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 300996 - 301077
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    ||||||||||||| ||||||||||||||||        || |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  300996 agtaaaggttgaataccttataagtaagag--------aatccattgccttaagatttttggtaagagtgtggtgtctctcttgcttgtg 301077  T

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Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 35914886 - 35915010
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||  |||||||||||| ||||| |||| |||||||| |||  | |||||||||| ||| || |||||||||||| |  | ||| ||     
T  35914886 agtaaaggttgaacattttataagtaagaagacccgtaaatccattgccctaaattattggataagaatgtggtatctctcttgcttatatgattggtca 35914985  T
Q  121 aacctcgatgttgacagtcccccag 145  Q
    |||||| |||| ||| |||||||||    
T  35914986 aacctcaatgtggacggtcccccag 35915010  T

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Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 26900089 - 26900007
Alignment:
Q  70 ttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||||| |||||| ||||||||| |||||||||||||||||| | ||| |||| ||| ||||| ||| |||||||| |||||||    
T  26900089 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtcccccaagctcccc 26900007  T

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Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 35167959 - 35167837
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||| || |||||||||| | |||||||| |  |||| | |||||||||  ||||||||   || ||| ||||| |||    
T  35167959 agtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctctcacactagtgtggttgttct 35167860  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | | ||||||| ||| |||||||    
T  35167859 agcatcgatgtggactgtccccc 35167837  T

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Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 42508649 - 42508707
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt 79  Q
    |||||||||| |||| || |||||||||||||| |||||||||||||||||||| ||||    
T  42508649 agtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

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Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 26074357 - 26074398
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaaccca 64  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  26074357 taaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

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Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 13112604 - 13112651
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtct 98  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  13112604 gacccataaacccattgtcttaaggttttggataagagtgtggtgtct 13112651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 36522012 - 36521947
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||||||  | ||| | |||||||||||||||| ||||||||||| |||||| |||||||||    
T  36522012 aggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgggtaagagtgt 36521947  T

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Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 795306 - 795258
Alignment:
Q  68 ccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    ||||||| |||| | ||||||||| ||||||||||||||||||||||||    
T  795306 ccttaaggttttaggtaagagtgtggtgtctctcttgcttgtgcggttg 795258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 7768889 - 7768925
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataa 59  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7768889 taaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 9510624 - 9510544
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||| ||||||||| | |||||||| ||||| | ||| | | ||||||||||||| |||||| |||||||    
T  9510624 ttataagtgagaggagccataaacctaatgccttaaaattttaggtaaaaatatagtgtctctcttacttgtgtggttgct 9510544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 19275566 - 19275653
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    |||| ||||||||||| ||||||| |||| ||||||||||  ||||| ||||||||||||| ||||| ||| | |||| ||| ||||||    
T  19275566 agtagaggttgaacac-ttataaggaagaagacccataaattcattgtcttaagattttgggtaagattgtggcgtctgtctcgcttgt 19275653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 24489583 - 24489626
Alignment:
Q  86 gagtgtagtgtctctcttgcttgtgcggttgctctaacctcgat 129  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||    
T  24489583 gagtgtggtgtctctcttgcttgtgcagttgttctaacctcgat 24489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 32445943 - 32446021
Alignment:
Q  42 aagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||| ||||||||||||||||||  |||||||| |||||| | | ||||| ||||||||||  |||||  |||||||||    
T  32445943 aagtgagaggacccataaacccaacgccttaaggttttgggttaaagtgtggtgtctctctcacttgttaggttgctct 32446021  T

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Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 41340358 - 41340391
Alignment:
Q  63 cattgccttaagattttggataagagtgtagtgt 96  Q
    ||||||||||||||||||||||||||||| ||||    
T  41340358 cattgccttaagattttggataagagtgtggtgt 41340391  T

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Target: chr6 (Bit Score: 98; Significance: 6e-48; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 16454614 - 16454758
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||     
T  16454614 taaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctcttgcttgtgcggttgttctag 16454713  T
Q  123 cctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||||||||| ||| |||||||  ||||||||| || ||||||||||    
T  16454714 cctcgatgtggacggtcccccgagctcccctc-gtgacccaacagt 16454758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 29518538 - 29518686
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  29518538 atagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 29518637  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| |||||||  ||||| |||| ||||||||||||    
T  29518638 ctagcctcgatgtggacggtcccccgcgctcctctca-taacccaacagt 29518686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 32741214 - 32741361
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  32741214 atagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 32741313  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacag 167  Q
    ||| ||||||||| ||| |||||||  ||||| |||| |||||||||||    
T  32741314 ctagcctcgatgtggacggtcccccgcgctcctctca-taacccaacag 32741361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 29518955 - 29519101
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  29518955 atagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 29519054  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| |||||||  ||||| |||| ||||||||||    
T  29519055 ctagcctcgatgtggacggtcccccgcgctcctctca-taacccaaca 29519101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 35210239 - 35210386
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||| ||| |||||||||||||||||    
T  35210239 atagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggtaagagtgtggtgtttcttttgcttgtgcggttgct 35210338  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| || |||| |||||||| |||| ||||||||||    
T  35210339 ctagcctcgatgtggacggt-cccctggctcccc-cagtgacccaacagt 35210386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 1846783 - 1846907
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |    
T  1846783 atagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctcttttgcttgtgcggttgtt 1846882  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  1846883 ctagcctcgatgtggacggtccccc 1846907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 3409294 - 3409406
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  3409294 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 3409393  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  3409394 ctagcctcgatgt 3409406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 16107715 - 16107825
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  16107715 agtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgctct 16107814  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  16107815 agcctcgatgt 16107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 16454944 - 16455078
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||||| |||    
T  16454944 agtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttct 16455043  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||||| ||| |||||||  ||||||||||    
T  16455044 agcctcgatgtggacggtcccccgagctcccctca 16455078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 3415493 - 3415629
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg-- 116  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||||      
T  3415493 atagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcggttgtt 3415592  T
Q  117 ctctaacctcgatgttgacagtcccccaggctcccct 153  Q
    ||||| ||||||||| ||  |||||||| ||||||||    
T  3415593 ctctagcctcgatgtggaaggtcccccaagctcccct 3415629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 10074484 - 10074352
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||  || ||| ||||| |||    
T  10074484 agtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttct 10074385  T
Q  121 aacctcgatgttgacagtcccccaggctcccct 153  Q
    | ||||||||| || ||||||||||||||||||    
T  10074384 agcctcgatgtggatagtcccccaggctcccct 10074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 2578564 - 2578442
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||||| |||    
T  2578564 agtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcggttgttct 2578465  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| ||| |||||||    
T  2578464 agcctcgatgtggacggtccccc 2578442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 3058261 - 3058386
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||  ||| | |    
T  3058261 atagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtagggtggtt 3058360  T
Q  119 ctaacctcgatgttgacagtccccca 144  Q
    ||||||||||||| ||| ||||||||    
T  3058361 ctaacctcgatgtggaccgtccccca 3058386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 3409695 - 3409819
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| |||||||||||||||||||||||| |    
T  3409695 atagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 3409794  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  3409795 ctagcctcgatgtggacggtccccc 3409819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 1127395 - 1127507
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||||| ||| || |||||||    
T  1127395 atagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctcttacttatgtggttgct 1127494  T
Q  119 ctaacctcgatgt 131  Q
    |||||||||||||    
T  1127495 ctaacctcgatgt 1127507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 2378161 - 2378285
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||| ||| |||||||||||||||| | ||||| |    
T  2378161 atagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctcttgcttgagtggttgtt 2378260  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  2378261 ctagcctcgatgtggacggtccccc 2378285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 2377791 - 2377937
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| | ||||  |||    
T  2377791 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttct 2377890  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||  |||||||  ||| ||| |||| ||||||||||    
T  2377891 agcctcgatgtggaaggtcccccgagcttccc-cagtgacccaacagt 2377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 2579993 - 2579848
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||| ||||| ||| |||||||||||||||||||||||| |||    
T  2579993 agtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtctctcttgcttgtgcggttgttct 2579894  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| || ||  ||||| |||||||||| | ||||||||||    
T  2579893 agcctcgatgtgga-aggtccccaagctcccctca-ttacccaacagt 2579848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 2578956 - 2578822
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||| ||||||||| |||||||| |||||||| |||| ||||||| |||||| ||||||||| |||||||| ||||||||| ||||| |||    
T  2578956 agtaaatgttgaataccttataaataagaggatccataaactcattaccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgtggttgttct 2578857  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
     |||||||||| ||| |||||||||||||||||||    
T  2578856 gacctcgatgtggacggtcccccaggctcccctca 2578822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 5832147 - 5832015
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||| ||| ||||| ||||||||||| |||||| ||||| |||    
T  5832147 agtaaaggttgaacaccttataagtaagaggacccataaagcca-ccccttaagattttgggtaaaagtgtggtgtctctcttacttgtgtggttgttct 5832049  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||||| ||| || ||||||||||||||||    
T  5832048 agcctcgatgtagacggt-ccccaggctcccctca 5832015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 10073737 - 10073604
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||| ||||||||||  || ||| ||||| |||    
T  10073737 agtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctctctcactagtgtggttgttct 10073638  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | | ||||||| ||| ||||  ||||||||||||    
T  10073637 agcatcgatgtggacggtccttcaggctcccctc 10073604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 2579613 - 2579479
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||| | | ||||||||||||||||| ||||||||| |||||||||||| |||||| ||| ||| | |||||||||||||||||| ||||| |||    
T  2579613 agtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgtctctcttgcttgtgtggttgttct 2579514  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||||||| ||  || || |||||||||||||    
T  2579513 aacctcgatgtggatggttccacaggctcccctca 2579479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 2843593 - 2843714
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggaccc-ataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctcta 121  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||| || ||||||||||||| | ||||| ||||    
T  2843593 taaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgagtggttgttcta 2843692  T
Q  122 acctcgatgttgacagtccccc 143  Q
     ||||||||| ||| |||||||    
T  2843693 gcctcgatgtggacggtccccc 2843714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 10074112 - 10073991
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||| |||| |  ||||| |||    
T  10074112 agtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctctcgcttatttggttgttct 10074013  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    | |||||| || ||| ||||||    
T  10074012 agcctcgacgtggacggtcccc 10073991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 593830 - 593683
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtag--tgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||| ||| ||||| |  | |||||||| ||||| |||||| |    
T  593830 agtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtggtatctctctcttacttgtacggttgtt 593731  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    |||  |||||||||||| |||||||  |||||||||| ||||| ||||    
T  593730 ctaggctcgatgttgacggtcccccgagctcccctcaataacctaaca 593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 14748461 - 14748332
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||| ||||||||| |    ||||||||||||| ||||| |    
T  14748461 atagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggtaagagtgtgg----tctcttgcttgtgtggttgtt 14748366  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| |||||||  |||||||    
T  14748365 ctagcctcgatgtggacggtcccccgcgctcccc 14748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 26544084 - 26544196
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||  |||||||||  ||||||||||||||||||| ||| |    
T  26544084 atagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctctcttgcttgtgcgattgtt 26544183  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||| ||||    
T  26544184 ctagcctcaatgt 26544196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 32460703 - 32460631
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  32460703 atagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgt 32460631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 6071174 - 6071268
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||||| ||| || |||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||  |||||||||    
T  6071174 aggttgaacactttataagtgagatgatccataaactcattgccttaagattttggataagagtgtggcgtctctctcgcttgtatggttgctct 6071268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 6999917 - 6999807
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||||||| ||||||||| |||||||| || ||||||||| |||||||||||||||| | ||||||||||||  || ||||| |||    
T  6999917 agtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataagagtgtggcgtctctcttgctaatgtggttgttct 6999818  T
Q  121 aacctcgatgt 131  Q
    |  ||||||||    
T  6999817 agtctcgatgt 6999807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 10911603 - 10911685
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctctt 103  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||| ||||||||||  ||||||||||    
T  10911603 agtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttgaataagagtgtgatgtctctctt 10911685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 1950306 - 1950200
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||| ||||||||||| ||||||| | | ||||||||| |||||  |||||||||   ||||||||| |||||||||||| |||    
T  1950306 agtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaagagtgtgacgtctctcttacttgtgcggttgttct 1950207  T
Q  121 aacctcg 127  Q
    | |||||    
T  1950206 agcctcg 1950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 16108100 - 16108153
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16108100 agtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaag 16108153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 9062472 - 9062383
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||||| |||||| ||| ||||| || |||||||| |||||    
T  9062472 atagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaag-ttttgggtaaaagtgtggtatctctcttacttgt 9062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 8481968 - 8482045
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctctt 103  Q
    ||||||||||| |||||| | ||| ||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  8481968 aggttgaacactttataaatgagatgactcataaactcattgccttaagattttgggtaagagtgtggtgtctctctt 8482045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 11637811 - 11637760
Alignment:
Q  52 acccataaacccattgccttaagattttggataagagtgtagtgtctctctt 103  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  11637811 acccataaacccattgtcttaagattttggataagagtgtggtgtctctctt 11637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 2579226 - 2579085
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||    |||| ||||||||||||  | |||||  ||||| ||||||||| |||||||||||||| ||| ||||| |||    
T  2579226 agtaaaagttgaacaccttataag----aggaaccataaacccataactttaaggctttggctaagagtgtggtgtctctcttgctcgtgtggttgttct 2579131  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | |||||||||  || |||||| | |||||||||| | ||||||||||    
T  2579130 agcctcgatgtgcacggtccccga-gctcccctca-tgacccaacagt 2579085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 12092598 - 12092504
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||| ||| |||||||| |||||| |||||||| |||||||||||| |||||  ||||| ||| ||||||||||  |||||| |||||||||    
T  12092598 aggttgagcactttataagtgagaggatccataaactcattgccttaaggttttgagtaagactgtggtgtctctctcacttgtgaggttgctct 12092504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 14789325 - 14789279
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattg 67  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaaccaattg 14789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 2975589 - 2975668
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctct 100  Q
    |||||| ||||||||||||||||| |||| |||||||||| || ||| |||||  ||||| ||||||||||  |||||||    
T  2975589 agtaaatgttgaacaccttataagcaagatgacccataaatcctttgtcttaaagttttgaataagagtgtgatgtctct 2975668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 5958724 - 5958641
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||||||||||||| |||||| || ||||||| ||||| |||||  ||||||   |||||||  |||||||||||    
T  5958724 agtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttttgggatagagtgtgatgtctctcttg 5958641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 21130147 - 21130103
Alignment:
Q  52 acccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||    
T  21130147 acccataaatccattgccttaaggttttggataagagtgtggtgt 21130103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 35210513 - 35210551
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccat 57  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  35210513 atagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 16108155 - 16108208
Alignment:
Q  88 gtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtccc 141  Q
    |||| |||||||||||||||||| ||||| | |||||||||||| ||| |||||    
T  16108155 gtgtggtgtctctcttgcttgtggggttgttataacctcgatgtggacggtccc 16108208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 20848361 - 20848418
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggat 83  Q
    ||||||||||  |||||||||||||||| |||||| ||| || ||||||||| |||||    
T  20848361 aggttgaacattttataagtaagaggacgcataaatccaatgtcttaagattctggat 20848418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 22605345 - 22605301
Alignment:
Q  52 acccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    ||||||||||||||||||||||| |||||| ||||| ||| ||||    
T  22605345 acccataaacccattgccttaaggttttgggtaagaatgtggtgt 22605301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 6e-45; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 20870696 - 20870560
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  20870696 atagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctcttgcttgtgtggttgtt 20870597  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||| ||| | ||| |||| || |||||||||||    
T  20870596 ctaaccttgatatggacggtcctcctggctcccctca 20870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 3669722 - 3669857
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  3669722 atagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 3669821  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctc 154  Q
    ||| ||||||||| ||  |||||||  |||||||||    
T  3669822 ctagcctcgatgtggatggtccccctagctcccctc 3669857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 9482725 - 9482615
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||| |||    
T  9482725 agtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctcttgcttgtgcggttgttct 9482626  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  9482625 agcctcgatgt 9482615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 9483308 - 9483163
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||| ||||| ||||||||| |||    
T  9483308 agtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgctcgtgcggttgttct 9483209  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    | ||||||||| ||| || |||   ||||||||||||| |||||||    
T  9483208 agcctcgatgtggacggttcccatagctcccctcagtatcccaaca 9483163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 30441116 - 30441255
Alignment:
Q  19 atagtaaaggttgaacacctta----taagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggt 114  Q
    ||||||||||||||||||||||    ||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  30441116 atagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggt 30441215  T
Q  115 tgctctaacctcgatgttgacagtcccccaggctcccctc 154  Q
    || |||| ||||||||| ||||||| ||  ||||||||||    
T  30441216 tgttctagcctcgatgtggacagtcaccttggctcccctc 30441255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 34835244 - 34835377
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||||| ||||  |    
T  34835244 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttatt 34835343  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| ||||||| ||||||||    
T  34835344 ctagcctcgatgtagacggtccccctggctcccc 34835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 3038413 - 3038263
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |  ||||||||||||||| ||||| |    
T  3038413 atagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttgtgtggttgtt 3038314  T
Q  119 ctaacctcgatgttgacagtcccccaggctccc-ctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| |||| ||  |||||| |||||| ||||||||||    
T  3038313 ctagcctcgatgtggacggtcctccgagctccctctcagtgacccaacagt 3038263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 34835510 - 34835643
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||||| ||||  |    
T  34835510 atagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttatt 34835609  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| ||||||| ||||||||    
T  34835610 ctagcctcgatgtagacggtccccctggctcccc 34835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 34835776 - 34835909
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||| ||||| |||||||||||| ||||  |    
T  34835776 atagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtggttatt 34835875  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| ||||||| ||||||||    
T  34835876 ctagcctcgatgtagacggtccccctggctcccc 34835909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 3670095 - 3670207
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  3670095 atagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 3670194  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  3670195 ctagcctcgatgt 3670207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 18372117 - 18372005
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||||| ||||||||| |||| ||||| |||||||||||||||    
T  18372117 atagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcgcttgtgcggttgct 18372018  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||| ||||    
T  18372017 ctagcctcaatgt 18372005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 34834911 - 34835023
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  34834911 atagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 34835010  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  34835011 ctagcctcgatgt 34835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 32305512 - 32305647
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| | |||| | || ||| ||| |||| |    
T  32305512 atagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtctttattacttatgcagttgtt 32305611  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctc 154  Q
    ||||||| ||||| ||| ||||||| | ||||||||    
T  32305612 ctaaccttgatgtggacggtccccctgactcccctc 32305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 40518108 - 40518239
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||| ||||||||| | |||||||||||||||| ||||| |||    
T  40518108 agtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttct 40518207  T
Q  121 aacctcgatgttgacagtcccccaggctcccc 152  Q
    | ||| ||||| ||| |||||||  |||||||    
T  40518208 agccttgatgtggacggtcccccgagctcccc 40518239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 30359646 - 30359756
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||| ||||||||||| ||| |||||||| |||    
T  30359646 agtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctcttacttatgcggttgttct 30359745  T
Q  121 aacctcgatgt 131  Q
    ||| |||||||    
T  30359746 aacttcgatgt 30359756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 33113490 - 33113388
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||| |    
T  33113490 atagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgctagtgtggttgtt 33113391  T
Q  119 cta 121  Q
    |||    
T  33113390 cta 33113388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 40579629 - 40579496
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||| | ||||||||| |||||||| |||||||| |||||| |    
T  40579629 atagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctctattgcttgtacggttgtt 40579530  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| |||  ||| ||| |||||||    
T  40579529 ctatcctcgatgtggacgatcctccatgctcccc 40579496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 1014368 - 1014256
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | || ||||||  |||||| ||||||||| ||||||||| |||||||||||||| |    
T  1014368 atagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaagagtgtggtgtctctcctgcttgtgcggttgtt 1014269  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  1014268 ctagcctcgatgt 1014256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 45122180 - 45122068
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| |||||| ||||||||| ||||||||||| |||||| ||||| |    
T  45122180 atagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctctcttacttgtggggttgtt 45122081  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  45122080 ctagcctcgatgt 45122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 45122659 - 45122771
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| || |||||| | |||||||||||||||| ||||| |    
T  45122659 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgcttgtgtggttgtt 45122758  T
Q  119 ctaacctcgatgt 131  Q
    | | |||||||||    
T  45122759 caagcctcgatgt 45122771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 45122033 - 45121898
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||| | |||||| ||||| ||| ||||  |    
T  45122033 atagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgtctcttttgctcgtgtggttatt 45121934  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctc 154  Q
    | | ||||||||| ||  ||||||||||||||||||    
T  45121933 caagcctcgatgtggaaggtcccccaggctcccctc 45121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 147488 - 147581
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggt 114  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||| ||||||||| | ||||||||||||||||||||    
T  147488 agtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgtctctcttgcttgtgcggt 147581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 5915928 - 5916025
Alignment:
Q  45 taagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccc 142  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||| ||| ||||||    
T  5915928 taagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 5916025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 37544613 - 37544501
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||| | ||||| |||||| ||||||||| |||||| |||| |||||||||||| |    
T  37544613 atagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtctttcttacttgtgcggttgtt 37544514  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  37544513 ctagcctcgatgt 37544501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 9608782 - 9608892
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||| |||||| || |||||| | |||||||||||| ||| ||||| |||    
T  9608782 agtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctctcttgctagtgaggttgttct 9608881  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  9608882 agcctcgatgt 9608892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 8918885 - 8918764
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||| |||||||||   |||| |||||| |||| ||||| | |    
T  8918885 agtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtgtgacgtctttcttgcgtgtgtggttgtttt 8918786  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    ||||||||||| ||| ||||||    
T  8918785 aacctcgatgtggacggtcccc 8918764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 30359308 - 30359397
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||| ||||||    
T  30359308 agtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctttcttgtg 30359397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 1514036 - 1513912
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||| ||| ||||| || |||||||| | |||| ||||  |||    
T  1514036 agtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgtggtatctctcttacatgtggggttattct 1513937  T
Q  121 aacctcgatgttgacagtcccccag 145  Q
    | ||||||||| ||| |||||||||    
T  1513936 agcctcgatgtggacggtcccccag 1513912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 6876983 - 6876852
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| ||||| |||||||| || ||||| |||| | |||||| ||||||||| |||| ||||||| ||||| ||||| |||    
T  6876983 agtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttgggtaagagtgtggtgtttctcttgtttgtgtggttgttct 6876884  T
Q  121 aacctcgatgttgacagtcccccaggctcccc 152  Q
    | ||||||||| ||| |||||||  |||||||    
T  6876883 agcctcgatgtggacggtcccccgagctcccc 6876852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 25561937 - 25561826
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt-ggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||| || |||||||||    ||||||||||||||| ||||||||    
T  25561937 agtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaagagtgtgacatctctcttgcttgtgtggttgctc 25561838  T
Q  120 taacctcgatgt 131  Q
    || |||||||||    
T  25561837 tagcctcgatgt 25561826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 40518619 - 40518738
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||| |||||||||   ||| |||||||||||| ||||| |||    
T  40518619 agtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtgtgacgtcactcttgcttgtgtggttgttct 40518718  T
Q  121 aacctcgatgttgacagtcc 140  Q
    | |||| |||| ||| ||||    
T  40518719 agcctcaatgtggacggtcc 40518738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 40579352 - 40579258
Alignment:
Q  59 aacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccct 153  Q
    |||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||| ||||||||| ||| |||||||  ||||||||    
T  40579352 aacccattgccttaggattttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggactgtcccccgagctcccct 40579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 70395 - 70290
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||| | |||||||||   |||| ||||||||||| ||||| |||    
T  70395 agtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtgtgacgtctatcttgcttgtgtggttgttct 70296  T
Q  121 aacctc 126  Q
    ||||||    
T  70295 aacctc 70290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 1013994 - 1013882
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||   |||||  |||||||||  ||||||| || |||||||||||| |    
T  1013994 atagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctcttttacttgtgcggttgtt 1013895  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  1013894 ctagcctcgatgt 1013882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 6651555 - 6651641
Alignment:
Q  45 taagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    |||||| |||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  6651555 taagagaacccataaattcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgt 6651641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 6731953 - 6732042
Alignment:
Q  42 aagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||| |||||||||  |||||||||||| |||||  ||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  6731953 aagtaagagaacccataaattcattgccttaaggttttgagtaagagtgtggtgtctctcttgcttatgcggttgttctaacctcgatgt 6732042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 9609122 - 9609222
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||  |||| | ||||||||| | |||||||||||| ||| ||||| |||    
T  9609122 agtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctcttgctagtgtggttgttct 9609221  T
Q  121 a 121  Q
    |    
T  9609222 a 9609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 9309392 - 9309537
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||| | | || ||||||||| ||||||||| |   | || ||||| |||    
T  9309392 agtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctctc-tcagtatgtggttgttct 9309490  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||| |||||||  ||||||| |||| ||||||||||    
T  9309491 agcctcgatgtggacggtcccccgagctcccc-cagtgacccaacagt 9309537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 9507819 - 9507898
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctct 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||    
T  9507819 agtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctct 9507898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 43398192 - 43398079
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagagga---cccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgc 117  Q
    ||||||||||||||||||||||| ||||||||   ||||||||  |||||||||||  |||||||||||| ||| | || ||| || || ||||||||||    
T  43398192 agtaaaggttgaacaccttataaataagaggaggacccataaattcattgccttaaagttttggataagaatgtggcgtttcttttactagtgcggttgc 43398093  T
Q  118 tctaacctcgatgt 131  Q
    ||||||||||||||    
T  43398092 tctaacctcgatgt 43398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 45121777 - 45121659
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |  |||||||| |||||  |||||||||  | |||||||| ||| || ||||| |||    
T  45121777 agtaaaggttgatcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctctcttacttatggggttgttct 45121678  T
Q  121 aacctcgatgttgacagtc 139  Q
    | ||||||||| |||||||    
T  45121677 agcctcgatgtggacagtc 45121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 5420686 - 5420807
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||   |||||||||   ||||| ||  |||||| ||||| |    
T  5420686 atagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtgacgtctccctcacttgtgtggttgtt 5420785  T
Q  119 ctaacctcgatgttgacagtcc 140  Q
    | | ||||||||| ||| ||||    
T  5420786 caagcctcgatgtggaccgtcc 5420807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 41129066 - 41129159
Alignment:
Q  62 ccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    |||||| |||||| |||||| || |||||| ||||||||||| |||||| ||||| || ||||||||||| ||| |||||||||||||||||||    
T  41129066 ccattgtcttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtcccccaggctcccctca 41129159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 18380149 - 18380020
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    ||||| || |||||||||||||||||||||||||||||| || || ||||||||| | ||||||| |||||  ||||||||| |||   |||||||||||    
T  18380149 tcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaagagtgtggtg--cctcttgcttgt 18380052  T
Q  110 gcggttgctctaacctcgatgttgacagtccc 141  Q
    ||| ||  |||| | ||||||| |||||||||    
T  18380051 gcgattcttctagcttcgatgtggacagtccc 18380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 9620790 - 9620666
Alignment:
Q  28 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcg 127  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||||||||||||  |||||||| |  |||||||||  |||||| ||||||||   ||| |    
T  9620790 gttgatcactttataagtgagaggacccataaactcattgccttaagatttt--ataagagtttgatgtctctctcacttgtgtggttgctcaggcctgg 9620693  T
Q  128 atgttgacagtcccccaggctcccctc 154  Q
    |||| ||| ||||||| ||||||||||    
T  9620692 atgtggacggtcccccgggctcccctc 9620666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 32640630 - 32640543
Alignment:
Q  44 gtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||| | ||||||||||||| || | ||| |||| |||||||||    
T  32640630 gtaagaggaccgataaacccattgccttaaggttttgggtaagagtgttgcgtctctcttgcttttgtgattgttctagcctcgatgt 32640543  T

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Target: chr8; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3037831 - 3037774
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagat 76  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  3037831 atagtaaatgttgaacaccttataagtaagaggactcataaacccattgtcttaagat 3037774  T

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Target: chr8; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 41972195 - 41972293
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatt---ttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| |||  ||   |||| ||||||||| | ||| |||||||||||| |||||    
T  41972195 agtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttgttgggtaagagtgtggcgtcactcttgcttgtgtggttg 41972293  T

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Target: chr8; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 45123041 - 45123165
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagag--tgtagtgtctctcttgcttgtgcggttg 116  Q
    |||||||||||| |||||||||  ||||||| |||||||||||| |||  |||||| |||||| ||||||  ||| |||||||||||  ||||| |||||    
T  45123041 atagtaaaggttaaacacctta--agtaagatgacccataaacctattttcttaaggttttgggtaagagagtgtggtgtctctcttatttgtggggttg 45123138  T
Q  117 ctctaacctcgatgttgacagtccccc 143  Q
     ||||| |||||||| ||| |||||||    
T  45123139 ttctaatctcgatgtggacggtccccc 45123165  T

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Target: chr8; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 147888 - 147967
Alignment:
Q  52 acccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||||| ||||||||||| |||||| ||||||||| ||||||||||| ||||||| |||| |||| |||| ||||    
T  147888 acccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgcagttgttctagcctcaatgt 147967  T

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Target: chr8; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 8919220 - 8919141
Alignment:
Q  66 tgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccag 145  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||| ||||| |||| | ||||||| ||| |||||||||    
T  8919220 tgccttaaggttttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtcccccag 8919141  T

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Target: chr8; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 18371779 - 18371672
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||     ||||||||| |||||||||||||| ||||||||| |||||| ||||||||| |||| |||||   |||||||||||||    
T  18371779 atagtaaaggttgaaca----ttaagtaagaagacccataaaccca-tgccttaaggttttgggtaagagtgtggtgtgtctctcatttgtgcggttgct 18371685  T
Q  119 ctaacctcgatgt 131  Q
    ||| | |||||||    
T  18371684 ctagcttcgatgt 18371672  T

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Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 27856168 - 27856249
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||| ||||||| |||  ||||||  ||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  27856168 agtagaggttgagcacaatataagatagaggactcataaacccactgccttaagattttggataaaagtgttgtgtctctct 27856249  T

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Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 9309016 - 9309076
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 81  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||    
T  9309016 agtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgg 9309076  T

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Target: chr8; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 43274900 - 43274824
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtc 97  Q
    ||||||||||||| |  ||||||||||||||||||||||||| |||| |||||| |||||  ||||||||| |||||    
T  43274900 agtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaagagtgtggtgtc 43274824  T

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Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 4154782 - 4154690
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||||| | ||||||||||||| |||||||  ||| |||||| ||||||||| | |||||||  ||||||| |||||||||    
T  4154782 aggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggtaagagtgtggcgtctctc--gcttgtgtggttgctct 4154690  T

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Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 41416294 - 41416251
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacc 62  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  41416294 atagtaaaggttgaacaccttataagtaagaggatccataaacc 41416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18372725 - 18372676
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgcc 69  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18372725 atagtaaaggttgaacac-ttataagtaagaggactcataaacccattgcc 18372676  T

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Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18373054 - 18373004
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgcc 69  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  18373054 atagtaaaggttgaacaccttataaataagaggactcataaactcattgcc 18373004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 18373292 - 18373238
Alignment:
Q  20 tagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 74  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||    
T  18373292 tagtaaaggttgaacaccttataaataagaggatccattaacccattgtcttaag 18373238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 40417820 - 40417738
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||| ||| | |||| ||||||| |||||||||||||||| ||||| ||||||||||  |||||| | |||||||    
T  40417820 ttataagtaagatgactcgtaaatccattgcgttaagattttggataaaagtgtggtgtctctctcacttgtgtgattgctct 40417738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 18372822 - 18372785
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggaccca 56  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18372822 atagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 4154396 - 4154321
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||| |||||||| |||| |||||||||| ||||||||||| ||||||| |||| ||||  |||||||||    
T  4154396 aggttgaacactttataagtgagag-acccataaactcattgccttaatattttgggtaagtgtgtgatgtctctct 4154321  T

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Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 5274817 - 5274911
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||| |  || ||||||||||  ||||||||||||||||||  |||||||||  ||||||| | |||||||  ||||||||    
T  5274817 aggttgaacactttataaatgggaagacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctatcgcttgtgttgttgctct 5274911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 12283957 - 12284019
Alignment:
Q  69 cttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    |||||| |||||||||||||||||||||||||||  |||||| ||||| |||| |||| ||||    
T  12283957 cttaaggttttggataagagtgtagtgtctctctcacttgtgtggttgttctagcctctatgt 12284019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 18372379 - 18372342
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggaccca 56  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18372379 atagtaaaggttgaacaccttataagtaagaagaccca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 25561765 - 25561729
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccat 57  Q
    |||||||||||||||||||||||||||||| ||||||    
T  25561765 agtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 8794150 - 8794229
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||| |||||||| ||||||||||||||||| |||||||| | |  |||||| |||||| | ||||||  ||||||||||    
T  8794150 taaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtgagagtgcggtgtctctct 8794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 18829928 - 18829893
Alignment:
Q  56 ataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||||||||| ||||||||||||||||||    
T  18829928 ataaacccattgccttaggattttggataagagtgt 18829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 20995497 - 20995438
Alignment:
Q  61 cccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||| |||||| ||||| ||| ||||||||||  |||||| |||||||||    
T  20995497 cccattgccttaaggttttgggtaagaatgtggtgtctctctcacttgtgtggttgctct 20995438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 40991795 - 40991850
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 81  Q
    ||||||||||| | |||||| |||||||||||||||||| ||||| ||| ||||||    
T  40991795 aggttgaacacttcataagtgagaggacccataaacccaatgcctcaaggttttgg 40991850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 16524446 - 16524502
Alignment:
Q  65 ttgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctcta 121  Q
    |||| ||||| |||||  ||||||||| ||||||||||| |||||| ||||||||||    
T  16524446 ttgctttaaggttttgagtaagagtgtggtgtctctcttacttgtgtggttgctcta 16524502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 18372342 - 18372270
Alignment:
Q  84 aagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacag-tcccccaggctcccctca 155  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||||| ||| | ||||||  ||||||||||    
T  18372342 aagagtgtggtgtctctctcgcttgtgcggttgctttagtctcgatgtggacggttcccccgagctcccctca 18372270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 37105950 - 37106093
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  37105950 tcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgcttgt 37106049  T
Q  110 gcggttgctctaacctcgatgttgacagtcccccaggctcccct 153  Q
     |||||| |||| ||||||||| ||| |||||||  ||||||||    
T  37106050 acggttgttctagcctcgatgtggacggtcccccgagctcccct 37106093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 42514686 - 42514832
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||| |||||| ||||| |||    
T  42514686 agtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttct 42514785  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||| |||||||  ||||||||| || ||||||||||    
T  42514786 agcctcgatgtggacggtcccccgagctcccctc-gtgacccaacagt 42514832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 14745790 - 14745657
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||  ||| ||||| |    
T  14745790 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcaagtgtggttgtt 14745691  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| |||||||||||  |||||||    
T  14745690 ctagcctcgatgtggacagtcccccgagctcccc 14745657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 41283598 - 41283449
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||| | |||||||||| ||||| ||||| |    
T  41283598 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctctcttgtttgtgtggttgtt 41283499  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||| ||||| ||| |||||||| |||||||||| | ||||||||||    
T  41283498 ctagccttgatgtggacggtcccccatgctcccctcacttacccaacagt 41283449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 36178728 - 36178616
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  36178728 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 36178629  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||| ||||    
T  36178628 ctagcctctatgt 36178616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 6421422 - 6421568
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||| ||||||||| |||||||||||||||||||||||| |||    
T  6421422 agtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttct 6421521  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    |  |||||||| ||| |||||||  ||||||||| || ||||||||||    
T  6421522 agtctcgatgtggacggtcccccgagctcccctc-gtgacccaacagt 6421568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 36178294 - 36178159
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||| |    
T  36178294 atagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctcttgcttgtgtggttgtt 36178195  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctc 154  Q
     || ||||||||| ||| |||||||  |||||||||    
T  36178194 atagcctcgatgtagacggtcccccgcgctcccctc 36178159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 5542757 - 5542615
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgt 109  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||| |||||||||||||||||    
T  5542757 tcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgt 5542658  T
Q  110 gcggttgctctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||||||| || |  |||||||| ||| |||||||  |||||||    
T  5542657 gcggttgttcaagtctcgatgtggacggtcccccgagctcccc 5542615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 15880300 - 15880410
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||| | |    
T  15880300 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgtttt 15880399  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  15880400 agcctcgatgt 15880410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 37106223 - 37106344
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||| ||||||||||||||| ||| |    
T  37106223 atagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcgattgtt 37106322  T
Q  119 ctaacctcgatgttgacagtcc 140  Q
    ||| ||||||||| ||| ||||    
T  37106323 ctagcctcgatgtggacggtcc 37106344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 5543121 - 5543009
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |    
T  5543121 atagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgtctctattgcttgtgcggttgtt 5543022  T
Q  119 ctaacctcgatgt 131  Q
    | | |||||||||    
T  5543021 caagcctcgatgt 5543009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 15511616 - 15511506
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||    
T  15511616 agtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttgcttgtgtggttgttct 15511517  T
Q  121 aacctcgatgt 131  Q
    |  ||||||||    
T  15511516 agtctcgatgt 15511506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 6422147 - 6422269
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| |||||||| |||| | ||||||||| |||||||||||||||||| ||||| |||    
T  6422147 agtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctcttgcttgtgtggttgttct 6422246  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| ||| |||||||    
T  6422247 agcctcgatgtggactgtccccc 6422269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 36006001 - 36005883
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||| | |||||||||||||||| ||||| |||    
T  36006001 agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaaagtgtggcgtctctcttgcttgtggggttgttct 36005902  T
Q  121 aacctcgatgttgacagtc 139  Q
    | ||||||||| |||||||    
T  36005901 agcctcgatgtggacagtc 36005883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 962635 - 962745
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||  |||| |||||||||||| ||||| |||    
T  962635 agtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggtaagagtgtgttgtcactcttgcttgtgtggttgttct 962734  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  962735 agcctcgatgt 962745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 33731685 - 33731795
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||| | ||||||||||||||| |||||||| |||    
T  33731685 agtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgtctctcttgcttatgcggttgttct 33731784  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  33731785 agcctcgatgt 33731795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 40679750 - 40679640
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| | ||||||||| |||||| ||||| |||    
T  40679750 agtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttct 40679651  T
Q  121 aacctcgatgt 131  Q
    |  ||||||||    
T  40679650 agtctcgatgt 40679640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 28531432 - 28531325
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||| ||||||   || ||| ||||||||| |    
T  28531432 aaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtgtggtgactctctcagttatgcagttgctctagc 28531333  T
Q  124 ctcgatgt 131  Q
    ||||||||    
T  28531332 ctcgatgt 28531325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 12529149 - 12529039
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||||  |||| |||||||  ||||||||||||||| ||||||||||| |||    
T  12529149 agtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaaagttttagataagaacgtagtgtctctcttgtttgtgcggttgttct 12529050  T
Q  121 aacctcgatgt 131  Q
    |||||| ||||    
T  12529049 aacctcaatgt 12529039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 23346274 - 23346407
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||| |||||||| |||| | |||||||||  ||||||||||||||||||||||| |||    
T  23346274 agtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgtctctcttgcttgtgcggttgttct 23346372  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||| ||||| ||| ||| |||  ||||||||||    
T  23346373 agcctagatgtggacggtcgcccgagctcccctca 23346407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 28254358 - 28254277
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||    
T  28254358 agtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 28254277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 35580842 - 35580714
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||  | |||||||||| ||||| ||||| ||||     
T  35580842 taaatgttgaacaccttataagtgagaggacc-ataaacccattgccttaaggttttgggtaagagtgcggcgtctctcttgtttgtggggttgttctag 35580744  T
Q  123 cctcgatgttgacagtcccccaggctcccc 152  Q
    ||||||||| ||| ||||||| | ||||||    
T  35580743 cctcgatgtggacggtccccctgactcccc 35580714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 3673122 - 3673249
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacag 137  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| |||||||||  |||||||||| || ||| ||||| |||| ||||||||| ||| |    
T  3673122 ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacgg 3673221  T
Q  138 tcccccaggctcccctcagtaacccaaca 166  Q
    |||||| |||||||| |||| ||||||||    
T  3673222 tccccctggctcccc-cagtgacccaaca 3673249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 6713013 - 6713136
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| |||| | |||||| |||||||||  |||||||||||||| || | ||| ||    
T  6713013 agtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctcttgcttatgggattgttc 6713112  T
Q  120 taacctcgatgttgacagtccccc 143  Q
    || ||||||||| ||| |||||||    
T  6713113 tagcctcgatgtggacggtccccc 6713136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 40163494 - 40163383
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgcctt-aagattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||||||||||||||||||||||||| ||||||| |||| | || ||| ||| |||||| ||| ||||| |||||||||||||||||| ||||| ||    
T  40163494 agtaaaggttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgtggttgttc 40163395  T
Q  120 taacctcgatgt 131  Q
    ||||||||||||    
T  40163394 taacctcgatgt 40163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 38796739 - 38796619
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagag--tgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||||  ||| | |||||| ||||||||| ||||| ||     
T  38796739 taaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtatgtggcgtctctattgcttgtgtggttgttca 38796640  T
Q  121 aacctcgatgttgacagtccc 141  Q
    | ||||||||| ||| |||||    
T  38796639 agcctcgatgtcgacggtccc 38796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 1769929 - 1770039
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||| || || |   |||| |||||||||| |||||||||||||||||| ||||| |||    
T  1769929 agtaaaagttgaacaccttataagtaagaggactcataaactcatagctttgaagctttgaataagagtgtggtgtctctcttgcttgtgaggttgttct 1770028  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  1770029 agcctcgatgt 1770039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 7598265 - 7598375
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| |||||| ||||| | | ||||||||||  |||||||||||| ||     
T  7598265 agtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcacttgtgcggttgttca 7598364  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  7598365 agcctcgatgt 7598375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 14745426 - 14745332
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||| || ||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||    
T  14745426 tcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttg 14745332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 168
Target Start/End: Original strand, 30313220 - 30313360
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacct 125  Q
    ||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||| ||||||||| | ||||||||  |||||| |||||||||  |||    
T  30313220 aggttgaacac-ttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtggcgtctctctcacttgtgtggttgctctggcct 30313318  T
Q  126 cgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
     ||| |||||  |||||| ||||| |||| || ||||||||||    
T  30313319 ggattttgacgatcccccgggctctcctc-gtgacccaacagt 30313360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 6421793 - 6421902
Alignment:
Q  46 aagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccag 145  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||  |||||| ||||| |||  ||||||||| ||| |||||||      
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtcccccga 6421892  T
Q  146 gctcccctca 155  Q
    ||||||||||    
T  6421893 gctcccctca 6421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 5367495 - 5367599
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||||||||||||||||||||||||| || |||| ||| |||  ||||||| |||||| ||||||||| | ||||||||||||||||| |||| |||| |    
T  5367495 aaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcagttgttctagc 5367594  T
Q  124 ctcga 128  Q
    |||||    
T  5367595 ctcga 5367599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 16542484 - 16542567
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||  |||||||||||  |||||||    
T  16542484 atagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttgagtaagagtgtagcatctctct 16542567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 36784365 - 36784287
Alignment:
Q  37 cttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggtt 115  Q
    ||||||||||||| ||||||||||||| ||| |||||| |||||||||| ||||| |||||||||||||||||| ||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggataaaagtgttgtgtctctcttgcttgtgtggtt 36784287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 3672773 - 3672882
Alignment:
Q  56 ataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||  ||||| ||||| ||||  |||||||| ||| || |||| ||||||||  |    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacggttcccctggctcccccta 3672872  T
Q  156 gtaacccaac 165  Q
    || |||||||    
T  3672873 gtgacccaac 3672882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 40733554 - 40733643
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    |||||| ||||||||||||||||||||||||||||||||||| |   ||||||  |||||| ||||||||| |||||||||| |||||||    
T  40733554 agtaaatgttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctctctcgcttgtg 40733643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 16590941 - 16591065
Alignment:
Q  42 aagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtccc 141  Q
    |||||||||||||||||||| |||||||||||| ||||   ||||| | || |||||||||| |||||| ||||| |||| |||| |||| ||||||| |    
T  16590941 aagtaagaggacccataaacacattgccttaaggttttaagtaagaatctaatgtctctcttacttgtggggttgttctagcctcaatgtggacagtctc 16591040  T
Q  142 ccaggctcccctcagtaacccaaca 166  Q
    ||  |||||||||| | ||||||||    
T  16591041 ccgagctcccctcaatgacccaaca 16591065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 29874139 - 29874047
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||| |||||||||||||||| | |||| ||   ||||||||||||||    
T  29874139 aggttgaacactttataattgggaggacccataaacccattgccttaaggttttggataagagtgtggcgtctatcccacttgtgcggttgct 29874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 36178392 - 36178320
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||    
T  36178392 atagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 29676572 - 29676687
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||| |||||||| |||||||| |||| |||||||||| |||||||||      |||| ||||||||| |||||||||||||||||| ||||  ||     
T  29676572 agtaaagattgaacacattataagtgagagaacccataaactcattgcctt------ttgggtaagagtgtggtgtctctcttgcttgtggggttattca 29676665  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    ||||||||||| ||| ||||||    
T  29676666 aacctcgatgtggacggtcccc 29676687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 31899549 - 31899496
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctta 72  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  31899549 atagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 37632720 - 37632575
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||  |||  ||||||||||||||||||||||||||||  | ||||| |||||| ||||||||| |||| |||||| |  ||| | ||| |    
T  37632720 atagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgggtaagagtgtggtgtatctcttacaagtgtgattgtt 37632621  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| |  |||| |||||||||||||  |||||||    
T  37632620 ctagcctcgatgtggacgg--cccctggctcccctcagtgtcccaaca 37632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 31259737 - 31259658
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctct 100  Q
    |||||||||| |||||||||||||||||| |||||||||||| ||  ||||||| |||||| ||||||||| || |||||    
T  31259737 agtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagtgtggtatctct 31259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 9231286 - 9231396
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||  |||||| |||||||| |||| ||||||  |||||||  |||||| |||||||||||| |||||||  ||| |||||||  |||    
T  9231286 agtaaaggttgaacatattataaataagaggatccatcaacccaccgccttaaagttttggttaagagtgtagtatctctctaacttatgcggttattct 9231385  T
Q  121 aacctcgatgt 131  Q
    ||||| |||||    
T  9231386 aaccttgatgt 9231396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 37894813 - 37894732
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||| | || ||||||||||||||| ||| |||||| |||||||||||||||||||| ||| ||||| |||| |||||    
T  37894813 agtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattttggttaaaagtgtggtgtgtctct 37894732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 29676940 - 29677055
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagagga-----cccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggtt 115  Q
    |||||||||| ||||||||||| || ||||||     ||||||||||||||||||||||  |||   ||||||||| |||||||||||  ||||| ||||    
T  29676940 agtaaaggtttaacaccttataggtgagaggagaagacccataaacccattgccttaaggctttaagtaagagtgtggtgtctctcttaattgtggggtt 29677039  T
Q  116 gctctaacctcgatgt 131  Q
    | || |||||||||||    
T  29677040 gttccaacctcgatgt 29677055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 30323506 - 30323581
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctc 101  Q
    ||||||||||| ||| |||| |||||||| |||||| |||||||||||| |||||| ||||||||| | |||||||    
T  30323506 aggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctc 30323581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 31385779 - 31385834
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 81  Q
    ||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||    
T  31385779 aggttgagcaccttataagtgaaaggacccataaacccattgccttaaggttttgg 31385834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 7598646 - 7598684
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataa 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7598646 agtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 33561567 - 33561502
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||| ||||| |||||||| ||||||||||||||| ||||| |||||| |||||| |||||||||    
T  33561567 aggttaaacactttataagtgagaggacccataaactcattgtcttaaggttttgggtaagagtgt 33561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 33953887 - 33953822
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||||| |||||||||    
T  33953887 aggttgaacactatataagtgagaggacccataaacctgttgccttaaaattttgggtaagagtgt 33953822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 37895180 - 37895107
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    |||| |||||| |||||| |||||| || || |||||||||||||||||||| |||||| ||||||||| ||||    
T  37895180 taaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgggtaagagtgtggtgt 37895107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 28254233 - 28254181
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 73  Q
    |||||||||||||||| |||||||||||||||| ||||||| | |||||||||    
T  28254233 agtaaaggttgaacactttataagtaagaggactcataaacactttgccttaa 28254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 29873653 - 29873514
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacct 125  Q
    ||||||||||  ||||||||  |||||| ||||||| |||||||||||| |||||  |||||||||   ||||||||  |||||| |||||||||   ||    
T  29873653 aggttgaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtgacgtctctctcacttgtgtggttgctctggtct 29873554  T
Q  126 cgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
     ||||| | | |||| || |||||||||| |||||||||||    
T  29873553 ggatgtaggcggtcctcctggctcccctc-gtaacccaaca 29873514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 2336666 - 2336721
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgg 81  Q
    ||||||||||| |||||||| ||||||||||||||  || ||||||||||||||||    
T  2336666 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgg 2336721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31468869 - 31468801
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||||||| | ||||||||    ||||||||||||| |||||||||||| |||||| |||||||||    
T  31468869 atagtaaaggttgaatatcttataag----aggacccataaactcattgccttaaggttttgggtaagagtgt 31468801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 6421688 - 6421758
Alignment:
Q  46 aagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    ||||||||||||||||| |||| || ||| |||||| ||||||||| ||||||||||  |||||| |||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttg 6421758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 40733920 - 40734041
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||| || |||||||||||||||||||| | ||| |||| |  |||||||  |||||| ||||||||| |||||| ||| ||||||| ||||| ||     
T  40733920 agtaaagatttaacaccttataagtaagagggctcat-aacctacagccttaaagttttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttca 40734018  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    |  |||||||| ||| |||||||    
T  40734019 agtctcgatgtggacggtccccc 40734041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 38796339 - 38796298
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacc 62  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  38796339 agtaaatgttgaacaccttataagtaagaggacctataaacc 38796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 41678483 - 41678408
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||| ||||| |||||||| |||||||||||||| || |||||||||| |||||  ||||||||||  ||||||||    
T  41678483 aggttaaacactttataagtgagaggacccataaa-cctttgccttaaggttttgagtaagagtgtaacgtctctct 41678408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 3594294 - 3594229
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||| |||||| |||||||| | |||| |||||||| |||||| |||||||||||  |||||||||    
T  3594294 aggtcgaacactttataagtgataggatccataaacacattgctttaagattttgagtaagagtgt 3594229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 2110014 - 2110066
Alignment:
Q  114 ttgctctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||||||||  |||||||| ||| ||||||| | ||||||||||||||||||||    
T  2110014 ttgctctagtctcgatgtggacggtccccctgactcccctcagtaacccaaca 2110066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 35580534 - 35580494
Alignment:
Q  48 gaggacccataaacccattgccttaagattttggataagag 88  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagag 35580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 9e-44; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 44290948 - 44290798
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggat-aagagtgtagtgtctctcttgcttgtgcggttgc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| |||| |||||||||||||||||||     
T  44290948 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtgtatctcttgcttgtgcggttgt 44290849  T
Q  118 tctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    |||| ||||||||| ||| |||||||  ||||||| || | ||||||||||    
T  44290848 tctagcctcgatgtggacggtcccccgagctccccccactgacccaacagt 44290798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 44290581 - 44290435
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||| |||||||||| |||||| |    
T  44290581 atagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtatggtgtctttcttgcttgtacggttgtt 44290482  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| |||||||  ||||||| |||| ||||||||    
T  44290481 ctagcctcgatgtggacggtcccccgagctcccc-cagtgacccaaca 44290435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 29798234 - 29798359
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| |||||||||||||  ||| ||||| |    
T  29798234 atagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctctcttgcaagtgtggttgtt 29798333  T
Q  119 ctaacctcgatgttgacagtccccca 144  Q
    ||||||||||| | ||| ||||||||    
T  29798334 ctaacctcgatatagacggtccccca 29798359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 34364964 - 34365072
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||| |||| ||| ||||||||||    
T  34364964 taaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcagttgctctaa 34365063  T
Q  123 cctcgatgt 131  Q
    |||||||||    
T  34365064 cctcgatgt 34365072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 3537722 - 3537599
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |||||| ||||||||| | |||||||||||||||||||||| |    
T  3537722 atagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgtt 3537623  T
Q  119 ctaacctcgatgttgacagtcccc 142  Q
    ||| ||||||||| ||| ||||||    
T  3537622 ctagcctcgatgtggacggtcccc 3537599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 41157028 - 41157175
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||| |||||||| ||||||||| ||||| |||    
T  41157028 agtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctctattgcttgtgtggttgttct 41157127  T
Q  121 aacctcgatgttgacagtccccc-aggctcccc-tcagtaacccaaca 166  Q
    | ||||||||| | | ||||||| ||||||||| ||||| ||||||||    
T  41157128 agcctcgatgtgggcggtcccccaaggctccccttcagtgacccaaca 41157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 17294614 - 17294748
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgc-ggttgctc 119  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||| ||| ||||||||    
T  17294614 agtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcgcttatgcaggttgctc 17294713  T
Q  120 taacctcgatgttgacagtcccccaggctcccctc 154  Q
    || ||||||||| ||| ||| |||  |||||||||    
T  17294714 tagcctcgatgtggacggtcgcccgagctcccctc 17294748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 9955945 - 9956092
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccat-aaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||  ||||||||||||||||||||||||||    
T  9955945 agtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgatgtctctcttgcttgtgcggttgctc 9956044  T
Q  120 taacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    || |||||||||   | |||||| |||||| |||| || ||||||||||    
T  9956045 tagcctcgatgtgagcggtcccctaggctctcctc-gtgacccaacagt 9956092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 38804476 - 38804370
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  38804476 agtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctcttgcttgtgcggttgttct 38804377  T
Q  121 aacctcg 127  Q
    | |||||    
T  38804376 agcctcg 38804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 14318902 - 14319026
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||| |||||| ||||||||| |||||||||||  ||||||||||| |    
T  14318902 atagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctcttatttgtgcggttgtt 14319001  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| |||| |||| ||| |||||||    
T  14319002 ctagcctcaatgtggacggtccccc 14319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 34364542 - 34364654
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||| |||||| |||||||||  ||||||||| |||| ||||||||||    
T  34364542 atagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggtaagagtgtgatgtctctctcgcttatgcggttgct 34364641  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  34364642 ctagcctcgatgt 34364654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 40082442 - 40082588
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| | |||||  |||||||||||| |||||| ||||||||| || ||||||||||||||||| ||| |    
T  40082442 atagtaaaggttgaacaccttataagtaagaggatc-ataaattcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgtgcgtttgtt 40082540  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| || ||||| ||  ||||||| |||| ||||||||    
T  40082541 ctagcctcgatgtggatagtcctccgagctccccccagtgacccaaca 40082588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 41142409 - 41142532
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||| ||||| ||    
T  41142409 agtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcgtctctcttgcttgtgtggttgttc 41142508  T
Q  120 taacctcgatgttgacagtccccc 143  Q
    || ||||||||| ||| |||||||    
T  41142509 tagcctcgatgtggacggtccccc 41142532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 26661643 - 26661521
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||| ||||||| ||||| ||     
T  26661643 agtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtggttgttca 26661544  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||| | ||| |||||||    
T  26661543 agcctcgatatggacggtccccc 26661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 41157412 - 41157522
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||  ||||||||| |||||| ||||||||||| ||||| |||    
T  41157412 agtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgtctgtcttgcttgtgtggttgttct 41157511  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  41157512 agcctcgatgt 41157522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 5320086 - 5319965
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||||||||| || ||||| |||    
T  5320086 agtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttgcttatgtggttgttct 5319987  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    | |||| |||| ||| ||||||    
T  5319986 agcctcaatgtagacggtcccc 5319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 32168815 - 32168674
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||      ||||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||||||||||||| |    
T  32168815 atagtaaaggttgaacacctta------agaggacccataaacccattgccttgaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgtt 32168722  T
Q  119 ctaacctcgatgttgacagtcccc-caggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||||||||||  |||||||||| ||| ||||||||    
T  32168721 ctagcctcgatgtggacagtcccctaaggctcccct-agtgacccaaca 32168674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 48588611 - 48588486
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||| |||||| ||||||||  ||||||||||| |||||||||||| |    
T  48588611 atagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctcttacttgtgcggttgtt 48588512  T
Q  119 ctaacctcgatgttgacagtccccca 144  Q
    ||| ||||||||| ||| ||| ||||    
T  48588511 ctagcctcgatgtggacggtcgccca 48588486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 50052146 - 50051999
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  |||||  |||||| ||||||||| |||||||||||| || ||  |||| |    
T  50052146 atagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgtctctcttgtttatg-tgttgtt 50052048  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||||||||||||| |||||||||||  ||||||||| || ||||||||||    
T  50052047 ctaacctcgatgtggacagtcccccgagctcccctc-gtgacccaacagt 50051999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 32594839 - 32594747
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||| ||||||||||| |||||||    
T  32594839 atagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgc 32594747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 37556147 - 37556258
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  37556147 atagtaaaggttgaacatcttataagtaagaggacc-ataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 37556245  T
Q  119 ctaacctcgatgt 131  Q
    | | |||||||||    
T  37556246 caagcctcgatgt 37556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 3550755 - 3550842
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgct 106  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||| ||||||||||||||    
T  3550755 atagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttgct 3550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 26662019 - 26661924
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    ||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||| |||||    
T  26662019 agtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttg 26661924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 31767282 - 31767136
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||| |||||||||   |||| ||||||||||| ||||| |||    
T  31767282 agtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggtaagagtgtgacgtctatcttgcttgtgtggttgttct 31767183  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    |  |||||||| ||| |||||||| ||| |||||| | ||||||||||    
T  31767182 agactcgatgtggacggtcccccaagcttccctca-tgacccaacagt 31767136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 41759518 - 41759641
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||||||||||||||||| || ||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| || ||||| |    
T  41759518 atagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgtt 41759617  T
Q  119 ctaacctcgatgttgacagtcccc 142  Q
    ||| ||| ||||| ||| ||||||    
T  41759618 ctagccttgatgtggacggtcccc 41759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 45084419 - 45084547
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||       | |||||| |||||| |||||| || |||||||||||||||||||||||| |||    
T  45084419 agtaaaggttgaacaccttataagtaagaggacccataac------gtcttaaggttttgggtaagagagtggtgtctctcttgcttgtgcggttgttct 45084512  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||||||  ||| |||||||||||| ||||||    
T  45084513 aacctcgatgcggacggtcccccaggcttccctca 45084547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 22077231 - 22077101
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||   ||||| ||  ||| |||||||| ||     
T  22077231 agtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcacttatgcggttgttca 22077132  T
Q  121 aacctcgatgttgacagtcccccaggctccc 151  Q
    | ||||||||| ||| |||||||||||||||    
T  22077131 agcctcgatgtggacggtcccccaggctccc 22077101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 37850721 - 37850588
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||| ||||||||||||||||||||||||| ||||||||||| | ||  ||||| ||| |||||||||||| ||||||||||  ||||||||||||||||    
T  37850721 agtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggataagagtgtggtgtctctctcacttgtgcggttgctct 37850622  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||||| ||| |||||| | ||||||||||    
T  37850621 agcctcgatgtggacggtccccta-gctcccctca 37850588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 44043895 - 44043810
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  44043895 atagtaaatgttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttg 44043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 22077616 - 22077484
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||| ||||||||| | ||||||||  ||| |||||||| ||     
T  22077616 agtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctctctcacttatgcggttgttca 22077517  T
Q  121 aacctcgatgttgacagtcccccaggctcccct 153  Q
    | | ||||| | ||| |||||||||||||||||    
T  22077516 agcatcgatatggacggtcccccaggctcccct 22077484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 66593 - 66447
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||| ||||||||  || |||||||| |||||| ||||||| ||| |||||||| ||||||||||||| |||    
T  66593 agtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggtaagagtatagcgtctctctcgcttgtgcggttgttct 66494  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | |||| |||| ||| ||   ||| |||||||||| | ||||||||||    
T  66493 agcctcaatgtggacggttatccaagctcccctca-tgacccaacagt 66447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 5575141 - 5575284
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| || ||||| |||||||||||||||| | ||||||||  ||| || ||| | |||    
T  5575141 agtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagtgtggcgtctctct--cttatgaggtagttct 5575238  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    | ||||||||| ||  ||||||||| ||| ||||||| ||||||||    
T  5575239 agcctcgatgtggaatgtcccccagactctcctcagtgacccaaca 5575284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 11977317 - 11977439
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||||||||||||||| || |||||||| | ||||||||| |||||| |||||||||  ||||||||||||  ||||||||| |||    
T  11977317 agtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgtctctcttgcaagtgcggttgttct 11977416  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| ||| |||||||    
T  11977417 agcctcgatgtggacggtccccc 11977439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 45494101 - 45493948
Alignment:
Q  19 atagtaaaggttgaacacc----ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggt 114  Q
    |||||||||||||||||||     ||||||||||| || ||||||||||||||||||||  |||||||||||||||| ||||||||||| ||| || |||    
T  45494101 atagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgccttaaagttttggataagagtgtggtgtctctcttccttatgtggt 45494002  T
Q  115 tgctctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagta 169  Q
    || || | ||||||||| ||| |||||||| ||||||| || | |||||||||||    
T  45494001 tgttcaagcctcgatgtggacggtccccca-gctccccccaatgacccaacagta 45493948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 39066321 - 39066199
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| ||||| ||||||||||  ||||| |||||| |||||||||||||||| ||||||||||| ||| || ||||| |||    
T  39066321 agtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggataagagtgtggtgtctctcttacttatgtggttgttct 39066222  T
Q  121 aacctcgatgttgacagtccccca 144  Q
    | ||| |||| |||| ||||||||    
T  39066221 agccttgatg-tgacggtccccca 39066199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 3875452 - 3875318
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| | ||||| ||| | ||||||||  || ||| ||||| |||    
T  3875452 agtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctctctcactagtgtggttgttct 3875353  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||||| ||| |||| ||  ||||||||||    
T  3875352 agcctcgatgtggacggtcctccgagctcccctca 3875318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 34649475 - 34649597
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||   || ||||||||||| | ||||||||| |||||| ||||||||  | |||||||||||| ||| ||||| |||    
T  34649475 agtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaagagtgaggcgtctctcttgctagtgtggttgttct 34649574  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| ||| |||||||    
T  34649575 agcctcgatgtggacggtccccc 34649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 41184548 - 41184493
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 74  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41184548 atagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaag 41184493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 24600435 - 24600313
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||  ||||||||||||| || ||||||| ||||| |||||| |||||  ||||||||| |||||||||| ||| ||  ||||| |||    
T  24600435 agtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgtaagagtgtggtgtctctctcgctagtatggttgttct 24600336  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| |||||| ||||    
T  24600335 agcctcgatgtggacagttcccc 24600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 37555765 - 37555876
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||| ||||||||| || |||||||||||||||||  |||| || | |||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  37555765 atagtgaaggttgaatacattataagtaagaggacct-taaatccttagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 37555863  T
Q  119 ctaacctcgatgt 131  Q
    | | |||||||||    
T  37555864 caagcctcgatgt 37555876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 45839678 - 45839813
Alignment:
Q  31 gaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatg 130  Q
    ||||||||||||||||||| ||||||||||   | ||||||||| |||||| ||||| ||| |||||||||||||||||| | ||| |||  ||||||||    
T  45839678 gaacaccttataagtaagaagacccataaatgtaatgccttaaggttttgggtaagattgtggtgtctctcttgcttgtgggattgttctggcctcgatg 45839777  T
Q  131 ttgacagtccc-ccaggctcccctcagtaacccaaca 166  Q
     ||| |||||| |  ||||||||||| ||||||||||    
T  45839778 -tgatagtccctcttggctcccctcaataacccaaca 45839813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 66209 - 66138
Alignment:
Q  21 agtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||||| |||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||    
T  66209 agtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgggtaagagtgt 66138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 22077947 - 22077818
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||| ||| || ||||||||| | |||||| |  ||| |||||||| || |     
T  22077947 taaaggttgaacatcttataagtaagaggacccataaactcatagcc-taaggtttggggtaagagtgtggcgtctctttcacttatgcggttgttcaag 22077849  T
Q  123 cctcgatgttgacagtcccccaggctcccct 153  Q
    | ||||||| ||| |||| ||||||||||||    
T  22077848 catcgatgtggacggtcctccaggctcccct 22077818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 19283571 - 19283466
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacct 125  Q
    ||||||| ||| || ||| | ||||||| ||||||| ||| |||||||| |||||||||||||||| | ||||||||  ||||||||||||||||| |||    
T  19283571 aggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggttttggataagagtgtggcgtctctctcacttgtgcggttgctctagcct 19283472  T
Q  126 cgatgt 131  Q
     |||||    
T  19283471 ggatgt 19283466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 3537270 - 3537226
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaaccc 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3537270 atagtaaaggttgaacaccttataagtaagaggacccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 5528875 - 5528765
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| ||||||| ||||||||| ||||||| ||||  |||||| |||||| |||  |||| | |||||||||  || |||||||| |||    
T  5528875 agtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtggcgtctctcttctttatgcggttgttct 5528776  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  5528775 atcctcgatgt 5528765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 4956228 - 4956340
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt--agtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||  |||  |||| | ||| |||||   || | ||||||||||||||| |||||    
T  4956228 agtaaaggttgaacatcttataagtaagaggatccataaactcattgctctaaagttttaggtaaaagtgtgacgtctatctcttgcttgtgcgattgct 4956327  T
Q  119 ctaacctcgatgt 131  Q
     ||||||||||||    
T  4956328 ttaacctcgatgt 4956340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 10351202 - 10351278
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||| |||||||| |||| |||||||||| |||| | |||||||||||| ||||||||| | ||||||||    
T  10351202 aggttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagtgtggcgtctctct 10351278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 11977015 - 11977103
Alignment:
Q  55 cataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtccccc 143  Q
    |||||||| | ||||||||| |||||| ||||||||| |||||||||||||  ||||||| | |||| ||||||||| ||| |||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtccccc 11977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 24132106 - 24131999
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||  ||||| ||  ||||| ||||||||||  || ||| ||||| |||    
T  24132106 agtaaaggttgaacaccttataaataaggggatccataaactcattgccttaag-gtttgggta--agtgtggtgtctctctcactagtgtggttgttct 24132010  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  24132009 agcctcgatgt 24131999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 21378162 - 21378118
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccat 65  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  21378162 agtaaaggttgaatatcttataagtaagaggacccataaacccat 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 30630757 - 30630690
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtg 90  Q
    ||||||||  |||| ||||||||||||| |||||||||| |||||||||||  |||||| ||||||||    
T  30630757 taaaggtttgacactttataagtaagagaacccataaacacattgccttaaagttttgggtaagagtg 30630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 41184197 - 41184156
Alignment:
Q  33 acaccttataagtaagaggacccataaacccattgccttaag 74  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  41184197 acactttataagtaagaggatccataaacccattgccttaag 41184156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 44685493 - 44685546
Alignment:
Q  21 agtaaaggtt-gaacaccttataagtaagaggacccataaacccattgccttaa 73  Q
    |||||||||| ||| |||||||||||||||||||| |||||| |||||||||||    
T  44685493 agtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 44685546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 22793315 - 22793411
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaaccca-ttgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    |||| |||||||| || |||||||| |||||| ||||||||||| |||||||| | |||||  |||||||||   ||||||||| |||||| |||||    
T  22793315 agtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagtaagagtgtgacgtctctcttacttgtgtggttg 22793411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 24448321 - 24448384
Alignment:
Q  28 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||  |||||||| ||||| | ||||||| ||||| ||||||||||||||||| |||||    
T  24448321 gttgaacattttataagtgagagggctcataaactcattgtcttaagattttggataaaagtgt 24448384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 50051776 - 50051677
Alignment:
Q  54 ccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccct 153  Q
    |||||||||||||  |||||| |||||  ||||||||| |||||||||||| || ||  |||| |||| | ||||||| ||| |||||||  ||||||||    
T  50051776 ccataaacccattatcttaaggttttgcgtaagagtgtggtgtctctcttgtttatg-tgttgttctagcatcgatgtggacggtccccctagctcccct 50051678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 4e-43; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 25483371 - 25483519
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| |    
T  25483371 atagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgtt 25483470  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    ||| ||||||||| ||| ||| ||| |||||||| |||| ||||||||||    
T  25483471 ctagcctcgatgtggacggtctccctggctcccc-cagtgacccaacagt 25483519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 50630876 - 50630731
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  50630876 atagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 50630777  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaa 164  Q
     || ||||||||| | | |||| ||  |||||||||| | ||||||    
T  50630776 ttagcctcgatgtgggcggtccgcctagctcccctcactgacccaa 50630731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 36629274 - 36629418
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| |||    
T  36629274 agtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttct 36629373  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaac 165  Q
    | ||||||||| ||| ||||| || |||||||||| | |||||||    
T  36629374 agcctcgatgtggacggtcccacatgctcccctcaatgacccaac 36629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 54108948 - 54109059
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  54108948 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag-ttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 54109046  T
Q  119 ctaacctcgatgt 131  Q
    ||| | |||||||    
T  54109047 ctagcttcgatgt 54109059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 41370392 - 41370516
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| | ||||| |    
T  41370392 atagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctctcttgcttgagtggttgtt 41370491  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  41370492 ctagcctcgatgtggacggtccccc 41370516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 55933245 - 55933113
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||| ||||| | |||| |    
T  55933245 atagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttacttgtacagttgtt 55933146  T
Q  119 ctaacctcgatgttgacagtcccccaggctccc 151  Q
    ||| ||||||||| ||| |||||||| ||||||    
T  55933145 ctagcctcgatgtggacggtcccccaagctccc 55933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 54936231 - 54936379
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||  | | || ||||| |    
T  54936231 atagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcac-tatgtggttgtt 54936329  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaacagta 169  Q
    ||| ||||||||| |||||||||||  ||||||| |||| |||||||||||    
T  54936330 ctagcctcgatgtggacagtcccccgagctcccc-cagtgacccaacagta 54936379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 3340844 - 3340990
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||| ||||||||||| ||||| |||    
T  3340844 agtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtctttcttgcttgtggggttgttct 3340943  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||| ||| ||   ||||||| |||| ||||||||||    
T  3340944 agcctcgatgtggacggtctcctgagctcccc-cagtgacccaacagt 3340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 39404055 - 39404202
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||| | |||||||||||||||| ||||| |||    
T  39404055 agtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggttgttct 39404154  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||| |||||||  |||||||||| ||| ||||||||    
T  39404155 agcctcgatgtggacggtcccccgagctcccctcactaatccaacagt 39404202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 4955438 - 4955336
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||||    
T  4955438 atagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttacttgtgcggttgct 4955339  T
Q  119 cta 121  Q
    |||    
T  4955338 cta 4955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 22028486 - 22028340
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||  |||||| ||||||||| |||||||||||||||||| ||||| ||||     
T  22028486 taaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctag 22028387  T
Q  123 cctcgatgttgacagtccccc-aggctcccctcagtaacccaacagt 168  Q
    |||| |||| ||| ||||||| | |||||||||| | ||||||||||    
T  22028386 cctcaatgtggacggtcccccaaagctcccctcactgacccaacagt 22028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 52884730 - 52884843
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt-ggataagagtgtagtgtctctcttgcttgtgcggttgc 117  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||||     
T  52884730 atagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgcggttga 52884829  T
Q  118 tctaacctcgatgt 131  Q
    |||| |||||||||    
T  52884830 tctagcctcgatgt 52884843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 54017716 - 54017583
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| | |||||||||  |||||||||||||| || ||||| |    
T  54017716 atagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgtctctcttgcttatgtggttgtt 54017617  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| ||| |||  |||||||    
T  54017616 ctagcctcgatgtggacggtctccctagctcccc 54017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 44620695 - 44620830
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| ||  ||||||| |||||| ||||||||| || ||||||||||||||||||||| |    
T  44620695 atagtagaggttgaacactttataagtaagaggacccataaacc-ataaccttaaggttttgggtaagagtgtggtttctctcttgcttgtgcggttgtt 44620793  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctca 155  Q
     || ||||||||| ||| |||||||| ||||||||||    
T  44620794 atatcctcgatgtggacggtcccccaagctcccctca 44620830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 10245957 - 10246103
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||| ||||||||| ||||||| |||||||||  ||||| |||    
T  10245957 agtaaaggttgaacaccttataagtaagaggacc-ataaacccaaagccttaaggttttgggtaagagtgtggtgtctcccttgcttgtctggttgttct 10246055  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| |||  ||||||| |||||||||  | ||||||||||    
T  10246056 agcctcgatgtggacgctcccccaagctcccctcgctgacccaacagt 10246103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 22028077 - 22027946
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||| ||| |||||||||| |||| || ||||| | ||      
T  22028077 aaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctctcgcttatgtggttgttttagt 22027978  T
Q  124 ctcgatgttgacagtcccccaggctcccctca 155  Q
    |||||||| ||||||||| |||||||||||||    
T  22027977 ctcgatgtggacagtccctcaggctcccctca 22027946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 22183383 - 22183253
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||  |||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||  ||||| |||||| |||    
T  22183383 agtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgtctctctcacttgtacggttgttct 22183284  T
Q  121 aacctcgatgttgacagtcccccaggctccc 151  Q
    | ||||||||| ||| ||||||||| |||||    
T  22183283 agcctcgatgtggacggtcccccagactccc 22183253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 32941242 - 32941124
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||| |||||||||   |||||||||||||||||||||| |||    
T  32941242 agtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttct 32941143  T
Q  121 aacctcgatgttgacagtc 139  Q
    | ||||||||| |||||||    
T  32941142 agcctcgatgtggacagtc 32941124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 50002463 - 50002573
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| |||||| |||||| ||||||||| ||||||||||| |||||||||||| |||    
T  50002463 agtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttct 50002562  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  50002563 agcctcgatgt 50002573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 44620390 - 44620511
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||||||  ||| ||||||||||||| ||||| |||    
T  44620390 agtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtgatgtttctcttgcttgtgtggttgttct 44620489  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    ||||| ||||| ||| ||||||    
T  44620490 aaccttgatgtggacggtcccc 44620511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 44621039 - 44621160
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||| | ||||||| ||||| |||||| |||||| ||||||||| |||| ||||||||||||||||||  |||    
T  44621039 agtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtggtgtttctcttgcttgtgcggttattct 44621138  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    | ||||||||| ||| ||||||    
T  44621139 agcctcgatgtggacggtcccc 44621160  T

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Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 1731766 - 1731646
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||| |||| ||||||||||||| ||||| |||    
T  1731766 agtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgtttctcttgcttgtgtggttgttct 1731667  T
Q  121 aacctcgatgttgacagtccc 141  Q
    | |||| |||| ||| |||||    
T  1731666 agcctcaatgtggacggtccc 1731646  T

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Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 20825873 - 20826020
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||| |||||| |||||||||||  | |||||||| |||||| ||||||||| |||| |||||| ||| |||||||| |||    
T  20825873 agtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggttttgggtaagagtgtggtgtttctcttccttatgcggttgttct 20825972  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||| ||||| |||||||||||| |||||| ||| | | ||||||||    
T  20825973 agccttgatgtggacagtcccccatgctcccttcaatgatccaacagt 20826020  T

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Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 39792979 - 39792860
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||||||||| ||||||| || ||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| ||||| |||    
T  39792979 agtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggttgttct 39792880  T
Q  121 aacctcgatgttgacagtcc 140  Q
    | ||||||||| ||| ||||    
T  39792879 agcctcgatgtggacggtcc 39792860  T

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Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 43827480 - 43827598
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||| |||||| |||||||| ||||||||||||||||  |||||||||||| ||| |||||||||||| ||||||||||| |||||||||||| ||||||    
T  43827480 aaagattgaactccttataaataagaggacccataaattcattgccttaaggttt-ggataagagtgtggtgtctctcttacttgtgcggttgttctaac 43827578  T
Q  124 ctcgatgttgacagtccccc 143  Q
    |||||||| ||| |||||||    
T  43827579 ctcgatgtggacggtccccc 43827598  T

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Target: chr4; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 49076951 - 49076829
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||||| | ||||||| |||||| ||||||||||||||||| |    
T  49076951 atagtaaaggttgaacaccttata-gtaagagaacccataaacccataaccttaaggttttgggttagagtgtggtgtctttcttgcttgtgcggttgtt 49076853  T
Q  119 ctaacctcgatgttgacagtcccc 142  Q
    ||| ||||||||| ||| ||||||    
T  49076852 ctagcctcgatgtggactgtcccc 49076829  T

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Target: chr4; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 39404435 - 39404545
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||  |||| ||| |||||||||||||||||| ||||| |||    
T  39404435 agtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctctcttgcttgtgtggttgttct 39404534  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  39404535 agcctcgatgt 39404545  T

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Target: chr4; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 36608780 - 36608647
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| ||||||||||| ||||||||||||| ||||||| |||||| |||||| |||||| ||||||||| ||||||||||  || ||| ||||| |||    
T  36608780 agtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctctcactagtgtggttgttct 36608681  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | ||||||||| ||| |||||||| |||||||||    
T  36608680 agcctcgatgtggacggtcccccaagctcccctc 36608647  T

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Target: chr4; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 49880195 - 49880280
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| || ||||||||||||    
T  49880195 atagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagcgtggtgtctctcttg 49880280  T

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Target: chr4; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 18932870 - 18932758
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||| |||| | ||||| |    
T  18932870 atagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctcttacttgagtggttgtt 18932771  T
Q  119 ctaacctcgatgt 131  Q
     || |||||||||    
T  18932770 atagcctcgatgt 18932758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 45496843 - 45496931
Alignment:
Q  22 gtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtg 110  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||| ||||||||| ||||||||||||||||||    
T  45496843 gtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgcttgtg 45496931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 36572056 - 36572166
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||||||||||| |||||| | ||||| | |||||||||| ||||||||||||| ||     
T  36572056 agtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggttagagtatggtgtctctctcgcttgtgcggttgttca 36572155  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  36572156 agcctcgatgt 36572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 50459758 - 50459868
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| |||| | |||||| || |||||||||||||||||| ||||| |||    
T  50459758 agtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttgcttgtgtggttgttct 50459857  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  50459858 agcctcgatgt 50459868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 49302941 - 49303053
Alignment:
Q  21 agtaaaggttgaacaccttataa--gtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||| ||| |||| ||| |    
T  49302941 agtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtatctcttacttatgcgattgtt 49303040  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  49303041 ctatcctcgatgt 49303053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 54108571 - 54108684
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccat-aaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgc 117  Q
    ||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||| |||||| ||||||||| |||||| ||||||||||| |||||     
T  54108571 atagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgtctatcttgcttgtgtggttgt 54108670  T
Q  118 tctaacctcgatgt 131  Q
    |||| |||| ||||    
T  54108671 tctagcctcaatgt 54108684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 23817783 - 23817677
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacag 137  Q
    |||||||||||||||  ||||||| |||||||||||| |||||| ||||||||| |||||||||||||| ||| ||||| |||| ||||||||| ||| |    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacgg 23817684  T
Q  138 tccccca 144  Q
    |||||||    
T  23817683 tccccca 23817677  T

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Target: chr4; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 54343122 - 54343017
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||| |||||| ||||||||| |||||||||||||||| | ||||| |    
T  54343122 atagtaaaggttgaacaccttataagtaagaggaccc-------cattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgagtggttgtt 54343030  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  54343029 ctagcctcgatgt 54343017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 54741297 - 54741216
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| |||||| ||||||||||||||||||| |||||||    
T  54741297 agtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttggataagagtgtagtctctctct 54741216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 16889655 - 16889535
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||| ||||||||||||||||||  |||||||| | ||||||||  |||||| ||||||| | ||||||||||| |||||| | ||| |||    
T  16889655 agtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctctcttccttgtgtgattgttct 16889556  T
Q  121 aacctcgatgttgacagtccc 141  Q
    ||||||||||| ||| |||||    
T  16889555 aacctcgatgtggacggtccc 16889535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 20826252 - 20826364
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||| ||||| | |||||||||  |||||||||| ||| |||| ||| |    
T  20826252 atagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctctcttccttatgcgattgtt 20826351  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  20826352 ctagcctcgatgt 20826364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 34004701 - 34004594
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||   ||||||||  |||||||||||| ||||     
T  34004701 taaaggttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgataagagtgtgccgtctctctcccttgtgcggttgttctag 34004603  T
Q  123 cctcgatgt 131  Q
    |||||||||    
T  34004602 cctcgatgt 34004594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 52884922 - 52885006
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt-ggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||| ||| ||||||||||    
T  52884922 atagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtgtctctct 52885006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 4390220 - 4390090
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||| || | | | |||||| ||||| |||||| |||||||||   ||||||||||||||||| |||| |||    
T  4390220 agtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttct 4390121  T
Q  121 aacctcgatgttgacagtcccccaggctccc 151  Q
    | ||||||||  ||| ||| |||| ||||||    
T  4390120 agcctcgatgcggacggtctcccaagctccc 4390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 34646768 - 34646687
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||| |||||||||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||||||| ||||||||||    
T  34646768 agtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 34646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 2741106 - 2741178
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  2741106 atagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggtaagagtgt 2741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 6975577 - 6975489
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgctt 107  Q
    ||||||||||||||| | ||||||||||||||||| |||||| |||||  ||||||||||||| ||||||||| | |||||||||||||    
T  6975577 atagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaagattttgggtaagagtgtggcgtctctcttgctt 6975489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 16888935 - 16888804
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||| |||||||||||||||| ||| |||||| ||||| |||| | |||||| |||||||||  ||||||||||| ||||||| ||| |||    
T  16888935 agtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggtaagagtgtgatgtctctcttgtttgtgcgattgttct 16888836  T
Q  121 aacctcgatgttgacagtcccccaggctcccc 152  Q
    |   ||||||| ||| |||||| | |||||||    
T  16888835 agtttcgatgtagacggtcccctaagctcccc 16888804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 31691203 - 31691301
Alignment:
Q  35 accttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtc--tctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| | |||  |||||||||||| || ||| |||| |||||||||    
T  31691203 accttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctcttgcttgtacgattgttctagcctcgatgt 31691301  T

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Target: chr4; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 2740737 - 2740869
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||   ||||||||| | ||||||||  |||||  ||||| |||    
T  2740737 agtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgtaagagtgtggcgtctctctcacttgt--ggttgttct 2740834  T
Q  121 aacctcgatgttgacagtcccccaggctcccctca 155  Q
    | ||||||| | ||  |||||||  ||||||||||    
T  2740835 agcctcgatatggatggtcccccgagctcccctca 2740869  T

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Target: chr4; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 54017821 - 54017751
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||| | |||||||||    
T  54017821 agtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtgt 54017751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 3244570 - 3244449
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||  |||||| ||||| |||   ||||||||  |||||  ||||| ||     
T  3244570 agtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctctctcacttgtatggttgttcc 3244471  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    | ||||||||| | ||||||||    
T  3244470 agcctcgatgtgggcagtcccc 3244449  T

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Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 3341165 - 3341298
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| ||||| ||||||||||||||||||||||   |||||  |||||||||||| |||||||||  ||||| ||||  || || ||||  | |    
T  3341165 agtaaaggttaaacactttataagtaagaggacccataacatcattgttttaagattttgggtaagagtgtgatgtctttcttaattatgtggttatttt 3341264  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    ||||||||||| ||| ||||||||  ||||||||    
T  3341265 aacctcgatgtagacggtcccccaaactcccctc 3341298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 41707583 - 41707503
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||||| ||||||||| || |||||||||| ||||| |||||| |||||| ||||||||| ||||||||||    
T  41707583 agtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggttttgg-taagagtgtggtgtctctct 41707503  T

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Target: chr4; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 40067088 - 40067184
Alignment:
Q  28 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacc 124  Q
    ||||||||| |||||||||||||||| |||| | ||| | |||||||||||||| ||| |||||  |||||||||||||| || ||||| |||||||    
T  40067088 gttgaacacattataagtaagaggacacatagatccactaccttaagattttgggtaaaagtgtgatgtctctcttgcttatgtggttgttctaacc 40067184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 49076567 - 49076515
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49076567 agtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaa 49076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 760230 - 760324
Alignment:
Q  25 aaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||  || |||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||   ||||| |||||||||    
T  760230 aaggttgagaactttataagtgagaggacccataaactcattgccttaagattttgg-taaaagtgtggtgtctctctcatttgtgtggttgctct 760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 15841482 - 15841387
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctcta 121  Q
    ||||||||||| || ||||| ||||||  ||||||| |||||||||||| |||||| |||||||||  |||||||||  |||||| ||||||||||    
T  15841482 aggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtctctctcacttgtgtggttgctcta 15841387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 43174544 - 43174627
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||  ||||||  | |||| ||||||||| | ||||||||||    
T  43174544 agtaaaggttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggtaagagtgtggcgtctctcttg 43174627  T

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Target: chr4; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 51768179 - 51768056
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||| ||||||||| ||||||| ||||| |||||| |||||| ||| |||    |||||||||| ||| || | ||| |||    
T  51768179 agtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggttttgggtaaaagtacgatgtctctcttacttatgggattgttct 51768080  T
Q  121 aacctcgatgttgacagtccccca 144  Q
    ||||||||||| ||| ||| ||||    
T  51768079 aacctcgatgtggacggtctccca 51768056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 3271841 - 3271948
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctc---ttgcttgtgcggttgctctaacctcgatgttga 134  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||| |||||||||   ||  || || ||||| |||| ||||||||| ||    
T  3271841 ttataagtaagagaacccataaacctattgccttaaggttttgggtaagagtgt-gtgtctctctcgtttattatgtggttgttctagcctcgatgtgga 3271939  T
Q  135 cagtccccc 143  Q
    |||||||||    
T  3271940 cagtccccc 3271948  T

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Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 18879852 - 18879962
Alignment:
Q  30 tgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgat 129  Q
    |||||||||||||||||||| |||| ||||||| ||| ||||||| |||||| |||||||||   |||||| ||| ||||| ||||| |||| | |||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtgacgtctcttttggttgtgtggttgttctagcttcgat 18879951  T
Q  130 gttgacagtcc 140  Q
    || ||| ||||    
T  18879952 gtggacggtcc 18879962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 10246384 - 10246436
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 73  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  10246384 agtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 10246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 19504758 - 19504842
Alignment:
Q  46 aagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatg 130  Q
    ||||||||||||||| | ||||||||||  |||||| ||||||||| | |||| ||||||||||| ||||| |||| ||||||||    
T  19504758 aagaggacccataaatctattgccttaaagttttgggtaagagtgtggcgtctatcttgcttgtgtggttgttctagcctcgatg 19504842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 23556980 - 23556886
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||  |||||| |||||| | |||||||  |||||||||||  ||||||||||||||||   ||||||||| |||||| |||||||||    
T  23556980 aggttgaacattttataaataagagaatccataaaatcattgccttaaagttttggataagagtgtgacgtctctcttacttgtgtggttgctct 23556886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 28034271 - 28034365
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||||| |||| ||||||||||  ||||| ||||| |||| | ||||||||| | ||||||||  ||| ||||||||||||    
T  28034271 aggttgaacactttataagtgagagaacccataaacttattgctttaaggttttaggtaagagtgtggcgtctctctcacttatgcggttgctct 28034365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 34544148 - 34544242
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaa-gattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||| ||| |||||| | ||||||||||||||| ||||||||||| | |||||| ||||||||| || |||||||  ||||| |||||||||    
T  34544148 aggttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggtaagagtgtggtatctctctcacttgtacggttgctc 34544242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 48111817 - 48111736
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||| |||||||||| |||||  ||||| ||||| ||||||| |||| | || |||||| ||||||||||    
T  48111817 agtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgtctctct 48111736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 10396483 - 10396534
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||| | |||||||||||||||| || |||||||    
T  10396483 gacccataaacccattgccttagggttttggataagagtgtggtctctctct 10396534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 11197293 - 11197344
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  11197293 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctct 11197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 39699065 - 39698944
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgcctt--aagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||  || |||||||||||| ||||||| || |  | ||  ||| |||||  |||||||||||  ||||||||||||||||||||  |    
T  39699065 agtaaaggttgaacatattctaagtaagaggatccataaatccgtgtcgttttaaggttttgagtaagagtgtagcatctctcttgcttgtgcggttatt 39698966  T
Q  119 ctaacctcgatgttgacagtcc 140  Q
    |||  |||||||| ||||||||    
T  39698965 ctagtctcgatgtggacagtcc 39698944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 45489450 - 45489341
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||| |||||||||||| || | |||||| | ||  |||||||||| | |||||||||  ||||||| ||||| ||| | ||| |||    
T  45489450 agtaaaggttgaacaccatataagtaagagaactcttaaacctactg-tttaagatttttggtaagagtgtgatgtctcttttgctagtgtgattgttct 45489352  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  45489351 agcctcgatgt 45489341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 11702341 - 11702284
Alignment:
Q  98 tctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctca 155  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||||  ||||||||||    
T  11702341 tctcttgcttgtgcggttgttctagcctcgatgtgaacagtccccctcgctcccctca 11702284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 922485 - 922537
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctctt 103  Q
    ||||||||||||||||| |||| |  ||||||||||||||| |||||||||||    
T  922485 gacccataaacccattgtcttaggggtttggataagagtgtggtgtctctctt 922537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 15841086 - 15841023
Alignment:
Q  38 ttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||| |||||| | ||||||||||||| ||||| |||||| |||||||||| |||||||||    
T  15841086 ttataagtgagaggatctataaacccattgctttaag-ttttgggtaagagtgtattgtctctct 15841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 50
Target Start/End: Original strand, 44620331 - 44620362
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagag 50  Q
    ||||||||||||||||||||||||||||||||    
T  44620331 atagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 50788077 - 50788011
Alignment:
Q  57 taaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||| ||||||||||||| |||| ||||||||||| |||||||| | |||| |  ||||||||||||    
T  50788077 taaatccattgccttaaggttttagataagagtgtggtgtctctgtcgcttatttggttgctctaac 50788011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 51681604 - 51681650
Alignment:
Q  50 ggacccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    |||| |||| |||||||||||||||||||||| ||||||||| ||||    
T  51681604 ggactcatatacccattgccttaagattttgggtaagagtgtggtgt 51681650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 19895406 - 19895443
Alignment:
Q  94 tgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  19895406 tgtctctcttgcttgtgcggttgttctagcctcgatgt 19895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 44620983 - 44621011
Alignment:
Q  22 gtaaaggttgaacaccttataagtaagag 50  Q
    |||||||||||||||||||||||||||||    
T  44620983 gtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 22304604 - 22304728
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  22304604 atagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 22304703  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    |||  |||||||| |||||||||||    
T  22304704 ctagtctcgatgtggacagtccccc 22304728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 12114683 - 12114550
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||| |||||||||||| |||    
T  12114683 agtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcggttgttct 12114584  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | || |||||| | | ||||||||| ||||||||    
T  12114583 agccacgatgtggtcggtcccccagactcccctc 12114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 15772891 - 15773010
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||| |||    
T  15772891 agtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctctcttgcttgtgtggttgttct 15772990  T
Q  121 aacctcgatgttgacagtcc 140  Q
    ||||||||||| ||| ||||    
T  15772991 aacctcgatgtggacggtcc 15773010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 42342509 - 42342362
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||| |||||||||   |||||||||||||||||||||| |||    
T  42342509 agtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttct 42342410  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | |||| |||| ||| ||||||| ||||||||| ||| ||||||||||    
T  42342409 agcctcaatgtggacggtccccctggctccccttagtgacccaacagt 42342362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 29645023 - 29644890
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| | ||||||||||||| |||||||| | |    
T  29645023 agtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgtttt 29644924  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | ||||||||| ||| |||||||| |||||||||    
T  29644923 agcctcgatgtggacggtcccccaagctcccctc 29644890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 37991100 - 37990967
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||| ||||||||| ||||||||||||||| || ||||| |    
T  37991100 atagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtggttgtt 37991001  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccc 152  Q
    ||| ||||||||| ||| ||||| ||||||||||    
T  37991000 ctagcctcgatgtggacggtccctcaggctcccc 37990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 43346914 - 43346793
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| |    
T  43346914 atagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgtt 43346815  T
Q  119 ctaacctcgatgttgacagtcc 140  Q
    ||| |||| |||| ||| ||||    
T  43346814 ctagcctctatgtggacggtcc 43346793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 35946559 - 35946682
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||| |||||||||||||||||||  ||| |||    
T  35946559 agtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgcaattgttct 35946658  T
Q  121 aacctcgatgttgacagtccccca 144  Q
    | ||||||||| ||| ||||||||    
T  35946659 agcctcgatgtggacggtccccca 35946682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 37990762 - 37990615
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| | ||| |    
T  37990762 atagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtgattgtt 37990663  T
Q  119 ctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    ||| ||||||||| ||| |||||||  |||| ||||| | ||||||||    
T  37990662 ctagcctcgatgtggacggtcccccgagctctcctcaatgacccaaca 37990615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 32589742 - 32589862
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||   ||||||||||||||||| ||||| ||||     
T  32589742 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcttgcttgtgtggttgttctag 32589841  T
Q  123 cctcgatgttgacagtccccc 143  Q
     |||||||| ||| |||||||    
T  32589842 gctcgatgtggacggtccccc 32589862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 41359888 - 41359776
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||||||| ||||||| ||||| |    
T  41359888 atagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctcgcttgtgtggttgtt 41359789  T
Q  119 ctaacctcgatgt 131  Q
    ||| |||||||||    
T  41359788 ctagcctcgatgt 41359776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 32463018 - 32462911
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||| |||| |    
T  32463018 aaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttgttctagc 32462919  T
Q  124 ctcgatgt 131  Q
    ||||||||    
T  32462918 ctcgatgt 32462911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 52634713 - 52634858
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||   ||||||||||||||||| |||| |||    
T  52634713 agtaaaggttgaacgccttataagtaagag-acccataaacccattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcagttgttct 52634811  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||| ||||| ||| |||||||  ||||||| |||| ||||||||||    
T  52634812 agccttgatgtagactgtcccccgagctcccc-cagtgacccaacagt 52634858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 54017937 - 54017791
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||| |||||||| |  |||||||| |||||| ||||||||| ||||||||||| |||||| ||||| |||    
T  54017937 agtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgtggttgttct 54017838  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | | ||||||| | | ||||||| |||||||| |||| ||||||||||    
T  54017837 agcttcgatgtgggcggtccccctggctcccc-cagtgacccaacagt 54017791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 39935076 - 39934966
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||  |||||||||  ||||||||||||||||| ||||| |||    
T  39935076 agtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctctcttgcttgtgtggttgttct 39934977  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  39934976 agcctcgatgt 39934966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 29644702 - 29644569
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||||| | ||||||||||||| |||||||| | |    
T  29644702 agtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgcttatgcggttgtttt 29644603  T
Q  121 aacctcgatgttgacagtcccccaggctcccctc 154  Q
    | | ||||||| ||  ||||||||  ||||||||    
T  29644602 agcttcgatgtggatggtcccccaaactcccctc 29644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 39914289 - 39914410
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||| |||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||  ||| |||||||| |||    
T  39914289 agtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggataagagtgtggtgtctctctcacttatgcggttgttct 39914388  T
Q  121 aacctcgatgttgacagtcccc 142  Q
    | ||||||||| ||||| ||||    
T  39914389 agcctcgatgtagacagccccc 39914410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 22304060 - 22303944
Alignment:
Q  37 cttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgaca 136  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||| |||| ||||||||| ||      
T  22304060 cttataagtaagcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggatt 22303961  T
Q  137 gtccccc-aggctcccc 152  Q
    ||||||| |||||||||    
T  22303960 gtcccccaaggctcccc 22303944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 21832464 - 21832344
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| |||||| ||||||||  | |||||||||||||||  ||||| |||    
T  21832464 agtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggtaagagtg--gcgtctctcttgcttgtctggttgttct 21832367  T
Q  121 aacctcgatgttgacagtccccc 143  Q
    | ||||||||| |||||||||||    
T  21832366 agcctcgatgtggacagtccccc 21832344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 54018319 - 54018209
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||| |||||||||||||||||||||||||||||||||| |  |||||||| |||||| ||||||||| ||||||||| |||||||| ||||| |||    
T  54018319 agtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgcttgtgtggttgttct 54018220  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  54018219 agcctcgatgt 54018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 33803375 - 33803250
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | |||| ||||||||| | ||||| ||  |||||| ||||| |    
T  33803375 atagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgtctccctctcttgtgtggttgtt 33803276  T
Q  119 ctaacctcgatgttgacagtccccca 144  Q
    ||| ||||||||| ||| ||||||||    
T  33803275 ctagcctcgatgtggacggtccccca 33803250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 42342196 - 42342092
Alignment:
Q  36 ccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgac 135  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||| | |||||||||||||||||||||| |||| ||||||||| |||    
T  42342196 ccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggac 42342097  T
Q  136 agtcc 140  Q
     ||||    
T  42342096 ggtcc 42342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 45395774 - 45395664
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||| |||||  |||||| ||||||||| ||||||||||  |||||| |||||||||    
T  45395774 agtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctctcacttgtggggttgctct 45395675  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  45395674 agcctcgatgt 45395664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 3135196 - 3135099
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttg 116  Q
    |||||||| |||||||||||||||||||| || ||||||||||||| |||| |||| |||||  ||||||||| ||||||||||||||||||||||||    
T  3135196 atagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgtctctcttgcttgtgcggttg 3135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 39389105 - 39389197
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgc 111  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||| |||||    
T  39389105 atagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgcctgtgc 39389197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 3135555 - 3135453
Alignment:
Q  43 agtaagaggaccc--ataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcc 140  Q
    |||||||||||||  ||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||| ||| ||||    
T  3135555 agtaagaggacccccataaacccattgccttaaggttttagataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcc 3135456  T
Q  141 ccc 143  Q
    |||    
T  3135455 ccc 3135453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 25739548 - 25739413
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||| |||||||| | ||||||||||||||||||||||| |||||| || || |||||| |||||||||   |||||||| ||||||||||| | |    
T  25739548 atagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgtctctctagcttgtgcggtagtt 25739449  T
Q  119 ctaacctcgatgttgacagtccccc-aggctcccct 153  Q
    ||| ||||||||| ||| ||||||| ||||||||||    
T  25739448 ctagcctcgatgtggacggtcccccaaggctcccct 25739413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 4823690 - 4823784
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcgg 113  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||| | |||||| |||||    
T  4823690 atagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaagattttgggtaagagtgtggtgtcttttttgcttatgcgg 4823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 22303759 - 22303670
Alignment:
Q  42 aagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgt 131  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||||| |||||||| ||| |||| |||||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgt 22303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 33362412 - 33362327
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttg 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||  || |||||||||||||    
T  33362412 taaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaagtgtggcgtctctctcttgcttg 33362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 53118095 - 53118015
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||| ||||||||||||||||||||    
T  53118095 agtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggtaagagtgtagtgtctctct 53118015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 9240186 - 9240301
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||   | ||||||||  |||    
T  9240186 agtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcggataagaatgtggtgtctctctcaatagtgcggttattct 9240285  T
Q  121 aacctcgatgttgaca 136  Q
    | ||||||||| ||||    
T  9240286 agcctcgatgtggaca 9240301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 32462676 - 32462569
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||||||||||||||||||||||||| || ||||||||| ||||| ||||| |||||||||||||||| | |||||||||| ||||| | ||| | || |    
T  32462676 aaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggataagagtgtggggtctctcttgtttgtgggattgttttagc 32462577  T
Q  124 ctcgatgt 131  Q
    ||||||||    
T  32462576 ctcgatgt 32462569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 25755431 - 25755541
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||| | |||  || ||| ||| ||||| | |||||||||||||||||||||| |||    
T  25755431 agtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagtgtggcgtctctcttgcttgtgcggttgttct 25755530  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  25755531 agcctcgatgt 25755541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 45901754 - 45901872
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||  |||| | ||||||||| ||||||||||| ||| |  ||||| ||||||    
T  45901754 aaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggtaagagtgtggtgtctctcttacttatagggttgttctaac 45901853  T
Q  124 ctcgatgttgacagtcccc 142  Q
     ||||||| ||| ||||||    
T  45901854 ttcgatgtggacggtcccc 45901872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 15773229 - 15773341
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctct--cttgcttgtgcggttgct 118  Q
    |||||| |||||||| ||||||||||||||||| ||||| | |||||||||||  |||||| |||||||||  |||||||  |||||||||| ||||| |    
T  15773229 agtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgtctcttgcttgcttgtgtggttgtt 15773328  T
Q  119 ctaacctcgatgt 131  Q
    |||||||||||||    
T  15773329 ctaacctcgatgt 15773341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 49336808 - 49336697
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctc-ttgcttgtgcggttgctc 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |||||  || ||| ||||||||| ||||||||| ||  ||||||||||| ||    
T  49336808 agtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagtgtggtgtctctctttttttgtgcggttgttc 49336709  T
Q  120 taacctcgatgt 131  Q
    || |||| ||||    
T  49336708 tatcctcaatgt 49336697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 1634432 - 1634291
Alignment:
Q  24 aaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaac 123  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||| ||||||||  || |||||||  | | |  ||||| |||| |    
T  1634432 aaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgggtaagagtgcggtatctctctcac-tatatggttgttctagc 1634334  T
Q  124 ctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    |||||||| ||| |||||||  |||||||||||| || |||||    
T  1634333 ctcgatgtggacggtccccctagctcccctcagtgacacaaca 1634291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 44160663 - 44160545
Alignment:
Q  23 taaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaa 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||| |||||| ||||| ||| | ||||||||| ||  |||| ||| ||||     
T  44160663 taaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggttttgg-taagaatgtggcgtctctcttact--tgcgattgttctag 44160567  T
Q  123 cctcgatgttgacagtccccca 144  Q
    ||||||||| ||| ||||||||    
T  44160566 cctcgatgtggacggtccccca 44160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 31190054 - 31190154
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||||||||||||| ||||||||||||        |||||||| |||||| ||||||||| |||||||||||||||||  ||||| |||    
T  31190054 agtaaaggttgaacaccttataagttagaggacccata--------gccttaaggttttgggtaagagtgtggtgtctctcttgcttgtcgggttgttct 31190145  T
Q  121 aacctcgat 129  Q
    | |||||||    
T  31190146 agcctcgat 31190154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 42584943 - 42584864
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctct 100  Q
    ||||||| |||||||||||||||||||||||| ||||||||| |||| ||||||||||||   |||||||| ||||||||    
T  42584943 agtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtggtgtctct 42584864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 47964634 - 47964541
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    ||||||||| |  ||||||| |||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||  |||||| ||||||||    
T  47964634 aggttgaacgctatataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgctc 47964541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 52634990 - 52635047
Alignment:
Q  34 caccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  52634990 caccttataaataagaggacccataaactcattgccttaagattttgggtaagagtgt 52635047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 41359575 - 41359479
Alignment:
Q  58 aaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtcccccaggctcccctc 154  Q
    ||||||||  ||||||| |||||| ||||||||| | |||||| ||||||||||||||| |||| |||| |||| ||| ||||||||| ||||||||    
T  41359575 aaacccataaccttaaggttttgggtaagagtgtggcgtctcttttgcttgtgcggttgttctagcctcaatgtggacggtcccccagactcccctc 41359479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 33175785 - 33175635
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggaccc---ataaacccattgccttaagattttggataagagtgtagt---gtctctcttgcttgtgcggt 114  Q
    |||||||||||||||||||||||||||||| ||||   |||||| ||| |||||||| |||||| ||||||||| ||   ||||||||  |||||| | |    
T  33175785 agtaaaggttgaacaccttataagtaagagaacccataataaactcatagccttaaggttttgggtaagagtgt-gtgacgtctctctcacttgtgtgat 33175687  T
Q  115 tgctctaacctcgatgttgacagtcccccaggctcccctcagtaacccaaca 166  Q
    || |||| ||||| ||| | |||||||||  ||||||||||||  |||||||    
T  33175686 tgttctagcctcggtgtgggcagtcccccgagctcccctcagtggcccaaca 33175635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 53577401 - 53577507
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||||||| |||| || |||| ||| ||||||||  ||||||||||| | |||| ||||||||| |||||||||||||  ||| ||||| |||    
T  53577401 agtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggtaagagtgtggtgtctctcttgcaagtgtggttgttct 53577500  T
Q  121 aacctcg 127  Q
    | |||||    
T  53577501 agcctcg 53577507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 8327941 - 8328022
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||||||| |||| | |||||||||||||| ||||||||||  | ||||||||| |||||| ||||||||| ||||||||||    
T  8327941 agtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctctct 8328022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 11661988 - 11662108
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gattttggataagagtgtagtgtctctcttgcttgtgcggttgctc 119  Q
    |||||||||||||||||||| |||| ||||| | |||||||| |||||||||| | |||||| ||||||||  ||||||||| |  ||||| ||||| ||    
T  11661988 agtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagagtgaggtgtctctc-tcattgtgtggttgttc 11662086  T
Q  120 taacctcgatgttgacagtccc 141  Q
    || |||||||||  ||||||||    
T  11662087 tagcctcgatgtgaacagtccc 11662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 39336345 - 39336253
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||||| |||||| |||||||| |||||| ||||| |||||||||| |||||  || |||||| ||| ||| |||||||||    
T  39336345 aggttgaacactttataagtgagaggatccataaactcattgctttaaggttttggataatagtgt--tgcctctctcgctcgtgtggttgctct 39336253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 39336086 - 39335992
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    ||||||||||| |||||| | | | ||| ||||||  |||||||||||| |||||| ||||||||| |||||||||| ||||||| | |||||||    
T  39336086 aggttgaacactttataaatgataagactcataaaatcattgccttaaggttttgggtaagagtgtggtgtctctctcgcttgtgtgattgctct 39335992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 51886587 - 51886645
Alignment:
Q  10 tcgaagaatatagtaaaggttgaacaccttataagtaagaggacccataaacccattgc 68  Q
    ||||| || ||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  51886587 tcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaactcattgc 51886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 12749211 - 12749276
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||| ||||||||  ||||||||||||||| ||||| ||||| |||| |||||||||||    
T  12749211 aggttgaacactttataagtgtgaggacccataaaccaattgcattaaggtttttgataagagtgt 12749276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 46546441 - 46546376
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    ||||||||||| |||||||| |||| | ||||||||||||||||||||| |||||  |||||||||    
T  46546441 aggttgaacactttataagttagagaatccataaacccattgccttaaggttttgtgtaagagtgt 46546376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 50612575 - 50612446
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccata-----aacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcgg 113  Q
    ||||||||| ||||||||||||||||||||||||| ||||     |||  |||  |||||| |||||| |||||||||  ||||||||||||||| | ||    
T  50612575 atagtaaagattgaacaccttataagtaagaggactcataaatctaacatattatcttaaggttttgggtaagagtgtgatgtctctcttgcttgagtgg 50612476  T
Q  114 ttgctctaacctcgatgttgacagtccccc 143  Q
    ||| || | |||||| || ||| |||||||    
T  50612475 ttgttccatcctcgacgtggacggtccccc 50612446  T

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Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 22304302 - 22304378
Alignment:
Q  93 gtgtctctcttgcttgtgcggttgctctaacctcgatgttgacagtccccc-aggctcccctcagtaacccaacagt 168  Q
    |||||||||||||||||||||||| |||| ||||||||| ||| ||||||| ||  |||||||| | ||||||||||    
T  22304302 gtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcttcccctcactgacccaacagt 22304378  T

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Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 47965018 - 47964955
Alignment:
Q  39 tataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||| | ||||||||    
T  47965018 tataagtgagagggctcataagcccattgccttaagattttgggtaagagtgtggcgtctctct 47964955  T

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Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 53596542 - 53596593
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||||| ||||||||||| | ||||||||| ||||||||||    
T  53596542 gacccataaacccattgacttaagattttaggtaagagtgtggtgtctctct 53596593  T

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Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 54017636 - 54017590
Alignment:
Q  54 ccataaacccattgccttaagattttggataagagtgtagtgtctct 100  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  54017636 ccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 54017590  T

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Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 7767435 - 7767382
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 74  Q
    ||||||||||| |||| |||||| ||||||||| ||||||||||||| ||||||    
T  7767435 agtaaaggttggacactttataactaagaggactcataaacccattgtcttaag 7767382  T

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Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 16868471 - 16868434
Alignment:
Q  54 ccataaacccattgccttaagattttggataagagtgt 91  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16868471 ccataaactcattgccttaagattttggataagagtgt 16868434  T

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Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 25317200 - 25317292
Alignment:
Q  26 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||| ||| || ||| | |||||||||||||||   |||||||||| |||||| ||| |||||||||| |||||  |||||| |||||||    
T  25317200 aggttgagcactttgtaactgagaggacccataaacttgttgccttaaggttttgggtaaaagtgtagtgtgtctctcacttgtgtggttgct 25317292  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 48127906 - 48127859
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtct 98  Q
    |||||||||||||||||| ||||  |||||||||||||||| ||||||    
T  48127906 gacccataaacccattgctttaatgttttggataagagtgtggtgtct 48127859  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 53596027 - 53596078
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||| || ||||||| |||||| ||||||||| ||||||||||    
T  53596027 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctct 53596078  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 53596342 - 53596393
Alignment:
Q  51 gacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||| || ||||||| |||||| ||||||||| ||||||||||    
T  53596342 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgtctctct 53596393  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 3384387 - 3384317
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgt 91  Q
    |||| ||||| ||||| ||||||| ||||||||||||||||  | ||||||||  |||||| |||||||||    
T  3384387 agtataggttaaacactttataaggaagaggacccataaacttaatgccttaaagttttgggtaagagtgt 3384317  T

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Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 25413125 - 25413163
Alignment:
Q  64 attgccttaagattttggataagagtgtagtgtctctct 102  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  25413125 attgtcttaagattttggataagagtgtggtgtctctct 25413163  T

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Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 17732007 - 17731950
Alignment:
Q  39 tataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    |||||| ||| | ||||||||||||||||||||||| |||||  ||||||||| ||||    
T  17732007 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtgtggtgt 17731950  T

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Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 19033238 - 19033181
Alignment:
Q  39 tataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgt 96  Q
    |||||| ||| | ||||||||||||||||||||||| |||||  ||||||||| ||||    
T  19033238 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtgtggtgt 19033181  T

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Target: scaffold0078 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 5394 - 5477
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5394 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctcttg 5477  T

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Target: scaffold0078; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 5019 - 5129
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||| || | ||||||||||| | ||||||||||| |||||||||| | |||||| ||||||||| |||||||||| |||| ||||||||||||    
T  5019 agtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggttttgggtaagagtgtggtgtctctctcgcttatgcggttgctct 5118  T
Q  121 aacctcgatgt 131  Q
    | |||||||||    
T  5119 agcctcgatgt 5129  T

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Target: scaffold0702 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 635 - 489
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||| | ||||  |||    
T  635 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttgagtggtttttct 536  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacagt 168  Q
    | ||||||||| ||  |||||||  ||| ||| |||| ||||||||||    
T  535 agcctcgatgtggaaggtcccccgagcttccc-cagtgacccaacagt 489  T

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Target: scaffold0702; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 265 - 146
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||   ||| || ||| || ||||| ||| |||||||||||||||| | ||||| |    
T  265 atagtaaaggttgaacaccttataagtaagagga-ccataaa-ccat--actttaggtttagg-taagaatgtggtgtctctcttgcttgagtggttgtt 171  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||| ||||||||| ||| |||||||    
T  170 ctagcctcgatgtggacggtccccc 146  T

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Target: scaffold0027 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 47395 - 47519
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgct 118  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||||||||  |||||| ||| | ||| |||||||||||||||| ||||||| |    
T  47395 atagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggtaaaaatgtggtgtctctcttgcttgcgcggttgtt 47494  T
Q  119 ctaacctcgatgttgacagtccccc 143  Q
    ||||||||||||| ||| |||||||    
T  47495 ctaacctcgatgtggacggtccccc 47519  T

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Target: scaffold0391 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 1227 - 1082
Alignment:
Q  21 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctcttgcttgtgcggttgctct 120  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||| ||||||| | |||||||||||| || || ||||| |||    
T  1227 agtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagtatggtgtctctcttgtttatgtggttgttct 1128  T
Q  121 aacctcgatgttgacagtcccccaggctcccctcagtaacccaacag 167  Q
    | ||||||||| ||| || ||||| ||||||| |||| |||||||||    
T  1127 agcctcgatgtggacggttccccaagctcccc-cagtgacccaacag 1082  T

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Target: scaffold0391; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 1802 - 1731
Alignment:
Q  31 gaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtagtgtctctct 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctct 1731  T

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Target: scaffold0734 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 5431 - 5544
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctt-aagattttggataagagtgtagtgtctctcttgcttgtgcggttgc 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||| ||| ||| |||||| ||||||||| |||||||||||||||||| |||||     
T  5431 atagtaaaggttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttgggtaagagtgtggtgtctctcttgcttgtggggttgt 5530  T
Q  118 tctaacctcgatgt 131  Q
    || | |||||||||    
T  5531 tcaagcctcgatgt 5544  T

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Target: scaffold0734; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 5812 - 5929
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag-----attttggataagagtgtagtgtctctcttgcttgtgcgg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||| |||||||| || |||||| ||    
T  5812 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattaaattttgagtaagagtgtggtgtctcttttacttgtgggg 5911  T
Q  114 ttgctctaacctcgatgt 131  Q
    ||| || ||| |||||||    
T  5912 ttgttcaaacttcgatgt 5929  T

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Target: scaffold0171 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 17579 - 17519
Alignment:
Q  19 atagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagatttt 79  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  17579 atagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggtttt 17519  T

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Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 10231 - 10192
Alignment:
Q  22 gtaaaggttgaacaccttataagtaagaggacccataaac 61  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  10231 gtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 10446 - 10406
Alignment:
Q  22 gtaaaggttgaacaccttataagtaagaggacccataaacc 62  Q
    ||||||||||||||| ||||| ||||||||| |||||||||    
T  10446 gtaaaggttgaacactttatatgtaagaggatccataaacc 10406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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