View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20083_low_42 (Length: 243)

Name: NF20083_low_42
Description: NF20083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20083_low_42
NF20083_low_42
[»] chr3 (39 HSPs)
chr3 (16-243)||(2619869-2620094)
chr3 (150-241)||(4987239-4987330)
chr3 (151-243)||(8039784-8039876)
chr3 (180-243)||(16192728-16192791)
chr3 (150-240)||(28812536-28812626)
chr3 (148-227)||(13806270-13806349)
chr3 (150-241)||(40993294-40993374)
chr3 (149-238)||(41961597-41961686)
chr3 (150-241)||(34185071-34185162)
chr3 (155-241)||(14832119-14832205)
chr3 (175-241)||(16789032-16789098)
chr3 (153-241)||(14209133-14209221)
chr3 (149-241)||(49651734-49651825)
chr3 (200-241)||(15314874-15314915)
chr3 (161-241)||(25064929-25065007)
chr3 (200-241)||(25948885-25948926)
chr3 (150-198)||(10955004-10955052)
chr3 (150-198)||(11252028-11252076)
chr3 (153-241)||(15796245-15796333)
chr3 (150-190)||(20503525-20503565)
chr3 (150-241)||(27505266-27505351)
chr3 (153-241)||(29508464-29508547)
chr3 (150-198)||(55401127-55401175)
chr3 (202-241)||(7928470-7928509)
chr3 (200-243)||(11313798-11313841)
chr3 (150-241)||(17005567-17005658)
chr3 (150-196)||(3631738-3631784)
chr3 (155-241)||(11665964-11666050)
chr3 (202-243)||(6780419-6780460)
chr3 (202-243)||(8789550-8789591)
chr3 (154-243)||(9800058-9800147)
chr3 (149-238)||(14216915-14217004)
chr3 (149-238)||(14223044-14223133)
chr3 (202-243)||(25093520-25093561)
chr3 (162-243)||(26290389-26290470)
chr3 (202-243)||(35222956-35222997)
chr3 (153-197)||(7171554-7171598)
chr3 (153-189)||(15999972-16000008)
chr3 (154-198)||(18427001-18427045)
[»] chr4 (37 HSPs)
chr4 (153-243)||(30982829-30982919)
chr4 (149-241)||(22234837-22234929)
chr4 (153-243)||(24613652-24613742)
chr4 (150-238)||(19482691-19482779)
chr4 (151-243)||(36635342-36635429)
chr4 (153-243)||(30522867-30522956)
chr4 (149-241)||(19312355-19312447)
chr4 (150-198)||(23292945-23292993)
chr4 (153-243)||(5414123-5414213)
chr4 (151-241)||(47264006-47264096)
chr4 (181-238)||(15029788-15029844)
chr4 (203-243)||(18576038-18576078)
chr4 (150-190)||(29205528-29205568)
chr4 (150-189)||(715564-715603)
chr4 (150-189)||(752890-752929)
chr4 (200-243)||(7970537-7970580)
chr4 (200-243)||(15659758-15659801)
chr4 (153-243)||(903940-904030)
chr4 (150-196)||(28964207-28964253)
chr4 (185-243)||(40742609-40742667)
chr4 (158-240)||(46083947-46084029)
chr4 (154-235)||(5225565-5225646)
chr4 (149-198)||(8423676-8423725)
chr4 (153-241)||(11931300-11931388)
chr4 (149-198)||(35157943-35157992)
chr4 (158-243)||(37496722-37496807)
chr4 (149-198)||(40179594-40179643)
chr4 (210-243)||(40613468-40613501)
chr4 (194-243)||(46160914-46160963)
chr4 (150-198)||(4157488-4157536)
chr4 (181-241)||(4383387-4383447)
chr4 (202-242)||(4672085-4672125)
chr4 (203-243)||(5775359-5775399)
chr4 (150-198)||(21945555-21945603)
chr4 (211-243)||(22440609-22440641)
chr4 (154-198)||(34306767-34306811)
chr4 (150-198)||(49431078-49431126)
[»] chr1 (52 HSPs)
chr1 (150-241)||(9828064-9828155)
chr1 (150-241)||(47989517-47989608)
chr1 (150-241)||(5944303-5944394)
chr1 (180-243)||(44482248-44482311)
chr1 (150-241)||(1486663-1486748)
chr1 (161-241)||(9629859-9629939)
chr1 (154-241)||(6427484-6427571)
chr1 (162-243)||(25361904-25361983)
chr1 (149-238)||(18556403-18556492)
chr1 (175-243)||(34371731-34371799)
chr1 (160-243)||(27471524-27471607)
chr1 (154-241)||(31694662-31694749)
chr1 (153-243)||(25934634-25934724)
chr1 (150-208)||(40917802-40917860)
chr1 (154-198)||(1815309-1815353)
chr1 (153-241)||(6612122-6612210)
chr1 (153-241)||(32461415-32461502)
chr1 (150-198)||(40258892-40258940)
chr1 (200-243)||(6427368-6427411)
chr1 (151-198)||(43492454-43492501)
chr1 (202-240)||(13436479-13436517)
chr1 (202-243)||(30749858-30749899)
chr1 (202-243)||(30771309-30771350)
chr1 (150-198)||(5898225-5898273)
chr1 (150-198)||(22515846-22515894)
chr1 (183-243)||(36906015-36906075)
chr1 (204-243)||(1864882-1864921)
chr1 (200-243)||(7918209-7918252)
chr1 (200-243)||(20157348-20157391)
chr1 (150-197)||(33202956-33203003)
chr1 (151-241)||(16164264-16164354)
chr1 (151-241)||(30173711-30173801)
chr1 (150-243)||(38503338-38503429)
chr1 (205-243)||(42325578-42325616)
chr1 (210-243)||(10233271-10233304)
chr1 (204-241)||(13997903-13997940)
chr1 (176-241)||(17754331-17754396)
chr1 (150-195)||(18190067-18190112)
chr1 (210-243)||(25098563-25098596)
chr1 (202-243)||(40181889-40181930)
chr1 (203-243)||(2896122-2896162)
chr1 (175-243)||(12713300-12713368)
chr1 (175-243)||(12717391-12717459)
chr1 (210-242)||(17705594-17705626)
chr1 (154-243)||(17831485-17831572)
chr1 (211-243)||(19324580-19324612)
chr1 (183-243)||(21038101-21038161)
chr1 (203-243)||(36878479-36878519)
chr1 (150-198)||(37598883-37598931)
chr1 (150-198)||(38078620-38078668)
chr1 (150-198)||(40181923-40181971)
chr1 (154-198)||(52284765-52284809)
[»] chr7 (35 HSPs)
chr7 (150-241)||(24339662-24339753)
chr7 (150-243)||(32308138-32308231)
chr7 (150-241)||(26033409-26033500)
chr7 (149-198)||(598260-598309)
chr7 (174-243)||(26329354-26329423)
chr7 (151-241)||(43027424-43027508)
chr7 (155-241)||(7438726-7438812)
chr7 (155-241)||(15902842-15902928)
chr7 (149-198)||(21880204-21880253)
chr7 (150-241)||(5409790-5409875)
chr7 (150-241)||(2334270-2334360)
chr7 (200-243)||(17307911-17307954)
chr7 (154-241)||(21560523-21560610)
chr7 (200-243)||(22602708-22602751)
chr7 (151-241)||(9408283-9408373)
chr7 (153-198)||(8234198-8234243)
chr7 (153-198)||(33994264-33994309)
chr7 (192-243)||(8160434-8160485)
chr7 (148-243)||(19206068-19206163)
chr7 (150-241)||(27229259-27229350)
chr7 (200-243)||(35297670-35297713)
chr7 (203-240)||(640134-640171)
chr7 (154-243)||(6630864-6630953)
chr7 (202-243)||(8090025-8090066)
chr7 (202-243)||(9482952-9482993)
chr7 (168-241)||(11665406-11665479)
chr7 (154-195)||(15836447-15836488)
chr7 (210-243)||(17851449-17851482)
chr7 (202-243)||(18213033-18213074)
chr7 (202-243)||(20549809-20549850)
chr7 (210-243)||(22868060-22868093)
chr7 (202-243)||(32287463-32287504)
chr7 (202-243)||(39138462-39138503)
chr7 (203-243)||(5835265-5835305)
chr7 (193-241)||(18039019-18039067)
[»] chr5 (28 HSPs)
chr5 (150-241)||(7677725-7677816)
chr5 (153-241)||(21522770-21522858)
chr5 (153-241)||(21533336-21533424)
chr5 (153-243)||(21814279-21814369)
chr5 (153-235)||(21542056-21542138)
chr5 (150-241)||(39698561-39698652)
chr5 (150-243)||(19579719-19579812)
chr5 (153-243)||(6401516-6401606)
chr5 (150-243)||(3966521-3966614)
chr5 (150-190)||(15382545-15382585)
chr5 (200-243)||(6471887-6471930)
chr5 (150-243)||(30098344-30098437)
chr5 (149-238)||(30183572-30183661)
chr5 (184-241)||(37328826-37328883)
chr5 (200-243)||(41091255-41091298)
chr5 (200-241)||(13287397-13287438)
chr5 (202-243)||(28588674-28588715)
chr5 (153-198)||(30502350-30502395)
chr5 (202-243)||(30502388-30502429)
chr5 (153-198)||(30542693-30542738)
chr5 (202-243)||(30542731-30542772)
chr5 (210-243)||(39758290-39758323)
chr5 (149-198)||(43564933-43564982)
chr5 (185-233)||(6035510-6035558)
chr5 (150-198)||(21191015-21191063)
chr5 (150-190)||(21194082-21194122)
chr5 (211-243)||(24273039-24273071)
chr5 (211-243)||(24389143-24389175)
[»] chr6 (37 HSPs)
chr6 (151-241)||(16766717-16766807)
chr6 (153-243)||(18367854-18367944)
chr6 (154-243)||(10339077-10339167)
chr6 (153-243)||(16488541-16488631)
chr6 (150-241)||(5970056-5970147)
chr6 (150-241)||(8714000-8714091)
chr6 (150-238)||(8365467-8365555)
chr6 (150-240)||(7248379-7248469)
chr6 (174-243)||(26562707-26562776)
chr6 (151-243)||(5000575-5000667)
chr6 (153-241)||(9522911-9522999)
chr6 (150-241)||(9107318-9107409)
chr6 (185-243)||(9617452-9617510)
chr6 (150-243)||(17327609-17327696)
chr6 (184-243)||(4388103-4388162)
chr6 (200-243)||(9025492-9025535)
chr6 (199-241)||(7151432-7151474)
chr6 (202-243)||(7265593-7265634)
chr6 (150-243)||(9629401-9629494)
chr6 (202-243)||(32511666-32511707)
chr6 (153-198)||(32978861-32978906)
chr6 (179-243)||(8931579-8931643)
chr6 (150-198)||(28152150-28152198)
chr6 (153-241)||(31384940-31385027)
chr6 (202-241)||(7027262-7027301)
chr6 (184-243)||(20576615-20576674)
chr6 (149-243)||(32313422-32313517)
chr6 (192-243)||(34073337-34073388)
chr6 (202-243)||(7377997-7378038)
chr6 (210-243)||(11591878-11591911)
chr6 (210-243)||(19040370-19040403)
chr6 (149-198)||(28715347-28715396)
chr6 (150-198)||(4877995-4878042)
chr6 (203-243)||(13360373-13360413)
chr6 (201-241)||(17168914-17168954)
chr6 (150-198)||(34595186-34595234)
chr6 (169-241)||(34868753-34868825)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-241)||(241614-241706)
[»] chr8 (31 HSPs)
chr8 (154-238)||(29447467-29447551)
chr8 (150-243)||(11803277-11803370)
chr8 (149-241)||(15816076-15816168)
chr8 (158-243)||(26902131-26902216)
chr8 (150-241)||(22651996-22652087)
chr8 (151-241)||(11927035-11927125)
chr8 (151-241)||(11944685-11944775)
chr8 (153-243)||(29447061-29447151)
chr8 (150-241)||(29510252-29510343)
chr8 (151-241)||(8343336-8343426)
chr8 (154-243)||(12570461-12570549)
chr8 (154-243)||(12570687-12570775)
chr8 (153-198)||(31557048-31557093)
chr8 (168-239)||(24362167-24362239)
chr8 (150-198)||(44462154-44462202)
chr8 (150-198)||(44469687-44469735)
chr8 (162-241)||(2572016-2572095)
chr8 (202-243)||(4786338-4786379)
chr8 (176-240)||(28384967-28385032)
chr8 (150-190)||(22943308-22943348)
chr8 (155-198)||(5813644-5813687)
chr8 (150-217)||(24205767-24205834)
chr8 (202-240)||(8847277-8847315)
chr8 (155-241)||(21465432-21465518)
chr8 (163-237)||(28745522-28745596)
chr8 (202-243)||(13844596-13844637)
chr8 (210-243)||(34897103-34897136)
chr8 (150-242)||(2035758-2035848)
chr8 (203-243)||(14134717-14134757)
chr8 (150-198)||(14134751-14134799)
chr8 (201-241)||(36934690-36934730)
[»] scaffold0036 (1 HSPs)
scaffold0036 (150-243)||(9695-9788)
[»] scaffold0136 (1 HSPs)
scaffold0136 (150-241)||(3797-3888)
[»] scaffold0044 (1 HSPs)
scaffold0044 (161-243)||(53198-53280)
[»] scaffold0008 (1 HSPs)
scaffold0008 (150-243)||(263320-263413)
[»] chr2 (28 HSPs)
chr2 (158-243)||(34784938-34785023)
chr2 (154-243)||(35056886-35056975)
chr2 (150-241)||(37419763-37419854)
chr2 (150-243)||(44860338-44860431)
chr2 (150-198)||(2438678-2438726)
chr2 (150-198)||(18840972-18841020)
chr2 (158-243)||(36096331-36096416)
chr2 (153-241)||(30717481-30717569)
chr2 (150-233)||(4882644-4882727)
chr2 (154-241)||(11223816-11223902)
chr2 (150-241)||(15657884-15657975)
chr2 (153-240)||(36756295-36756382)
chr2 (200-241)||(18622626-18622667)
chr2 (202-243)||(20242727-20242768)
chr2 (183-243)||(18054784-18054844)
chr2 (156-243)||(18889544-18889632)
chr2 (153-243)||(2331812-2331900)
chr2 (150-213)||(26769559-26769622)
chr2 (163-238)||(27286253-27286328)
chr2 (149-240)||(28524447-28524538)
chr2 (150-197)||(38117118-38117165)
chr2 (202-240)||(5367213-5367251)
chr2 (153-198)||(5367244-5367289)
chr2 (210-243)||(21616780-21616813)
chr2 (186-243)||(24975309-24975366)
chr2 (158-243)||(32749781-32749866)
chr2 (203-243)||(38355888-38355928)
chr2 (150-218)||(42511341-42511408)
[»] scaffold0123 (1 HSPs)
scaffold0123 (163-243)||(44486-44566)
[»] scaffold0086 (1 HSPs)
scaffold0086 (150-241)||(2948-3039)
[»] scaffold0019 (1 HSPs)
scaffold0019 (150-241)||(71745-71836)
[»] scaffold0020 (2 HSPs)
scaffold0020 (161-243)||(137798-137880)
scaffold0020 (200-243)||(135310-135353)
[»] scaffold0623 (1 HSPs)
scaffold0623 (153-243)||(5947-6037)
[»] scaffold0171 (2 HSPs)
scaffold0171 (153-241)||(23531-23619)
scaffold0171 (200-241)||(23440-23481)
[»] scaffold0793 (1 HSPs)
scaffold0793 (150-189)||(4840-4879)
[»] scaffold0022 (1 HSPs)
scaffold0022 (200-243)||(99911-99954)
[»] scaffold0004 (1 HSPs)
scaffold0004 (150-197)||(92875-92922)
[»] scaffold0168 (1 HSPs)
scaffold0168 (185-243)||(21061-21119)
[»] scaffold1528 (1 HSPs)
scaffold1528 (176-241)||(1055-1120)
[»] scaffold0652 (1 HSPs)
scaffold0652 (150-198)||(421-469)
[»] scaffold0053 (1 HSPs)
scaffold0053 (154-198)||(8850-8894)
[»] scaffold0039 (1 HSPs)
scaffold0039 (151-243)||(84922-85014)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 2619869 - 2620094
Alignment:
Q  16 gttgtaaggtggatcaagccaaggcattgaaaaaggatgttacatttagaaatgctttcaatatatggattgttgtcttatgtagttgtaagcaaaaaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2619869 gttgtaaggtggatcaagccaaggcattgaaaaaggatgttacatttagaaatgctttcaatatatggattgttgtcttatgtagttgtaagcaaaaaca 2619968  T
Q  116 tttttcaacttagagtttgattgcatagagtgctctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacat 215  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||      
T  2619969 tttttcaacttagagtttgattgcatagagtgctttcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacac-- 2620066  T
Q  216 atagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||||||||||||||||    
T  2620067 atagttacacttaattatgtgattttct 2620094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 4987239 - 4987330
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||| ||||||||||  |||||| |||| ||||||||| | || ||||||||||||||||||||||    
T  4987239 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgatttt 4987330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 8039784 - 8039876
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||||||||| ||||||||| || |||| ||||||| ||||||||| ||||||||| |||||||||||||| | |||||||    
T  8039784 tcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttct 8039876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 16192728 - 16192791
Alignment:
Q  180 tgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||    
T  16192728 tgtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttct 16192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 28812626 - 28812536
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    |||||||||||||||||| | || ||||||||| ||||||||||||||  ||||||||| |||| | ||  ||||||||||||||||||||    
T  28812626 ctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgattt 28812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 13806349 - 13806270
Alignment:
Q  148 ctctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactg 227  Q
    ||||||||||||||||||||||| | ||| ||||||| |||||| |||||| ||||||||| ||||||||| ||| ||||    
T  13806349 ctctcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacacatataattatactg 13806270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 40993294 - 40993374
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||||||||||||||           ||||||| ||||||||| ||||||||||||||||||||||    
T  40993294 ctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----------cgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 41961597 - 41961686
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||||||| |||| | || |||||| |||| |||||||    
T  41961597 tctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgat 41961686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 34185071 - 34185162
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| ||||||  |||| |||| ||||  | ||||||||| |||| | || |||||||||||| |||||||||    
T  34185071 ctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgatttt 34185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 14832205 - 14832119
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||| |||||| |||||||||| || |||| ||||||||  |||| | || ||||| ||| ||||||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgatttt 14832119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16789098 - 16789032
Alignment:
Q  175 ggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| |||| ||||| | |||||||||||||| |||| |||||||||||||| |||||||    
T  16789098 ggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaattatatgatttt 16789032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 14209221 - 14209133
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||| || ||||| || || ||| |||||||||| ||||||| ||||||||  |||| | || ||||||||||||||||||||||    
T  14209221 ggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgatttt 14209133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 49651734 - 49651825
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||| ||||||||||| |||| |||||||||||| |   ||| ||||||||| |||| | || ||||| ||||||||||||||||    
T  49651734 tctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaattatgtgatttt 49651825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 15314874 - 15314915
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  15314874 cacgacaccaacacatataattacactaaattatgtgatttt 15314915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 25065007 - 25064929
Alignment:
Q  161 cgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||| | |||| |||||||||| ||||||  ||||| ||||||||  ||| ||||||| ||||||||||||||    
T  25065007 cgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgatttt 25064929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 25948885 - 25948926
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  25948885 cacgacaccaacacttataattacactgaattatgtgatttt 25948926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 10955052 - 10955004
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||| ||| |||||| |||||||||| |||||||    
T  10955052 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccg 10955004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 11252076 - 11252028
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  11252076 ctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccg 11252028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 15796245 - 15796333
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||| ||||||  ||||| |||| ||||| ||||||  ||||||||| |||  | || |||||||||||||| |||||||    
T  15796245 ggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgatttt 15796333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 20503565 - 20503525
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtc 190  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  20503565 ctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtc 20503525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 27505351 - 27505266
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||      ||||||||| |||| | || ||||||| ||||||||||||||    
T  27505351 ctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcaga------cacgacaccgacacttgtaattacacttaattatgtgatttt 27505266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 29508547 - 29508464
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||     | ||| | ||||||||| |||||||||||||| |||||||    
T  29508547 ggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacac-----caacatcgacacatataattacactgaattatatgatttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 55401175 - 55401127
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  55401175 ctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccg 55401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 7928509 - 7928470
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 11313798 - 11313841
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  11313798 cacgacactaacacatataattacactaaattatgtgattttct 11313841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 17005567 - 17005658
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||  |||||| |||| | |||| ||||  |||||||||||  ||| ||||| |||| |||| |||||||||||||| |||||||    
T  17005567 ctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattatatgatttt 17005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 3631784 - 3631738
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacac 196  Q
    |||||| ||||||||||| |||| ||||||||||||||||| |||||    
T  3631784 ctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 11666050 - 11665964
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| ||| |  | |||| ||||||||||| ||| |  ||||||||| ||||||||| ||||||| |||| |||||||||    
T  11666050 attaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 6780419 - 6780460
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||| |||||||||| || ||||||||||    
T  6780419 cgacaccaacacatataattacactgaactacgtgattttct 6780460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 8789550 - 8789591
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| |||||| |||||||||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 9800147 - 9800058
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||| |||| | |||| || || | ||||| |||| ||||||||| |||| || | |||||| ||||||||| |||||||    
T  9800147 gattaggcgtgtccaggtgtccgacacgtatcatctctgataccgacacgacaccgacacttacaattacacggaattatgtaattttct 9800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 14217004 - 14216915
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||||||||| ||||||| ||| || ||| |||||||||| |||||   ||||||||  |||| | || |||||||||||||| ||||    
T  14217004 tctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgat 14216915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 14223133 - 14223044
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||||||||| ||||||| ||| || ||| |||||||||| |||||   ||||||||  |||| | || |||||||||||||| ||||    
T  14223133 tctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgat 14223044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 25093561 - 25093520
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| |||||||||||| |||||||||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 26290470 - 26290389
Alignment:
Q  162 gtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| |||| |||||||||| ||| || |||||||  |||||||  ||||||||| ||| || ||| |||||||||||||    
T  26290470 gtgtcctggtgtcggacatgtgccgtttccgacaccggaacgacactgacacatataattaaaccgaactatgtgattttct 26290389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 35222997 - 35222956
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 7171598 - 7171554
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacacc 197  Q
    |||||||||||||| ||||| |||||| |||||||||| ||||||    
T  7171598 ggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 15999972 - 16000008
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgt 189  Q
    |||||||||||||||||||| |||||| |||||||||    
T  15999972 ggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 18427045 - 18427001
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||| |||||||||||||||||| ||||||| || |||||||    
T  18427045 gattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccg 18427001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 30982829 - 30982919
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| |||| |||| |||||||||| |||||||||||||    
T  30982829 ggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgattttct 30982919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 22234837 - 22234929
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||  |||||| |||| |||||| |||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||    
T  22234837 tctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 24613652 - 24613742
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||| |||| | |||| |||||||||||||||||| || |||||| |||| | || ||||| ||||||||||||||||||    
T  24613652 ggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttct 24613742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 19482779 - 19482691
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||  | |||| |||||||||||||| | || |||||| ||||||||||||    
T  19482779 ctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgat 19482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 36635429 - 36635342
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||||||||||| | |||  ||||||||||||||||   |||||     ||||||||| ||||||||||||||||||||||||    
T  36635429 tcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacga-----acacatataattacactgaattatgtgattttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 30522867 - 30522956
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| |||||| ||||| | || ||||||||||| |||| |||   |||| |||||| ||||||||||||||||||||||||||||||    
T  30522867 ggattagacgtgtctcggtgtcagatatgtgtcgtgtttgacgccgatccgac-ccaacatatatagttacactgaattatgtgattttct 30522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 19312447 - 19312355
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||| |||||| |||||| ||||| |||||| ||||||| || |||| || ||||||||| | || |||| ||||||||||| ||||||||||    
T  19312447 tctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 23292945 - 23292993
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  23292945 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccg 23292993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 5414123 - 5414213
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| ||| ||||||| ||| | |||| |||||||||| ||||| | ||||||||| | ||||||| |||||||| ||| |||||||||||    
T  5414123 ggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgattttct 5414213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 47264096 - 47264006
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||| |||| | |||||||||||| |||||||||  || |||| | |||  | || |||||| |||||||||||||||    
T  47264096 tcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaattatgtgatttt 47264006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 15029844 - 15029788
Alignment:
Q  181 gtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    ||||| |||||||| ||| | ||||||||||||||||| |||||||||||||||||||    
T  15029844 gtgtcatgtctgacgccgac-cgacaccaacacatataattacactgaattatgtgat 15029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 18576038 - 18576078
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttct 18576078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 29205568 - 29205528
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtc 190  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  29205568 ctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 715564 - 715603
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgt 189  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  715564 ctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 752890 - 752929
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgt 189  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  752890 ctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 7970580 - 7970537
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||    
T  7970580 cacgacaccaaaacatataattacactgaattatatgattttct 7970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 15659758 - 15659801
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||    
T  15659758 cacgacaccaacacatataattacaccgaattatgagattttct 15659801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 904030 - 903940
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||  ||||||| ||| ||||||  |||||||||  ||||||  |||| ||  | ||||||| ||||||||||||||||||||||||    
T  904030 ggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttct 903940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 28964207 - 28964253
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacac 196  Q
    ||||||||||||||||||| ||| |||| |||||||||||| |||||    
T  28964207 ctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacac 28964253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 40742667 - 40742609
Alignment:
Q  185 cgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||| ||||||| | ||||||||| |||||||  ||||| |||||||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttct 40742609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 46083947 - 46084029
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    ||||||||||| | | | |||| |||||||||| || || | ||||||||| ||||||||| |||||||  ||||||||||||    
T  46083947 aggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagattatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 5225565 - 5225646
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgt 235  Q
    ||||||||||||||||| | | || |||| ||||||| ||||||  ||||||||| ||||||||  || || ||||||||||    
T  5225565 gattaggcgtgtcccggggtccgatatgtatcgtgtccgacaccaacacgacaccgacacatattattgcattgaattatgt 5225646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 8423676 - 8423725
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||| ||||||||||||||||||| ||||||  ||||||||| |||||||    
T  8423676 tctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccg 8423725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 11931388 - 11931300
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcg-tgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||| |||||| |||| |||||||| |||| |||| || |||| || |||| | ||||||||| ||||||| ||||||||||||||    
T  11931388 ggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaattatgtgatttt 11931300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 35157943 - 35157992
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||| |||||| ||||||  |||||||||||||||| |||||||    
T  35157943 tctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccg 35157992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 37496807 - 37496722
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||| | ||||||||||||||| | || || ||| ||||| |||| | |  ||||| |||||||||| |||||||    
T  37496807 aggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcattttct 37496722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 40179594 - 40179643
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||  |||| || |||||||||||||| |||||||    
T  40179594 tctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccg 40179643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 40613501 - 40613468
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  40613501 acacatataattacactgaattatgtgattttct 40613468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 46160963 - 46160914
Alignment:
Q  194 caccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| ||||||||| ||||||||| | |||||||||||||| |||||||    
T  46160963 caccgacacgacaccgacacatataataacactgaattatgttattttct 46160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 4157536 - 4157488
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||| ||||||||| || ||||| ||||||||||||||||| |||||||    
T  4157536 ctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccg 4157488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 4383447 - 4383387
Alignment:
Q  181 gtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||| |||||||| ||||||||  |||  | || ||||||||||||||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttt 4383387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 4672085 - 4672125
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttc 242  Q
    ||||||| |||||||||| ||||||||||||||| ||||||    
T  4672085 cgacaccgacacatatagctacactgaattatgtaattttc 4672125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 5775359 - 5775399
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 21945603 - 21945555
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||  ||||| |||||||||||| |||| |||||||    
T  21945603 ctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccg 21945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 22440609 - 22440641
Alignment:
Q  211 cacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttct 22440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 34306767 - 34306811
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||| ||||| |||||| |||||||||| |||||||    
T  34306767 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccg 34306811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 49431126 - 49431078
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||| |||||||||||||||  ||||| |||||||||| |||||||    
T  49431126 ctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccg 49431078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 9828155 - 9828064
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||| | ||||||||||||||||||||||    
T  9828155 ctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 47989608 - 47989517
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||| || | ||||||||||||||| ||||||| ||||||||| |||| | || ||||||||||||||||||||||    
T  47989608 ctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttt 47989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 5944394 - 5944303
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||| |||||||| ||||||||||| ||||| | || || ||||||||| |||| |||| ||||||||||||||||||||||    
T  5944394 ctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 44482311 - 44482248
Alignment:
Q  180 tgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 1486663 - 1486748
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||| |||||||||      ||| ||||||||| |||| |||| ||||||||||||||||||||||    
T  1486663 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaattatgtgatttt 1486748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 9629859 - 9629939
Alignment:
Q  161 cgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||| ||||||||||||||||| |||| || ||||||||| |||| |||| | |||||||||||| |||||||    
T  9629859 cgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgatttt 9629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 6427571 - 6427484
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||  ||||||||  |||| | |||||||| ||||||||||||||||    
T  6427571 gattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgatttt 6427484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 25361983 - 25361904
Alignment:
Q  162 gtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| |||||| |||||||||  |||||| ||||||| ||||||||  ||||||||| ||||||||||||||||||||||||    
T  25361983 gtgttccggtgtcggacatgt--cgtgtccgacaccgacacgacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 18556403 - 18556492
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||||||||||||||||| ||| |||| | |||||| ||||||||||| ||||||||||| || | || ||||| | |||||||||||    
T  18556403 tctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgat 18556492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 34371799 - 34371731
Alignment:
Q  175 ggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| ||||||| || ||||||  ||||||||| ||||||||| ||||||||||||||||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 27471524 - 27471607
Alignment:
Q  160 gcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||| |||||| ||||||| ||  ||||||  | ||||||||||||| || ||||||||||||||||| ||||||    
T  27471524 gcgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttct 27471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 31694662 - 31694749
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||| |||||| || | |||||| ||||| ||||||| ||||||||| |||| | || ||| ||||||||||||||||||    
T  31694662 gattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgatttt 31694749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 25934724 - 25934634
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| |||||| |||| ||| | |||| |||||||||| ||||||| ||||| ||| ||||||||| |||||||| ||| |||||||||||    
T  25934724 ggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgattttct 25934634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 40917860 - 40917802
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacacc 208  Q
    ||||||||||||||||||||||| |||||| ||||||||||  |||||| |||||||||    
T  40917860 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacacc 40917802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 1815353 - 1815309
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  1815353 gattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccg 1815309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 6612122 - 6612210
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||| |||| ||||||  | ||||||| |||| || ||||||||| |||| | || |||||||||||||||| |||||    
T  6612122 ggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttt 6612210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 32461415 - 32461502
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||| ||| | |||| |||||||||| ||||||| ||| |||||||||| | || ||||| | ||||||||||||||    
T  32461415 ggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgatttt 32461502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 40258892 - 40258940
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  40258892 ctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccg 40258940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 6427411 - 6427368
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  6427411 cacgacaccaacacatataattacattgaattatgtgattttct 6427368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 43492454 - 43492501
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  43492454 tcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccg 43492501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 13436517 - 13436479
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattt 240  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 30749899 - 30749858
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  30749899 cgacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 30771350 - 30771309
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  30771350 cgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 5898225 - 5898273
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||| ||||||||||||  ||||| ||||||||||||||||||    
T  5898225 ctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccg 5898273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 22515846 - 22515894
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||| ||||| |||| |||||||||||| |||||||    
T  22515846 ctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccg 22515894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 36906075 - 36906015
Alignment:
Q  183 gtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||| | ||| || |||||||||||| |||| |||||||||||||||||||    
T  36906075 gtcgtgtccgacactgacacaacgccaacacatataattactctgaattatgtgattttct 36906015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 1864882 - 1864921
Alignment:
Q  204 acaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 7918209 - 7918252
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  7918209 cacgacactgacacatataattacactgaattatgtgattttct 7918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 20157348 - 20157391
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||    
T  20157348 cacgacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 33203003 - 33202956
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacacc 197  Q
    ||||||||||||||||| ||||| |||| |||| ||||||||||||||    
T  33203003 ctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 16164264 - 16164354
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||| |||| |||||| |||| | |||  |||||  |||||||   ||||||||| ||||| | ||||||||||||||    
T  16164264 tcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgatttt 16164354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 30173711 - 30173801
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||| ||||||||||||  | | ||||||||||||||||| || || | ||||||||| |||| | || ||||||||| |||||| |||||    
T  30173711 tcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttt 30173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 38503429 - 38503338
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||||||| | | | |||||||||| |||| |  |||| || |||||| ||||||||| |||||||||| ||| |||||||||    
T  38503429 ctcggattaggtgtgtccctgcgtcagacatgtgtcatgtccg--accgacaggacaccgacacatataattacactgaaatatatgattttct 38503338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 42325616 - 42325578
Alignment:
Q  205 caccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttct 42325578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 10233304 - 10233271
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  10233304 acacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 13997940 - 13997903
Alignment:
Q  204 acaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 17754396 - 17754331
Alignment:
Q  176 gacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||| ||| |||||  |||||| ||| ||||  |||||||||||||||||||||||||| |||||    
T  17754396 gacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaatttt 17754331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 18190067 - 18190112
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgaca 195  Q
    ||||||||||| ||||||||||| |||||| |||| ||||||||||    
T  18190067 ctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgaca 18190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 25098563 - 25098596
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttct 25098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 40181930 - 40181889
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  40181930 cgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 2896122 - 2896162
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||| |||||| |||||||||||||||||||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttct 2896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 12713300 - 12713368
Alignment:
Q  175 ggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| |||| ||||  ||||||| ||  ||||||| ||||||| ||||||| ||||||||||||||||    
T  12713300 ggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttct 12713368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 12717391 - 12717459
Alignment:
Q  175 ggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| |||| ||||  ||||||| ||  ||||||| ||||||| ||||||| ||||||||||||||||    
T  12717391 ggacacgtgttgtgtacgacaccgacataacaccaatacatataattacactaaattatgtgattttct 12717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 17705594 - 17705626
Alignment:
Q  210 acacatatagttacactgaattatgtgattttc 242  Q
    ||||||||| |||||||||||||||||||||||    
T  17705594 acacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 17831485 - 17831572
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtc-gtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||||||  |||| ||||| ||||| | |||||   | ||||||||  ||||||||||| ||||||||||||    
T  17831485 gattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacga---cgacacatatgattacactgaataatgtgattttct 17831572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 19324612 - 19324580
Alignment:
Q  211 cacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttct 19324580  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 21038161 - 21038101
Alignment:
Q  183 gtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||| ||||||||  || |||||  |||||||||||||||| |||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttct 21038101  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 36878519 - 36878479
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| |||| |||| ||||||||||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttct 36878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 37598931 - 37598883
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||||  || |||||| |||||||||| |||||||    
T  37598931 ctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccg 37598883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 38078620 - 38078668
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||| ||||  | |||||||||||||| |||||||    
T  38078620 ctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccg 38078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 40181971 - 40181923
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||||||||  ||||| |||| ||||| |||||||    
T  40181971 ctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccg 40181923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 52284809 - 52284765
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||| ||||||  |||| |||||||||||||||||||||||||    
T  52284809 gattagacgtgtcttggtgtcggacatgtgtcgtgtctgacaccg 52284765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 24339753 - 24339662
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||||| ||||||||| |||| | || ||||||||||||||||||||||    
T  24339753 ctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttt 24339662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 32308231 - 32308138
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||  ||||| ||||| |||||||||||||||||  |||||| ||||||||  ||||||| | ||||||||||||||||||||||||    
T  32308231 ctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttct 32308138  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 26033409 - 26033500
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| ||||| ||||  |||||| ||||| |||||||||||| ||||| ||| |||| | || ||||||||||||||||||||||    
T  26033409 ctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgatttt 26033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 598309 - 598260
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  598309 tctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccg 598260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 26329354 - 26329423
Alignment:
Q  174 cggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| |||||||||||||||||| |||||| || ||||||||| |||||||||||| |||| ||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttct 26329423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 43027424 - 43027508
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||||| |||||| |||||||||||||      ||||||||| |||| | || |||||||| |||||||||||||    
T  43027424 tcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctga------cacgacaccgacacttgtatttacactgcattatgtgatttt 43027508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 7438812 - 7438726
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||  ||| || ||||||||||||| |||||||| || |||||| |||| | || ||||| ||||||||||||||||    
T  7438812 attaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgatttt 7438726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 15902928 - 15902842
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||| |||||||| |||  ||| ||||||||||||| || |||| ||| ||||| ||||||||| ||||||| ||||||||||||||    
T  15902928 attaagcgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 21880253 - 21880204
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  21880253 tctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccg 21880204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 5409790 - 5409875
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||| |||||||||      ||| ||||||||| |||| | || || |||||||||||||||||||    
T  5409790 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 2334360 - 2334270
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||| |||||  | ||| ||||||||||||||||| |||| || ||||||||| |||| | || ||||||| ||||||||||||||    
T  2334360 ctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaattatgtgatttt 2334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 17307954 - 17307911
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  17307954 cacgacaccaacacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 21560610 - 21560523
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||  |||||   ||||||| |||||| ||||||||  |||||||| |||| | || ||||||||||||||||||||||    
T  21560610 gattaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttt 21560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 22602708 - 22602751
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  22602708 cacgacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 9408283 - 9408373
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||   |||| |||| || | |||||||||||||||  |||||||| |||| | || ||||||| ||||||||||||||    
T  9408283 tcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttt 9408373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 33994309 - 33994264
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||    
T  33994309 ggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccg 33994264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 8160485 - 8160434
Alignment:
Q  192 gacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||| ||||||||||||| ||||||| |||||||| |||||||    
T  8160485 gacaccgacacgataccaacacatataattacactaaattatgtaattttct 8160434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 19206163 - 19206068
Alignment:
Q  148 ctctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| |||||| ||| | |||||| | || ||||||| | |||||||||  || |||||| ||||||||| ||| | ||||||||||||||||||    
T  19206163 ctctcagattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttct 19206068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 27229259 - 27229350
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||| |||||||||||||  ||| || ||| || ||||||||||||  | ||||||||| | || |||| ||||||| ||||||||||||||    
T  27229259 ctcgaattaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 35297670 - 35297713
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  35297670 cacgacaccaacacatataattataatgaattatgtgattttct 35297713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 640171 - 640134
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattt 240  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 6630864 - 6630953
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| |||||  |||| ||| || |||| ||||| ||||||  ||||||| | ||||||||| ||||||||||||| |||| |||||    
T  6630864 gattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttct 6630953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 8090025 - 8090066
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||    
T  8090025 cgacaccaacacatacagttacactgaattacgtgatattct 8090066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 9482993 - 9482952
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| |||||||||||| |||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 11665406 - 11665479
Alignment:
Q  168 cggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||| |||||| |||||||||  ||||||| || |||| | |||| |||| ||| ||||||||||||||||||    
T  11665406 cggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgatttt 11665479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 15836447 - 15836488
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgaca 195  Q
    |||||||||||||| ||||||||| |||||||||||| ||||    
T  15836447 gattaggcgtgtcctggtgccggatatgtgtcgtgtccgaca 15836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 17851482 - 17851449
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  17851482 acacatataattacactgaattatgtgattttct 17851449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 18213033 - 18213074
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  18213033 cgacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 20549850 - 20549809
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttct 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 22868093 - 22868060
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  22868093 acacatataattacactgaattatgtgattttct 22868060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 32287463 - 32287504
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| || |||||||||||||||||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttct 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 39138503 - 39138462
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||    
T  39138503 cgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 5835305 - 5835265
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 18039067 - 18039019
Alignment:
Q  193 acaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||| ||||||||| |||| | || ||||||||||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttt 18039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 7677816 - 7677725
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||| |||| | || || |||||||||||||||||||    
T  7677816 ctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgatttt 7677725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 21522858 - 21522770
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||  | || |||||||||||||||| |||||    
T  21522858 ggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttt 21522770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 21533424 - 21533336
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||  | || |||||||||||||||| |||||    
T  21533424 ggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttt 21533336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 21814369 - 21814279
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| ||||||||||| ||||| |||| |||||||||| ||||||| ||||||||| ||||||||| |||||||| ||| |||||||||||    
T  21814369 ggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 21542138 - 21542056
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgt 235  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||| ||||||||| |||| | || ||||||||||||||||    
T  21542138 ggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 39698652 - 39698561
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||| ||||| |||| |  ||||||||| ||||||| ||||||||  |||| | || ||||||||||||||||||||||    
T  39698652 ctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgatttt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 19579812 - 19579719
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||||||||||||   ||||| ||||||||| ||||| | ||||||||| |||| | || || |||| ||||||||||||||||    
T  19579812 ctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 6401606 - 6401516
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| |||||| |||| ||| | |||| |||||||||| ||||| | ||||||||| ||||||||| |||||||| ||| |||||||||||    
T  6401606 ggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgattttct 6401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 3966614 - 3966521
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||| ||||||||  ||  |||||  ||| ||||| ||||| | ||||||||| ||||||||| |||||||||||| |||||||||||    
T  3966614 ctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 15382585 - 15382545
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtc 190  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  15382585 ctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc 15382545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 6471887 - 6471930
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  6471887 cacgacacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 30098437 - 30098344
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| |||||| |||| | |||| |||||||||| ||||| | | ||| ||| |||  |||| ||||| ||||||||||||||||||    
T  30098437 ctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttct 30098344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 30183661 - 30183572
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    ||||| |||||||||||||| ||| |||||| ||||||||||||| |||  ||||||||| |||| | || ||| || |||| |||||||    
T  30183661 tctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgat 30183572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 37328826 - 37328883
Alignment:
Q  184 tcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||| ||||||| ||||||||| |||||| || |||||||||||| |||||||||    
T  37328826 tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttt 37328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 41091255 - 41091298
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  41091255 cacgacatcgacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 13287397 - 13287438
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||| |||| | |||||||||||||||||||||||||    
T  13287397 cacgacaccgacacttgtagttacactgaattatgtgatttt 13287438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 28588674 - 28588715
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| |||| |||| ||||||||||||||||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttct 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 30502350 - 30502395
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  30502350 ggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccg 30502395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 30502388 - 30502429
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 30542693 - 30542738
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  30542693 ggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccg 30542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 30542731 - 30542772
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 39758323 - 39758290
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  39758323 acacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 43564982 - 43564933
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||||||| | ||||||  ||||||||| |||||||    
T  43564982 tctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccg 43564933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 6035558 - 6035510
Alignment:
Q  185 cgtgtctgacaccgccacgacaccaacacatatagttacactgaattat 233  Q
    |||||||| ||||| ||||||||| ||| ||||| ||||||||||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattat 6035510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 21191015 - 21191063
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||||| | |||||| |||| ||||| |||||||    
T  21191015 ctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccg 21191063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 21194082 - 21194122
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtc 190  Q
    ||||||||||||||| ||||||| | |||||||||||||||    
T  21194082 ctcggattaggcgtgccccggtgtctgacatgtgtcgtgtc 21194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  211 cacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  211 cacatatagttacactgaattatgtgattttct 243  Q
    |||||||| ||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 16766807 - 16766717
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||||| |||| | || ||||||||||||||||||||||    
T  16766807 tcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttt 16766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 18367944 - 18367854
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| ||||||||||| ||| | ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| |||||||||||    
T  18367944 ggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 18367854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 10339077 - 10339167
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagtt-acactgaattatgtgattttct 243  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| |||| |||  ||||||||| || ||||||||||||||||||||||    
T  10339077 gattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgattttct 10339167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 16488541 - 16488631
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| ||||||||||| ||||| |||| |||||||||| ||||||| ||||||||| ||||||||| |||||||| ||| |||||||||||    
T  16488541 ggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 5970056 - 5970147
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||| ||||||||||| || |||| |||||||||||| ||||||| ||||||||| |||  | || ||||||||||||||||||||||    
T  5970056 ctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttt 5970147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 8714091 - 8714000
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||| ||||||||||| || |||| |||||||||||| ||||||| ||||||||| |||  | || ||||||||||||||||||||||    
T  8714091 ctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttt 8714000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 8365467 - 8365555
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    ||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||||||| |||| | || |||||| ||||||||||||    
T  8365467 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgat 8365555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 7248469 - 7248379
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    |||||||| | |||||||||||| ||||||  ||| |||||  |||||| |||||| |||||||||||| |||| ||||||||||||||||    
T  7248469 ctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaattatgtgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 26562776 - 26562707
Alignment:
Q  174 cggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||| |||||  ||||||| ||||||| | ||||||||| ||||||||||||||||||||||||    
T  26562776 cggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttct 26562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 5000575 - 5000667
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||||||| || |||||  ||| ||| | ||| ||||||| ||||||||||||    
T  5000575 tcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 5000667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 9522999 - 9522911
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||| ||||| |||||| ||||||  || ||||||| ||| ||||| |||| | || ||||||||||||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttt 9522911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 9107318 - 9107409
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| ||||||||||| ||||||   || ||||| ||||||| ||||||||| |||| | || |||||||||||| |||||||||    
T  9107318 ctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgatttt 9107409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 9617510 - 9617452
Alignment:
Q  185 cgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  9617510 cgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 17327609 - 17327696
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||| | |||| |||||||||| |||||      |||||  ||||||||||||||||| ||||||||||||||||    
T  17327609 ctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac------gacactgacacatatagttacactaaattatgtgattttct 17327696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 4388162 - 4388103
Alignment:
Q  184 tcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||||||||||  ||||||||| |||| ||| |||||||||||||||    
T  4388162 tcgtgtcagacaccgccacgacactgacacatataattaccctggattatgtgattttct 4388103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 9025492 - 9025535
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  9025492 cacgacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 7151474 - 7151432
Alignment:
Q  199 ccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  7151474 ccacgacaccaacacatataattacacttaattatgtgatttt 7151432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 7265593 - 7265634
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 9629494 - 9629401
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||| |||||| | ||| ||||||  ||| ||||| |||||  |  ||||||| ||||||||| ||||| ||||||||||||||||||    
T  9629494 ctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacacgacaccgacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 32511666 - 32511707
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttct 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 32978861 - 32978906
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||    
T  32978861 ggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccg 32978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 8931579 - 8931643
Alignment:
Q  179 atgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||  |||||||||| ||||||| | ||||||||| ||| |||||||||||| |||||||    
T  8931579 atgtgtcgcatctgacaccgacacgacatcgacacatataattatactgaattatgttattttct 8931643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 28152198 - 28152150
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||| |||||||||| |||||| |||||||||| |||||||    
T  28152198 ctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccg 28152150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 31385027 - 31384940
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||  ||||| ||||||||||  ||| |  ||||||||  |||| | || ||||||||||||||||||||||    
T  31385027 ggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaattatgtgatttt 31384940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 7027301 - 7027262
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 20576615 - 20576674
Alignment:
Q  184 tcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| |||||| || |||||||||||||| |||| |||||||||||||||  |||||||    
T  20576615 tcgtgcctgacatcgacacgacaccaacacttataattacactgaattatgcaattttct 20576674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 32313517 - 32313422
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtc-gtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||| | |||||||||||  ||||||  ||| ||||||||||||| ||||||||| ||||||||| || || ||||| |||| |||||||    
T  32313517 tctcgggttaagtgtgtcccggtgttggacatacgtcagtgtctgacaccgacacgacacccacacatataattgcattgaatcatgttattttct 32313422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 34073337 - 34073388
Alignment:
Q  192 gacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| ||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttct 34073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 7378038 - 7377997
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 11591878 - 11591911
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  11591878 acacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 19040403 - 19040370
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  19040403 acacatataattacactgaattatgtgattttct 19040370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 28715396 - 28715347
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||| |||||||||||||||||| || ||| |||||||||| |||||||    
T  28715396 tctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccg 28715347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 4878042 - 4877995
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||| | || ||||||||||||||||| |||||||    
T  4878042 ctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccg 4877995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 13360373 - 13360413
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| | ||||||| ||||||||||||||||||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 17168954 - 17168914
Alignment:
Q  201 acgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||| |||||||||||||||| |||||||||| |||||    
T  17168954 acgacacaaacacatatagttacattgaattatgtcatttt 17168914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 34595234 - 34595186
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||| ||||||||||| | |||| |||||||||| |||||||    
T  34595234 ctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccg 34595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 34868753 - 34868825
Alignment:
Q  169 ggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| |||| || ||  |||| | |||||||| || ||||||| ||||||||||||||||| ||||    
T  34868753 ggtgccggacacgtgttgtatccaacactgacacgacactaagacatataattacactgaattatgtggtttt 34868825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 241706 - 241614
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||||  ||||||||| ||||  ||| ||||||| ||||||||||||||    
T  241706 tctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttt 241614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 29447551 - 29447467
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||| | |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  29447551 gattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 11803370 - 11803277
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||| ||||| || ||| |||||||||||||| ||  |||||  ||| ||||||||||||||| ||||||||||||||||||||||||    
T  11803370 ctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaattatgtgattttct 11803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 15816076 - 15816168
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||||||| ||||   |||||||||| ||||||  ||||||||| |||| |||| ||||||| ||||||||||||||    
T  15816076 tctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgatttt 15816168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 26902131 - 26902216
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||||| |||| |||||||||| |||||    |||||||| ||||||||| ||||||||||||||||||||||||    
T  26902131 aggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 22652087 - 22651996
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||| |||||||||||| ||||||  ||||||||| ||||||| ||||||||| |||| | || ||| | ||||||||||||||||    
T  22652087 ctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgatttt 22651996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 11927035 - 11927125
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||| || ||  ||| |  |||||||| |||||||  ||||||||| ||||||||| ||||||||||||||||||||||    
T  11927035 tcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 11944775 - 11944685
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||| ||||| |||| |  |||||||| ||||| |  ||||||||| ||||||||| ||||||||| ||||||||||||    
T  11944775 tcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagttatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 29447061 - 29447151
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||| |||| | ||||  ||||||||| ||||||| || |||||| |||| | |||||||| ||||||||||||||||||    
T  29447061 ggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttct 29447151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 29510252 - 29510343
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| ||||||||||| |||||| | |||||||| ||||||| ||| ||||| |||| | || ||| |||||||| |||||||||    
T  29510252 ctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgatttt 29510343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 8343426 - 8343336
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    |||||||  |||| | || ||||||| ||||||||||||||    
T  8343426 tcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgatttt 8343336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 12570461 - 12570549
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||| |||| |||||| |||| |||||||||||||  || ||| | ||||||||| ||||||| ||||||||| ||||||    
T  12570461 gattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac-acatcgacacatataattacacttaattatgtgtttttct 12570549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 12570687 - 12570775
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||| |||| |||||| |||| |||||||||||||  || ||||||||| ||||| ||||||| ||||||| | ||||||    
T  12570687 gattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatac-acaccaacatatataattacacttaattatgcgtttttct 12570775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 31557093 - 31557048
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccg 31557048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 24362167 - 24362239
Alignment:
Q  168 cggtgccggacatgtgtcgtgtctg-acaccgccacgacaccaacacatatagttacactgaattatgtgatt 239  Q
    |||||||||||| |||||||||| | |||||| |||||||   ||||||||| ||||||||||||||||||||    
T  24362167 cggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgatt 24362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 44462154 - 44462202
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  44462154 ctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccg 44462202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 44469687 - 44469735
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  44469687 ctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccg 44469735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 2572016 - 2572095
Alignment:
Q  162 gtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||  |||||| |||||||||| ||||| | ||||||||| |||| | || ||||||| ||||||||||||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgatttt 2572095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 4786338 - 4786379
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttct 4786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 28384967 - 28385032
Alignment:
Q  176 gacatgtgt-cgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    ||||||||| |||||||||||| | || |||||| ||||||||| ||||||||||||||| |||||    
T  28384967 gacatgtgtacgtgtctgacactgacatgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 22943308 - 22943348
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtc 190  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  22943308 ctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 5813687 - 5813644
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||| |||||| |||||||||| |||||||    
T  5813687 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccg 5813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 24205767 - 24205834
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatat 217  Q
    |||||||||||||||| |||||| | |||||| || ||||  ||||||| ||| ||||||||||||||    
T  24205767 ctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacacaacaccaacacatat 24205834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattt 240  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 21465518 - 21465432
Alignment:
Q  155 attaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||| |||| |||  ||||| |||||||||| ||||| | |||||||||||||| | || |||||  ||||||| |||||||    
T  21465518 attaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgatttt 21465432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 28745596 - 28745522
Alignment:
Q  163 tgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtga 237  Q
    |||| ||||| |||||| |||||||||| ||||||| ||||||| | |||  | |||||||| ||||||||||||    
T  28745596 tgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtga 28745522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 13844596 - 13844637
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttct 13844637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 34897136 - 34897103
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  34897136 acacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 2035848 - 2035758
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttc 242  Q
    ||||||||||| || |||||||| |||||| | |||| ||||||||||| ||||| | | |||| |||| ||||||||||| |||| ||||||    
T  2035848 ctcggattaggtgtctcccggtgtcggacacgcgtcg-gtctgacaccggcacgata-cgacacctataattacactgaataatgttattttc 2035758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 14134757 - 14134717
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttct 14134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 14134799 - 14134751
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||| ||||||||||||| |||| |||||| ||||||||| ||||||||    
T  14134799 ctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccg 14134751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 36934730 - 36934690
Alignment:
Q  201 acgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||| |||||||||||| ||||| ||||||||||||||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgatttt 36934690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 9695 - 9788
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||  ||||||||| || | |||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||||| ||||||||||    
T  9695 ctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgattttct 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 3797 - 3888
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||| || || ||||||||||||||||| ||||||  ||||||||  |||| | || ||||||||||||||||||||||    
T  3797 ctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttt 3888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 53280 - 53198
Alignment:
Q  161 cgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||| |||||| ||||| |||| ||||||| |||| |||| |||| |||| ||||||||||||||||||||||||    
T  53280 cgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttct 53198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 263320 - 263413
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||||||  |||  || ||| |||||||||||||||||| ||||||||  |||| |||| ||||||||||||||||| ||||||    
T  263320 ctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttct 263413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 34784938 - 34785023
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||| | |||| |||||||||| || |||| ||||||||| ||||||||| ||||||| ||||||||||||||||    
T  34784938 aggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttct 34785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 35056975 - 35056886
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||  | ||| |||||| |||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| || ||||||    
T  35056975 gattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatatggttttct 35056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 37419854 - 37419763
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||||||| |||||| |  ||||||| ||||||| |||||||||  ||| | || |||||||||||| |||||||||    
T  37419854 ctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgatttt 37419763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 44860431 - 44860338
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| |||||| |||||||| || ||||||  |||||||||  |||||  ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  44860431 ctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 2438678 - 2438726
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  2438678 ctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccg 2438726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 18840972 - 18841020
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18840972 ctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccg 18841020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 36096331 - 36096416
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||| | |||| |||||||||| |||| || ||||||||| ||| ||||| |||||||| ||| |||||||||||    
T  36096331 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgattttct 36096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 30717481 - 30717569
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||| |||| ||| || ||| |||||||||| |||| || ||||||| | |||| | || ||||||||||||||||||||||    
T  30717481 ggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgatttt 30717569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 4882644 - 4882727
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattat 233  Q
    |||| |||||| |||| | |||||| ||||||| ||||||||||||||| ||||||| | |||| | || ||||||||||||||    
T  4882644 ctcgaattaggtgtgttcaggtgcccgacatgtatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattat 4882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 11223816 - 11223902
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||||||||||||| | |||| |||||||||| ||||||  || |||||| |||| | || |||||||||||||||| |||||    
T  11223816 gattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttatttt 11223902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 15657975 - 15657884
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||| |||||||||||||| | |||||| |||||| ||| |||| |  ||||||||| |||  | || ||||||||||||||||||||||    
T  15657975 ctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattatgtgatttt 15657884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 36756295 - 36756382
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    |||||||||||||  ||||| ||||||||||| ||||  |||||   ||||||||| |||| |||| |||||||||||||||| ||||    
T  36756295 ggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttattt 36756382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 18622667 - 18622626
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  18622667 cacgacaccaacacgtataattacactgaattatgtgatttt 18622626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 20242727 - 20242768
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 18054784 - 18054844
Alignment:
Q  183 gtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||| | | |||||||||||    
T  18054784 gtcgtgttcgacaccgacacgacaccaacacatataattacactgcagtttgtgattttct 18054844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 18889544 - 18889632
Alignment:
Q  156 ttaggcgtgtcccggtgccggacatgtgtcg-tgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||| |||||| |||| |||||||| |||| |||| |||||   || |||||| ||||||||  ||||||||||||||||||||||||    
T  18889544 ttaggtgtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 2331900 - 2331812
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||| |||| | |||| |||  ||| | ||||| | ||||||||| ||||||| |  |||||||||||||||||||||||    
T  2331900 ggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacacataaa--tacactgaattatgtgattttct 2331812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 26769622 - 26769559
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacac 213  Q
    ||||||||||||||||||| ||| |||||| |||||||||| || |||| || |||||| ||||    
T  26769622 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacac 26769559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 27286253 - 27286328
Alignment:
Q  163 tgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgat 238  Q
    |||||||||| ||||||||||||||||| |||| || || ||||   |||| |||| ||||||| |||||||||||    
T  27286253 tgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgat 27286328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 28524538 - 28524447
Alignment:
Q  149 tctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattt 240  Q
    |||| ||||||||||||  | ||| | |||| |||| ||||| ||||||  ||| ||| | ||||||||| |||||||||||||||||||||    
T  28524538 tctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 38117118 - 38117165
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacacc 197  Q
    ||||||||||||||||||||||| |||||| |||| ||||| ||||||    
T  38117118 ctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 5367251 - 5367213
Alignment:
Q  202 cgacaccaacacatatagttacactgaattatgtgattt 240  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 5367289 - 5367244
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    |||||||||||||||||| | |||| |||||||||||| |||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccg 5367244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 21616813 - 21616780
Alignment:
Q  210 acacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttct 21616780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 24975309 - 24975366
Alignment:
Q  186 gtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| | ||||||||| || |||||| ||||||||||||||  ||||||||    
T  24975309 gtgtctgacacggacacgacaccgacgcatatatttacactgaattatacgattttct 24975366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 32749781 - 32749866
Alignment:
Q  158 aggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||| ||| ||||||  ||||  ||| |||| || ||||||||  |||| |||  ||||||||||||||||||||||||    
T  32749781 aggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaattatgtgattttct 32749866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 38355888 - 38355928
Alignment:
Q  203 gacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||||||||| | ||||||||||||||||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 42511341 - 42511408
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatata 218  Q
    |||||||||| |||||||| ||| |||||| |||| ||||| ||||| |  ||||||||||||||||||    
T  42511341 ctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga-acgacaccaacacatata 42511408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 44486 - 44566
Alignment:
Q  163 tgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||| |||||| |||| |||||  |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  44486 tgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 3039 - 2948
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||||||||| |||||| || ||| ||||||||||||| |||| ||||||||  | || | || ||||||| ||||||||||||||    
T  3039 ctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttt 2948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 71836 - 71745
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||||||| |||||||||||| |||||| |||| ||||| ||||||| ||||||||  ||||   || |||||||||||| |||||||||    
T  71836 ctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgatttt 71745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 137880 - 137798
Alignment:
Q  161 cgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||| ||||| |||||||||  |||||| ||||| | ||||||||||||||||||   ||||||||||| |||||||||||    
T  137880 cgtgtctcggtgtcggacatgtaccgtgtccgacactgacacgacaccaacacatatgactacactgaattgtgtgattttct 137798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 135310 - 135353
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||    
T  135310 cacgacaccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 5947 - 6037
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||| ||||||||| | ||| | |||| |||||||||  |||||||  |||||||| ||||||||| |||||||| ||| |||||||||||    
T  5947 ggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgattttct 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 23619 - 23531
Alignment:
Q  153 ggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    |||||| ||||||||| ||  ||||||  | ||||||| |||||||  |||||||  |||| |||| ||||||||||||||||||||||    
T  23619 ggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 23481 - 23440
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  23481 cacgacaccgacacttataattacactgaattatgtgatttt 23440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 4840 - 4879
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgt 189  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  4840 ctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 99954 - 99911
Alignment:
Q  200 cacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||    
T  99954 cacgacaccaacacatataattacattgaattatgttattttct 99911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 92922 - 92875
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacacc 197  Q
    |||||||||||||||||| |||| | ||||||||||||||| ||||||    
T  92922 ctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 21119 - 21061
Alignment:
Q  185 cgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    |||||||||||||| ||||| ||| ||||||||| ||| || || ||||||||||||||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttct 21061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 1120 - 1055
Alignment:
Q  176 gacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgatttt 241  Q
    ||||| ||| |||||  |||||| ||| ||||  |||||||||||||||||||||||||| |||||    
T  1120 gacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaatttt 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 421 - 469
Alignment:
Q  150 ctcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||| ||||||||||| |||||| | |||||||| |||||||    
T  421 ctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccg 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 8894 - 8850
Alignment:
Q  154 gattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccg 198  Q
    ||||||||||||| ||||| |||||| |||||||||| |||||||    
T  8894 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccg 8850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 84922 - 85014
Alignment:
Q  151 tcggattaggcgtgtcccggtgccggacatgtgtcgtgtctgacaccgccacgacaccaacacatatagttacactgaattatgtgattttct 243  Q
    ||||||||||||||||| | || |||||| |||| ||||  |||| || || |||||| ||| ||||| ||||||  |||||| |||||||||    
T  84922 tcggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttct 85014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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